BLASTX nr result

ID: Ophiopogon22_contig00025338 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00025338
         (581 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PRQ23654.1| putative laccase [Rosa chinensis]                       52   6e-06
gb|PRQ23705.1| putative laccase [Rosa chinensis]                       55   9e-06

>gb|PRQ23654.1| putative laccase [Rosa chinensis]
          Length = 58

 Score = 52.0 bits (123), Expect = 6e-06
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = +2

Query: 503 QVVVKNVSRLCHAKPIVTVNGMYPGP 580
           Q+ VKNVSRLCH KPIVTVNGM+PGP
Sbjct: 7   QIQVKNVSRLCHPKPIVTVNGMFPGP 32


>gb|PRQ23705.1| putative laccase [Rosa chinensis]
          Length = 193

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 27/50 (54%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
 Frame = +2

Query: 440 LRLLRC---ILFCSCRGCLLVLTDQVVVKNVSRLCHAKPIVTVNGMYPGP 580
           LRL  C     F   +  L      + VKNVSRLCH+KPIVTVNGM+PGP
Sbjct: 12  LRLFSCSVAFFFIPAKAALKTYQFDIQVKNVSRLCHSKPIVTVNGMFPGP 61


Top