BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00028430
         (467 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020244310.1| RNA polymerase sigma factor sigB isoform X3 ...   123   5e-30
ref|XP_020244309.1| RNA polymerase sigma factor sigB isoform X2 ...   123   6e-30
ref|XP_020244308.1| RNA polymerase sigma factor sigB isoform X1 ...   123   6e-30
ref|XP_008805674.1| PREDICTED: RNA polymerase sigma factor sigB ...    75   6e-13
ref|XP_010918654.1| PREDICTED: RNA polymerase sigma factor sigB ...    65   4e-09
ref|XP_010943391.1| PREDICTED: RNA polymerase sigma factor sigB-...    63   1e-08

>ref|XP_020244310.1| RNA polymerase sigma factor sigB isoform X3 [Asparagus officinalis]
          Length = 517

 Score =  123 bits (309), Expect = 5e-30
 Identities = 76/155 (49%), Positives = 81/155 (52%)
 Frame = +2

Query: 2   AVIDLDKTYVPTLEAHTTSSAVTRRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXX 181
           AVI+LDKTYVPTL+AHT SSAVTR LSYVGAIGPP+KTDYK TW                
Sbjct: 3   AVIELDKTYVPTLDAHTNSSAVTRPLSYVGAIGPPSKTDYKTTWHAETLLTREEATIAAA 62

Query: 182 XXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIFQSXXXXXXXXXXXXMMN 361
                              QMI  D  VKLEK+E FPSQA I Q               N
Sbjct: 63  AAEAVALARAAVELAKDAAQMIRKDLPVKLEKAENFPSQADIRQLKRPTLTELELLDTTN 122

Query: 362 TPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQ 466
             E    EG    NQ KDEGISSL LNE DLQ+ Q
Sbjct: 123 NQE----EGHNTPNQSKDEGISSLMLNEPDLQRMQ 153


>ref|XP_020244309.1| RNA polymerase sigma factor sigB isoform X2 [Asparagus officinalis]
          Length = 554

 Score =  123 bits (309), Expect = 6e-30
 Identities = 76/155 (49%), Positives = 81/155 (52%)
 Frame = +2

Query: 2   AVIDLDKTYVPTLEAHTTSSAVTRRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXX 181
           AVI+LDKTYVPTL+AHT SSAVTR LSYVGAIGPP+KTDYK TW                
Sbjct: 40  AVIELDKTYVPTLDAHTNSSAVTRPLSYVGAIGPPSKTDYKTTWHAETLLTREEATIAAA 99

Query: 182 XXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIFQSXXXXXXXXXXXXMMN 361
                              QMI  D  VKLEK+E FPSQA I Q               N
Sbjct: 100 AAEAVALARAAVELAKDAAQMIRKDLPVKLEKAENFPSQADIRQLKRPTLTELELLDTTN 159

Query: 362 TPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQ 466
             E    EG    NQ KDEGISSL LNE DLQ+ Q
Sbjct: 160 NQE----EGHNTPNQSKDEGISSLMLNEPDLQRMQ 190


>ref|XP_020244308.1| RNA polymerase sigma factor sigB isoform X1 [Asparagus officinalis]
 gb|ONK58877.1| uncharacterized protein A4U43_C08F650 [Asparagus officinalis]
          Length = 557

 Score =  123 bits (309), Expect = 6e-30
 Identities = 76/155 (49%), Positives = 81/155 (52%)
 Frame = +2

Query: 2   AVIDLDKTYVPTLEAHTTSSAVTRRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXX 181
           AVI+LDKTYVPTL+AHT SSAVTR LSYVGAIGPP+KTDYK TW                
Sbjct: 43  AVIELDKTYVPTLDAHTNSSAVTRPLSYVGAIGPPSKTDYKTTWHAETLLTREEATIAAA 102

Query: 182 XXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIFQSXXXXXXXXXXXXMMN 361
                              QMI  D  VKLEK+E FPSQA I Q               N
Sbjct: 103 AAEAVALARAAVELAKDAAQMIRKDLPVKLEKAENFPSQADIRQLKRPTLTELELLDTTN 162

