BLASTX nr result
ID: Ophiopogon22_contig00024969
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00024969
(452 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 70 6e-11
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 68 3e-10
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 68 3e-10
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 68 3e-10
emb|CCI55401.1| PH01B015M02.2 [Phyllostachys edulis] 67 4e-10
ref|XP_020963654.1| uncharacterized protein LOC107607928 [Arachi... 67 5e-10
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 67 7e-10
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 67 7e-10
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 66 1e-09
ref|XP_020271762.1| uncharacterized protein LOC109846933 [Aspara... 64 2e-09
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo... 65 3e-09
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc... 64 5e-09
gb|ASR75372.1| retrotransposon protein [Oryza nivara] 64 5e-09
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 64 5e-09
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 64 6e-09
gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposo... 64 6e-09
gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposo... 64 6e-09
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 64 6e-09
gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposo... 64 6e-09
gb|ABA99467.1| retrotransposon protein, putative, Ty1-copia subc... 64 9e-09
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 69.7 bits (169), Expect = 6e-11
Identities = 32/77 (41%), Positives = 46/77 (59%)
Frame = -2
Query: 451 STTVDLHISDEIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNE 272
STT+DL E+W+ V+YS L +FGC Y + ++ K++ KS+KCIF+ + V
Sbjct: 626 STTIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKG 685
Query: 271 YRLWNSETRNAFVSRVV 221
YRLW+ R VSR V
Sbjct: 686 YRLWDPTARKVVVSRDV 702
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 67.8 bits (164), Expect = 3e-10
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = -2
Query: 451 STTVDLHISDEIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNE 272
ST +DL E+W+ V+YS L +FGC Y + ++ K++ KS+KCIF+ + V
Sbjct: 626 STAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKG 685
Query: 271 YRLWNSETRNAFVSRVV 221
YRLW+ R VSR V
Sbjct: 686 YRLWDPTARKVVVSRDV 702
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 67.8 bits (164), Expect = 3e-10
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = -2
Query: 451 STTVDLHISDEIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNE 272
ST +DL E+W+ V+YS L +FGC Y + ++ K++ KS+KCIF+ + V
Sbjct: 626 STAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQEKTKLDPKSRKCIFLGYADNVKG 685
Query: 271 YRLWNSETRNAFVSRVV 221
YRLW+ R VSR V
Sbjct: 686 YRLWDPTARKVVVSRDV 702
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 67.8 bits (164), Expect = 3e-10
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = -2
Query: 451 STTVDLHISDEIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNE 272
ST +DL E+W+ V+YS L +FGC Y + ++ K++ KS+KCIF+ + V
Sbjct: 626 STAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKG 685
Query: 271 YRLWNSETRNAFVSRVV 221
YRLW+ R VSR V
Sbjct: 686 YRLWDPTARKVVVSRDV 702
>emb|CCI55401.1| PH01B015M02.2 [Phyllostachys edulis]
Length = 1655
Score = 67.4 bits (163), Expect = 4e-10
Identities = 31/67 (46%), Positives = 42/67 (62%)
Frame = -2
Query: 421 EIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNEYRLWNSETRN 242
EIW NYS+LR+F C+AY+ V K+E K+ KCIF+ +K GV Y+LWN ET
