BLASTX nr result
ID: Ophiopogon22_contig00024231
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00024231
(351 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020249791.1| mediator of RNA polymerase II transcription ... 175 2e-48
ref|XP_020254459.1| mediator of RNA polymerase II transcription ... 171 4e-47
ref|XP_020254458.1| mediator of RNA polymerase II transcription ... 171 4e-47
ref|XP_020254457.1| mediator of RNA polymerase II transcription ... 171 4e-47
gb|PKA48041.1| Mediator of RNA polymerase II transcription subun... 159 6e-43
ref|XP_008811115.1| PREDICTED: mediator of RNA polymerase II tra... 155 1e-41
ref|XP_019702411.1| PREDICTED: mediator of RNA polymerase II tra... 153 1e-40
ref|XP_010907359.1| PREDICTED: mediator of RNA polymerase II tra... 153 1e-40
ref|XP_020674104.1| mediator of RNA polymerase II transcription ... 150 1e-39
ref|XP_020674103.1| mediator of RNA polymerase II transcription ... 150 1e-39
ref|XP_020674102.1| mediator of RNA polymerase II transcription ... 150 1e-39
ref|XP_020674100.1| mediator of RNA polymerase II transcription ... 150 1e-39
ref|XP_009379762.1| PREDICTED: mediator of RNA polymerase II tra... 146 2e-38
ref|XP_020598943.1| mediator of RNA polymerase II transcription ... 145 4e-38
ref|XP_020094271.1| mediator of RNA polymerase II transcription ... 145 5e-38
gb|OAY75728.1| Mediator of RNA polymerase II transcription subun... 145 5e-38
ref|XP_020094270.1| mediator of RNA polymerase II transcription ... 145 5e-38
ref|XP_020094268.1| mediator of RNA polymerase II transcription ... 145 5e-38
ref|XP_010918570.1| PREDICTED: mediator of RNA polymerase II tra... 141 2e-36
ref|XP_010918568.1| PREDICTED: mediator of RNA polymerase II tra... 141 2e-36
>ref|XP_020249791.1| mediator of RNA polymerase II transcription subunit 12-like
[Asparagus officinalis]
gb|ONK55508.1| uncharacterized protein A4U43_UnF2100 [Asparagus officinalis]
Length = 2224
Score = 175 bits (444), Expect = 2e-48
Identities = 88/113 (77%), Positives = 95/113 (84%)
Frame = +3
Query: 3 FDEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFSGGDPKPPTEKWGDSYQ 182
FD++FRQKMSGR SRT +MK+IVQ HVEE+VHYFYGKERK +GG K P EKW D+YQ
Sbjct: 1208 FDDYFRQKMSGRTSRTVSIMKQIVQGHVEESVHYFYGKERKVSTGGTSKSPPEKWDDAYQ 1267
Query: 183 VAQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLDGIPNN 341
VAQDIVQ LVDCIRQNGGAT EGDPSIVASAVSAIINSV PAV KLLD NN
Sbjct: 1268 VAQDIVQGLVDCIRQNGGATLEGDPSIVASAVSAIINSVAPAVCKLLDMSTNN 1320
>ref|XP_020254459.1| mediator of RNA polymerase II transcription subunit 12-like isoform
X3 [Asparagus officinalis]
Length = 2221
Score = 171 bits (434), Expect = 4e-47
Identities = 86/116 (74%), Positives = 94/116 (81%)
Frame = +3
Query: 3 FDEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFSGGDPKPPTEKWGDSYQ 182
FD++FR KM+GR SRTGPVMK +VQRH+EE V YFY KERK F GG PK EK D+YQ
Sbjct: 1202 FDDYFRHKMNGRTSRTGPVMKGVVQRHIEEVVRYFYAKERKPFEGGTPKSLPEKLDDAYQ 1261
Query: 183 VAQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLDGIPNNNCQ 350
VAQ IVQ LV+CIRQNGGAT EGDPSIVASAVSAII+SVGP V KLLD PNNN Q
Sbjct: 1262 VAQGIVQGLVECIRQNGGATLEGDPSIVASAVSAIISSVGPPVAKLLDVNPNNNYQ 1317
