BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00025524
         (838 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM94327.1| putative reverse transcriptase [Sorghum bicolor]        61   2e-10
gb|OAY62569.1| LINE-1 retrotransposable element ORF2 protein [An...    71   5e-10
gb|OAY84432.1| Transposon TX1 uncharacterized 149 kDa protein [A...    70   6e-10
ref|XP_020264999.1| uncharacterized protein LOC109840677 [Aspara...    70   1e-09
ref|XP_012477795.1| PREDICTED: uncharacterized protein LOC105793...    47   3e-09
ref|XP_020270858.1| uncharacterized protein LOC109846046 [Aspara...    68   5e-09
ref|XP_020192145.1| uncharacterized protein LOC109777995 [Aegilo...    60   1e-08
gb|PNX93424.1| ribonuclease H, partial [Trifolium pratense]            49   2e-08
ref|XP_012847426.1| PREDICTED: uncharacterized protein LOC105967...    57   4e-08
ref|XP_020185877.1| uncharacterized protein LOC109771591 [Aegilo...    57   8e-08
dbj|GAU30590.1| hypothetical protein TSUD_392810 [Trifolium subt...    49   2e-07
ref|XP_020201200.1| uncharacterized protein LOC109787051 [Aegilo...    54   2e-07
ref|XP_008390125.1| PREDICTED: uncharacterized protein LOC103452...    49   2e-07
gb|PNX98658.1| ribonuclease H, partial [Trifolium pratense]            52   4e-07
dbj|GAU45339.1| hypothetical protein TSUD_84560 [Trifolium subte...    49   4e-07
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...    46   5e-07
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ...    46   5e-07
dbj|GAU34840.1| hypothetical protein TSUD_259200 [Trifolium subt...    48   5e-07
dbj|GAU39014.1| hypothetical protein TSUD_378900 [Trifolium subt...    43   5e-07
gb|PNX80358.1| ribonuclease H, partial [Trifolium pratense]            50   5e-07

>gb|AAM94327.1| putative reverse transcriptase [Sorghum bicolor]
          Length = 1998

 Score = 60.8 bits (146), Expect(2) = 2e-10
 Identities = 54/194 (27%), Positives = 77/194 (39%), Gaps = 8/194 (4%)
 Frame = +2

Query: 29   FNGIIGHLGLLDMSFSDRLFTWSNLREDPCLAKFDSXXXXXXXXXXXXXXXXXXXETDFG 208
            FN  I  LGL ++    R +TWSN++ +P L K D                      D  
Sbjct: 971  FNSAISSLGLNEIILQGRKYTWSNMQSNPLLQKID--WTFTSNSWNIKFLDTSVKGYDMT 1028

Query: 209  PCAHLP-LVWENIKFCK-RLFRFERMWLEEEDIGAIIRESWA*PTSASDAVGNXXXXXXX 382
            P  H P LV  + K  K ++FRFE  WL       II + W  PT   D   +       
Sbjct: 1029 PSDHAPCLVKVSTKIPKTKVFRFENCWLRLPGFQQIISDVWNVPTHHLDQAKSITAKFKK 1088

Query: 383  XXXVLSKRE------KRHNQKFLDSIDILEKLDEFRVLLDQEAIELVDHHHELIEIFKRE 544
                L +++      K    K    I  LE L+E+R L   E         +L E+ +++
Sbjct: 1089 LRKALKEKQASMAHLKTVISKVKLVIQFLELLEEYRDLSMLEWNFRAILKKKLTELLEQQ 1148

Query: 545  EIMWGQRAQCLWLK 586
            +I W QR    W+K
Sbjct: 1149 KIYWRQRGAIKWIK 1162



 Score = 33.5 bits (75), Expect(2) = 2e-10
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = +1

Query: 586  GDVTTVFFHKFASMRRKINSIDSLESEDGSL 678
            GD TT FFH  A+++ + N ++ L+ +DGS+
Sbjct: 1164 GDATTKFFHANATIKMRGNLVNQLQKQDGSI 1194


>gb|OAY62569.1| LINE-1 retrotransposable element ORF2 protein [Ananas comosus]
          Length = 708

 Score = 70.9 bits (172), Expect = 5e-10
 Identities = 73/278 (26%), Positives = 111/278 (39%), Gaps = 25/278 (8%)
 Frame = +2

Query: 29  FNGIIGHLGLLDMSFSDRLFTWSNLREDPCLAKFDSXXXXXXXXXXXXXXXXXXXETDFG 208
           F+ +I +L ++D+  S++ FTWSN++  P LAK D                    + DF 
Sbjct: 4   FSDLIANLAVIDLPISNQNFTWSNMQRAPTLAKLD------------RFLITTEWDQDFP 51

