BLASTX nr result

ID: Ophiopogon22_contig00024260 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00024260
         (400 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK55500.1| uncharacterized protein A4U43_UnF2300 [Asparagus ...    79   5e-16
ref|XP_020271996.1| uncharacterized protein LOC109847164 [Aspara...    60   8e-08
gb|ABD63166.1| retrotransposon del1-46, related [Asparagus offic...    55   9e-07
ref|XP_020271803.1| LOW QUALITY PROTEIN: galactinol synthase 2-l...    56   2e-06

>gb|ONK55500.1| uncharacterized protein A4U43_UnF2300 [Asparagus officinalis]
          Length = 141

 Score = 79.0 bits (193), Expect = 5e-16
 Identities = 49/139 (35%), Positives = 66/139 (47%), Gaps = 21/139 (15%)
 Frame = -3

Query: 365 GKTRTIRSGPAEGFGSDGGE-----APQYLIDLLAPLSARMGVIXXXXXXXXXXXXXXXX 201
           G+ R  R   A+G   +  E     A QYL+DL+APL+ARM  I                
Sbjct: 3   GRGRGCRVSRAQGVEQEDREPKPQQASQYLVDLIAPLAARMAAIEEQLAAQVRQEPSVHE 62

Query: 200 XXXXXXXXXXXXP----------------VSEMETWLRLVERYQKLKAPDFQGSLDSVVA 69
                                        + + E WLRLVERYQKLKAP+F GS +S+VA
Sbjct: 63  EAPVQESSIREEIPERAPVVPPTPPVDNRIDDQEAWLRLVERYQKLKAPEFHGSTNSIVA 122

Query: 68  VRWKEDVGNILDLMGVDPV 12
            +WK+DV NILD++ V+ +
Sbjct: 123 HKWKKDVSNILDMLNVNTI 141


>ref|XP_020271996.1| uncharacterized protein LOC109847164 [Asparagus officinalis]
          Length = 302

 Score = 59.7 bits (143), Expect = 8e-08
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = -3

Query: 158 SEMETWLRLVERYQKLKAPDFQGSLDSVVAVRWKED 51
           ++ E WLRLVERYQKLKAP+F GS DS+ A +WKED
Sbjct: 51  ADQEAWLRLVERYQKLKAPEFHGSTDSIAAHKWKED 86


>gb|ABD63166.1| retrotransposon del1-46, related [Asparagus officinalis]
          Length = 136

 Score = 54.7 bits (130), Expect = 9e-07
 Identities = 23/37 (62%), Positives = 31/37 (83%)
 Frame = -3

Query: 113 LKAPDFQGSLDSVVAVRWKEDVGNILDLMGVDPVQRQ 3
           ++AP+FQGS D +VA +WKEDV NILD++ VD VQ+Q
Sbjct: 1   MRAPEFQGSADPLVAHKWKEDVSNILDILSVDSVQKQ 37


>ref|XP_020271803.1| LOW QUALITY PROTEIN: galactinol synthase 2-like [Asparagus
           officinalis]
          Length = 501

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 23/37 (62%), Positives = 32/37 (86%)
 Frame = -3

Query: 158 SEMETWLRLVERYQKLKAPDFQGSLDSVVAVRWKEDV 48
           +E ETWL LVERYQK++AP F+GS DS+VA +WK+++
Sbjct: 356 TEQETWLHLVERYQKMRAPKFRGSSDSLVAHKWKKEL 392


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