>ref|XP_020254458.1| mediator of RNA polymerase II transcription subunit 12-like isoform
X2 [Asparagus officinalis]
Length = 2238
Score = 171 bits (434), Expect = 4e-47
Identities = 86/116 (74%), Positives = 94/116 (81%)
Frame = +3
Query: 3 FDEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFSGGDPKPPTEKWGDSYQ 182
FD++FR KM+GR SRTGPVMK +VQRH+EE V YFY KERK F GG PK EK D+YQ
Sbjct: 1219 FDDYFRHKMNGRTSRTGPVMKGVVQRHIEEVVRYFYAKERKPFEGGTPKSLPEKLDDAYQ 1278
Query: 183 VAQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLDGIPNNNCQ 350
VAQ IVQ LV+CIRQNGGAT EGDPSIVASAVSAII+SVGP V KLLD PNNN Q
Sbjct: 1279 VAQGIVQGLVECIRQNGGATLEGDPSIVASAVSAIISSVGPPVAKLLDVNPNNNYQ 1334
>ref|XP_020254457.1| mediator of RNA polymerase II transcription subunit 12-like isoform
X1 [Asparagus officinalis]
gb|ONK78252.1| uncharacterized protein A4U43_C02F16240 [Asparagus officinalis]
Length = 2241
Score = 171 bits (434), Expect = 4e-47
Identities = 86/116 (74%), Positives = 94/116 (81%)
Frame = +3
Query: 3 FDEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFSGGDPKPPTEKWGDSYQ 182
FD++FR KM+GR SRTGPVMK +VQRH+EE V YFY KERK F GG PK EK D+YQ
Sbjct: 1222 FDDYFRHKMNGRTSRTGPVMKGVVQRHIEEVVRYFYAKERKPFEGGTPKSLPEKLDDAYQ 1281
Query: 183 VAQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLDGIPNNNCQ 350
VAQ IVQ LV+CIRQNGGAT EGDPSIVASAVSAII+SVGP V KLLD PNNN Q
Sbjct: 1282 VAQGIVQGLVECIRQNGGATLEGDPSIVASAVSAIISSVGPPVAKLLDVNPNNNYQ 1337
>gb|PKA48041.1| Mediator of RNA polymerase II transcription subunit 12 [Apostasia
shenzhenica]
Length = 2250
Score = 159 bits (403), Expect = 6e-43
Identities = 77/114 (67%), Positives = 92/114 (80%)
Frame = +3
Query: 3 FDEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFSGGDPKPPTEKWGDSYQ 182
FDE+ RQK+SGRVSRTG MKEIVQRHVEEA+HYFYGKE+K F+ +PK TEKW D+YQ
Sbjct: 1236 FDEYIRQKISGRVSRTGLGMKEIVQRHVEEAMHYFYGKEKKPFAAANPKNFTEKWADAYQ 1295
Query: 183 VAQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLDGIPNNN 344
VA +IV L DCIRQNGGA EGDPSI+ASA+SAI+ ++G AV+K+ D NN
Sbjct: 1296 VAHEIVTGLADCIRQNGGAALEGDPSILASAISAIVGNIGSAVLKVPDFTGGNN 1349
>ref|XP_008811115.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Phoenix dactylifera]
Length = 2240
Score = 155 bits (393), Expect = 1e-41
Identities = 80/113 (70%), Positives = 91/113 (80%), Gaps = 1/113 (0%)
Frame = +3
Query: 6 DEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFSGGDPKPPT-EKWGDSYQ 182
DE+ RQKM+GR+SRT P +KE+VQRHVEEAVHYFYGKERK FS +PK + E W DS Q
Sbjct: 1217 DEYIRQKMTGRLSRTSPNLKEMVQRHVEEAVHYFYGKERKLFSVNNPKGSSLENWEDSNQ 1276
Query: 183 VAQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLDGIPNN 341
+AQDIV L+DCIRQNGGAT EGDPSIVASAVSAI+ SVGPA+ KL D N
Sbjct: 1277 IAQDIVLGLLDCIRQNGGATLEGDPSIVASAVSAIVGSVGPAISKLPDFTSGN 1329
>ref|XP_019702411.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X2 [Elaeis guineensis]
Length = 2031
Score = 153 bits (386), Expect = 1e-40
Identities = 78/113 (69%), Positives = 90/113 (79%), Gaps = 1/113 (0%)
Frame = +3
Query: 6 DEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFSGGDPKPPT-EKWGDSYQ 182
DE+ RQKM+GR+SRT P +KE+VQR VEE VHYFYGKERK F +PK + E W DS Q
Sbjct: 1214 DEYIRQKMTGRLSRTSPTLKEMVQRRVEEVVHYFYGKERKPFPVNNPKGSSLETWEDSNQ 1273
Query: 183 VAQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLDGIPNN 341
