BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00025133
         (1334 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020265555.1| RNA pseudouridine synthase 4, mitochondrial ...   630   0.0  
ref|XP_008812838.1| PREDICTED: RNA pseudouridine synthase 4, mit...   506   e-174
ref|XP_010943215.1| PREDICTED: RNA pseudouridine synthase 4, mit...   498   e-171
ref|XP_009396599.1| PREDICTED: RNA pseudouridine synthase 4, mit...   494   e-169
ref|XP_010943216.1| PREDICTED: RNA pseudouridine synthase 4, mit...   489   e-168
ref|XP_020685526.1| RNA pseudouridine synthase 4, mitochondrial-...   487   e-167
ref|XP_020592024.1| RNA pseudouridine synthase 4, mitochondrial ...   471   e-161
ref|XP_020592023.1| RNA pseudouridine synthase 4, mitochondrial ...   471   e-161
ref|XP_020592022.1| RNA pseudouridine synthase 4, mitochondrial ...   471   e-161
ref|XP_020592021.1| RNA pseudouridine synthase 4, mitochondrial ...   471   e-161
ref|XP_020592020.1| RNA pseudouridine synthase 4, mitochondrial ...   471   e-161
gb|PKA54095.1| RNA pseudouridine synthase 4, mitochondrial [Apos...   461   e-157
ref|XP_010271251.1| PREDICTED: RNA pseudouridine synthase 4, mit...   460   e-156
ref|XP_018827853.1| PREDICTED: RNA pseudouridine synthase 4, mit...   460   e-156
ref|XP_015892750.1| PREDICTED: RNA pseudouridine synthase 4, mit...   459   e-155
ref|XP_023924555.1| RNA pseudouridine synthase 4, mitochondrial ...   458   e-155
ref|XP_002282614.1| PREDICTED: RNA pseudouridine synthase 4, mit...   454   e-154
ref|XP_022749157.1| RNA pseudouridine synthase 4, mitochondrial ...   454   e-154
ref|XP_007199810.1| RNA pseudouridine synthase 4, mitochondrial ...   454   e-154
ref|XP_019225818.1| PREDICTED: RNA pseudouridine synthase 4, mit...   453   e-154

>ref|XP_020265555.1| RNA pseudouridine synthase 4, mitochondrial [Asparagus officinalis]
 gb|ONK70293.1| uncharacterized protein A4U43_C05F32240 [Asparagus officinalis]
          Length = 453

 Score =  630 bits (1624), Expect = 0.0
 Identities = 321/429 (74%), Positives = 362/429 (84%)
 Frame = -1

Query: 1289 RTALSSTTFQILRSSTLLHRSPYSHXXXXXXAEEREHTNGDDTFQKWVTLPPFAPHMDAP 1110
            R+  SS+TFQ+LRS   L+ +  S        ++RE   G D F KWVTLPPF+P MDA 
Sbjct: 14   RSQTSSSTFQVLRS---LYSATTS--------QDREQA-GQDNFHKWVTLPPFSPQMDAS 61

Query: 1109 SIGKEIAGRKTMGKGEPVTALKWVRRCCPHLPASLVQKLFRLRQVRKELVDSAGDCAEAE 930
            SIG+EIAGR  +G+GEP+TALKWVRRCCP LP SLVQKLFRLRQVRKEL +S     E E
Sbjct: 62   SIGREIAGRNPIGRGEPITALKWVRRCCPQLPMSLVQKLFRLRQVRKELANSNQLFTEEE 121

Query: 929  AKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDCSTDETEVGFIRSLVLYKDPAIIV 750
             KQ K KRVSAKDTL SGD+ILLPITVQ+LV ETKD S++E EV F+RSLVLYKDP IIV
Sbjct: 122  VKQKKIKRVSAKDTLDSGDVILLPITVQELVPETKDSSSNEDEVKFMRSLVLYKDPDIIV 181

Query: 749  INKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRESSGILVMGRTQTSASI 570
            +NKPPG+PVQGGVGIK+S+D L AM+LKYDYSEPPRLVHRLDRESSG+LV+GRTQTSA+I
Sbjct: 182  LNKPPGLPVQGGVGIKYSVDALAAMALKYDYSEPPRLVHRLDRESSGVLVLGRTQTSAAI 241

Query: 569  LHTIFREKTSGVGVNDIESIQRALQKKYWALVIGTPRLSKGRIPAPLAKIVLEDGKSDRI 390
            LH+IFR+KTS V  ND+  +Q+ LQKKYWALVIG PRL KG I APLAKIVLEDGKSDRI
Sbjct: 242  LHSIFRDKTSEVESNDVNDVQKVLQKKYWALVIGIPRLLKGLISAPLAKIVLEDGKSDRI 301

Query: 389  TIARDESTPSQHALTEYKVIRSAHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYG 210
            TIARD STPSQHALTEYKVIRSA+GY+WLEL PLTGRKHQLRVHCAEALGTPIVGDYKYG
Sbjct: 302  TIARDVSTPSQHALTEYKVIRSANGYSWLELHPLTGRKHQLRVHCAEALGTPIVGDYKYG 361

Query: 209  WKAHRNLEPMPCVQPKVEHHELPFGLESGGGSISDKQPRLHLHCREMILPNIATALQQLE 30
            WKAHRNLEP+P +Q + EH  LPFGLES GGSISDK+PR+HLHCREM LPNIA+A+QQLE
Sbjct: 362  WKAHRNLEPVPSLQSEFEHEMLPFGLESQGGSISDKEPRMHLHCREMTLPNIASAMQQLE 421

Query: 29   PSSSSNLDL 3
              SS+NLDL
Sbjct: 422  --SSTNLDL 428


>ref|XP_008812838.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Phoenix
            dactylifera]
          Length = 476

 Score =  506 bits (1303), Expect = e-174
 Identities = 261/395 (66%), Positives = 308/395 (77%), Gaps = 7/395 (1%)
 Frame = -1

Query: 1184 EHTNGDDTFQKWVTLPPFAPHMDAPSIGKEIA-GRKTMGKGEPVTALKWVRRCCPHLPAS 1008
            E   G     +W+TLPPFAP +DA S+GK IA GR+  G GEP TALKWVRRCC HLP S
Sbjct: 51   EEAGGGQQKGRWLTLPPFAPPVDASSVGKAIARGRRPAGDGEPTTALKWVRRCCSHLPMS 110

Query: 1007 LVQKLFRLRQVRKELVDSAGDCAEAEAKQNKPKRVSAKDTLVSGDIILLPITVQKLVTET 828
            LVQKLFRLRQVR++L  + G   ++ + Q + +RVSAKD ++ GD+ILLP+TVQ + T+ 
Sbjct: 111  LVQKLFRLRQVRRDLTKN-GSNMDSHSAQQQLRRVSAKDVMMPGDVILLPVTVQNVATKK 169

Query: 827  KDCSTDETEVGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEP 648
             D S  E E+ FI SL LYKD AII +NKPPGMPVQGGVGIK+SMD L A S KYD+ E 
Sbjct: 170  YDYSESEKEISFIHSLELYKDSAIIAVNKPPGMPVQGGVGIKYSMDALAAKSFKYDFPES 229

Query: 647  PRLVHRLDRESSGILVMGRTQTSASILHTIFREKTSGVGVNDIESIQRALQKKYWALVIG 468
            PRLVHRLDR+SSG+LV+GRTQTSA ILH+IFREKTSG   +DI++ +R LQ+KY ALVIG
Sbjct: 230  PRLVHRLDRDSSGVLVLGRTQTSALILHSIFREKTSGALSDDIKTTRRTLQRKYLALVIG 289

Query: 467  TPRLSKGRIPAPLAKIVLEDGKSDRITIAR-DESTPSQHALTEYKVIR-SAHGYTWLELR 294
            TP+ SKG I APLAKIVLEDGKS+RITI    +ST S HALTEY+VIR SAHG+TWLEL 
Sbjct: 290  TPKHSKGLISAPLAKIVLEDGKSERITIVMGTKSTSSHHALTEYRVIRSSAHGFTWLELC 349

Query: 293  PLTGRKHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQPKVEHHEL----PFGLES 126
            PLTGRKHQLRVHCAEALGTPIVGDYKYGW AHR  EPMP  +   E  +L    PFGL+ 
Sbjct: 350  PLTGRKHQLRVHCAEALGTPIVGDYKYGWYAHRKWEPMPWPESMSEDEKLPKKRPFGLDL 409

Query: 125  GGGSISDKQPRLHLHCREMILPNIATALQQLEPSS 21
             GGSI++KQP LHLHC++MILPNI+ AL QL+ S+
Sbjct: 410  DGGSIAEKQPYLHLHCKQMILPNISAALCQLQSSA 444