Query: 209 PCA----------HLPLVWE---NIKFCKRLFRFERMWLEEEDIGAIIRESWA*PTSASD 349
            C           H PL+          +R FRFER+WL  ED    +   W   TS   
Sbjct: 52  HCTVSALPRITSDHTPLILNTGGTQSTRRRRFRFERVWLSREDFSTSVPIWWNEVTSERS 111

Query: 350 AVGNXXXXXXXXXXVLSK--REKRHN--------QKFLDSIDILEKLDEFRVLLDQEAIE 499
           A+             + +  R K H+        Q+ + SID+LE++D     +  + + 
Sbjct: 112 AILTLTAKLRHCRTRMKEWCRTKFHSISNAIRSFQEEIRSIDLLEEIDTLSPEVRDKRVN 171

Query: 500 LVDHHHELIEIFKREEIMWGQRAQCLWLKGMSPLSSFTSLPV*GEKSTPSI--L*SLRMA 673
           L     +L  I K EEI+W  RA+  WLK     + F      G K +  I  +      
Sbjct: 172 L---KAQLQLILKEEEILWKSRAKQHWLKEGDGNTKFFHAVANGRKRSNEIHYIVDDNGD 228

Query: 674 LWMANLSSRPIFFSHFKELFGRSFHKRINLSPGSWANL 787
            ++        F+  FK LFG    +    S G WA+L
Sbjct: 229 HFVNEAQKNSYFYHTFKRLFGSD--EVGPASFGDWADL 264


>gb|OAY84432.1| Transposon TX1 uncharacterized 149 kDa protein [Ananas comosus]
          Length = 588

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 73/275 (26%), Positives = 112/275 (40%), Gaps = 22/275 (8%)
 Frame = +2

Query: 29  FNGIIGHLGLLDMSFSDRLFTWSNLREDPCLAKFDSXXXXXXXXXXXXXXXXXXXETDFG 208
           F+ +I +L ++D+  S++ FTWSN++  P LAK D                    + DF 
Sbjct: 4   FSDLIANLAVIDLPISNQNFTWSNMQRAPTLAKLD------------RFLITTEWDQDFP 51

Query: 209 PCA----------HLPLVWE---NIKFCKRLFRFERMWLEEEDIGAIIRESWA*PTSASD 349
            C           H PL+          +R FRFER+WL  ED    +   W   TS   
Sbjct: 52  HCTVSALPRITSDHTPLILNTGGTQSTRRRRFRFERVWLSREDFSTSVPIWWNEVTSERS 111

Query: 350 AVGNXXXXXXXXXXVLSK--REKRHN-----QKFLDSIDILEKLDEFRVLLDQEAIELVD 508
           A+             + +  R K H+     + F + I  ++ L+E   L  +   + V+
Sbjct: 112 AILTLSAKLRHCRTRMKEWCRTKFHSISNAIRSFQEEIRSIDHLEEIDTLSPEVRDKRVN 171

Query: 509 HHHELIEIFKREEIMWGQRAQCLWLKGMSPLSSFTSLPV*GEKSTPSIL*SL-RMALWMA 685
              +L  I K EEI+W  RA+  WLK     + F      G K +  I   +      + 
Sbjct: 172 LKAQLQLILKEEEILWKSRAKQHWLKEGDGNTKFFHAVANGRKRSNEIHYIVDDNGNHIV 231

Query: 686 NLSSRPIFFSH-FKELFGRSFHKRINLSPGSWANL 787
           N + +  +F H FK LFG    +    S G WA+L
Sbjct: 232 NEAQKNSYFYHTFKRLFGSD--EVGPASFGDWADL 264


>ref|XP_020264999.1| uncharacterized protein LOC109840677 [Asparagus officinalis]
          Length = 962

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 75/269 (27%), Positives = 103/269 (38%), Gaps = 16/269 (5%)
 Frame = +2

Query: 29  FNGIIGHLGLLDMSFSDRLFTWSNLREDPCLAKFDSXXXXXXXXXXXXXXXXXXXETDFG 208
           F   +    L+D+  S R FTWSN R +P +A+ D                     +   
Sbjct: 33  FRNFVTSASLIDLPLSGRAFTWSNKRLNPSMARLDRFLLSPDWDKEFPLCIQCSPPSMGS 92

Query: 209 PCAHLPLVWEN--IKFCKRLFRFERMWLEEEDIGAIIRESWA*PTSASDAVGNXXXXXXX 382
              H P+V ++   K     F FER W    D    I  SW    ++    GN       
Sbjct: 93  D--HCPIVLDSGGFKHGPSFFIFERSWFHNPDFIPFINTSW----NSFQCKGNPLDVFIM 146

