BLASTX nr result
ID: Ophiopogon22_contig00023550
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00023550
(656 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera] 341 e-111
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 332 e-107
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera] 343 e-107
gb|ADJ18449.1| gag/pol protein, partial [Bryonia dioica] 332 e-103
ref|XP_017233167.1| PREDICTED: uncharacterized protein LOC108207... 328 e-100
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera] 325 3e-99
gb|AMY96445.1| gag/pol protein [Momordica dioica] 313 2e-95
gb|PKI69339.1| hypothetical protein CRG98_010273 [Punica granatum] 280 8e-90
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e... 289 9e-89
emb|CAN83735.1| hypothetical protein VITISV_000740 [Vitis vinifera] 269 3e-88
gb|KYP76577.1| Retrovirus-related Pol polyprotein from transposo... 271 2e-87
gb|PKI46224.1| hypothetical protein CRG98_033396 [Punica granatum] 268 2e-87
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 286 4e-87
gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subc... 283 2e-86
dbj|BAA22288.1| polyprotein [Oryza australiensis] 287 3e-86
gb|PNX89581.1| retrotransposon protein putative Ty1-copia sub-cl... 261 7e-86
gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-... 264 3e-85
gb|PKU62438.1| Retrovirus-related Pol polyprotein from transposo... 265 2e-84
gb|PKA64902.1| Retrovirus-related Pol polyprotein from transposo... 260 3e-84
gb|PPY93112.1| hypothetical protein C5P31_25365, partial [Escher... 275 6e-84
>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
Length = 633
Score = 341 bits (874), Expect = e-111
Identities = 166/218 (76%), Positives = 182/218 (83%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YID IL RF+MQ SKKGFLPFRHGI LSK Q PKTPEE E M +PY+SA+GSLMYAMLC
Sbjct: 363 YIDTILNRFNMQGSKKGFLPFRHGIXLSKDQSPKTPEEIESMKAVPYASAVGSLMYAMLC 422
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGGEDLVPIGYTDSDFM 361
TRPDICFAVGMVSR+QS+ G +HW AVKHIIKYLKRTRD+MLVF E+L PIGYTDSDF
Sbjct: 423 TRPDICFAVGMVSRFQSNXGREHWXAVKHIIKYLKRTRDYMLVFQSENLXPIGYTDSDFQ 482
Query: 362 SDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLMEL 541
SDQDSRKSTSG F LGGGA+SW S+KQ VADST EAEYVAASEA+KEA WLR FL++L
Sbjct: 483 SDQDSRKSTSGNVFXLGGGAISWRSIKQTXVADSTMEAEYVAASEAAKEAVWLRNFLLDL 542
Query: 542 GVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
GVVP I LYCDNSGAVANSKEPR K +H+ERK
Sbjct: 543 GVVPSVQSPITLYCDNSGAVANSKEPRSHKRAKHIERK 580
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 332 bits (851), Expect = e-107
Identities = 157/218 (72%), Positives = 186/218 (85%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YIDK+L +F+M+NSKKG LP RHG+ LSK QCPKTP++ E M R+PY+SA+GSLMYAMLC
Sbjct: 398 YIDKVLVKFAMENSKKGNLPSRHGVHLSKEQCPKTPQDEEKMRRVPYASAVGSLMYAMLC 457
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGGEDLVPIGYTDSDFM 361
TRPDICFAVG+VSRYQS+PG DHW AVKHI+KYL+RTR++MLV+ G +L+PIGYTDSDF
Sbjct: 458 TRPDICFAVGVVSRYQSNPGLDHWVAVKHILKYLRRTRNYMLVYSGRELIPIGYTDSDFQ 517
Query: 362 SDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLMEL 541
SD+DSRKSTS FTLGGGA+ W SVKQ CVADST EAEYVAA EA+KEA WLR+FL EL
Sbjct: 518 SDRDSRKSTSEAVFTLGGGAIIWRSVKQTCVADSTMEAEYVAACEAAKEAVWLREFLKEL 577