>ref|XP_010943215.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
            [Elaeis guineensis]
          Length = 478

 Score =  498 bits (1282), Expect = e-171
 Identities = 272/453 (60%), Positives = 325/453 (71%), Gaps = 22/453 (4%)
 Frame = -1

Query: 1313 MAGL------HLRRRTALSSTTFQIL--------RSSTLLHRSPYSHXXXXXXAEEREHT 1176
            MAGL      HL  RT + +TT +++         ++T+   S YS          +E  
Sbjct: 1    MAGLVGLGRRHLSSRTRVLATTLELIVAVFQRCSYTTTIAASSSYSSAREEEAGWRKEKG 60

Query: 1175 NGDDTFQKWVTLPPFAPHMDAPSIGKEIA-GRKTMGKGEPVTALKWVRRCCPHLPASLVQ 999
                   +W+TLPPFAP +DA  + K IA G++  G+ EP TALKWVRRCCPHLP SLVQ
Sbjct: 61   -------RWLTLPPFAPPVDASYVRKAIASGQRPAGEEEPTTALKWVRRCCPHLPMSLVQ 113

Query: 998  KLFRLRQVRKELVDSAGDCAEAEAKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDC 819
            KLFRLRQVR++L  + G   +    Q + +RVSAKD ++ GD+ILLP+TVQ + T+  D 
Sbjct: 114  KLFRLRQVRRDLTKN-GSHMDGYYGQQQLRRVSAKDVMMPGDVILLPVTVQNVATKKYDY 172

Query: 818  STDETEVGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRL 639
            S  E E+ FIRSL LYKD AII +NKPPGMPVQGGVGIK+SMD L A S KYDY E PRL
Sbjct: 173  SESEEEISFIRSLELYKDSAIIAVNKPPGMPVQGGVGIKYSMDALAAKSFKYDYPESPRL 232

Query: 638  VHRLDRESSGILVMGRTQTSASILHTIFREKTSGVGVNDIESIQRALQKKYWALVIGTPR 459
            VHRLDR+SSG+LV+GRTQTSA +LH+IFREKTSG   +DI++  RALQ+KY ALVIGTP+
Sbjct: 233  VHRLDRDSSGVLVLGRTQTSALVLHSIFREKTSGALSDDIKTTCRALQRKYLALVIGTPK 292

Query: 458  LSKGRIPAPLAKIVLEDGKSDRITIARDEST-PSQHALTEYKVIR-SAHGYTWLELRPLT 285
              KG I APL KIVLEDGKS+RITI +D  T  S HALTEY+VIR SAHG+TWLEL PLT
Sbjct: 293  RWKGLISAPLTKIVLEDGKSERITIVKDTKTASSHHALTEYQVIRSSAHGFTWLELCPLT 352

Query: 284  GRKHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQPKVEHHEL-----PFGLESGG 120
            GRKHQLRVH AEALGTPIVGDYKYGW AHR  EPMP  +   E  +L     PFGLE  G
Sbjct: 353  GRKHQLRVHLAEALGTPIVGDYKYGWYAHRKWEPMPWPESMSEDEKLPKNKPPFGLELDG 412

Query: 119  GSISDKQPRLHLHCREMILPNIATALQQLEPSS 21
            GSI++KQP LHLHC++MILPNI+ AL QL+ SS
Sbjct: 413  GSIAEKQPFLHLHCKQMILPNISAALWQLQSSS 445


>ref|XP_009396599.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Musa
            acuminata subsp. malaccensis]
          Length = 469

 Score =  494 bits (1271), Expect = e-169
 Identities = 264/435 (60%), Positives = 324/435 (74%), Gaps = 10/435 (2%)
 Frame = -1

Query: 1295 RRRTALSSTTFQILRSSTLLHRSPYSHXXXXXXAEEREHTNGDDTFQKWVTLPPFAPHMD 1116
            RR ++  S++ +IL  S++L RS +S        E+ E         KW+TLPPF+P +D
Sbjct: 11   RRLSSAPSSSARIL--SSVLLRSLHSAAPASSLIEQHEPIKPKG---KWLTLPPFSPPID 65

Query: 1115 APSIGKEIAGRKTMGKGEPVTALKWVRRCCPHLPASLVQKLFRLRQVRKELVDSA---GD 945
              S+GKE+AGR+ + + EP++ALKWVRRCCPHLP SLV KLFRLRQVR++        G+
Sbjct: 66   CVSVGKELAGRRPVAETEPMSALKWVRRCCPHLPMSLVHKLFRLRQVRRDQTAQVVYNGN 125

Query: 944  CAEAEAKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDCST-DETEVGFIRSLVLYK 768
               AE  Q + +RVS KD ++ G++I LP++VQ L TE    S  ++ E+ F+RSL LYK
Sbjct: 126  ATPAE--QGRLRRVSVKDAMMPGEVIFLPVSVQNLTTEGSYRSKYNDVEISFVRSLELYK 183

Query: 767  DPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRESSGILVMGRT 588
            D AIIV+NKPPGMPVQGGVGI++SMD L A  LKY+ SEPPRLVHRLDR+SSG+LV+GRT
Sbjct: 184  DEAIIVVNKPPGMPVQGGVGIRYSMDALAANCLKYECSEPPRLVHRLDRDSSGVLVLGRT 243

Query: 587  QTSASILHTIFREKTSGVGVNDIESIQRALQKKYWALVIGTPRLSKGRIPAPLAKIVLED 408
            QTSA+ILH++FREKTSG   +DI   QR LQ+KY ALVIGTPR SKG I APLAKIVLED
Sbjct: 244  QTSATILHSLFREKTSGALADDINVTQRPLQRKYLALVIGTPRHSKGLISAPLAKIVLED 303

Query: 407  GKSDRITIARD-ESTPSQHALTEYKVIRSAHGYTWLELRPLTGRKHQLRVHCAEALGTPI 231
            GKS+RI IA D +S  SQHALTEYKVIRS+H YTWLEL PLTGRKHQLRVHCAE LGTPI
Sbjct: 304  GKSERIIIADDGKSASSQHALTEYKVIRSSHDYTWLELFPLTGRKHQLRVHCAEVLGTPI 363

Query: 230  VGDYKYGWKAHRNLEPMPCVQ-----PKVEHHELPFGLESGGGSISDKQPRLHLHCREMI 66
            VGD+KYG  AHR  EPM   +      K+   +LPFGLE  GGSIS+K P LHLHC++M+
Sbjct: 364  VGDHKYGRHAHRKWEPMRLPESIIKGEKIPKEKLPFGLELDGGSISEKLPGLHLHCKQMV 423

Query: 65   LPNIATALQQLEPSS 21
            LPNI+ ALQQL+ S+
Sbjct: 424  LPNISVALQQLQSST 438


>ref|XP_010943216.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
            [Elaeis guineensis]
          Length = 475

 Score =  489 bits (1259), Expect = e-168
 Identities = 271/453 (59%), Positives = 324/453 (71%), Gaps = 22/453 (4%)
 Frame = -1

Query: 1313 MAGL------HLRRRTALSSTTFQIL--------RSSTLLHRSPYSHXXXXXXAEEREHT 1176
            MAGL      HL  RT + +TT +++         ++T+   S YS          +E  
Sbjct: 1    MAGLVGLGRRHLSSRTRVLATTLELIVAVFQRCSYTTTIAASSSYSSAREEEAGWRKEKG 60

Query: 1175 NGDDTFQKWVTLPPFAPHMDAPSIGKEIA-GRKTMGKGEPVTALKWVRRCCPHLPASLVQ 999
                   +W+TLPPFAP +DA  + K IA G++  G+ EP TALKWVRRCCPHLP SLVQ
Sbjct: 61   -------RWLTLPPFAPPVDASYVRKAIASGQRPAGEEEPTTALKWVRRCCPHLPMSLVQ 113

Query: 998  KLFRLRQVRKELVDSAGDCAEAEAKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDC 819
            KLFRLRQVR++L  + G   +    Q + +RVSAKD ++ GD+ILLP+TVQ + T+  D 
Sbjct: 114  KLFRLRQVRRDLTKN-GSHMDGYYGQQQLRRVSAKDVMMPGDVILLPVTVQNVATKKYDY 172

Query: 818  STDETEVGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRL 639
            S  E E+ FIRSL LYKD AII +NKPPGMPVQGGVGIK+SMD L A S KYDY E PRL
Sbjct: 173  SESEEEISFIRSLELYKDSAIIAVNKPPGMPVQGGVGIKYSMDALAAKSFKYDYPESPRL 232