Query: 383 XXXVLSKREKRHNQKFLDSI-----DILEKLDEF------RVLLDQEAIELVDHHHELIE 529
              +L +  K   +  L SI     DIL K++ F      R L D E IE          
Sbjct: 147 KLKLLKRMIKWWKKNILGSISSRKADILSKINSFDLLEEQRPLSDSEFIERKSLQSSFSS 206

Query: 530 IFKREEIMWGQRAQCLWLK-GMSPLSSFTSLPV*GEKST--PSIL*SLRMALWMANLSSR 700
           I K EE  W QR++  WLK G S  S F       +K+    SI    R      ++S  
Sbjct: 207 IIKEEETYWHQRSRIQWLKEGDSNTSFFHKTATFHKKANYITSITHEGRELTREHDISK- 265

Query: 701 PIFFSHFKELFGRSFHKRINLSPGSWANL 787
             FF ++  LFG+S     NLS   W++L
Sbjct: 266 -AFFDYYYSLFGQS---NRNLSSIDWSSL 290


>ref|XP_012477795.1| PREDICTED: uncharacterized protein LOC105793429 [Gossypium
           raimondii]
          Length = 1092

 Score = 47.4 bits (111), Expect(2) = 3e-09
 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
 Frame = +2

Query: 263 FRFERMWLEEEDIGAIIRESWA*PT-SASDAVGNXXXXXXXXXXVLSKREKRHNQKFLDS 439
           F+FE  W  EE I   IRE+W  P  S  + + N           + K+ K   ++    
Sbjct: 140 FKFEAWWTTEESIEEEIREAWKSPNGSVLEKLENLQISLLKWAKSIKKQRKGMTERISKE 199

Query: 440 IDILEKLDEFRVLLDQEAI-ELVDHHHELIEIFKREEIMWGQRAQCLWLK 586
           ++ L K +     LD++ + +++D    L    ++EE+ W QRA+  WLK
Sbjct: 200 LEDLMKKE-----LDEDVMNQMIDKRIHLSMEIEKEEMYWEQRARANWLK 244



 Score = 43.1 bits (100), Expect(2) = 3e-09
 Identities = 18/28 (64%), Positives = 23/28 (82%)
 Frame = +1

Query: 589 DVTTVFFHKFASMRRKINSIDSLESEDG 672
           D  T FFHK+ASMRR+IN+I  L+S+DG
Sbjct: 247 DKNTAFFHKYASMRRRINTISRLDSDDG 274


>ref|XP_020270858.1| uncharacterized protein LOC109846046 [Asparagus officinalis]
          Length = 587

 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 50/195 (25%), Positives = 79/195 (40%), Gaps = 7/195 (3%)
 Frame = +2

Query: 23  EHFNGIIGHLGLLDMSFSDRLFTWSNLREDPCLAKFDSXXXXXXXXXXXXXXXXXXXETD 202
           + FN +I  L L+D     R FTWSN R  P +A+ D                     + 
Sbjct: 2   KEFNDVINELELIDSPLHGRKFTWSNKRMSPSMARLDRVFFNSDWEDIFPFSKQQGLSSQ 61

Query: 203 FGPCAHLPLVWENIKFCKRLFRFERMWLEEEDIGAIIRESWA*PTSASDAVGNXXXXXXX 382
               A +   + + +   + FRFE +WL  E+    +   W    S+  A  N       
Sbjct: 62  LSDHAPISFDFGDTQCYVKKFRFENIWLRSEEFINNVPVWWRCAPSSGSAAKNIVGKLRF 121

Query: 383 XXXVLSK-------REKRHNQKFLDSIDILEKLDEFRVLLDQEAIELVDHHHELIEIFKR 541
               + +         ++  +  LD++   E L+E R L D E I+  +   +L EI  +
Sbjct: 122 MRKCIKQWMHSNFHSVRQQKKDLLDNLLTWEVLEENRDLSDDELIKKNNTVLQLNEILLQ 181

Query: 542 EEIMWGQRAQCLWLK 586
           EE MW QR++  WLK
Sbjct: 182 EERMWKQRSKVQWLK 196


>ref|XP_020192145.1| uncharacterized protein LOC109777995 [Aegilops tauschii subsp.
           tauschii]
          Length = 1001

 Score = 59.7 bits (143), Expect(2) = 1e-08
 Identities = 48/196 (24%), Positives = 81/196 (41%), Gaps = 10/196 (5%)
 Frame = +2

Query: 29  FNGIIGHLGLLDMSFSDRLFTWSNLREDPCLAKFD---SXXXXXXXXXXXXXXXXXXXET 199
           FN IIGHLGLL++    R +TWSN+++DP L + D   +                    +
Sbjct: 17  FNEIIGHLGLLELPIKARSYTWSNMQDDPLLEQLDWFFTSVDWISDYPMTEVLPLARTAS 76