Sbjct: 1258 EIWSSSLANYSELRVFSCTAYAHV---DNEKLEPKAVKCIFLGYKSGVKGYKLWNPETNK 1314
Query: 241 AFVSRVV 221
+SR +
Sbjct: 1315 VVISRSI 1321
>ref|XP_020963654.1| uncharacterized protein LOC107607928 [Arachis ipaensis]
Length = 1235
Score = 67.0 bits (162), Expect = 5e-10
Identities = 32/77 (41%), Positives = 44/77 (57%)
Frame = -2
Query: 451 STTVDLHISDEIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNE 272
ST + L E+W+ NYS L IFGC Y + ++ K++ KS+KCIF+ + GV
Sbjct: 326 STAIGLKTPMEMWQGKPPNYSSLHIFGCPVYVMYNSQERTKLDPKSRKCIFLGYADGVKG 385
Query: 271 YRLWNSETRNAFVSRVV 221
YRLW+ R VSR V
Sbjct: 386 YRLWDPTARKVVVSRDV 402
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAT44170.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1175
Score = 66.6 bits (161), Expect = 7e-10
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = -2
Query: 421 EIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNEYRLWNSETRN 242
E+W NYSQLR+FGC+AY+ V K+E ++ KC+F+ + GV Y+LWN ET
Sbjct: 535 EVWSGMPANYSQLRVFGCTAYAHV---NNGKLEPRAIKCLFLGYGSGVKGYKLWNPETNK 591
Query: 241 AFVSRVV 221
F+SR V
Sbjct: 592 TFMSRSV 598
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 66.6 bits (161), Expect = 7e-10
Identities = 30/77 (38%), Positives = 47/77 (61%)
Frame = -2
Query: 451 STTVDLHISDEIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNE 272
S ++ ++E+W V+YS LR+FGCSAY+ + + K+E KS +C+FI F+ GV
Sbjct: 598 SRAINFKCAEEVWSGKPVDYSNLRVFGCSAYAHIPKDERTKLEPKSLECLFIGFEKGVKG 657
Query: 271 YRLWNSETRNAFVSRVV 221
Y+LW+ +SR V
Sbjct: 658 YKLWDIVNEKKVISRDV 674
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gb|AAL75759.1| Putative pol polyprotein [Oryza sativa Japonica Group]
gb|AAP51772.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1005
Score = 66.2 bits (160), Expect = 1e-09
Identities = 31/67 (46%), Positives = 44/67 (65%)
Frame = -2
Query: 421 EIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNEYRLWNSETRN 242
E+W S +YSQLR+FGC+AY+ V K+E ++ KC+F+ + GV Y+LWN ET
Sbjct: 377 EVWSGMSADYSQLRVFGCTAYAHV---DNGKLEPRAIKCLFLGYGSGVKGYKLWNPETNK 433
Query: 241 AFVSRVV 221
F+SR V
Sbjct: 434 TFMSRSV 440
>ref|XP_020271762.1| uncharacterized protein LOC109846933 [Asparagus officinalis]
Length = 232
Score = 63.9 bits (154), Expect = 2e-09
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = -2
Query: 451 STTVDLHISDEIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNE 272
ST++D +E+W NYS LR+FGCSAY V K+E + KK IF+ + GV
Sbjct: 96 STSIDFKAPEEVWSGAPANYSHLRVFGCSAYFYV---NDGKLEPRKKKAIFLGYATGVKR 152
Query: 271 YRLWNSETR 245
YRLW S+ +
Sbjct: 153 YRLWCSDLK 161
>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Capsicum baccatum]
Length = 1526
Score = 65.1 bits (157), Expect = 3e-09
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = -2
Query: 445 TVDLHISDEIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNEYR 266
++D I +E+W ++YS RIFGC AYS V K+E ++KKCIF+ + GV YR
Sbjct: 283 SLDCKILEEVWSGNPIDYSNFRIFGCPAYSHV---NEGKLEPRAKKCIFLGYGLGVKGYR 339
Query: 265 LWNSETRNAFVSRVV 221
L++ E+R F SR V
Sbjct: 340 LYDPESRKIFHSRNV 354
>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1131
Score = 64.3 bits (155), Expect = 5e-09
Identities = 30/67 (44%), Positives = 43/67 (64%)
Frame = -2
Query: 421 EIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNEYRLWNSETRN 242
E+W +YSQLR+FGC+AY+ V K+E ++ KC+F+ + GV Y+LWN ET
Sbjct: 568 EVWSGMPADYSQLRVFGCTAYAHV---DNGKLEPRAIKCLFLGYGSGVKGYKLWNPETNK 624
Query: 241 AFVSRVV 221
F+SR V
Sbjct: 625 TFMSRSV 631
>gb|ASR75372.1| retrotransposon protein [Oryza nivara]
