BLASTX nr result

ID: Ophiopogon22_contig00023915 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00023915
         (898 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMP00083.1| Glycoside hydrolase, family 28 [Corchorus olitorius]    59   7e-06

>gb|OMP00083.1| Glycoside hydrolase, family 28 [Corchorus olitorius]
          Length = 682

 Score = 58.5 bits (140), Expect = 7e-06
 Identities = 24/45 (53%), Positives = 30/45 (66%)
 Frame = -1

Query: 292 TKQITKDYIYQKWLIFTHVNGLVVNGSGTINVQGQIWWKRNCTSK 158
           +K   K Y   +WL FTHVNGL++NGSGTIN +G  WW + C  K
Sbjct: 379 SKSSWKGYPINRWLAFTHVNGLMINGSGTINGRGSAWWPQPCLHK 423


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