Query: 200 DFGPCAHLPLVWENIKFCK-RLFRFERMWLEEEDIGAIIRESWA*PTSASDAVGNXXXXX 376
           D  PC    +V       K  +FRFE  WLE E     +  SW   +             
Sbjct: 77  DHVPC----MVTIKTSIPKSNIFRFENYWLELEGFMDCVDSSWQKQSRKGHITARIADKF 132

Query: 377 XXXXXVLSKREKRHNQ------KFLDSIDILEKLDEFRVLLDQEAIELVDHHHELIEIFK 538
                 L + +K  ++      K    I +L++L+E+R L  QE+   +   + + ++  
Sbjct: 133 KSLRMCLKRWQKSISKLKTLICKCNSVILLLDELEEYRTLYRQESNFRIVVKYHVEKLLH 192

Query: 539 REEIMWGQRAQCLWLK 586
            + + W +R    ++K
Sbjct: 193 LQYLYWRKRCTIRYIK 208



 Score = 28.5 bits (62), Expect(2) = 1e-08
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 586 GDVTTVFFHKFASMRRKINSIDSLESEDGSL 678
           G   T FFH  A+ R + NSI SL+  DG++
Sbjct: 210 GGENTKFFHAMATERYRRNSIASLKLPDGTV 240


>gb|PNX93424.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1413

 Score = 48.5 bits (114), Expect(3) = 2e-08
 Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
 Frame = +2

Query: 263  FRFERMWLEEEDIGAIIRESWA*PTSASDAVGNXXXXXXXXXXVLSKREKRHNQKFLDSI 442
            FRFE  WL+EEDIG ++ E W    +  + +G            L +  +R  ++F +  
Sbjct: 737  FRFENSWLKEEDIGEVVNEGW----NNGEGLG-IMNRLTNCADRLQRWGRRKKKRFKE-- 789

Query: 443  DILEKLDEFRVLLDQEAIELV----DHHHELIEIFKREEIMWGQRAQCLWLK 586
            +I+E   E   L D+     +    + H++ ++   +EE  W QRA+  WLK
Sbjct: 790  EIMEAEAEMERLRDKNDTSSIARFNEAHNQHVKALIQEEAFWRQRAKMHWLK 841



 Score = 31.6 bits (70), Expect(3) = 2e-08
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 586 GDVTTVFFHKFASMRRKINSIDSLESED 669
           GD+ T FFH  AS R K+  I+ L  +D
Sbjct: 843 GDLNTKFFHMSASARAKVKKIEKLRGDD 870



 Score = 26.9 bits (58), Expect(3) = 2e-08
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 138 LVSCKWEVKFCLAKLVPVKKPTSDHVPICL 227
           L S +W  KF  AKL+ +    SDH PI L
Sbjct: 694 LASTEWLSKFPNAKLINLLTSHSDHSPILL 723


>ref|XP_012847426.1| PREDICTED: uncharacterized protein LOC105967373 [Erythranthe guttata]
          Length = 1766

 Score = 57.4 bits (137), Expect(2) = 4e-08
 Identities = 51/204 (25%), Positives = 82/204 (40%), Gaps = 13/204 (6%)
 Frame = +2

Query: 14   REREHFNGIIGHLGLLDMSFSDRLFTWSNLREDPCLAKFDSXXXXXXXXXXXXXXXXXXX 193
            ++ + F+  +    L D+ F    FTWSN R+ P   +                      
Sbjct: 588  KDIQEFSDCLRDTRLNDLGFVGYPFTWSNNRKAPHTTRERLDRACGNNEWMELFPNYRVR 647

Query: 194  ETDFGPCAHLPLV--WENIKFCK-----RLFRFERMWLEEEDIGAIIRESWA*PTSASDA 352
              D     H+PL+  W +    +     R F+FE MWL+ E+   IIRE+W    S   +
Sbjct: 648  HLDALYSDHIPLLIEWRSAIIAQQGGRNRGFKFEAMWLKSEECEQIIRENWHANVSQQTS 707

Query: 353  VGNXXXXXXXXXXVLSKRE------KRHNQKFLDSIDILEKLDEFRVLLDQEAIELVDHH 514
            +            +L          +   +K  + I  L+K    RVL  +   E+ D  
Sbjct: 708  LDQWSNLEHCKLGLLRWSRVSFGCVRDRIRKLKEKIVKLKK----RVLTAETKSEIHDLS 763

Query: 515  HELIEIFKREEIMWGQRAQCLWLK 586
             EL E+  +EE+MW QRA+  W++
Sbjct: 764  RELDELLDKEEVMWRQRAKAHWMR 787



 Score = 29.3 bits (64), Expect(2) = 4e-08
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 574 FMA*GDVTTVFFHKFASMRRKINSIDSLESEDG 672
           +M  GD  T FFH  AS RR+ N+I  L + +G
Sbjct: 785 WMREGDKNTKFFHAKASSRRRKNTIAGLCNSEG 817