Length = 1170
Score = 64.3 bits (155), Expect = 5e-09
Identities = 30/67 (44%), Positives = 43/67 (64%)
Frame = -2
Query: 421 EIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNEYRLWNSETRN 242
E+W +YSQLR+FGC+AY+ V K+E ++ KC+F+ + GV Y+LWN ET
Sbjct: 559 EVWSGMPADYSQLRVFGCTAYAHV---DNGKLEPRAIKCLFLGYGSGVKGYKLWNPETNK 615
Query: 241 AFVSRVV 221
F+SR V
Sbjct: 616 TFMSRSV 622
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAU89150.1| integrase core domain containing protein [Oryza sativa Japonica
Group]
gb|ABF98081.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1322
Score = 64.3 bits (155), Expect = 5e-09
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = -2
Query: 421 EIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNEYRLWNSETRN 242
EIW +YSQLR+FGC+AY+ V K+E ++ KC+F+ + GV Y+LWN ET
Sbjct: 640 EIWSGMPADYSQLRVFGCTAYAHV---DNGKLEPRAIKCLFLGYGSGVKGYKLWNPETNK 696
Query: 241 AFVSRVV 221
F+SR V
Sbjct: 697 TFMSRNV 703
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 63.9 bits (154), Expect = 6e-09
Identities = 30/75 (40%), Positives = 45/75 (60%)
Frame = -2
Query: 445 TVDLHISDEIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNEYR 266
T+D E+W NYS LR+FGC+AY+ V K+E ++ KCIF+ + GV +Y+
Sbjct: 518 TIDKKTPIEVWSGSPANYSDLRVFGCTAYAHV---DNGKLEPRAIKCIFLGYPSGVKDYK 574
Query: 265 LWNSETRNAFVSRVV 221
LW +T+ +SR V
Sbjct: 575 LWCPKTKKVVISRNV 589
>gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 63.9 bits (154), Expect = 6e-09
Identities = 30/77 (38%), Positives = 42/77 (54%)
Frame = -2
Query: 451 STTVDLHISDEIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNE 272
ST + L E+W NYS L +FGC Y + ++ K++ KS+KCIF+ + V
Sbjct: 576 STAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKG 635
Query: 271 YRLWNSETRNAFVSRVV 221
YRLW+ R VSR V
Sbjct: 636 YRLWDPTARKVVVSRDV 652
>gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 63.9 bits (154), Expect = 6e-09
Identities = 30/77 (38%), Positives = 42/77 (54%)
Frame = -2
Query: 451 STTVDLHISDEIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNE 272
ST + L E+W NYS L +FGC Y + ++ K++ KS+KCIF+ + V
Sbjct: 576 STAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKG 635
Query: 271 YRLWNSETRNAFVSRVV 221
YRLW+ R VSR V
Sbjct: 636 YRLWDPTARKVVVSRDV 652
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 63.9 bits (154), Expect = 6e-09
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = -2
Query: 421 EIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNEYRLWNSETRN 242
EIW +YSQLR+FGC+AY+ V K+E ++ KC+F+ + GV Y+LWN ET
Sbjct: 640 EIWSGMPADYSQLRVFGCTAYAHV---DNEKLEPRAIKCLFLGYGLGVKGYKLWNPETNK 696
Query: 241 AFVSRVV 221
F+SR V
Sbjct: 697 TFMSRSV 703
>gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 63.9 bits (154), Expect = 6e-09
Identities = 30/77 (38%), Positives = 42/77 (54%)
Frame = -2
Query: 451 STTVDLHISDEIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNE 272
ST + L E+W NYS L +FGC Y + ++ K++ KS+KCIF+ + V
Sbjct: 625 STAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKG 684
Query: 271 YRLWNSETRNAFVSRVV 221
YRLW+ R VSR V
Sbjct: 685 YRLWDPTARKVVVSRDV 701
>gb|ABA99467.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1136
Score = 63.5 bits (153), Expect = 9e-09
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = -2
Query: 421 EIWREGSVNYSQLRIFGCSAYSLVVCRKMNKIELKSKKCIFIRFKHGVNEYRLWNSETRN 242
E+W +YSQLR+FGC+AY+ V K+E ++ KC+F+ + GV Y+LWN +T
Sbjct: 432 EVWSGMPADYSQLRVFGCTAYAHV---DNGKLEPRAIKCLFLSYGSGVKGYKLWNPQTNK 488
Query: 241 AFVSRVV 221
F+SR V
Sbjct: 489 TFMSRSV 495