Query: 638  VHRLDRESSGILVMGRTQTSASILHTIFREKTSGVGVNDIESIQRALQKKYWALVIGTPR 459
            VHRLDR+SSG+LV+GRTQTSA +LH+IFREKTSG  ++D  +  RALQ+KY ALVIGTP+
Sbjct: 233  VHRLDRDSSGVLVLGRTQTSALVLHSIFREKTSG-ALSD--TTCRALQRKYLALVIGTPK 289

Query: 458  LSKGRIPAPLAKIVLEDGKSDRITIARDEST-PSQHALTEYKVIR-SAHGYTWLELRPLT 285
              KG I APL KIVLEDGKS+RITI +D  T  S HALTEY+VIR SAHG+TWLEL PLT
Sbjct: 290  RWKGLISAPLTKIVLEDGKSERITIVKDTKTASSHHALTEYQVIRSSAHGFTWLELCPLT 349

Query: 284  GRKHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQPKVEHHEL-----PFGLESGG 120
            GRKHQLRVH AEALGTPIVGDYKYGW AHR  EPMP  +   E  +L     PFGLE  G
Sbjct: 350  GRKHQLRVHLAEALGTPIVGDYKYGWYAHRKWEPMPWPESMSEDEKLPKNKPPFGLELDG 409

Query: 119  GSISDKQPRLHLHCREMILPNIATALQQLEPSS 21
            GSI++KQP LHLHC++MILPNI+ AL QL+ SS
Sbjct: 410  GSIAEKQPFLHLHCKQMILPNISAALWQLQSSS 442


>ref|XP_020685526.1| RNA pseudouridine synthase 4, mitochondrial-like [Dendrobium
            catenatum]
          Length = 468

 Score =  487 bits (1253), Expect = e-167
 Identities = 246/396 (62%), Positives = 303/396 (76%), Gaps = 5/396 (1%)
 Frame = -1

Query: 1175 NGDDTFQK----WVTLPPFAPHMDAPSIGKEIAGRKTMGKGEPVTALKWVRRCCPHLPAS 1008
            NGD+  +K    W+TLPPFAP  D  S+ KEIAG    G GE  TALKWVR C PHLP S
Sbjct: 49   NGDEQRRKEGGKWLTLPPFAPQKDPSSVAKEIAGGTPAGDGEITTALKWVRHCVPHLPMS 108

Query: 1007 LVQKLFRLRQVRKELVDSAGDCAEAEAKQNKPKRVSAKDTLVSGDIILLPITVQKLVTET 828
            LVQKLFRLRQVRK+LV S    +  + + ++ KRVSAK+ + SG++ILLPITV+    + 
Sbjct: 109  LVQKLFRLRQVRKDLV-SINASSRVQFEGHQLKRVSAKEVMTSGEVILLPITVKNFTKKD 167

Query: 827  KDCSTDETEVGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEP 648
            K+   +  E+ FIRSL+LYKD AIIVINKP G+P QGG GIK+S+DVL A SLK+D  E 
Sbjct: 168  KEQRDNHKEIKFIRSLILYKDSAIIVINKPHGLPTQGGFGIKNSIDVLAATSLKFDCPES 227

Query: 647  PRLVHRLDRESSGILVMGRTQTSASILHTIFREKTSGVGVNDIESIQRALQKKYWALVIG 468
            P+LVHRLDR+ SG+LV+GRTQ S+SILH+IFREKTS V  + +++  R LQ+KYWALVIG
Sbjct: 228  PKLVHRLDRDCSGLLVLGRTQISSSILHSIFREKTSRVLKHSVKNASRVLQRKYWALVIG 287

Query: 467  TPRLSKGRIPAPLAKIVLEDGKSDRITIARDESTPSQHALTEYKVIRSAHGYTWLELRPL 288
            TP+ S G + AP+ KIVLEDGKS+RIT+ ++    SQHALTEYKVI++++GYTWLEL PL
Sbjct: 288  TPKHSSGLLSAPIGKIVLEDGKSERITVIKERPASSQHALTEYKVIKTSNGYTWLELCPL 347

Query: 287  TGRKHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQ-PKVEHHELPFGLESGGGSI 111
            TGRKHQLRVHCAE L TPIVGDYKYGW AH+  EP+   +  K+   +LPFGL+   GSI
Sbjct: 348  TGRKHQLRVHCAEVLRTPIVGDYKYGWHAHKKWEPIVIAKTAKLPKEKLPFGLDFESGSI 407

Query: 110  SDKQPRLHLHCREMILPNIATALQQLEPSSSSNLDL 3
            S+KQPRLHLHCR+MILPNIA A+Q LEP S++N DL
Sbjct: 408  SEKQPRLHLHCRQMILPNIAEAVQHLEPLSTTNCDL 443


>ref|XP_020592024.1| RNA pseudouridine synthase 4, mitochondrial isoform X5 [Phalaenopsis
            equestris]
          Length = 452

 Score =  471 bits (1213), Expect = e-161
 Identities = 250/449 (55%), Positives = 315/449 (70%), Gaps = 12/449 (2%)
 Frame = -1

Query: 1313 MAGLHLRRRTALSSTTFQILR----SSTLLHRSPYSHXXXXXXA----EEREHTNGDDTF 1158
            MA L    R   SS  F   +    S ++LHRS +S            EE+    G    
Sbjct: 1    MAALRRLERGCHSSPLFSRAQVEEISGSILHRSSFSSTVLSSLVGGNGEEKRREKG---- 56

Query: 1157 QKWVTLPPFAPHMDAPSIGKEIAGRKTMGKGEPVTALKWVRRCCPHLPASLVQKLFRLRQ 978
             KW+TLPPF       S+GKE+AG K  G+ E  TALKWV +C PHLP SLVQKLFRLRQ
Sbjct: 57   -KWLTLPPFVSQKGPSSVGKELAGGKLAGQEEITTALKWVHQCFPHLPMSLVQKLFRLRQ 115

Query: 977  VRKELVDSAGDCAEAEAKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDCSTDETEV 798
            VRKELV S      A+ +  + KRVSAK+TL SG++ILLPI+V+    E  +   ++ E+
Sbjct: 116  VRKELVSSG-----AQYEGQQLKRVSAKETLSSGEVILLPISVENFTKENNENPYNQKEI 170

Query: 797  GFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRE 618
             F+RSL+LYKD AIIVINKP G+PVQGG+GI++S+DVL A SLK+D  E P+LVHRLDR+
Sbjct: 171  KFMRSLILYKDSAIIVINKPHGLPVQGGLGIRNSIDVLAATSLKFDSQESPKLVHRLDRD 230

Query: 617  SSGILVMGRTQTSASILHTIFREKTSGVGVNDIESIQRALQKKYWALVIGTPRLSKGRIP 438
             SG+L++GRTQ S SILH+IFREKTS     +I+ + R LQ+KYWALV+GTP+ S G + 
Sbjct: 231  CSGLLILGRTQISTSILHSIFREKTSRTLKENIKDVPRLLQRKYWALVVGTPKHSSGLLS 290

Query: 437  APLAKIVLEDGKSDRITIARDESTPSQHALTEYKVIRSAHGYTWLELRPLTGRKHQLRVH 258
            AP+ K++LEDGKS+RIT+ ++    SQHALTEYKVI++++GYTWLEL PLTGRKHQLRVH
Sbjct: 291  APVGKVILEDGKSERITVIKERPASSQHALTEYKVIKTSNGYTWLELCPLTGRKHQLRVH 350

Query: 257  CAEALGTPIVGDYKYGWKAHRN----LEPMPCVQPKVEHHELPFGLESGGGSISDKQPRL 90
            CAE L TPIVGDYKYGW AH+     +E      PK +H   PFGL+   GSIS+KQPRL
Sbjct: 351  CAEVLKTPIVGDYKYGWHAHKKWELIVEARTSKLPKEKH---PFGLDFESGSISEKQPRL 407

Query: 89   HLHCREMILPNIATALQQLEPSSSSNLDL 3
            HLHC ++ILPNIA A + LEPSS++ L+L
Sbjct: 408  HLHCHQLILPNIAEAGRHLEPSSATKLNL 436


>ref|XP_020592023.1| RNA pseudouridine synthase 4, mitochondrial isoform X4 [Phalaenopsis
            equestris]
          Length = 456

 Score =  471 bits (1213), Expect = e-161
 Identities = 250/449 (55%), Positives = 315/449 (70%), Gaps = 12/449 (2%)
 Frame = -1