>ref|XP_020185877.1| uncharacterized protein LOC109771591 [Aegilops tauschii subsp.
           tauschii]
          Length = 772

 Score = 56.6 bits (135), Expect(2) = 8e-08
 Identities = 52/193 (26%), Positives = 74/193 (38%), Gaps = 11/193 (5%)
 Frame = +2

Query: 29  FNGIIGHLGLLDMSFSDRLFTWSNLREDPCLAKFDSXXXXXXXXXXXXXXXXXXXETDFG 208
           FN ++  L L +++ SDRLFTW+N R+ P LA+ D                         
Sbjct: 315 FNSLVNSLALHELALSDRLFTWTNRRDPPTLARLDRVFFDHAWDVAFPDSGLSSRPRSTS 374

Query: 209 PCAHLPLVWE---NIKFCKRLFRFERMWLEEEDIGAIIRESWA*PTSASDAVGNXXXXXX 379
              H+PLV E    I    R F FE  WL +         SW+   ++  AVG       
Sbjct: 375 D--HVPLVVEAATRIPSPSRFF-FENAWLRDPQFLPSTLSSWSNTGASRCAVGCLATRKK 431

Query: 380 XXXXVLSKREKRH--------NQKFLDSIDILEKLDEFRVLLDQEAIELVDHHHELIEIF 535
                    ++ H        N KF+  ID+L+  +E R L   E     D    L    
Sbjct: 432 RFRAAAKVWKRLHKYIPAFDNNCKFV--IDLLDFWEECRTLSSDEHQLRQDTRVALAASI 489

Query: 536 KREEIMWGQRAQC 574
           +R+   W QR +C
Sbjct: 490 RRQSAYWKQRGKC 502



 Score = 28.9 bits (63), Expect(2) = 8e-08
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +1

Query: 586 GDVTTVFFHKFASMRRKINSIDSLESEDGSL 678
           GD  T FFH  AS RR+ NSI  L+  DG++
Sbjct: 508 GDENTGFFHASASHRRRANSIRVLD-VDGAM 537


>dbj|GAU30590.1| hypothetical protein TSUD_392810 [Trifolium subterraneum]
          Length = 1520

 Score = 48.5 bits (114), Expect(3) = 2e-07
 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
 Frame = +2

Query: 263 FRFERMWLEEEDIGAIIRESWA*PTSASDAVGNXXXXXXXXXXVLSKREKRHNQKFLDSI 442
           F+FE  WL+EEDIG ++ E W      S                L +  +R  ++F + I
Sbjct: 589 FKFENSWLKEEDIGEVVNEGW-----DSGEGNEITQRLSHCAEKLQRWGRRKRKRFKEEI 643

Query: 443 DILE-KLDEFRVLLDQEAI-ELVDHHHELIEIFKREEIMWGQRAQCLWLK 586
             LE +++  R+  D  +I + ++   +  +   +EE  W QRA+  WLK
Sbjct: 644 MELEAEMERLRIRNDAPSIAKFIEVQQQHAKSLVQEEAFWRQRAKMHWLK 693



 Score = 31.2 bits (69), Expect(3) = 2e-07
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +1

Query: 586 GDVTTVFFHKFASMRRKINSIDSLESED 669
           GD+ T FFH+ A++R K+  I  L ++D
Sbjct: 695 GDLNTKFFHRSATVRAKVKKIAKLRNDD 722



 Score = 23.9 bits (50), Expect(3) = 2e-07
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 138 LVSCKWEVKFCLAKLVPVKKPTSDHVPICL 227
           L S +W   F  AKL+ +    SDH PI L
Sbjct: 546 LASSEWLDIFPNAKLINLLSSHSDHSPILL 575


>ref|XP_020201200.1| uncharacterized protein LOC109787051 [Aegilops tauschii subsp.
           tauschii]
          Length = 1212

 Score = 54.3 bits (129), Expect(2) = 2e-07
 Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 16/202 (7%)
 Frame = +2

Query: 29  FNGIIGHLGLLDMSFSDRLFTWSNLREDPCLAKFDSXXXXXXXXXXXXXXXXXXXETDFG 208
           FN IIGHLGLL++    R +TWSN+++ P L + D                     T+  
Sbjct: 40  FNEIIGHLGLLELPIEGRSYTWSNMQDTPLLEQLD-------WFFTSVDWISDYPMTEVL 92

Query: 209 PCA-----HLPLVWENIKFC---KRLFRFERMWLEEEDIGAIIRESWA*PTSASDAVGNX 364
           P A     H+P V   IK       LFRFE  WLE E     +  SW   +         
Sbjct: 93  PLARTASDHVPCV-VTIKTSIPKSNLFRFENYWLELEGFMDCVDSSWQKQSRKGHITARI 151

