BLASTX nr result
ID: Ophiopogon22_contig00025291
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00025291
(1188 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020255709.1| uncharacterized protein LOC109832716 [Aspara... 62 1e-13
gb|PRQ47582.1| putative RNA-directed DNA polymerase [Rosa chinen... 47 7e-07
gb|PRQ42045.1| putative RNA-directed DNA polymerase [Rosa chinen... 45 2e-06
gb|PRQ58292.1| putative RNA-directed DNA polymerase [Rosa chinen... 47 2e-06
gb|PRQ29101.1| putative RNA-directed DNA polymerase [Rosa chinen... 46 3e-06
ref|XP_020259107.1| uncharacterized protein LOC109835550 [Aspara... 46 3e-06
gb|PRQ21141.1| putative RNA-directed DNA polymerase [Rosa chinen... 46 3e-06
gb|PRQ42794.1| putative RNA-directed DNA polymerase [Rosa chinen... 44 6e-06
>ref|XP_020255709.1| uncharacterized protein LOC109832716 [Asparagus officinalis]
Length = 285
Score = 62.0 bits (149), Expect(2) = 1e-13
Identities = 33/57 (57%), Positives = 37/57 (64%)
Frame = -1
Query: 357 KVTLFPLYYVFKDLTTEMRID*KRKR*HMYYLDDNAPTTAPTVGLVASQPDPTLLWH 187
KVT FP Y VF+DL T M I +R MYYLDD + P GLVA+QPD TLLWH
Sbjct: 233 KVTFFPSYCVFQDLATGMTIGSGHERGGMYYLDD----SVPGAGLVAAQPDSTLLWH 285
Score = 44.3 bits (103), Expect(2) = 1e-13
Identities = 24/41 (58%), Positives = 26/41 (63%)
Frame = -2
Query: 497 IVAGTHSPVLSTGVVRDALSLTLANVLYVPKFSVSLLSIKQ 375
I GT SPV GVV SL L +VLY PKF VSLLSI +
Sbjct: 185 IADGTLSPVFDAGVVHTTSSLKLNDVLYAPKFPVSLLSISK 225
>gb|PRQ47582.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1175
Score = 47.4 bits (111), Expect(2) = 7e-07
Identities = 39/131 (29%), Positives = 51/131 (38%), Gaps = 12/131 (9%)
Frame = -1
Query: 360 CKVTLFPLYYVFKDLTTEMRID*KRKR*HMYYLD--------DNAPTTAPTVGLVASQPD 205
C VT FPLY +F+DL T I R +++LD + A A V +Q +
Sbjct: 181 CSVTFFPLYVIFQDLLTREIIGRGYLRGRLFHLDCMFAGMKPEKAVQAALISTGVTNQVE 240
Query: 204 PTLLWH*RLGHHXXXXXXXXXXXXXXXXX*G----VSCVLGKHCCATYQ*CR*KQ*FCI* 37
LWH RLGH SCVL K +Y +
Sbjct: 241 ELWLWHRRLGHPSFSVMKKSMPSLFLGIDESKLHCESCVLAKSHRTSYPLSTTRSSSPFE 300
Query: 36 VVHSDVWSPCR 4
++HSDVW P R
Sbjct: 301 LIHSDVWGPSR 311
Score = 35.8 bits (81), Expect(2) = 7e-07
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = -2
Query: 488 GTHSPVLSTGVVRDALSLTLANVLYVPKFSVSLLSIKQV 372
G PVL G VR SLTL +VLYVP S L+S+ Q+
Sbjct: 137 GDSFPVLGIGSVRLTPSLTLHDVLYVPDLSHHLISVPQL 175
>gb|PRQ42045.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1226
Score = 45.4 bits (106), Expect(2) = 2e-06