VAQDIV L+DCIRQNGGAT EGDPSIVASAVSAI+ +VGPA+ KLLD +N
Sbjct: 1274 VAQDIVLGLLDCIRQNGGATLEGDPSIVASAVSAIVGNVGPAISKLLDFTSSN 1326
>ref|XP_010907359.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Elaeis guineensis]
ref|XP_010907360.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Elaeis guineensis]
ref|XP_019702408.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Elaeis guineensis]
ref|XP_019702409.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Elaeis guineensis]
Length = 2235
Score = 153 bits (386), Expect = 1e-40
Identities = 78/113 (69%), Positives = 90/113 (79%), Gaps = 1/113 (0%)
Frame = +3
Query: 6 DEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFSGGDPKPPT-EKWGDSYQ 182
DE+ RQKM+GR+SRT P +KE+VQR VEE VHYFYGKERK F +PK + E W DS Q
Sbjct: 1214 DEYIRQKMTGRLSRTSPTLKEMVQRRVEEVVHYFYGKERKPFPVNNPKGSSLETWEDSNQ 1273
Query: 183 VAQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLDGIPNN 341
VAQDIV L+DCIRQNGGAT EGDPSIVASAVSAI+ +VGPA+ KLLD +N
Sbjct: 1274 VAQDIVLGLLDCIRQNGGATLEGDPSIVASAVSAIVGNVGPAISKLLDFTSSN 1326
>ref|XP_020674104.1| mediator of RNA polymerase II transcription subunit 12 isoform X4
[Dendrobium catenatum]
Length = 2025
Score = 150 bits (378), Expect = 1e-39
Identities = 74/110 (67%), Positives = 91/110 (82%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 FDEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFS--GGDPKPPTEKWGDS 176
FDE+ RQK++ RVSRTG MK+IVQRHVEEA+HYFYGKERK F+ + K TEKW D+
Sbjct: 1244 FDEYIRQKITVRVSRTGSSMKDIVQRHVEEAMHYFYGKERKPFATVNANSKNFTEKWDDA 1303
Query: 177 YQVAQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLD 326
YQVA +IV L+DCIRQNGGAT EGDPSI+ASAVS+I+ +VGP+V+K+ D
Sbjct: 1304 YQVAHEIVTGLIDCIRQNGGATFEGDPSILASAVSSIVGNVGPSVVKVPD 1353
>ref|XP_020674103.1| mediator of RNA polymerase II transcription subunit 12 isoform X3
[Dendrobium catenatum]
Length = 2239
Score = 150 bits (378), Expect = 1e-39
Identities = 74/110 (67%), Positives = 91/110 (82%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 FDEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFS--GGDPKPPTEKWGDS 176
FDE+ RQK++ RVSRTG MK+IVQRHVEEA+HYFYGKERK F+ + K TEKW D+
Sbjct: 1220 FDEYIRQKITVRVSRTGSSMKDIVQRHVEEAMHYFYGKERKPFATVNANSKNFTEKWDDA 1279
Query: 177 YQVAQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLD 326
YQVA +IV L+DCIRQNGGAT EGDPSI+ASAVS+I+ +VGP+V+K+ D
Sbjct: 1280 YQVAHEIVTGLIDCIRQNGGATFEGDPSILASAVSSIVGNVGPSVVKVPD 1329
>ref|XP_020674102.1| mediator of RNA polymerase II transcription subunit 12 isoform X2
[Dendrobium catenatum]
Length = 2249
Score = 150 bits (378), Expect = 1e-39
Identities = 74/110 (67%), Positives = 91/110 (82%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 FDEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFS--GGDPKPPTEKWGDS 176
FDE+ RQK++ RVSRTG MK+IVQRHVEEA+HYFYGKERK F+ + K TEKW D+
Sbjct: 1230 FDEYIRQKITVRVSRTGSSMKDIVQRHVEEAMHYFYGKERKPFATVNANSKNFTEKWDDA 1289
Query: 177 YQVAQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLD 326
YQVA +IV L+DCIRQNGGAT EGDPSI+ASAVS+I+ +VGP+V+K+ D
Sbjct: 1290 YQVAHEIVTGLIDCIRQNGGATFEGDPSILASAVSSIVGNVGPSVVKVPD 1339
>ref|XP_020674100.1| mediator of RNA polymerase II transcription subunit 12 isoform X1