Query: 1313 MAGLHLRRRTALSSTTFQILR----SSTLLHRSPYSHXXXXXXA----EEREHTNGDDTF 1158
            MA L    R   SS  F   +    S ++LHRS +S            EE+    G    
Sbjct: 1    MAALRRLERGCHSSPLFSRAQVEEISGSILHRSSFSSTVLSSLVGGNGEEKRREKG---- 56

Query: 1157 QKWVTLPPFAPHMDAPSIGKEIAGRKTMGKGEPVTALKWVRRCCPHLPASLVQKLFRLRQ 978
             KW+TLPPF       S+GKE+AG K  G+ E  TALKWV +C PHLP SLVQKLFRLRQ
Sbjct: 57   -KWLTLPPFVSQKGPSSVGKELAGGKLAGQEEITTALKWVHQCFPHLPMSLVQKLFRLRQ 115

Query: 977  VRKELVDSAGDCAEAEAKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDCSTDETEV 798
            VRKELV S      A+ +  + KRVSAK+TL SG++ILLPI+V+    E  +   ++ E+
Sbjct: 116  VRKELVSSG-----AQYEGQQLKRVSAKETLSSGEVILLPISVENFTKENNENPYNQKEI 170

Query: 797  GFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRE 618
             F+RSL+LYKD AIIVINKP G+PVQGG+GI++S+DVL A SLK+D  E P+LVHRLDR+
Sbjct: 171  KFMRSLILYKDSAIIVINKPHGLPVQGGLGIRNSIDVLAATSLKFDSQESPKLVHRLDRD 230

Query: 617  SSGILVMGRTQTSASILHTIFREKTSGVGVNDIESIQRALQKKYWALVIGTPRLSKGRIP 438
             SG+L++GRTQ S SILH+IFREKTS     +I+ + R LQ+KYWALV+GTP+ S G + 
Sbjct: 231  CSGLLILGRTQISTSILHSIFREKTSRTLKENIKDVPRLLQRKYWALVVGTPKHSSGLLS 290

Query: 437  APLAKIVLEDGKSDRITIARDESTPSQHALTEYKVIRSAHGYTWLELRPLTGRKHQLRVH 258
            AP+ K++LEDGKS+RIT+ ++    SQHALTEYKVI++++GYTWLEL PLTGRKHQLRVH
Sbjct: 291  APVGKVILEDGKSERITVIKERPASSQHALTEYKVIKTSNGYTWLELCPLTGRKHQLRVH 350

Query: 257  CAEALGTPIVGDYKYGWKAHRN----LEPMPCVQPKVEHHELPFGLESGGGSISDKQPRL 90
            CAE L TPIVGDYKYGW AH+     +E      PK +H   PFGL+   GSIS+KQPRL
Sbjct: 351  CAEVLKTPIVGDYKYGWHAHKKWELIVEARTSKLPKEKH---PFGLDFESGSISEKQPRL 407

Query: 89   HLHCREMILPNIATALQQLEPSSSSNLDL 3
            HLHC ++ILPNIA A + LEPSS++ L+L
Sbjct: 408  HLHCHQLILPNIAEAGRHLEPSSATKLNL 436


>ref|XP_020592022.1| RNA pseudouridine synthase 4, mitochondrial isoform X3 [Phalaenopsis
            equestris]
          Length = 460

 Score =  471 bits (1213), Expect = e-161
 Identities = 250/449 (55%), Positives = 315/449 (70%), Gaps = 12/449 (2%)
 Frame = -1

Query: 1313 MAGLHLRRRTALSSTTFQILR----SSTLLHRSPYSHXXXXXXA----EEREHTNGDDTF 1158
            MA L    R   SS  F   +    S ++LHRS +S            EE+    G    
Sbjct: 1    MAALRRLERGCHSSPLFSRAQVEEISGSILHRSSFSSTVLSSLVGGNGEEKRREKG---- 56

Query: 1157 QKWVTLPPFAPHMDAPSIGKEIAGRKTMGKGEPVTALKWVRRCCPHLPASLVQKLFRLRQ 978
             KW+TLPPF       S+GKE+AG K  G+ E  TALKWV +C PHLP SLVQKLFRLRQ
Sbjct: 57   -KWLTLPPFVSQKGPSSVGKELAGGKLAGQEEITTALKWVHQCFPHLPMSLVQKLFRLRQ 115

Query: 977  VRKELVDSAGDCAEAEAKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDCSTDETEV 798
            VRKELV S      A+ +  + KRVSAK+TL SG++ILLPI+V+    E  +   ++ E+
Sbjct: 116  VRKELVSSG-----AQYEGQQLKRVSAKETLSSGEVILLPISVENFTKENNENPYNQKEI 170

Query: 797  GFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRE 618
             F+RSL+LYKD AIIVINKP G+PVQGG+GI++S+DVL A SLK+D  E P+LVHRLDR+
Sbjct: 171  KFMRSLILYKDSAIIVINKPHGLPVQGGLGIRNSIDVLAATSLKFDSQESPKLVHRLDRD 230

Query: 617  SSGILVMGRTQTSASILHTIFREKTSGVGVNDIESIQRALQKKYWALVIGTPRLSKGRIP 438
             SG+L++GRTQ S SILH+IFREKTS     +I+ + R LQ+KYWALV+GTP+ S G + 
Sbjct: 231  CSGLLILGRTQISTSILHSIFREKTSRTLKENIKDVPRLLQRKYWALVVGTPKHSSGLLS 290

Query: 437  APLAKIVLEDGKSDRITIARDESTPSQHALTEYKVIRSAHGYTWLELRPLTGRKHQLRVH 258
            AP+ K++LEDGKS+RIT+ ++    SQHALTEYKVI++++GYTWLEL PLTGRKHQLRVH
Sbjct: 291  APVGKVILEDGKSERITVIKERPASSQHALTEYKVIKTSNGYTWLELCPLTGRKHQLRVH 350

Query: 257  CAEALGTPIVGDYKYGWKAHRN----LEPMPCVQPKVEHHELPFGLESGGGSISDKQPRL 90
            CAE L TPIVGDYKYGW AH+     +E      PK +H   PFGL+   GSIS+KQPRL
Sbjct: 351  CAEVLKTPIVGDYKYGWHAHKKWELIVEARTSKLPKEKH---PFGLDFESGSISEKQPRL 407

Query: 89   HLHCREMILPNIATALQQLEPSSSSNLDL 3
            HLHC ++ILPNIA A + LEPSS++ L+L
Sbjct: 408  HLHCHQLILPNIAEAGRHLEPSSATKLNL 436


>ref|XP_020592021.1| RNA pseudouridine synthase 4, mitochondrial isoform X2 [Phalaenopsis
            equestris]
          Length = 461

 Score =  471 bits (1213), Expect = e-161
 Identities = 250/449 (55%), Positives = 315/449 (70%), Gaps = 12/449 (2%)
 Frame = -1

Query: 1313 MAGLHLRRRTALSSTTFQILR----SSTLLHRSPYSHXXXXXXA----EEREHTNGDDTF 1158
            MA L    R   SS  F   +    S ++LHRS +S            EE+    G    
Sbjct: 1    MAALRRLERGCHSSPLFSRAQVEEISGSILHRSSFSSTVLSSLVGGNGEEKRREKG---- 56

Query: 1157 QKWVTLPPFAPHMDAPSIGKEIAGRKTMGKGEPVTALKWVRRCCPHLPASLVQKLFRLRQ 978
             KW+TLPPF       S+GKE+AG K  G+ E  TALKWV +C PHLP SLVQKLFRLRQ
Sbjct: 57   -KWLTLPPFVSQKGPSSVGKELAGGKLAGQEEITTALKWVHQCFPHLPMSLVQKLFRLRQ 115

Query: 977  VRKELVDSAGDCAEAEAKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDCSTDETEV 798
            VRKELV S      A+ +  + KRVSAK+TL SG++ILLPI+V+    E  +   ++ E+
Sbjct: 116  VRKELVSSG-----AQYEGQQLKRVSAKETLSSGEVILLPISVENFTKENNENPYNQKEI 170

Query: 797  GFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRE 618
             F+RSL+LYKD AIIVINKP G+PVQGG+GI++S+DVL A SLK+D  E P+LVHRLDR+
Sbjct: 171  KFMRSLILYKDSAIIVINKPHGLPVQGGLGIRNSIDVLAATSLKFDSQESPKLVHRLDRD 230

Query: 617  SSGILVMGRTQTSASILHTIFREKTSGVGVNDIESIQRALQKKYWALVIGTPRLSKGRIP 438
             SG+L++GRTQ S SILH+IFREKTS     +I+ + R LQ+KYWALV+GTP+ S G + 
Sbjct: 231  CSGLLILGRTQISTSILHSIFREKTSRTLKENIKDVPRLLQRKYWALVVGTPKHSSGLLS 290

