BLASTX nr result

ID: Ophiopogon22_contig00025653 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00025653
         (642 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008805363.1| PREDICTED: putative disease resistance prote...    72   6e-11

>ref|XP_008805363.1| PREDICTED: putative disease resistance protein RGA3 [Phoenix
           dactylifera]
          Length = 404

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 72/207 (34%), Positives = 94/207 (45%), Gaps = 51/207 (24%)
 Frame = +1

Query: 28  VPITGMVGVGQTTL---FYND---------RVSVRFSQQ*D-----RSL*LKFMCGKDNE 156
           +PI GM GVG+TTL    YND         R  V  SQ  D     R++ L+ + GK  +
Sbjct: 197 IPIVGMAGVGKTTLAQLVYNDSRICEHFTTRGWVHVSQNFDVTRLTRAI-LESITGKPCD 255

Query: 157 SNYRITSENLITFKWKEG----LVLDDVWHEQD-TMAVPANPLTLCKSE*---------- 291
           SN  I  +  +  +   G    LVLDDVW+E++ T A   +P +  +             
Sbjct: 256 SNELIELQGTL-MEVLSGKRLLLVLDDVWNEKESTWACLMSPFSSAEMSKVVVTTRFVKV 314

Query: 292 -------------NFNDDS------RCAFDGQDPNDRPIFRRNWNTNCSVKYEELPLAAK 414
                        N  +D       R AFDGQDPN+ P          + K    PLAAK
Sbjct: 315 AKIMQTVVPYQLHNLTEDKCWQLFHRFAFDGQDPNEHPNLIEI-GKKIAAKCHGWPLAAK 373

Query: 415 TIGRLLCYETDEERRKDILHGDLLELI 495
           T+G  L +ETDEE  KDIL GDL EL+
Sbjct: 374 TLGGQLRFETDEESWKDILEGDLSELV 400


Top