BLASTX nr result
ID: Ophiopogon22_contig00025963
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00025963
(436 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020244074.1| RNA pseudouridine synthase 6, chloroplastic ... 136 5e-35
ref|XP_020244073.1| RNA pseudouridine synthase 6, chloroplastic ... 136 5e-35
ref|XP_008800212.1| PREDICTED: RNA pseudouridine synthase 6, chl... 89 1e-17
gb|OMO76757.1| Pseudouridine synthase, RsuA/RluB/C/D/E/F [Corcho... 84 3e-16
ref|XP_019078311.1| PREDICTED: RNA pseudouridine synthase 6, chl... 82 3e-15
ref|XP_010938616.1| PREDICTED: RNA pseudouridine synthase 6, chl... 82 3e-15
gb|KDO75507.1| hypothetical protein CISIN_1g011530mg [Citrus sin... 76 9e-14
gb|KDO75508.1| hypothetical protein CISIN_1g011530mg [Citrus sin... 76 9e-14
gb|KDO75506.1| hypothetical protein CISIN_1g011530mg [Citrus sin... 76 2e-13
ref|XP_024046026.1| RNA pseudouridine synthase 6, chloroplastic ... 76 2e-13
ref|XP_024046025.1| RNA pseudouridine synthase 6, chloroplastic ... 76 2e-13
ref|XP_006449064.1| RNA pseudouridine synthase 6, chloroplastic ... 76 2e-13
gb|KDO75505.1| hypothetical protein CISIN_1g011530mg [Citrus sin... 76 2e-13
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl... 76 2e-13
ref|XP_006449066.1| RNA pseudouridine synthase 6, chloroplastic ... 76 2e-13
ref|XP_017978576.1| PREDICTED: RNA pseudouridine synthase 6, chl... 75 4e-13
ref|XP_021294797.1| RNA pseudouridine synthase 6, chloroplastic ... 75 4e-13
ref|XP_010267715.1| PREDICTED: RNA pseudouridine synthase 6, chl... 75 8e-13
gb|PKI32736.1| hypothetical protein CRG98_046872, partial [Punic... 70 1e-12
ref|XP_007213527.1| RNA pseudouridine synthase 6, chloroplastic ... 74 2e-12
>ref|XP_020244074.1| RNA pseudouridine synthase 6, chloroplastic isoform X2 [Asparagus
officinalis]
gb|ONK61076.1| uncharacterized protein A4U43_C08F26010 [Asparagus officinalis]
Length = 496
Score = 136 bits (342), Expect = 5e-35
Identities = 80/132 (60%), Positives = 91/132 (68%), Gaps = 1/132 (0%)
Frame = -3
Query: 395 MPRISPSLASIFFSNALPPSLCRPLSTPQPLKASTFALSRALSTASPHVKSRRFMKKDLC 216
MPR S SLAS+ SN+L PSLCR S + LKA++F S ALST S HVK+RRF KDLC
Sbjct: 1 MPRPSSSLASLLLSNSLLPSLCRASSAQKSLKAASFIPSSALSTNS-HVKTRRF-NKDLC 58
Query: 215 RVP-TAXXXXXXXXXXKHQEAKASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVV 39
RV T K +E + KDSS+GY EY RLLP + Q PYRVEHLVVSEGG+V
Sbjct: 59 RVSKTKEIKASTPLSSKLKEVEVPKDSSSGYPEYDRLLPSTLQHSPYRVEHLVVSEGGIV 118
Query: 38 LDYICKALNLPP 3
LDYICKAL LPP
Sbjct: 119 LDYICKALRLPP 130
>ref|XP_020244073.1| RNA pseudouridine synthase 6, chloroplastic isoform X1 [Asparagus
officinalis]
Length = 499
Score = 136 bits (342), Expect = 5e-35
Identities = 80/132 (60%), Positives = 91/132 (68%), Gaps = 1/132 (0%)
Frame = -3
Query: 395 MPRISPSLASIFFSNALPPSLCRPLSTPQPLKASTFALSRALSTASPHVKSRRFMKKDLC 216
MPR S SLAS+ SN+L PSLCR S + LKA++F S ALST S HVK+RRF KDLC
Sbjct: 1 MPRPSSSLASLLLSNSLLPSLCRASSAQKSLKAASFIPSSALSTNS-HVKTRRF-NKDLC 58
Query: 215 RVP-TAXXXXXXXXXXKHQEAKASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVV 39
RV T K +E + KDSS+GY EY RLLP + Q PYRVEHLVVSEGG+V
Sbjct: 59 RVSKTKEIKASTPLSSKLKEVEVPKDSSSGYPEYDRLLPSTLQHSPYRVEHLVVSEGGIV 118
Query: 38 LDYICKALNLPP 3
LDYICKAL LPP
Sbjct: 119 LDYICKALRLPP 130
