BLASTX nr result

ID: Ophiopogon22_contig00026394 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00026394
         (781 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_024172137.1| uncharacterized protein LOC112178184 [Rosa c...    59   4e-06

>ref|XP_024172137.1| uncharacterized protein LOC112178184 [Rosa chinensis]
          Length = 403

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 27/84 (32%), Positives = 46/84 (54%)
 Frame = +1

Query: 58  CVFCNLEEEDLIHIVLLCPCLKFFLGVL*SVFLIYHQCLKILKIGGGDWRINCVSNLSKT 237
           C  C + +E + HI  L P +K  L V+  V  + +     +++   DW ++C SNLS  
Sbjct: 177 CTLCGIGDETIEHICRLSPYVKGVLNVVSGVVRVAYS-FDAMQLNFTDWLVHCASNLSPK 235

Query: 238 LWDTLMLAFIWVVWNERNDRIFSN 309
           LW   + + +W +W ERN+R++ N
Sbjct: 236 LWAPFLFS-LWGIWRERNNRVWDN 258


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