Query: 437  APLAKIVLEDGKSDRITIARDESTPSQHALTEYKVIRSAHGYTWLELRPLTGRKHQLRVH 258
            AP+ K++LEDGKS+RIT+ ++    SQHALTEYKVI++++GYTWLEL PLTGRKHQLRVH
Sbjct: 291  APVGKVILEDGKSERITVIKERPASSQHALTEYKVIKTSNGYTWLELCPLTGRKHQLRVH 350

Query: 257  CAEALGTPIVGDYKYGWKAHRN----LEPMPCVQPKVEHHELPFGLESGGGSISDKQPRL 90
            CAE L TPIVGDYKYGW AH+     +E      PK +H   PFGL+   GSIS+KQPRL
Sbjct: 351  CAEVLKTPIVGDYKYGWHAHKKWELIVEARTSKLPKEKH---PFGLDFESGSISEKQPRL 407

Query: 89   HLHCREMILPNIATALQQLEPSSSSNLDL 3
            HLHC ++ILPNIA A + LEPSS++ L+L
Sbjct: 408  HLHCHQLILPNIAEAGRHLEPSSATKLNL 436


>ref|XP_020592020.1| RNA pseudouridine synthase 4, mitochondrial isoform X1 [Phalaenopsis
            equestris]
          Length = 464

 Score =  471 bits (1213), Expect = e-161
 Identities = 250/449 (55%), Positives = 315/449 (70%), Gaps = 12/449 (2%)
 Frame = -1

Query: 1313 MAGLHLRRRTALSSTTFQILR----SSTLLHRSPYSHXXXXXXA----EEREHTNGDDTF 1158
            MA L    R   SS  F   +    S ++LHRS +S            EE+    G    
Sbjct: 1    MAALRRLERGCHSSPLFSRAQVEEISGSILHRSSFSSTVLSSLVGGNGEEKRREKG---- 56

Query: 1157 QKWVTLPPFAPHMDAPSIGKEIAGRKTMGKGEPVTALKWVRRCCPHLPASLVQKLFRLRQ 978
             KW+TLPPF       S+GKE+AG K  G+ E  TALKWV +C PHLP SLVQKLFRLRQ
Sbjct: 57   -KWLTLPPFVSQKGPSSVGKELAGGKLAGQEEITTALKWVHQCFPHLPMSLVQKLFRLRQ 115

Query: 977  VRKELVDSAGDCAEAEAKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDCSTDETEV 798
            VRKELV S      A+ +  + KRVSAK+TL SG++ILLPI+V+    E  +   ++ E+
Sbjct: 116  VRKELVSSG-----AQYEGQQLKRVSAKETLSSGEVILLPISVENFTKENNENPYNQKEI 170

Query: 797  GFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRE 618
             F+RSL+LYKD AIIVINKP G+PVQGG+GI++S+DVL A SLK+D  E P+LVHRLDR+
Sbjct: 171  KFMRSLILYKDSAIIVINKPHGLPVQGGLGIRNSIDVLAATSLKFDSQESPKLVHRLDRD 230

Query: 617  SSGILVMGRTQTSASILHTIFREKTSGVGVNDIESIQRALQKKYWALVIGTPRLSKGRIP 438
             SG+L++GRTQ S SILH+IFREKTS     +I+ + R LQ+KYWALV+GTP+ S G + 
Sbjct: 231  CSGLLILGRTQISTSILHSIFREKTSRTLKENIKDVPRLLQRKYWALVVGTPKHSSGLLS 290

Query: 437  APLAKIVLEDGKSDRITIARDESTPSQHALTEYKVIRSAHGYTWLELRPLTGRKHQLRVH 258
            AP+ K++LEDGKS+RIT+ ++    SQHALTEYKVI++++GYTWLEL PLTGRKHQLRVH
Sbjct: 291  APVGKVILEDGKSERITVIKERPASSQHALTEYKVIKTSNGYTWLELCPLTGRKHQLRVH 350

Query: 257  CAEALGTPIVGDYKYGWKAHRN----LEPMPCVQPKVEHHELPFGLESGGGSISDKQPRL 90
            CAE L TPIVGDYKYGW AH+     +E      PK +H   PFGL+   GSIS+KQPRL
Sbjct: 351  CAEVLKTPIVGDYKYGWHAHKKWELIVEARTSKLPKEKH---PFGLDFESGSISEKQPRL 407

Query: 89   HLHCREMILPNIATALQQLEPSSSSNLDL 3
            HLHC ++ILPNIA A + LEPSS++ L+L
Sbjct: 408  HLHCHQLILPNIAEAGRHLEPSSATKLNL 436


>gb|PKA54095.1| RNA pseudouridine synthase 4, mitochondrial [Apostasia shenzhenica]
          Length = 467

 Score =  461 bits (1187), Expect = e-157
 Identities = 242/419 (57%), Positives = 300/419 (71%), Gaps = 9/419 (2%)
 Frame = -1

Query: 1250 SSTLLHRSPY----SHXXXXXXAEEREHTNGDDTFQKWVTLPPFAPHMDAPSIGKEIAGR 1083
            S T+L  SP+    S        EE     G     KW+TLP FAP  DA S+ K +AG 
Sbjct: 27   SRTILQSSPFCSVASSSPSGEDGEEVRRMEGS----KWLTLPVFAPRKDASSVAKGLAGG 82

Query: 1082 KTMGKGEPVTALKWVRRCCPHLPASLVQKLFRLRQVRKELVDSAGDCAEAEAKQNKPKRV 903
              + KGEP TALKWVRRCCPHLP SLVQKLFRLRQVRK +  S    +E + +Q + KRV
Sbjct: 83   NPLAKGEPTTALKWVRRCCPHLPISLVQKLFRLRQVRKAV--SITTTSEEQPEQQQLKRV 140

Query: 902  SAKDTLVSGDIILLPITVQKLVTETKDCSTDET-EVGFIRSLVLYKDPAIIVINKPPGMP 726
            SAK+ + SG++ILLP TVQ   TE          ++    SL+LYKD AIIVINKP G+P
Sbjct: 141  SAKEAMSSGEVILLPNTVQNFTTENNYIPKHHHYDIKLFLSLILYKDSAIIVINKPYGLP 200

Query: 725  VQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRESSGILVMGRTQTSASILHTIFREK 546
            VQGGVG+KH +DVL A  +K+D+ E PRLVHRLDR+SSG+L++GRTQ S+SILH++FREK
Sbjct: 201  VQGGVGVKHCVDVLAATLMKFDFPEAPRLVHRLDRDSSGLLILGRTQVSSSILHSVFREK 260

Query: 545  TSGVGVNDIESIQRALQKKYWALVIGTPRLSKGRIPAPLAKIVLEDGKSDRITIARDES- 369
            T G     +++  R LQ+KYWALVIG+P+ S G I AP+ K++LEDG+S+RIT+ +DE  
Sbjct: 261  TCGALKMCVKNAPRILQRKYWALVIGSPKQSSGLISAPVGKVILEDGRSERITVIKDEKP 320

Query: 368  TPSQHALTEYKVIR-SAHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWKAHRN 192
            T SQH+LTE+KV++ S HGYTWLEL PLTGRKHQLRVHCAE L TPIVGDYKYG+ AHR 
Sbjct: 321  TSSQHSLTEFKVMKISEHGYTWLELCPLTGRKHQLRVHCAEVLRTPIVGDYKYGYNAHRK 380

Query: 191  LEPMPCVQ--PKVEHHELPFGLESGGGSISDKQPRLHLHCREMILPNIATALQQLEPSS 21
             +P+       K+   +LPFGL+  GGSISD+QPRLHLHCR+MILP+IA A+ Q E SS
Sbjct: 381  WKPIVAENEASKLPKQKLPFGLDFEGGSISDEQPRLHLHCRQMILPDIAAAVNQFESSS 439


>ref|XP_010271251.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
            X1 [Nelumbo nucifera]
          Length = 472

 Score =  460 bits (1184), Expect = e-156
 Identities = 241/398 (60%), Positives = 298/398 (74%), Gaps = 14/398 (3%)
 Frame = -1

Query: 1154 KWVTLPPFAPHMDAPSIGKEIAGRKTMGKGEPV------TALKWVRRCCPHLPASLVQKL 993
            +W+ LPP +  +DA S+ K ++ R +  KGE        TALKWV RCCPHLP SLVQKL
Sbjct: 54   RWLILPPVSSSIDAVSVVKALSSRPSDLKGETTNTTTSTTALKWVLRCCPHLPRSLVQKL 113