Query: 362 TPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQ 466
             E    EG    NQ KDEGISSL LNE DLQ+ Q
Sbjct: 163 NQE----EGHNTPNQSKDEGISSLMLNEPDLQRMQ 193


>ref|XP_008805674.1| PREDICTED: RNA polymerase sigma factor sigB [Phoenix dactylifera]
          Length = 566

 Score = 75.5 bits (184), Expect = 6e-13
 Identities = 52/155 (33%), Positives = 68/155 (43%)
 Frame = +2

Query: 2   AVIDLDKTYVPTLEAHTTSSAVTRRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXX 181
           AVID+ +  +P+LEAH+TS   TR L+YVGA+GPP KT  +AT  T              
Sbjct: 49  AVIDIQR--IPSLEAHSTSLDATRPLTYVGAVGPPMKTSIEATLATETLLTGEEAVIAAA 106

Query: 182 XXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIFQSXXXXXXXXXXXXMMN 361
                              Q+IGND SVKLEKSE F S+A  F+               N
Sbjct: 107 AAEAVALARAAVEVAKDAAQIIGNDPSVKLEKSEDFSSEADAFRLERVRLTEMELIRTTN 166

Query: 362 TPETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQ 466
                  E     +  +   +S+L   EL+ QQ Q
Sbjct: 167 NSTPTDTEPHEAKDPSQGTDVSNLTHKELESQQMQ 201


>ref|XP_010918654.1| PREDICTED: RNA polymerase sigma factor sigB [Elaeis guineensis]
          Length = 566

 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 53/158 (33%), Positives = 72/158 (45%), Gaps = 3/158 (1%)
 Frame = +2

Query: 2   AVIDLDKTYVPTLEAHTTSSAVTRRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXX 181
           AVID+ +  +P+LEA + S   TR L+YVG++GPP KT  +AT  T              
Sbjct: 49  AVIDIQR--IPSLEARSNSLDDTRPLTYVGSVGPPMKTGIEATLATETLLTGEEAVVAAA 106

Query: 182 XXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIF--QSXXXXXXXXXXXXM 355
                              Q+I ND SVKLEKSE F S+A  F  +              
Sbjct: 107 AAEAVALARAAVEVAKDAAQIIRNDPSVKLEKSEDFSSEADAFWLERVRHNEMGLIRTTH 166

Query: 356 MNTP-ETDHQEGRTNSNQFKDEGISSLRLNELDLQQTQ 466
            +TP +T+  E +  S   +D  +S+L  NEL  QQ Q
Sbjct: 167 HSTPTDTEPHEAKDPS---QDIDVSNLTNNELQSQQMQ 201


>ref|XP_010943391.1| PREDICTED: RNA polymerase sigma factor sigB-like [Elaeis
           guineensis]
          Length = 555

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 51/153 (33%), Positives = 67/153 (43%)
 Frame = +2

Query: 2   AVIDLDKTYVPTLEAHTTSSAVTRRLSYVGAIGPPAKTDYKATWPTXXXXXXXXXXXXXX 181
           AVID++  ++ +LEA +TS A TR L+YVGAIGPP KT+ +AT  T              
Sbjct: 49  AVIDME--HILSLEARSTSLAATRPLTYVGAIGPPTKTNMEATLATEALLTGEEAIIAAA 106

Query: 182 XXXXXXXXXXXXXXXXXXXQMIGNDSSVKLEKSEGFPSQAGIFQSXXXXXXXXXXXXMMN 361
                                I ND SVKLEKS  F S+A I Q                
Sbjct: 107 AAEAVALARTAVEAAKDAALTIANDPSVKLEKSLDFSSEADILQ-----------LERST 155

Query: 362 TPETDHQEGRTNSNQFKDEGISSLRLNELDLQQ 460
             +T   E     +  +D  IS+L  NEL+ Q+
Sbjct: 156 ATDTKPHEEHLAKDPSQDVDISNLIHNELEPQK 188