Query: 365 XXXXXXXXXVLSKREKRHNQ------KFLDSIDILEKLDEFRVLLDQEA--IELVDHHHE 520
                     L + +K  ++      K  + + +L++L+E+R L   E+   ++V +H E
Sbjct: 152 ADKFKSVRMCLKRWQKNISKLKTLVCKCNNVVLLLDELEEYRPLYRHESNFRKVVKNHVE 211

Query: 521 LIEIFKREEIMWGQRAQCLWLK 586
             ++   + + W +R    ++K
Sbjct: 212 --KLLHLQCLYWKKRCTIRYIK 231



 Score = 30.0 bits (66), Expect(2) = 2e-07
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 586 GDVTTVFFHKFASMRRKINSIDSLESEDGSL 678
           G   T FFH  A+ R + NSI SL+  DG+L
Sbjct: 233 GGEKTKFFHAMATERHRRNSIASLKLPDGTL 263


>ref|XP_008390125.1| PREDICTED: uncharacterized protein LOC103452416 [Malus domestica]
          Length = 1072

 Score = 48.5 bits (114), Expect(2) = 2e-07
 Identities = 26/111 (23%), Positives = 54/111 (48%)
 Frame = +2

Query: 254 KRLFRFERMWLEEEDIGAIIRESWA*PTSASDAVGNXXXXXXXXXXVLSKREKRHNQKFL 433
           KRLFRFE  W +EED  A++ + W  P                   ++S    + N++ L
Sbjct: 239 KRLFRFEAFWAKEEDCRALVAKCWGSPGRGRWIDXWNLKLSICKSHLISXSRNKFNRRGL 298

Query: 434 DSIDILEKLDEFRVLLDQEAIELVDHHHELIEIFKREEIMWGQRAQCLWLK 586
           +  +++++LD  +   +  A E+    + + ++ ++ E+ W QR++  W +
Sbjct: 299 EIEELVQQLDSLQHHWEDNAEEIHVVSNRIDQLREQXELYWMQRSRVNWXR 349



 Score = 35.4 bits (80), Expect(2) = 2e-07
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +1

Query: 586 GDVTTVFFHKFASMRRKINSIDSLESEDGS 675
           GD  T FFH+    RR++NSI  L+  DGS
Sbjct: 351 GDANTAFFHRTTLQRRRVNSIVKLKDVDGS 380


>gb|PNX98658.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1119

 Score = 52.4 bits (124), Expect(3) = 4e-07
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
 Frame = +2

Query: 254 KRLFRFERMWLEEEDIGAIIRESWA*PTSAS--DAVGNXXXXXXXXXXVLSKREKRHNQK 427
           K  F+FE +WL+E+DI  ++  +W    SA   + +G            L +  +R   +
Sbjct: 250 KHAFKFENLWLKEDDIDDVVGMAWEREMSAEVVEKIG-------VCADELQRWGRRKRMR 302

Query: 428 FLDSIDIL-EKLDEFRVLLDQEAI-ELVDHHHELIEIFKREEIMWGQRAQCLWLK 586
           F + ++   E++++ R   DQE+I    + +H   +I  +EE  W QRA+  WLK
Sbjct: 303 FKEEVETCSEEMEKLRSRTDQESIMRFQELYHNHAKILVQEEAYWRQRAKMHWLK 357



 Score = 29.3 bits (64), Expect(3) = 4e-07
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 586 GDVTTVFFHKFASMRRKINSIDSLESED 669
           GD+ T FFH  A  R K+  I+ L +E+
Sbjct: 359 GDLNTKFFHMSAKARSKVKKIEKLVNEE 386



 Score = 20.8 bits (42), Expect(3) = 4e-07
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 138 LVSCKWEVKFCLAKLVPVKKPTSDHVPICL 227
           + +  W   F   KL+ +    SDH PI L
Sbjct: 210 MATSDWLALFPEVKLINLLATHSDHSPILL 239


>dbj|GAU45339.1| hypothetical protein TSUD_84560 [Trifolium subterraneum]
          Length = 867

 Score = 49.3 bits (116), Expect(3) = 4e-07
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
 Frame = +2

Query: 263  FRFERMWLEEEDIGAIIRESWA*PTSASDAVGNXXXXXXXXXXVLSKREKRHNQKFLDSI 442
            F+FE +WL+EE++G ++   W       D+              L +  +R   +F + +
Sbjct: 698  FKFENLWLKEEEVGEVVETGW-----CKDSCIEVIERVEACADELQRWGRRKRMRFKEEV 752