Query: 992  FRLRQVRKELVDSAGDCAEAE-AKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDCS 816
            FRLRQVR+E  DS         A++++ KRV+AK+ +  GD I LPITVQ+L +ET++  
Sbjct: 114  FRLRQVRRESCDSMSSLDIGNHAQEHRLKRVTAKEVMNLGDRIFLPITVQELPSETQEHY 173

Query: 815  TDETEVGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLV 636
             +E E+ +I SL LYKDPAII +NKP GMPVQGG+GIK S+D L A  L+YDYSEPPRLV
Sbjct: 174  CNEDEISYICSLELYKDPAIIAVNKPHGMPVQGGIGIKKSLDELAATYLRYDYSEPPRLV 233

Query: 635  HRLDRESSGILVMGRTQTSASILHTIFREKTSGVGVNDIESIQRALQKKYWALVIGTPRL 456
            HRLDR+SSGILVMGRTQTSA+ILH+IFREKT G  +ND + +   LQ++YWALVIGTP+ 
Sbjct: 234  HRLDRDSSGILVMGRTQTSATILHSIFREKTFGASINDNDKM--ILQRRYWALVIGTPKR 291

Query: 455  SKGRIPAPLAKIVLEDGKSDRITI-ARDESTPSQHALTEYKVIR-SAHGYTWLELRPLTG 282
            + G I APL K+VL+DGKS+R+T+     +  SQHA+T+Y+V++ SAHGYTWLEL PLTG
Sbjct: 292  ANGLISAPLGKVVLDDGKSERMTVDTNGNAISSQHAVTKYQVMKSSAHGYTWLELCPLTG 351

Query: 281  RKHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQPK-----VEHHELPFGLESGGG 117
            RKHQLRVHCAE LGTPIVGDYKYGW+AHR  +P+    P+         E PFGL+S GG
Sbjct: 352  RKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWKPLSWSNPQKNKKLPRSKESPFGLDSEGG 411

Query: 116  SISDKQPRLHLHCREMILPNIATALQQLEPSSSSNLDL 3
            SI++KQP LHLHCR+MI PNIA ALQ L+  SSSN DL
Sbjct: 412  SIAEKQPHLHLHCRQMIFPNIALALQHLQ--SSSNCDL 447


>ref|XP_018827853.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
            [Juglans regia]
          Length = 476

 Score =  460 bits (1183), Expect = e-156
 Identities = 238/415 (57%), Positives = 302/415 (72%), Gaps = 20/415 (4%)
 Frame = -1

Query: 1193 EEREHTNGDDTFQKWVTLPPFAPHMDAPSIGKEIAGRKTMGKG----------EPVTALK 1044
            + +E  N D    KW TLPPF P ++  + GKEI+  +   K              TALK
Sbjct: 44   DTKEGNNSD----KWFTLPPFTPTVNGAAFGKEISRNRAPLKSGVTTSATSTSTTTTALK 99

Query: 1043 WVRRCCPHLPASLVQKLFRLRQVRKELVDSAGDCAEAEAKQNKP-KRVSAKDTLVSGDII 867
            WV RCCP LP SLVQKLFRLRQVR+E  D    C +A+ +Q +  KRVSAKD++  GD I
Sbjct: 100  WVLRCCPDLPRSLVQKLFRLRQVRRESNDVGSTCVDAQVQQERRLKRVSAKDSMNVGDRI 159

Query: 866  LLPITVQKLVTETKDCSTDETEVGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDV 687
             LPITVQ+   E +DC  +E E  F+RSLVLYKDPAI+V+NKPPGMPVQGG+GIK S+D 
Sbjct: 160  FLPITVQEFPFEKQDCHCNEEEANFVRSLVLYKDPAIVVVNKPPGMPVQGGIGIKQSLDG 219

Query: 686  LGAMSLKYDYSEPPRLVHRLDRESSGILVMGRTQTSASILHTIFREKTSGVGVNDIESIQ 507
            L A  L Y+YSE PRLVHRLDR+SSGILVMGRTQTSA++LH+IFREKT G   +D+++  
Sbjct: 220  LAATCLTYNYSETPRLVHRLDRDSSGILVMGRTQTSAAVLHSIFREKTFG-AKDDVDNEV 278

Query: 506  RALQKKYWALVIGTPRLSKGRIPAPLAKIVLEDGKSDRITIARD-ESTPSQHALTEYKVI 330
            R L+++YWALVIG+PR  KG I  PL K+V+++GKSDRITI  + ++  +QHALT+Y+VI
Sbjct: 279  RILERRYWALVIGSPRRQKGLISVPLGKVVVDNGKSDRITIVDNAQNMSAQHALTKYQVI 338

Query: 329  RSA-HGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQPKVEH 153
            +S+ +GYTWLEL PLTGRKHQLRVHCAE LGTPIVGD KYGW+AH+ L+ +P    + E 
Sbjct: 339  KSSCYGYTWLELSPLTGRKHQLRVHCAEVLGTPIVGDLKYGWQAHKKLKHLPWPSLERES 398

Query: 152  HE-------LPFGLESGGGSISDKQPRLHLHCREMILPNIATALQQLEPSSSSNL 9
            HE       +PFGL+   GSIS+K PRLHLHC++M+LPN++ ALQ ++ SS  +L
Sbjct: 399  HENVTKGKTIPFGLDLQSGSISEKHPRLHLHCKQMVLPNVSMALQNVQFSSDYHL 453


>ref|XP_015892750.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Ziziphus
            jujuba]
          Length = 486

 Score =  459 bits (1180), Expect = e-155
 Identities = 246/461 (53%), Positives = 305/461 (66%), Gaps = 26/461 (5%)
 Frame = -1

Query: 1313 MAGLHLRRRTALSSTTFQILRSSTLLHRSPY----SHXXXXXXAEEREHTN-GDDTFQKW 1149
            MA   L RR  L S     +     L  SP+    SH          +  N GD+   KW
Sbjct: 1    MANPKLLRRILLRSPLNDTVLDGARLFFSPFHEWRSHYSSIAPETLTQEENPGDNNSNKW 60

Query: 1148 VTLPPFAPHMDAPSIGKEIAGRKTMGKGEPV--------------TALKWVRRCCPHLPA 1011
             TLPP+   +D   +GKEIA  +   K +                TALKWV RCCP LP 
Sbjct: 61   FTLPPYTSTVDGGILGKEIARNRLENKNDAAIGRGAANPPYSSSTTALKWVVRCCPELPR 120

Query: 1010 SLVQKLFRLRQVRKELVDSAGDCAEAEAKQNKPKRVSAKDTLVSGDIILLPITVQKLVTE 831
            SLVQKLFRLRQVR+E  D        E ++ + +RV    +   GD I LPI+VQ+   +
Sbjct: 121  SLVQKLFRLRQVRRESCDIGHSEMGDELQKPRLRRVITVFSYNLGDRIYLPISVQEFPVD 180

Query: 830  TKDCSTDETEVGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSE 651
             K+   +E EV FIRSL LYKDPAIIV+NKPPGMPVQGG+GIK S+D L A  L YD  E
Sbjct: 181  KKEYHCNEEEVSFIRSLELYKDPAIIVVNKPPGMPVQGGIGIKRSLDELAATCLSYDCLE 240

Query: 650  PPRLVHRLDRESSGILVMGRTQTSASILHTIFREKTSGVGVNDIESIQRALQKKYWALVI 471
            PPRLVHRLDR+SSGILVMGRTQTSA++LHTIFREKT G   ++I++++R LQ++YWALVI
Sbjct: 241  PPRLVHRLDRDSSGILVMGRTQTSATVLHTIFREKTFGASHDEIDNVKRILQRRYWALVI 300

Query: 470  GTPRLSKGRIPAPLAKIVLEDGKSDRITIARDEST-PSQHALTEYKVIRSAHGYTWLELR 294
            G+PR  KG I APL K+VL++GKSDRIT+  +  T  SQHA+T+YKVI S+HGYTWLEL 
Sbjct: 301  GSPRHRKGFISAPLRKVVLDNGKSDRITVMHNSQTLASQHAITKYKVIGSSHGYTWLELS 360

Query: 293  PLTGRKHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQPKVEHHE------LPFGL 132
            P+TGRKHQLRVHCAE LGTPI+GDYKYGW+AH+N +P PC   +   +E      LPFGL
Sbjct: 361  PITGRKHQLRVHCAEVLGTPILGDYKYGWQAHKNWKPFPCSNHENNSNEVPKRKILPFGL 420