Identities = 38/130 (29%), Positives = 51/130 (39%), Gaps = 11/130 (8%)
Frame = -1
Query: 360 CKVTLFPLYYVFKDLTTEMRID*KRKR*HMYYLDD----NAPTTAPTVGLVAS--QPDPT 199
C +T +P+Y +F+DL T I R +++LD P L ++ Q
Sbjct: 197 CSITFYPMYVIFQDLLTRELIGRGYLRGRLFHLDQTYAGEKPGAQSRTALTSNSDQLSEI 256
Query: 198 LLWH*RLGHHXXXXXXXXXXXXXXXXX*GV----SCVLGKHCCATYQ*C-R*KQ*FCI*V 34
LWH RLGH V +CVL K ATY K +
Sbjct: 257 WLWHRRLGHPSFSLMKKSMPTLFIGVNESVLRCETCVLAKSHRATYSPSFSNKSVIPFEL 316
Query: 33 VHSDVWSPCR 4
+HSDVW P R
Sbjct: 317 IHSDVWGPSR 326
Score = 36.2 bits (82), Expect(2) = 2e-06
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -2
Query: 488 GTHSPVLSTGVVRDALSLTLANVLYVPKFSVSLLSIKQV 372
G PVL TG +R +L L NVLYVP S L+S+ Q+
Sbjct: 153 GEAFPVLGTGSIRITPTLQLHNVLYVPDLSHHLISVPQL 191
>gb|PRQ58292.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 480
Score = 46.6 bits (109), Expect(2) = 2e-06
Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 12/131 (9%)
Frame = -1
Query: 360 CKVTLFPLYYVFKDLTTEMRID*KRKR*HMYYLDD-------NAPTTAPTVGLVASQPDP 202
C VT +P+Y +F+DL T I R +++LD AP+ A + L + +
Sbjct: 91 CSVTFYPMYVMFQDLLTRELIGRGYLRGRLFHLDQTYAGEKPGAPSRA-ALTLNSDKLSE 149
Query: 201 TLLWH*RLGHHXXXXXXXXXXXXXXXXX*GV----SCVLGKHCCATYQ-*CR*KQ*FCI* 37
LWH RLGH V +CVL K ATY K
Sbjct: 150 VWLWHRRLGHPSFSLMRKTMPTLFIGVDESVLHCETCVLAKSHRATYSPSISNKSVIPFE 209
Query: 36 VVHSDVWSPCR 4
++HSDVW P R
Sbjct: 210 LIHSDVWGPSR 220
Score = 35.0 bits (79), Expect(2) = 2e-06
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -2
Query: 488 GTHSPVLSTGVVRDALSLTLANVLYVPKFSVSLLSIKQV 372
G PVL +G VR +L L NVLYVP S L+S+ Q+
Sbjct: 47 GEAFPVLGSGSVRITPTLELHNVLYVPDLSHHLISVPQL 85
>gb|PRQ29101.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 629
Score = 45.8 bits (107), Expect(2) = 3e-06
Identities = 36/130 (27%), Positives = 51/130 (39%), Gaps = 11/130 (8%)
Frame = -1
Query: 360 CKVTLFPLYYVFKDLTTEMRID*KRKR*HMYYLDDNAPTTAP------TVGLVASQPDPT 199
C VT +P+Y +F+DL T + R +++LD P + + + +
Sbjct: 437 CSVTFYPMYVIFQDLLTREIVGRGYLRGRLFHLDQTYAGEKPGAQSRAALTSTSDKLNEI 496
Query: 198 LLWH*RLGHHXXXXXXXXXXXXXXXXX*GV----SCVLGKHCCATYQ-*CR*KQ*FCI*V 34
LWH RLGH V +CVL K CATY K +
Sbjct: 497 WLWHRRLGHPSFSLMKKTMPTLFIGVDESVLHCETCVLAKSHCATYSPSISNKSIIPFEL 556
Query: 33 VHSDVWSPCR 4
+HS VW P R
Sbjct: 557 IHSYVWGPSR 566
Score = 35.4 bits (80), Expect(2) = 3e-06
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = -2
Query: 494 VAGTHSPVLSTGVVRDALSLTLANVLYVPKFSVSLLSIKQV 372