Query: 443  DI-LEKLDEFRVLLDQEAI----ELVDHHHELIEIFKREEIMWGQRAQCLWLK 586
            ++  E+++  R   DQ ++    EL + H  L+    +EE  W QRA+  WLK
Sbjct: 753  EVCCEEMENLRGRSDQSSVQRYQELQNTHARLL---VQEEAYWRQRAKMHWLK 802



 Score = 28.9 bits (63), Expect(3) = 4e-07
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +1

Query: 586 GDVTTVFFHKFASMRRKINSIDSLESED 669
           GD++T FFH  AS+R K+  +  L +E+
Sbjct: 804 GDLSTKFFHMSASVRSKVKKVVRLLNEE 831



 Score = 24.3 bits (51), Expect(3) = 4e-07
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 138 LVSCKWEVKFCLAKLVPVKKPTSDHVPICL 227
           +VS  W   F   KL+ +    SDH PI L
Sbjct: 655 MVSSDWLAFFSKVKLINLLASHSDHSPILL 684


>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score = 45.8 bits (107), Expect(3) = 5e-07
 Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
 Frame = +2

Query: 218 HLPLVWENIKFC----KRLFRFERMWLEEEDIGAIIRESWA*PTSASDAVGNXXXXXXXX 385
           H PL+ E  +       ++ R+E +W  E  +  +I+E+W     AS             
Sbjct: 179 HAPLLLEREETTLARPMKIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMKVTM 238

Query: 386 XXVLSKREKRHNQKFLDSIDILEKLDEFRV--LLDQEAIELVDHHHELIEIFKREEIMWG 559
             ++S  + +         D+ EKL E R   LLD +  E+     EL E+  REEI W 
Sbjct: 239 TKLVSWSKDKIGNVRKKIKDLREKLGELRNIGLLDTDN-EVHSVKKELEEMLHREEIWWK 297

Query: 560 QRAQCLWLK 586
           QR++  WLK
Sbjct: 298 QRSRITWLK 306



 Score = 31.6 bits (70), Expect(3) = 5e-07
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +1

Query: 586 GDVTTVFFHKFASMRRKINSIDSLESEDGS 675
           GD+ T +FH  AS R K N I  L+  DGS
Sbjct: 308 GDLNTRYFHLKASWRAKKNKIKKLKKNDGS 337



 Score = 24.6 bits (52), Expect(3) = 5e-07
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 138 LVSCKWEVKFCLAKLVPVKKPTSDHVPICL 227
           + S  W  +F  A +  +  P+SDH P+ L
Sbjct: 155 VASPAWSSRFPQAVITHLTTPSSDHAPLLL 184


>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score = 45.8 bits (107), Expect(3) = 5e-07
 Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
 Frame = +2

Query: 218 HLPLVWENIKFC----KRLFRFERMWLEEEDIGAIIRESWA*PTSASDAVGNXXXXXXXX 385
           H PL+ E  +       ++ R+E +W  E  +  +I+E+W     AS             
Sbjct: 204 HAPLLLEREETTLARPMKIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMKVTM 263

Query: 386 XXVLSKREKRHNQKFLDSIDILEKLDEFRV--LLDQEAIELVDHHHELIEIFKREEIMWG 559
             ++S  + +         D+ EKL E R   LLD +  E+     EL E+  REEI W 
Sbjct: 264 TKLVSWSKDKIGNVRKKIKDLREKLGELRNIGLLDTDN-EVHSVKKELEEMLHREEIWWK 322

Query: 560 QRAQCLWLK 586
           QR++  WLK
Sbjct: 323 QRSRITWLK 331



 Score = 31.6 bits (70), Expect(3) = 5e-07
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +1

Query: 586 GDVTTVFFHKFASMRRKINSIDSLESEDGS 675
           GD+ T +FH  AS R K N I  L+  DGS
Sbjct: 333 GDLNTRYFHLKASWRAKKNKIKKLKKNDGS 362



 Score = 24.6 bits (52), Expect(3) = 5e-07
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 138 LVSCKWEVKFCLAKLVPVKKPTSDHVPICL 227
           + S  W  +F  A +  +  P+SDH P+ L
Sbjct: 180 VASPAWSSRFPQAVITHLTTPSSDHAPLLL 209


>dbj|GAU34840.1| hypothetical protein TSUD_259200 [Trifolium subterraneum]
          Length = 1122

 Score = 48.1 bits (113), Expect(3) = 5e-07
 Identities = 28/108 (25%), Positives = 49/108 (45%)
 Frame = +2

Query: 263 FRFERMWLEEEDIGAIIRESWA*PTSASDAVGNXXXXXXXXXXVLSKREKRHNQKFLDSI 442
           FRFE +WL+EED+  ++ +SW    SA+  +               ++  R  Q+ +D  
Sbjct: 117 FRFENIWLKEEDLAEVVEDSWR-EGSATGIINKVSHCADRLQEWGKRKRMRFKQEIIDCG 175

