BLASTX nr result

ID: Ophiopogon22_contig00028490 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00028490
         (842 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004524921.1| extensin-2-like [Ceratitis capitata]               61   5e-07
ref|XP_002953225.1| hypothetical protein VOLCADRAFT_63308 [Volvo...    60   1e-06
ref|XP_021858275.1| nascent polypeptide-associated complex subun...    59   3e-06

>ref|XP_004524921.1| extensin-2-like [Ceratitis capitata]
          Length = 338

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 50/168 (29%), Positives = 68/168 (40%), Gaps = 12/168 (7%)
 Frame = +3

Query: 15  PNPSYKPQFTSLFPSDPTRQ-------PTAHQPPRPHCSIPFEPSPQAHGKPSPAPLPFG 173
           P P Y PQ    +   P          PT HQP          P+ + HG PSPAP P  
Sbjct: 133 PAPVYGPQLPDAYAPHPAPAYGSHQLPPTYHQP----------PAAKYHGAPSPAPAPSS 182

Query: 174 THSTKPQTDPHLSLNPSTRTPSTKLIEHLSSTTPASDPHRGAPRPVSLFAHVVFDSSK*E 353
           + S  PQ  P  +  P   TP+T  +    +  PA  P   AP P S +AH    + +  
Sbjct: 183 SPSYHPQ-PPAPAPAPVYPTPATTPVPVYRTPAPAPAPAYHAPHPASDYAHPPVYAHR-Y 240

Query: 354 LTHETRPCRSDH-----GGYRGPLPEGLIQPPDSNCTSRSCQEVRASP 482
            ++E RP   DH     G Y GP P      P  + +  S +  + +P
Sbjct: 241 SSYEHRPSAYDHHTPSYGYYSGPTPAPRYHAPSPHSSYSSYKPSKPAP 288


>ref|XP_002953225.1| hypothetical protein VOLCADRAFT_63308 [Volvox carteri f.
           nagariensis]
 gb|EFJ45824.1| hypothetical protein VOLCADRAFT_63308, partial [Volvox carteri f.
           nagariensis]
          Length = 437

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 53/164 (32%), Positives = 64/164 (39%), Gaps = 1/164 (0%)
 Frame = +3

Query: 3   PPQHPNPSYKPQFT-SLFPSDPTRQPTAHQPPRPHCSIPFEPSPQAHGKPSPAPLPFGTH 179
           P   P+PS  P  T S  PS  T  PT  QPP P  S  F PS      PSP PLP  + 
Sbjct: 149 PSPSPSPSTPPLTTPSPSPSPSTPSPTPSQPPSPSTSPSFTPS----SSPSPTPLPSPSP 204

Query: 180 STKPQTDPHLSLNPSTRTPSTKLIEHLSSTTPASDPHRGAPRPVSLFAHVVFDSSK*ELT 359
           ST P   P  S +PS  TP +  +      TP+  P   +P P   F      S      
Sbjct: 205 STLPSPTPSPSPSPSPSTPPSPTL------TPSPSPIPFSPTPSPTFPTSTSPSPTPSPV 258

Query: 360 HETRPCRSDHGGYRGPLPEGLIQPPDSNCTSRSCQEVRASPLGS 491
             T P  +       PLP      P S   + S   + +SP  S
Sbjct: 259 PSTSP-STPPSPTPSPLPSPSPSTPPSPTLTPSPSPIPSSPTPS 301


>ref|XP_021858275.1| nascent polypeptide-associated complex subunit alpha,
           muscle-specific form-like [Spinacia oleracea]
          Length = 739

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 39/102 (38%), Positives = 48/102 (47%)
 Frame = +3

Query: 3   PPQHPNPSYKPQFTSLFPSDPTRQPTAHQPPRPHCSIPFEPSPQAHGKPSPAPLPFGTHS 182
           PP+ P+PS KP  +S  P  P+  PT   PP+     P  P+P    KP+P P    T S
Sbjct: 327 PPKSPSPSPKPPTSSSPPKSPSPSPTPSSPPKSPSPSPKPPTPSPPSKPTPTP---PTQS 383

Query: 183 TKPQTDPHLSLNPSTRTPSTKLIEHLSSTTPASDPHRGAPRP 308
           T P   P  S  PS  TPST      S+  P+S P    P P
Sbjct: 384 TPP---PPSSPYPSPPTPSTP----PSNPIPSSPPSIPTPSP 418


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