[Dendrobium catenatum]
ref|XP_020674101.1| mediator of RNA polymerase II transcription subunit 12 isoform X1
[Dendrobium catenatum]
gb|PKU81255.1| Mediator of RNA polymerase II transcription subunit 12 [Dendrobium
catenatum]
Length = 2263
Score = 150 bits (378), Expect = 1e-39
Identities = 74/110 (67%), Positives = 91/110 (82%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 FDEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFS--GGDPKPPTEKWGDS 176
FDE+ RQK++ RVSRTG MK+IVQRHVEEA+HYFYGKERK F+ + K TEKW D+
Sbjct: 1244 FDEYIRQKITVRVSRTGSSMKDIVQRHVEEAMHYFYGKERKPFATVNANSKNFTEKWDDA 1303
Query: 177 YQVAQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLD 326
YQVA +IV L+DCIRQNGGAT EGDPSI+ASAVS+I+ +VGP+V+K+ D
Sbjct: 1304 YQVAHEIVTGLIDCIRQNGGATFEGDPSILASAVSSIVGNVGPSVVKVPD 1353
>ref|XP_009379762.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Musa acuminata subsp. malaccensis]
Length = 2224
Score = 146 bits (369), Expect = 2e-38
Identities = 74/116 (63%), Positives = 89/116 (76%), Gaps = 1/116 (0%)
Frame = +3
Query: 6 DEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFSGGDPKPPT-EKWGDSYQ 182
DE RQK++ R+SRTG MKE+VQRHVE AVHYFYGKERK + P+ + EKW DSYQ
Sbjct: 1217 DEHIRQKINARMSRTGTNMKELVQRHVEGAVHYFYGKERKLSAVATPRNHSLEKWDDSYQ 1276
Query: 183 VAQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLDGIPNNNCQ 350
+A DIV LVDCIRQNGGATP+GDP +VASAVSAI+ S+G A+ KL D ++N Q
Sbjct: 1277 IAHDIVLGLVDCIRQNGGATPDGDPCVVASAVSAIVGSIGLAIAKLPDSTASSNYQ 1332
>ref|XP_020598943.1| mediator of RNA polymerase II transcription subunit 12 [Phalaenopsis
equestris]
ref|XP_020598944.1| mediator of RNA polymerase II transcription subunit 12 [Phalaenopsis
equestris]
ref|XP_020598945.1| mediator of RNA polymerase II transcription subunit 12 [Phalaenopsis
equestris]
ref|XP_020598946.1| mediator of RNA polymerase II transcription subunit 12 [Phalaenopsis
equestris]
Length = 2242
Score = 145 bits (367), Expect = 4e-38
Identities = 76/117 (64%), Positives = 92/117 (78%), Gaps = 2/117 (1%)
Frame = +3
Query: 3 FDEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFSGGDP--KPPTEKWGDS 176
FD++ RQK++ RVSRTG MKEIVQRHVEEA+HYFYGKERK F+ + K TEKW D+
Sbjct: 1227 FDDYIRQKITVRVSRTGSSMKEIVQRHVEEAMHYFYGKERKPFTTANANFKNSTEKWDDA 1286
Query: 177 YQVAQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLDGIPNNNC 347
QVAQ+IV L DCIRQNGGA EGDPSIVASAVS+I+ ++GP+V+K+ D I NC
Sbjct: 1287 CQVAQEIVTGLNDCIRQNGGAALEGDPSIVASAVSSIVGNLGPSVVKVPDFI---NC 1340
>ref|XP_020094271.1| mediator of RNA polymerase II transcription subunit 12 isoform X3
[Ananas comosus]
Length = 2201
Score = 145 bits (366), Expect = 5e-38
Identities = 72/107 (67%), Positives = 85/107 (79%)
Frame = +3
Query: 6 DEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFSGGDPKPPTEKWGDSYQV 185
DE RQK+SGR+ RT MKEIVQRHVEEA+H+FYGKERK + P+ P EKW DSYQ+
Sbjct: 1172 DEHIRQKLSGRMPRTVTNMKEIVQRHVEEALHHFYGKERKNIATA-PRTPPEKWEDSYQI 1230
Query: 186 AQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLD 326
A DIV L+DCIRQN GATP+GDPS+VASAV+AI+ +VG AV KL D
Sbjct: 1231 AHDIVMGLLDCIRQNAGATPDGDPSVVASAVAAIVGNVGLAVAKLPD 1277
>gb|OAY75728.1| Mediator of RNA polymerase II transcription subunit 12 [Ananas