Query: 443 DILEKLDEFRVLLDQEAIELVDHHHELIEIFKREEIMWGQRAQCLWLK 586
           + +E+L      ++          H  + +  +EE  W QRA+  WLK
Sbjct: 176 EEMERLRGGHDPINSARYREAQEKH--VRMLVQEETYWRQRAKMHWLK 221



 Score = 31.2 bits (69), Expect(3) = 5e-07
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +1

Query: 586 GDVTTVFFHKFASMRRKINSIDSLESEDGS 675
           GD+ T FFH  AS+R K   +D L +ED +
Sbjct: 223 GDLNTKFFHLSASIRSKAKRLDRLITEDNT 252



 Score = 22.7 bits (47), Expect(3) = 5e-07
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +3

Query: 138 LVSCKWEVKFCLAKLVPVKKPTSDHVPICL*SGKILSSVN 257
           LVS  W + F  A+L  +    SDH PI L S     + N
Sbjct: 74  LVSTDWLMLFPDARLRNLITSHSDHSPILLQSSPATKNSN 113


>dbj|GAU39014.1| hypothetical protein TSUD_378900 [Trifolium subterraneum]
          Length = 758

 Score = 43.1 bits (100), Expect(3) = 5e-07
 Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
 Frame = +2

Query: 224 PLVWENIKFCKRLFRFERMWLEEEDIGAIIRESWA*PTSASDAVGNXXXXXXXXXXVLSK 403
           P++ ++ K+    F+FE  WL+EEDIG ++ E W        A  +           L +
Sbjct: 190 PMIRQHYKY---EFKFENSWLKEEDIGEVVDEGW-----RKGAGLDIVHRLTQCANQLQR 241

Query: 404 REKRHNQKFLDSIDILEKLDEFRVLLDQEAIELV---DHHHELIEIFKREEIMWGQRAQC 574
             +R  ++F + I ++ + +  R    ++A E+    +   +  +   +EE  W QRA+ 
Sbjct: 242 WGRRKRKRFKEEI-MMHEAEMARSRDQRDATEIARFQEAQKQHAKFLVQEEAFWRQRAKM 300

Query: 575 LWLK 586
            WLK
Sbjct: 301 NWLK 304



 Score = 30.0 bits (66), Expect(3) = 5e-07
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +1

Query: 586 GDVTTVFFHKFASMRRKINSIDSLESEDGSL 678
           GD+ T FFH  A+ R K+  I+ L++++  +
Sbjct: 306 GDLNTKFFHMSATTRAKVKKIEKLKNDENEV 336



 Score = 28.9 bits (63), Expect(3) = 5e-07
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +3

Query: 138 LVSCKWEVKFCLAKLVPVKKPTSDHVPICL 227
           LVS +W  KF  AKL+ +    SDH PI L
Sbjct: 157 LVSSEWLYKFPDAKLINLVSSHSDHSPILL 186


>gb|PNX80358.1| ribonuclease H, partial [Trifolium pratense]
          Length = 700

 Score = 49.7 bits (117), Expect(3) = 5e-07
 Identities = 34/108 (31%), Positives = 48/108 (44%)
 Frame = +2

Query: 263 FRFERMWLEEEDIGAIIRESWA*PTSASDAVGNXXXXXXXXXXVLSKREKRHNQKFLDSI 442
           FRFE +WL+EEDI  ++   W    SA D                 ++  R  Q+ L+  
Sbjct: 92  FRFENIWLKEEDIDEVVEAGWGRERSA-DITSKTSRCAEKLRNWGRRKRMRFKQEVLECS 150

Query: 443 DILEKLDEFRVLLDQEAIELVDHHHELIEIFKREEIMWGQRAQCLWLK 586
           + LE+L     L      + V   H  + I  +EEI W QRA+  WLK
Sbjct: 151 EELERLRGRHDLAGSGRYKEVQEKHARLLI--QEEIYWKQRAKMHWLK 196



 Score = 27.3 bits (59), Expect(3) = 5e-07
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 586 GDVTTVFFHKFASMRRKINSIDSLESED 669
           GD+ T FFH  AS R++   I+ L + D
Sbjct: 198 GDMNTKFFHMSASTRQRKKKIEKLVNAD 225



 Score = 25.0 bits (53), Expect(3) = 5e-07
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 138 LVSCKWEVKFCLAKLVPVKKPTSDHVPICL*SGKILSSVN 257
           + + KW + +   KL+ +    SDH PI L S  ++ + N
Sbjct: 49  MANSKWLMNYPNVKLLNLLASHSDHSPILLQSSPVIRNGN 88