>ref|XP_008800212.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Phoenix
dactylifera]
Length = 483
Score = 88.6 bits (218), Expect = 1e-17
Identities = 64/125 (51%), Positives = 74/125 (59%), Gaps = 2/125 (1%)
Frame = -3
Query: 371 ASIFFSNALPPSLCRPLSTPQPLKASTFALSRALSTASPHVKSRRFMKKDLCRVPT--AX 198
A + SNAL L S+ + L A AL+RALSTA PH + R KK++C V T A
Sbjct: 6 ALVSMSNALVSPLWA--SSRRALMAPA-ALARALSTA-PHPRGNRRHKKEICWVATKKAP 61
Query: 197 XXXXXXXXXKHQEAKASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVVLDYICKA 18
E+ AS +NGY EY RLLPC SQ P RVEHLVVSE GVVLDYI KA
Sbjct: 62 PPRSSKAEAIAVESTASA-LANGYPEYKRLLPCPSQNQPPRVEHLVVSEDGVVLDYISKA 120
Query: 17 LNLPP 3
L+LPP
Sbjct: 121 LHLPP 125
>gb|OMO76757.1| Pseudouridine synthase, RsuA/RluB/C/D/E/F [Corchorus capsularis]
Length = 475
Score = 84.3 bits (207), Expect = 3e-16
Identities = 59/128 (46%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
Frame = -3
Query: 383 SPSLASIFFSNALPPSLCRPLSTPQPLKASTFALSRALSTASPHVKSRRFMKKDLCRVPT 204
S SL SIFF N CR LS P L + A S AS K R+ K + +
Sbjct: 3 SASLTSIFFGNG-----CRSLSAPVSLLRTL-----ASSNASSLYKLRKNNSKTVLSCLS 52
Query: 203 AXXXXXXXXXXKHQEAK-ASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVVLDYI 27
+ K A+ AS + NGY EY RLLPC S+ P RVEHLVVSEGG VL+YI
Sbjct: 53 SSKRGLSCLSSKVDVAQTASTSTVNGYPEYHRLLPCPSENGPPRVEHLVVSEGGPVLEYI 112
Query: 26 CKALNLPP 3
CKAL+LPP
Sbjct: 113 CKALDLPP 120
>ref|XP_019078311.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1
[Vitis vinifera]
emb|CBI23187.3| unnamed protein product, partial [Vitis vinifera]
Length = 472
Score = 81.6 bits (200), Expect = 3e-15
Identities = 64/133 (48%), Positives = 72/133 (54%), Gaps = 9/133 (6%)
Frame = -3
Query: 374 LASIFFS---NALPPSLCRPLSTPQPLKASTFALSRALSTASPHVKSRRFMKKDLC-RVP 207
L SIF S ++L S CR TP AL+R L AS +V SRR + C P
Sbjct: 6 LTSIFTSGLVSSLWNSNCRSFGTP-------VALARTL--ASSNVFSRRHKRVVWCSNNP 56
Query: 206 TAXXXXXXXXXXKHQEAKASKDSSN-----GYTEYGRLLPCSSQQVPYRVEHLVVSEGGV 42
T +E AS DS+N GY EY RLLPC SQ P RVEHLVVSEGG
Sbjct: 57 TCT-----------RELTASSDSANTSSVNGYPEYHRLLPCPSQNGPPRVEHLVVSEGGC 105
Query: 41 VLDYICKALNLPP 3
VLDYI KAL+LPP
Sbjct: 106 VLDYISKALDLPP 118
>ref|XP_010938616.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1
[Elaeis guineensis]
Length = 483
Score = 81.6 bits (200), Expect = 3e-15
Identities = 64/127 (50%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
Frame = -3
Query: 377 SLASIFFSNALPPSLCRPLSTPQPLKASTFALSRALSTASPHVKSRRFMKKDLCRVPT-- 204
+LAS+ SNAL L S+ + L A AL+ AL+ A+PH R KKD+C V T
Sbjct: 6 ALASL--SNALVSPLWA--SSRRALMAPA-ALACALA-AAPHPCRNRGRKKDICWVATKK 59
Query: 203 AXXXXXXXXXXKHQEAKASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVVLDYIC 24
A E+ AS +NGY EY RLLPC SQ P RVEHLVVSE GVVLDYI
Sbjct: 60 APLRRSFKAEAIAVESTASA-LANGYPEYKRLLPCPSQNQPPRVEHLVVSEEGVVLDYIS 118
Query: 23 KALNLPP 3
KAL+LPP
Sbjct: 119 KALHLPP 125
>gb|KDO75507.1| hypothetical protein CISIN_1g011530mg [Citrus sinensis]
Length = 279
Score = 76.3 bits (186), Expect = 9e-14
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = -3
Query: 158 AKASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVVLDYICKALNLPP 3
A A+ SS GY EY RLLPC SQ P RVEHLVVSEGG VL+YIC+ LNLPP
Sbjct: 73 AAATTPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPP 124
