BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00023888
         (1005 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]     72   5e-10
gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officin...    69   4e-09
ref|XP_020257082.1| serrate RNA effector molecule homolog [Aspar...    65   4e-08
gb|ONK76793.1| uncharacterized protein A4U43_C03F32200 [Asparagu...    59   4e-06

>gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 926

 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
 Frame = +3

Query: 342 KKNADRRKRYQARRQHAKNLAAKAEQGNAT---LPRR------------ECHDLSIKRDP 476
           KKNA RR+R   RR H +   ++ ++ +     LP+             +   + +KRDP
Sbjct: 124 KKNAARRRRRSIRRAHLRENQSRVQRKDCVSEDLPKHCERTLRGNESNYKPRVIQLKRDP 183

Query: 477 RVALVQ-RDSRVRLEKCNSRVAQSFSPKRDSRVGIQRPSALLQRDPRVRHWSDARATAQR 653
           +  +VQ + S V+ ++      Q+   K+D +  +  PS   +  P V         ++R
Sbjct: 184 QWCVVQSKHSPVKGKQAPQECVQT---KQDPQGSV--PSTKRRPRPSVYR-------SKR 231

Query: 654 DPRVSVPMLRGYAKCQA--VQAADELGVPQAHTKDVQISPGQSDMRDYLARKRGVHQCTP 827
           DP  S P      + Q   +    E GV    +  ++  P  SD+R+ L+R++   +   
Sbjct: 232 DPHASTPECNRVRQVQQEPISPTQEQGV----SSPMKNCPRVSDLRELLSREKPTQRAAH 287

Query: 828 HCHCEQLISAALSGYHCSFQTTKPSIFSRLSKVAATSLSRRR 953
            CHCE+LIS  LS  HC     + S+F RL+ VA  +  RR+
Sbjct: 288 PCHCERLISTVLSECHCCISEPRRSVFDRLTDVARPTKRRRQ 329


>gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officinalis]
          Length = 869

 Score = 69.3 bits (168), Expect = 4e-09
 Identities = 81/298 (27%), Positives = 122/298 (40%), Gaps = 59/298 (19%)
 Frame = +3

Query: 252 RVSSAPTAPAERVSAPAVQTAGGSYVTPPTKKNADRRKRYQARRQHAKNLAAKAEQ---- 419
           R SS    P E  S+ +V       +    KKNA RR+R   RR H   ++    +    
Sbjct: 95  RRSSGHKRPLEETSSISVNDVAAKALKQ-AKKNAARRRRRSIRRAHLHRVSKNPTEPSVP 153

Query: 420 -GNATL----PRRECHDLSIKRDP-------------RVALVQRDSRVRLE-KCNSRVAQ 542
            G  +L    P  E   + +K DP             R A  +RD + R+    +SR + 
Sbjct: 154 KGERSLRGNEPNYEPRLIQLKCDPEWRVVSSKRSPQRRAAKTKRDPQGRVPINHDSRESG 213

Query: 543 SFSPKRDSRVGIQ-----RPSALLQRDP--RVRHWSDARAT--------------AQRDP 659
           S  PKRD +  +Q     + S   +RDP  RV+   D + +              A+RDP
Sbjct: 214 SVQPKRDPQGNVQPKRDPQGSVQPKRDPQGRVQPKHDPQGSVSSFKRRPRPNVFKAKRDP 273

Query: 660 RVSVPML------------RGY---AKCQAVQAADELGVPQAHTKDVQISPGQSDMRDYL 794
           RV +               RG+    + + +      GV        ++S   SD+R+ L
Sbjct: 274 RVILQERDLQEVRQVQKNQRGFKIHVQREPISPTQGQGVQSPPPSPGKVSSQVSDLRELL 333

Query: 795 ARKRGVHQCTPHCHCEQLISAALSGYHCSFQTTKPSIFSRLSKVAATSLSRRRHLRRK 968
           +R +   Q    C CE+LISA LS   C   T + S+F RL+ V   +  R+R  R+K
Sbjct: 334 SRGKPTIQAAHSCQCERLISAVLSECPCCAPTPRQSVFDRLTNVVRPA-KRQRRCRKK 390


>ref|XP_020257082.1| serrate RNA effector molecule homolog [Asparagus officinalis]
          Length = 310

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 32/65 (49%), Positives = 39/65 (60%)
 Frame = +3

Query: 774 SDMRDYLARKRGVHQCTPHCHCEQLISAALSGYHCSFQTTKPSIFSRLSKVAATSLSRRR 953
           SD+RDYL RKR ++Q   HC CE+LIS   S   C     K S+F RL + +  S SRRR
Sbjct: 11  SDLRDYLTRKRNINQMQSHCCCEKLISVVFSQCPCRESAHKSSVFKRLIEPSTISSSRRR 70

Query: 954 HLRRK 968
           H R K
Sbjct: 71  HFRPK 75


>gb|ONK76793.1| uncharacterized protein A4U43_C03F32200 [Asparagus officinalis]
          Length = 351

 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 26/53 (49%), Positives = 34/53 (64%)
 Frame = +3

Query: 765 PGQSDMRDYLARKRGVHQCTPHCHCEQLISAALSGYHCSFQTTKPSIFSRLSK 923
           P   D+R+YL RKR +H+  P CHCE+LI   L+   C   T KPS+F RLS+
Sbjct: 297 PPTEDLREYLTRKRTIHKANPQCHCERLIHTVLADCQC-IGTAKPSVFERLSQ 348