BLASTX nr result

ID: Ophiopogon22_contig00029508 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00029508
         (487 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020265529.1| zinc finger CCCH domain-containing protein 3...   103   4e-23
ref|XP_020265528.1| zinc finger CCCH domain-containing protein 3...   103   5e-23
ref|XP_020265527.1| zinc finger CCCH domain-containing protein 3...   103   5e-23
ref|XP_020270823.1| zinc finger CCCH domain-containing protein 3...    63   1e-08
ref|XP_018686586.1| PREDICTED: zinc finger CCCH domain-containin...    57   2e-06
ref|XP_009418524.1| PREDICTED: zinc finger CCCH domain-containin...    57   2e-06

>ref|XP_020265529.1| zinc finger CCCH domain-containing protein 33-like isoform X3
           [Asparagus officinalis]
          Length = 436

 Score =  103 bits (258), Expect = 4e-23
 Identities = 47/80 (58%), Positives = 59/80 (73%), Gaps = 4/80 (5%)
 Frame = -1

Query: 487 CKYDHPLMGYYNYAVPTLSAPAPTVFFPPNQRNVPQVMWASATETS----LKLPDRIRKS 320
           CKYDHPLMG+YNYA+PT S P P+  FPPN  N PQV WASA+E S    L+LPDR++KS
Sbjct: 328 CKYDHPLMGFYNYAMPTYSVPDPSALFPPNHSNSPQVTWASASEASFSKTLRLPDRLQKS 387

Query: 319 DETNNTGAKAETVNNDEHIN 260
           DE NN  A A + +N++ +N
Sbjct: 388 DEKNNKEANATSHDNNDRVN 407


>ref|XP_020265528.1| zinc finger CCCH domain-containing protein 3-like isoform X2
           [Asparagus officinalis]
          Length = 438

 Score =  103 bits (258), Expect = 5e-23
 Identities = 47/80 (58%), Positives = 59/80 (73%), Gaps = 4/80 (5%)
 Frame = -1

Query: 487 CKYDHPLMGYYNYAVPTLSAPAPTVFFPPNQRNVPQVMWASATETS----LKLPDRIRKS 320
           CKYDHPLMG+YNYA+PT S P P+  FPPN  N PQV WASA+E S    L+LPDR++KS
Sbjct: 330 CKYDHPLMGFYNYAMPTYSVPDPSALFPPNHSNSPQVTWASASEASFSKTLRLPDRLQKS 389

Query: 319 DETNNTGAKAETVNNDEHIN 260
           DE NN  A A + +N++ +N
Sbjct: 390 DEKNNKEANATSHDNNDRVN 409


>ref|XP_020265527.1| zinc finger CCCH domain-containing protein 33-like isoform X1
           [Asparagus officinalis]
 gb|ONK70266.1| uncharacterized protein A4U43_C05F31960 [Asparagus officinalis]
          Length = 454

 Score =  103 bits (258), Expect = 5e-23
 Identities = 47/80 (58%), Positives = 59/80 (73%), Gaps = 4/80 (5%)
 Frame = -1

Query: 487 CKYDHPLMGYYNYAVPTLSAPAPTVFFPPNQRNVPQVMWASATETS----LKLPDRIRKS 320
           CKYDHPLMG+YNYA+PT S P P+  FPPN  N PQV WASA+E S    L+LPDR++KS
Sbjct: 346 CKYDHPLMGFYNYAMPTYSVPDPSALFPPNHSNSPQVTWASASEASFSKTLRLPDRLQKS 405

Query: 319 DETNNTGAKAETVNNDEHIN 260
           DE NN  A A + +N++ +N
Sbjct: 406 DEKNNKEANATSHDNNDRVN 425


>ref|XP_020270823.1| zinc finger CCCH domain-containing protein 3-like [Asparagus
           officinalis]
 gb|ONK78978.1| uncharacterized protein A4U43_C01F1620 [Asparagus officinalis]
          Length = 432

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
 Frame = -1

Query: 487 CKYDHPLMGYYNYAVPTLSAPAPTVFFPPNQRNVP-QVMWASATET----SLKLPDRIRK 323
           CK+DHP+MG Y+YA+P          FP +Q N+P QV WAS  E     + KL D+I+K
Sbjct: 341 CKFDHPVMGSYDYAMP--------AHFPSSQSNLPLQVTWASTPEAPSSKTSKLTDQIKK 392

Query: 322 SDETNNTGAKAETVNNDEHI 263
           S E NN      + N +EH+
Sbjct: 393 SSEKNNVEENVASDNQNEHV 412


>ref|XP_018686586.1| PREDICTED: zinc finger CCCH domain-containing protein 3 isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 425

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
 Frame = -1

Query: 487 CKYDHPLMGYYNYAVPTLSAPAPTVFFPPNQRNVPQVMWASATETSLK---LPDRIRKSD 317
           CK+DHPL+GYY Y++P  + P     F PNQR++ QV+W SA  +S K   LPD++  S+
Sbjct: 338 CKFDHPLVGYYGYSLPPFTYPGQPALF-PNQRSL-QVIWTSAGNSSSKSSNLPDQLAISE 395

Query: 316 ETNNTGAKAETVNNDEHIN 260
           +    G   +     EH N
Sbjct: 396 K----GGAQQNPQTHEHGN 410


>ref|XP_009418524.1| PREDICTED: zinc finger CCCH domain-containing protein 3 isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 427

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
 Frame = -1

Query: 487 CKYDHPLMGYYNYAVPTLSAPAPTVFFPPNQRNVPQVMWASATETSLK---LPDRIRKSD 317
           CK+DHPL+GYY Y++P  + P     F PNQR++ QV+W SA  +S K   LPD++  S+
Sbjct: 340 CKFDHPLVGYYGYSLPPFTYPGQPALF-PNQRSL-QVIWTSAGNSSSKSSNLPDQLAISE 397

Query: 316 ETNNTGAKAETVNNDEHIN 260
           +    G   +     EH N
Sbjct: 398 K----GGAQQNPQTHEHGN 412


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