Query: 131  ESGGGSISDKQPRLHLHCREMILPNIATALQQLEPSSSSNL 9
            +   G ISDK PRLHLHC++M+LP+I+  LQ ++  S  +L
Sbjct: 421  DLDNGDISDKHPRLHLHCKQMVLPDISLVLQNVQLYSDYDL 461


>ref|XP_023924555.1| RNA pseudouridine synthase 4, mitochondrial isoform X1 [Quercus
            suber]
 ref|XP_023924556.1| RNA pseudouridine synthase 4, mitochondrial isoform X2 [Quercus
            suber]
 gb|POE95604.1| rna pseudouridine synthase 4, mitochondrial [Quercus suber]
          Length = 499

 Score =  458 bits (1178), Expect = e-155
 Identities = 242/435 (55%), Positives = 313/435 (71%), Gaps = 8/435 (1%)
 Frame = -1

Query: 1289 RTALSSTTFQILRSSTLLHRSPYSHXXXXXXAEEREHTNGDDTFQKWVTLPPFAPHMDAP 1110
            R+  S+T    LR       + +SH       +E +H N  +   KW TLPPF P ++A 
Sbjct: 42   RSPPSTTAHGGLRLCISAIHALHSHYTTSTTTKEPKHYNNKNN-GKWFTLPPFTPTLNAA 100

Query: 1109 SIGKEIAGRKTMGKGE-PVTALKWVRRCCPHLPASLVQKLFRLRQVRKELVDSAGDCAEA 933
            ++GKE++ R +  K +   TALKWV +CCP LP SLVQKLFRLRQVR+E          A
Sbjct: 101  ALGKELSARSSQSKADVSTTALKWVLKCCPDLPRSLVQKLFRLRQVRRESNTMESTDVGA 160

Query: 932  EAKQNKPKRVSAKDTLVSGDIILLPITV-QKLVTETKDCSTDETEVGFIRSLVLYKDPAI 756
            +  +   KRV+AKD++  GD I LPITV Q++ +E +    +E EV FIRSLVLY+DPAI
Sbjct: 161  QVHERSLKRVAAKDSMNDGDRIFLPITVKQEVPSEKQKLYCNEEEVNFIRSLVLYQDPAI 220

Query: 755  IVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRESSGILVMGRTQTSA 576
            +V+NKPPGM VQGG+GIK S+D L A  L YD SEPPRLVHRLDR+SSGILV+GRTQ SA
Sbjct: 221  VVVNKPPGMAVQGGIGIKTSLDELAATCLSYDLSEPPRLVHRLDRDSSGILVLGRTQISA 280

Query: 575  SILHTIFREKTSGVGVNDIESIQRALQKKYWALVIGTPRLSKGRIPAPLAKIVLEDGKSD 396
            ++LH+IFREKT G   +DI++ +R LQ+KYWALVIG+PR  KG I APL K+V+++GKSD
Sbjct: 281  TVLHSIFREKTCG-AKDDIDNEERILQRKYWALVIGSPRRPKGLISAPLGKVVVDNGKSD 339

Query: 395  RITIARD-ESTPSQHALTEYKVIRSA-HGYTWLELRPLTGRKHQLRVHCAEALGTPIVGD 222
            RITI  + ++  +Q A+TEY+VI+S+ HG+TWLEL PLTGRKHQLRVHCAEALGTPIVGD
Sbjct: 340  RITIIDNLQNMSAQLAITEYQVIKSSCHGFTWLELSPLTGRKHQLRVHCAEALGTPIVGD 399

Query: 221  YKYGWKAHRNLEPMPCVQPKVEH----HELPFGLESGGGSISDKQPRLHLHCREMILPNI 54
             KYGW+AHRNL+ +PC     E+      +PFGL+   GSIS+K P LHLHC++M+LPN+
Sbjct: 400  LKYGWQAHRNLKQLPCSMKSNENPTKGKTVPFGLDLESGSISEKHPHLHLHCKQMVLPNV 459

Query: 53   ATALQQLEPSSSSNL 9
            + ALQ ++ SS  +L
Sbjct: 460  SEALQNVQFSSDYDL 474


>ref|XP_002282614.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
            [Vitis vinifera]
 emb|CBI40257.3| unnamed protein product, partial [Vitis vinifera]
          Length = 476

 Score =  454 bits (1169), Expect = e-154
 Identities = 232/399 (58%), Positives = 294/399 (73%), Gaps = 17/399 (4%)
 Frame = -1

Query: 1154 KWVTLPPFAPHMDAPSIGKEIAGRKT------MGKGEPVTALKWVRRCCPHLPASLVQKL 993
            KW TLP F P +DA S+GK ++G +T         G   TALKWV RCCP LP SLVQKL
Sbjct: 55   KWFTLPAFTPVVDASSLGKVLSGHRTDLNTGNTTAGASTTALKWVVRCCPQLPRSLVQKL 114

Query: 992  FRLRQVRKELVDSAGDCAEAEAKQNKPKRVSAKDTLVSGDIILLPITVQKLVTETKDCST 813
            FRLRQVR+E  +        + ++++ KRV+AKD +  GD ILLPITV++  +E  +   
Sbjct: 115  FRLRQVRRESYNMITSDIGVQNQEHRLKRVAAKDLMNLGDQILLPITVEEFPSEKHEYHC 174

Query: 812  DETEVGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVH 633
            ++ E+ F+ +L LYKDPAIIV+NKPPG+PVQGG+GIK S+D L A  L+YD SEPPRLVH
Sbjct: 175  NDEEINFVHNLELYKDPAIIVVNKPPGLPVQGGIGIKRSLDELAATYLRYDCSEPPRLVH 234

Query: 632  RLDRESSGILVMGRTQTSASILHTIFREKTSGVGVNDIESIQRALQKKYWALVIGTPRLS 453
            RLDR+SSGIL+MGRTQTSA+ILH+IFREKT G   NDI++ +R LQ++YWALVIG+PR  
Sbjct: 235  RLDRDSSGILIMGRTQTSATILHSIFREKTFGASNNDIDTKKRILQRRYWALVIGSPRRP 294

Query: 452  KGRIPAPLAKIVLEDGKSDRITIARDEST-PSQHALTEYKVIRSA-HGYTWLELRPLTGR 279
            +G I APL K+V++DGKS+RITI  +  T  SQHA+TEY+VI+S+ HGYTWLEL PLTGR
Sbjct: 295  RGLISAPLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTGR 354

Query: 278  KHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMPCVQPKVEHH---------ELPFGLES 126
            KHQLRVHCAE LGTPIVGDYKYGW+AHR  + +   Q  +E +           PFGL+ 
Sbjct: 355  KHQLRVHCAEVLGTPIVGDYKYGWQAHRKWKQL--FQSNIEKNLDENLSNRKTHPFGLDL 412

Query: 125  GGGSISDKQPRLHLHCREMILPNIATALQQLEPSSSSNL 9
              GSI DKQP LHLHC++M+LPN++ ALQ L+ S+  +L
Sbjct: 413  ESGSILDKQPHLHLHCKQMVLPNVSLALQNLQLSAECDL 451


>ref|XP_022749157.1| RNA pseudouridine synthase 4, mitochondrial isoform X1 [Durio
            zibethinus]
          Length = 477

 Score =  454 bits (1168), Expect = e-154
 Identities = 237/419 (56%), Positives = 301/419 (71%), Gaps = 11/419 (2%)
 Frame = -1

Query: 1232 RSPYSHXXXXXXAEEREHTNGDDTFQKWVTLPPFAPHMDAPSIGKEIAGRKTMGKGEPVT 1053
            RS YS           +  N +    KW TLPPFA  ++A  +  ++AG+  + + +  T
Sbjct: 36   RSHYSTTAELSADHPNDEGNSEKKDSKWFTLPPFAKTVNASVLRAKLAGKSHLKEADEST 95

Query: 1052 ALKWVRRCCPHLPASLVQKLFRLRQVRKE--LVDSAGDCAEAEAKQNKPKRVSAKDTLVS 879
            A+KWV +CCP LP SLVQKLFRLRQVR+E  +V+ + D  +++ ++ + KRV AKD+L  
Sbjct: 96   AIKWVLKCCPELPRSLVQKLFRLRQVRRESKIVEVSDD--DSQVQRIQLKRVGAKDSLNI 153

Query: 878  GDIILLPITVQKLVTETKDCSTDETEVGFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKH 699
            GD I LPITV++   E ++    + E+ FIR+L LYKDPAIIV+NKPPGMPVQGG+GIK 
Sbjct: 154  GDRIFLPITVREFPEEKQEHGCTDEELNFIRNLELYKDPAIIVLNKPPGMPVQGGIGIKW 213