>gb|KDO75508.1| hypothetical protein CISIN_1g011530mg [Citrus sinensis]
gb|KDO75509.1| hypothetical protein CISIN_1g011530mg [Citrus sinensis]
gb|KDO75510.1| hypothetical protein CISIN_1g011530mg [Citrus sinensis]
gb|KDO75511.1| hypothetical protein CISIN_1g011530mg [Citrus sinensis]
Length = 284
Score = 76.3 bits (186), Expect = 9e-14
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = -3
Query: 158 AKASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVVLDYICKALNLPP 3
A A+ SS GY EY RLLPC SQ P RVEHLVVSEGG VL+YIC+ LNLPP
Sbjct: 73 AAATTPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPP 124
>gb|KDO75506.1| hypothetical protein CISIN_1g011530mg [Citrus sinensis]
Length = 354
Score = 76.3 bits (186), Expect = 2e-13
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = -3
Query: 158 AKASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVVLDYICKALNLPP 3
A A+ SS GY EY RLLPC SQ P RVEHLVVSEGG VL+YIC+ LNLPP
Sbjct: 73 AAATTPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPP 124
>ref|XP_024046026.1| RNA pseudouridine synthase 6, chloroplastic isoform X4 [Citrus
clementina]
Length = 390
Score = 76.3 bits (186), Expect = 2e-13
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = -3
Query: 158 AKASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVVLDYICKALNLPP 3
A A+ SS GY EY RLLPC SQ P RVEHLVVSEGG VL+YIC+ LNLPP
Sbjct: 73 AAAATPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPP 124
>ref|XP_024046025.1| RNA pseudouridine synthase 6, chloroplastic isoform X3 [Citrus
clementina]
Length = 464
Score = 76.3 bits (186), Expect = 2e-13
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = -3
Query: 158 AKASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVVLDYICKALNLPP 3
A A+ SS GY EY RLLPC SQ P RVEHLVVSEGG VL+YIC+ LNLPP
Sbjct: 73 AAAATPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPP 124
>ref|XP_006449064.1| RNA pseudouridine synthase 6, chloroplastic isoform X2 [Citrus
clementina]
gb|ESR62304.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
Length = 469
Score = 76.3 bits (186), Expect = 2e-13
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = -3
Query: 158 AKASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVVLDYICKALNLPP 3
A A+ SS GY EY RLLPC SQ P RVEHLVVSEGG VL+YIC+ LNLPP
Sbjct: 73 AAAATPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPP 124
>gb|KDO75505.1| hypothetical protein CISIN_1g011530mg [Citrus sinensis]
Length = 483
Score = 76.3 bits (186), Expect = 2e-13
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = -3
Query: 158 AKASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVVLDYICKALNLPP 3
A A+ SS GY EY RLLPC SQ P RVEHLVVSEGG VL+YIC+ LNLPP
Sbjct: 73 AAATTPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPP 124
>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1
[Citrus sinensis]
ref|XP_006468003.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1
[Citrus sinensis]
Length = 487
Score = 76.3 bits (186), Expect = 2e-13
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = -3
Query: 158 AKASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVVLDYICKALNLPP 3
A A+ SS GY EY RLLPC SQ P RVEHLVVSEGG VL+YIC+ LNLPP
Sbjct: 73 AAATTPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPP 124