comosus]
Length = 2222
Score = 145 bits (366), Expect = 5e-38
Identities = 72/107 (67%), Positives = 85/107 (79%)
Frame = +3
Query: 6 DEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFSGGDPKPPTEKWGDSYQV 185
DE RQK+SGR+ RT MKEIVQRHVEEA+H+FYGKERK + P+ P EKW DSYQ+
Sbjct: 1193 DEHIRQKLSGRMPRTVTNMKEIVQRHVEEALHHFYGKERKNIATA-PRTPPEKWEDSYQI 1251
Query: 186 AQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLD 326
A DIV L+DCIRQN GATP+GDPS+VASAV+AI+ +VG AV KL D
Sbjct: 1252 AHDIVMGLLDCIRQNAGATPDGDPSVVASAVAAIVGNVGLAVAKLPD 1298
>ref|XP_020094270.1| mediator of RNA polymerase II transcription subunit 12 isoform X2
[Ananas comosus]
Length = 2231
Score = 145 bits (366), Expect = 5e-38
Identities = 72/107 (67%), Positives = 85/107 (79%)
Frame = +3
Query: 6 DEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFSGGDPKPPTEKWGDSYQV 185
DE RQK+SGR+ RT MKEIVQRHVEEA+H+FYGKERK + P+ P EKW DSYQ+
Sbjct: 1205 DEHIRQKLSGRMPRTVTNMKEIVQRHVEEALHHFYGKERKNIATA-PRTPPEKWEDSYQI 1263
Query: 186 AQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLD 326
A DIV L+DCIRQN GATP+GDPS+VASAV+AI+ +VG AV KL D
Sbjct: 1264 AHDIVMGLLDCIRQNAGATPDGDPSVVASAVAAIVGNVGLAVAKLPD 1310
>ref|XP_020094268.1| mediator of RNA polymerase II transcription subunit 12 isoform X1
[Ananas comosus]
ref|XP_020094269.1| mediator of RNA polymerase II transcription subunit 12 isoform X1
[Ananas comosus]
Length = 2234
Score = 145 bits (366), Expect = 5e-38
Identities = 72/107 (67%), Positives = 85/107 (79%)
Frame = +3
Query: 6 DEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFSGGDPKPPTEKWGDSYQV 185
DE RQK+SGR+ RT MKEIVQRHVEEA+H+FYGKERK + P+ P EKW DSYQ+
Sbjct: 1205 DEHIRQKLSGRMPRTVTNMKEIVQRHVEEALHHFYGKERKNIATA-PRTPPEKWEDSYQI 1263
Query: 186 AQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLD 326
A DIV L+DCIRQN GATP+GDPS+VASAV+AI+ +VG AV KL D
Sbjct: 1264 AHDIVMGLLDCIRQNAGATPDGDPSVVASAVAAIVGNVGLAVAKLPD 1310
>ref|XP_010918570.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X3 [Elaeis guineensis]
Length = 1917
Score = 141 bits (355), Expect = 2e-36
Identities = 71/108 (65%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Frame = +3
Query: 6 DEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFSGGDPKPPT-EKWGDSYQ 182
DE+ RQKM+GR+ R P ++E+VQRHVEE V FYGKERK F +PK P E W DS Q
Sbjct: 899 DEYLRQKMTGRLPRGSPSLREMVQRHVEEVVRCFYGKERKPFPVSNPKGPVLENWEDSNQ 958
Query: 183 VAQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLD 326
+AQDIV L+DCIRQNGGAT EGDPSIVASAVSAI+ +VGP++ KL D
Sbjct: 959 IAQDIVLGLLDCIRQNGGATLEGDPSIVASAVSAIVGNVGPSISKLPD 1006
>ref|XP_010918568.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X2 [Elaeis guineensis]
Length = 2213
Score = 141 bits (355), Expect = 2e-36
Identities = 71/108 (65%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Frame = +3
Query: 6 DEFFRQKMSGRVSRTGPVMKEIVQRHVEEAVHYFYGKERKGFSGGDPKPPT-EKWGDSYQ 182
DE+ RQKM+GR+ R P ++E+VQRHVEE V FYGKERK F +PK P E W DS Q
Sbjct: 1195 DEYLRQKMTGRLPRGSPSLREMVQRHVEEVVRCFYGKERKPFPVSNPKGPVLENWEDSNQ 1254
Query: 183 VAQDIVQALVDCIRQNGGATPEGDPSIVASAVSAIINSVGPAVIKLLD 326
+AQDIV L+DCIRQNGGAT EGDPSIVASAVSAI+ +VGP++ KL D
Sbjct: 1255 IAQDIVLGLLDCIRQNGGATLEGDPSIVASAVSAIVGNVGPSISKLPD 1302