V G PVL +G VR +L L NVLYVP S L+S+ Q+
Sbjct: 391 VNGEAFPVLRSGSVRITPTLELHNVLYVPDLSHHLISVPQL 431
>ref|XP_020259107.1| uncharacterized protein LOC109835550 [Asparagus officinalis]
Length = 464
Score = 46.2 bits (108), Expect(2) = 3e-06
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = -2
Query: 497 IVAGTHSPVLSTGVVRDALSLTLANVLYVPKFSVSLLSIKQ 375
I GT SPVL GVV SL L +VLY PKF VSLLSI +
Sbjct: 393 IADGTLSPVLGAGVVHATSSLKLTDVLYAPKFPVSLLSISK 433
Score = 35.0 bits (79), Expect(2) = 3e-06
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -1
Query: 366 DTCKVTLFPLYYVFKDLTTEMRI 298
+ CKVT FP Y VF+DLTT M I
Sbjct: 438 NNCKVTFFPFYCVFQDLTTGMTI 460
>gb|PRQ21141.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 476
Score = 45.8 bits (107), Expect(2) = 3e-06
Identities = 37/130 (28%), Positives = 51/130 (39%), Gaps = 11/130 (8%)
Frame = -1
Query: 360 CKVTLFPLYYVFKDLTTEMRID*KRKR*HMYYLDD----NAPTTAPTVGLVASQP--DPT 199
C VT +P+Y +F+DL T ++ R +++LD P V L ++
Sbjct: 129 CSVTFYPMYVIFQDLLTREKVGQGYLRGRLFHLDQTYAGEKPGAQSLVALTSNSDKISEI 188
Query: 198 LLWH*RLGHHXXXXXXXXXXXXXXXXX*GV----SCVLGKHCCATYQ-*CR*KQ*FCI*V 34
LWH RLGH +CVL K ATY K +
Sbjct: 189 WLWHRRLGHPPFSLMKTTMPTLFIGVNESALRCETCVLAKSHRATYSPRVSNKSVIPFEL 248
Query: 33 VHSDVWSPCR 4
+HSDVW P R
Sbjct: 249 IHSDVWGPSR 258
Score = 35.0 bits (79), Expect(2) = 3e-06
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -2
Query: 488 GTHSPVLSTGVVRDALSLTLANVLYVPKFSVSLLSIKQV 372
G PVL +G VR +L L NVLYVP S L+S+ Q+
Sbjct: 85 GEAFPVLGSGSVRITPTLELHNVLYVPDLSHHLISVPQL 123
>gb|PRQ42794.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1226
Score = 43.9 bits (102), Expect(2) = 6e-06
Identities = 37/130 (28%), Positives = 50/130 (38%), Gaps = 11/130 (8%)
Frame = -1
Query: 360 CKVTLFPLYYVFKDLTTEMRID*KRKR*HMYYLDD----NAPTTAPTVGLVASQP--DPT 199
C +T +P+Y +F+DL T I R +++LD P L ++
Sbjct: 197 CSITFYPMYVIFQDLLTRELIGRGYLRGRLFHLDQTYAGEKPGAQSRTALTSNSDKLSEV 256
Query: 198 LLWH*RLGHHXXXXXXXXXXXXXXXXX*GV----SCVLGKHCCATYQ*C-R*KQ*FCI*V 34
LWH RLGH V +CVL K ATY K +
Sbjct: 257 WLWHRRLGHPSFSLMKKSMPTLFIGVNESVLRCETCVLAKSHRATYPPSFSNKTVIPFEL 316
Query: 33 VHSDVWSPCR 4
+HSDVW P R
Sbjct: 317 IHSDVWGPSR 326
Score = 36.2 bits (82), Expect(2) = 6e-06
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -2
Query: 488 GTHSPVLSTGVVRDALSLTLANVLYVPKFSVSLLSIKQV 372
G PVL TG +R +L L NVLYVP S L+S+ Q+
Sbjct: 153 GEAFPVLGTGSIRITPTLQLHNVLYVPDLSHHLISVPQL 191