>ref|XP_006449066.1| RNA pseudouridine synthase 6, chloroplastic isoform X1 [Citrus
clementina]
ref|XP_024046024.1| RNA pseudouridine synthase 6, chloroplastic isoform X1 [Citrus
clementina]
gb|ESR62306.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
Length = 487
Score = 76.3 bits (186), Expect = 2e-13
Identities = 37/52 (71%), Positives = 40/52 (76%)
Frame = -3
Query: 158 AKASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVVLDYICKALNLPP 3
A A+ SS GY EY RLLPC SQ P RVEHLVVSEGG VL+YIC+ LNLPP
Sbjct: 73 AAAATPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPP 124
>ref|XP_017978576.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Theobroma
cacao]
ref|XP_017978577.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Theobroma
cacao]
ref|XP_017978578.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Theobroma
cacao]
Length = 478
Score = 75.5 bits (184), Expect = 4e-13
Identities = 37/50 (74%), Positives = 39/50 (78%)
Frame = -3
Query: 152 ASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVVLDYICKALNLPP 3
AS S NGY EY RLLPC S P RVEHLVVSEGG VL+YICKAL+LPP
Sbjct: 72 ASATSVNGYPEYHRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKALDLPP 121
>ref|XP_021294797.1| RNA pseudouridine synthase 6, chloroplastic [Herrania umbratica]
Length = 480
Score = 75.5 bits (184), Expect = 4e-13
Identities = 37/50 (74%), Positives = 39/50 (78%)
Frame = -3
Query: 152 ASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVVLDYICKALNLPP 3
AS S NGY EY RLLPC S P RVEHLVVSEGG VL+YICKAL+LPP
Sbjct: 74 ASATSVNGYPEYHRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKALDLPP 123
>ref|XP_010267715.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Nelumbo
nucifera]
Length = 484
Score = 74.7 bits (182), Expect = 8e-13
Identities = 46/99 (46%), Positives = 55/99 (55%)
Frame = -3
Query: 299 ASTFALSRALSTASPHVKSRRFMKKDLCRVPTAXXXXXXXXXXKHQEAKASKDSSNGYTE 120
A + AL R L+ AS +V RR C ++ A S S+NGY E
Sbjct: 33 AGSVALVRRLA-ASNNVYRRRDKNLGRCSWGSSHSRFSCCNSRTDVSAPVSSPSANGYPE 91
Query: 119 YGRLLPCSSQQVPYRVEHLVVSEGGVVLDYICKALNLPP 3
Y RLLPC Q P R+EHLVVSEGG VL+YI KAL+LPP
Sbjct: 92 YTRLLPCPLQNGPPRIEHLVVSEGGPVLEYISKALDLPP 130
>gb|PKI32736.1| hypothetical protein CRG98_046872, partial [Punica granatum]
Length = 120
Score = 70.1 bits (170), Expect = 1e-12
Identities = 33/44 (75%), Positives = 33/44 (75%)
Frame = -3
Query: 134 NGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVVLDYICKALNLPP 3
NGY EY RLLPC P RVEHLVVSEGG LDYI KALNLPP
Sbjct: 77 NGYPEYNRLLPCPLHNTPPRVEHLVVSEGGPALDYISKALNLPP 120
>ref|XP_007213527.1| RNA pseudouridine synthase 6, chloroplastic [Prunus persica]
gb|ONI10035.1| hypothetical protein PRUPE_4G024200 [Prunus persica]
Length = 477
Score = 73.9 bits (180), Expect = 2e-12
Identities = 52/127 (40%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Frame = -3
Query: 374 LASIFFSNALPPSLCRPLSTPQPLKASTFALSRALSTAS---PHVKSRRFMKKDLCRVPT 204
+ S+ F++ L CR S P L + ALS + HVK F + R
Sbjct: 1 MGSVSFTSMLANG-CRSFSAPVALVRTLALTHVALSEHANNYKHVKVACFSRSSKKRTTF 59
Query: 203 AXXXXXXXXXXKHQEAKASKDSSNGYTEYGRLLPCSSQQVPYRVEHLVVSEGGVVLDYIC 24
A S S NGY EY RLLPC S P RVEHLVVSEGG VL+YIC
Sbjct: 60 ACESLKQGVTQP-----TSVSSVNGYPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYIC 114
Query: 23 KALNLPP 3
K L+LPP
Sbjct: 115 KTLDLPP 121