Query: 698  SMDVLGAMSLKYDYSEPPRLVHRLDRESSGILVMGRTQTSASILHTIFREKTSGVGVNDI 519
            S+D L A  L YDYSEPPRLVHRLDR+ SGILVMGRTQTSA ILH++FRE+T GV  +D 
Sbjct: 214  SLDELAATWLCYDYSEPPRLVHRLDRDCSGILVMGRTQTSARILHSVFREETIGVSEHDF 273

Query: 518  ESIQRALQKKYWALVIGTPRLSKGRIPAPLAKIVLEDGKSDRITI-ARDESTPSQHALTE 342
            ++ +R LQKKYWALVIG+PR  KG I APL K+V++DGKSDRIT+    +   SQHA+TE
Sbjct: 274  DNEKRILQKKYWALVIGSPRRPKGTISAPLRKVVVDDGKSDRITVFDNTKIMSSQHAITE 333

Query: 341  YKVIR-SAHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMP---- 177
            Y VI+ S+HGYTWLEL PLTGRKHQLRVHCAE LGTPIVGDYKYGW+AHR  + +P    
Sbjct: 334  YSVIKTSSHGYTWLELSPLTGRKHQLRVHCAEILGTPIVGDYKYGWQAHRRWQNLPESDL 393

Query: 176  ---CVQPKVEHHELPFGLESGGGSISDKQPRLHLHCREMILPNIATALQQLEPSSSSNL 9
                 +   + + LPFGL    GSI +K+ RLHLHCREMILPN++ ALQ L+ S+  +L
Sbjct: 394  GKNSNEKFSKENSLPFGLNMNSGSILEKRLRLHLHCREMILPNVSQALQYLQSSTDHDL 452


>ref|XP_007199810.1| RNA pseudouridine synthase 4, mitochondrial [Prunus persica]
 gb|ONH91758.1| hypothetical protein PRUPE_8G135400 [Prunus persica]
          Length = 483

 Score =  454 bits (1168), Expect = e-154
 Identities = 238/422 (56%), Positives = 293/422 (69%), Gaps = 28/422 (6%)
 Frame = -1

Query: 1190 EREHTNGDDTFQKWVTLPPFAPHMDAPSIGKEIAGRKTMGK------------GEPVTAL 1047
            E  H + +   +KW TLPPF   ++  ++GKE++  ++ G+                TAL
Sbjct: 37   ETFHEDREKRGEKWFTLPPFTATINGSALGKELSRNRSYGRDVITKTATASTTSTTTTAL 96

Query: 1046 KWVRRCCPHLPASLVQKLFRLRQVRKELVDSAGDCAEAEAKQNKPKRVSAKDTLVSGDII 867
            KWV RCCP LP SLVQKLFRLRQVR+E  D        EA +   KRV+AKD++  GD I
Sbjct: 97   KWVTRCCPELPRSLVQKLFRLRQVRRESCDMECSGEGVEALERPLKRVAAKDSMNVGDRI 156

Query: 866  LLPITVQK-------LVTETKDCSTDETEVGFIRSLVLYKDPAIIVINKPPGMPVQGGVG 708
             LP++VQ+       L  + K+C   E EV FIRSL LYKDPAIIVINKPPGMPVQGG+G
Sbjct: 157  HLPLSVQEFPNDKQELPNDKKECYCSEEEVTFIRSLELYKDPAIIVINKPPGMPVQGGIG 216

Query: 707  IKHSMDVLGAMSLKYDYSEPPRLVHRLDRESSGILVMGRTQTSASILHTIFREKTSGVGV 528
            IK S+D L A  L YD+SEPPRLVHRLDR+SSGILVMGRTQTSA++LH+IFREKT G   
Sbjct: 217  IKRSLDELAAACLSYDFSEPPRLVHRLDRDSSGILVMGRTQTSATVLHSIFREKTFGASN 276

Query: 527  NDIESIQRALQKKYWALVIGTPRLSKGRIPAPLAKIVLEDGKSDRITIARDEST-PSQHA 351
            ++I+  +R LQ++YWALVIG+PR  KG I APL K+V+++GKSDRITI  D  T PSQHA
Sbjct: 277  DEIDDAKRILQRRYWALVIGSPRQRKGLISAPLGKVVVDNGKSDRITIVNDSQTLPSQHA 336

Query: 350  LTEYKVIRS-AHGYTWLELRPLTGRKHQLRVHCAEALGTPIVGDYKYGWKAHRNLEPMPC 174
            +T+YKVI S   GYTWLEL PLTGRKHQLRVHCAE L TPIVGDYKYGW+ HRN +P+  
Sbjct: 337  ITKYKVIGSPCPGYTWLELTPLTGRKHQLRVHCAEVLRTPIVGDYKYGWQTHRNWKPLAW 396

Query: 173  VQPKVEHHE-------LPFGLESGGGSISDKQPRLHLHCREMILPNIATALQQLEPSSSS 15
               +    E       LPF L    GS+S+K PRLHLHC++M+LPN+  ALQ ++  S S
Sbjct: 397  SNNECHSDEEFPKRKNLPFDLNMESGSVSEKNPRLHLHCKQMVLPNVNLALQNVKLHSDS 456

Query: 14   NL 9
            +L
Sbjct: 457  DL 458


>ref|XP_019225818.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Nicotiana
            attenuata]
 gb|OIT32415.1| rna uridine synthase 4, mitochondrial [Nicotiana attenuata]
          Length = 464

 Score =  453 bits (1166), Expect = e-154
 Identities = 233/392 (59%), Positives = 288/392 (73%), Gaps = 10/392 (2%)
 Frame = -1

Query: 1154 KWVTLPPFAPHMDAPSIGKEIAGRKTMGKGEPVTALKWVRRCCPHLPASLVQKLFRLRQV 975
            KW TLPPF P ++  ++GKE+AG K       +TALKWV+RCCP LP SLVQKLFRLRQV
Sbjct: 57   KWFTLPPFTPTVNGAALGKELAGVKMDKSTNTMTALKWVQRCCPELPQSLVQKLFRLRQV 116

Query: 974  RKELVDSAGDCAEAEAKQNKPKRVSAKDTLVSGDIILLPITVQKLVTE-TKDCSTDETEV 798
            R+E          ++ ++ +PKRV+AK+++  GD I LPITVQK  ++   D  + E E+
Sbjct: 117  RRE---------SSDVEEQRPKRVAAKESMNIGDRIFLPITVQKFPSDKVTDYPSSEEEM 167

Query: 797  GFIRSLVLYKDPAIIVINKPPGMPVQGGVGIKHSMDVLGAMSLKYDYSEPPRLVHRLDRE 618
             F+ SL LYKDP IIV+NKPPG+PVQGG+GIK S+D L A  +KY+YSE PRLVHRLDR+
Sbjct: 168  KFLHSLELYKDPEIIVLNKPPGLPVQGGIGIKRSLDELAAKYMKYEYSEAPRLVHRLDRD 227

Query: 617  SSGILVMGRTQTSASILHTIFREKTSGVGVNDIESIQRALQKKYWALVIGTPRLSKGRIP 438
             SGILVMGRTQ SAS+LH++FREKT G    D+ES +R LQK+YWALVIG PR SKG I 
Sbjct: 228  CSGILVMGRTQLSASVLHSVFREKTFGTQTEDLESKKRVLQKRYWALVIGCPRRSKGLIS 287

Query: 437  APLAKIVLEDGKSDRITIARDESTPS-QHALTEYKVIRSAH-GYTWLELRPLTGRKHQLR 264
             PL K+VL++GKS+RITI  D   PS Q A+TEY++I S+  GYTWLEL PLTGRKHQLR
Sbjct: 288  VPLGKVVLDNGKSERITIMSDVREPSAQFAVTEYRIIGSSEKGYTWLELSPLTGRKHQLR 347

Query: 263  VHCAEALGTPIVGDYKYGWKAHRNLEPMPC------VQPKVEHHEL-PFGLESGGGSISD 105
            VHCAE LGTPIVGDYKYGW+AHR L+ +        +  ++   E+ PF L  G GSISD
Sbjct: 348  VHCAEVLGTPIVGDYKYGWQAHRKLKHLSSSTSIVNLGARIPEQEVDPFSLRLGNGSISD 407

Query: 104  KQPRLHLHCREMILPNIATALQQLEPSSSSNL 9
            KQP LHLHC+EM+LPNI+ ALQQ    S ++L
Sbjct: 408  KQPHLHLHCKEMVLPNISLALQQARVVSDADL 439