Query: 542 GVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
VVP+ + I LYCDNSGAVAN+KEPR + +H+ERK
Sbjct: 578 EVVPNMHEPIRLYCDNSGAVANAKEPRNHRKGKHIERK 615
>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
Length = 1285
Score = 343 bits (880), Expect = e-107
Identities = 167/218 (76%), Positives = 183/218 (83%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YID IL RF+MQ SKKGFLPFRHGI LSK Q PKTPEE E M +PY+SA+GSLMYAMLC
Sbjct: 1015 YIDTILNRFNMQGSKKGFLPFRHGIVLSKDQSPKTPEEIESMKAVPYASAVGSLMYAMLC 1074
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGGEDLVPIGYTDSDFM 361
TRPDI FAVGMVSR+QS+PG +HWTAVKHIIKYLKRTRD+MLVF E+LVPIGYTDSDF
Sbjct: 1075 TRPDIYFAVGMVSRFQSNPGREHWTAVKHIIKYLKRTRDYMLVFQSENLVPIGYTDSDFQ 1134
Query: 362 SDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLMEL 541
SDQDSRKSTSG F LGGGA+SW S+KQ CVAD T EAEYVAASEA+KEA WLR FL++L
Sbjct: 1135 SDQDSRKSTSGNVFVLGGGAISWRSIKQTCVADFTMEAEYVAASEAAKEAVWLRNFLLDL 1194
Query: 542 GVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
GVVP I LYCDNSGAVANSKEPR K +H+ RK
Sbjct: 1195 GVVPSVQSPITLYCDNSGAVANSKEPRSHKRAKHIXRK 1232
>gb|ADJ18449.1| gag/pol protein, partial [Bryonia dioica]
Length = 1292
Score = 332 bits (852), Expect = e-103
Identities = 160/218 (73%), Positives = 184/218 (84%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YIDK+L R+ MQNSKKG LPFRHGI LSK QCPKTP+E E M IPYSSA+GSLMYAMLC
Sbjct: 1058 YIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLC 1117
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGGEDLVPIGYTDSDFM 361
TRPDIC++VG+VSRYQS+PG DHWTAVK+I+KYL+RTR++MLV+G +DL+ GYTDSDF
Sbjct: 1118 TRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRTRNYMLVYGAKDLILTGYTDSDFQ 1177
Query: 362 SDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLMEL 541
SD+D+RKSTSG FTL GGAV W SVKQ C+ADST EAEYVAA EA+KEA WLRKFL +L
Sbjct: 1178 SDKDARKSTSGSVFTLNGGAVVWRSVKQTCIADSTMEAEYVAACEAAKEAVWLRKFLTDL 1237
Query: 542 GVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
VVP+ I LYCDNSGAVANSKEPR K +H+ERK
Sbjct: 1238 EVVPNMHLPITLYCDNSGAVANSKEPRSHKRGKHIERK 1275
>ref|XP_017233167.1| PREDICTED: uncharacterized protein LOC108207215, partial [Daucus
carota subsp. sativus]
Length = 3860
Score = 328 bits (840), Expect = e-100
Identities = 153/218 (70%), Positives = 183/218 (83%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YID +L RF+MQ+SKKG LPFRHG+ LSK QCP TP+E E M +PY+SA GSLMYAMLC
Sbjct: 1200 YIDDVLARFNMQDSKKGNLPFRHGVTLSKRQCPSTPKEIENMKAVPYASACGSLMYAMLC 1259
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGGEDLVPIGYTDSDFM 361
TRPDICFAVGMVSRYQS+PG +HW+AVK I+KYL+RT+++MLV+ DLVP+GYTDSDF
Sbjct: 1260 TRPDICFAVGMVSRYQSNPGQEHWSAVKAILKYLRRTKEYMLVYKSSDLVPLGYTDSDFQ 1319
Query: 362 SDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLMEL 541
+D+D RKSTSG FTLGGGAV W SVKQKC+ADST EAEYVAASEA+KEA W R FL++L
Sbjct: 1320 TDKDKRKSTSGCVFTLGGGAVIWRSVKQKCIADSTMEAEYVAASEAAKEAIWFRNFLLDL 1379
Query: 542 GVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
VVP+ + I +YCDN+GAVAN+KEPR K +H+ERK
Sbjct: 1380 DVVPNLPQQITIYCDNTGAVANTKEPRAHKAAKHIERK 1417
Score = 328 bits (840), Expect = e-100
Identities = 153/218 (70%), Positives = 183/218 (83%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YID +L RF+MQ+SKKG LPFRHG+ LSK QCP TP+E E M +PY+SA GSLMYAMLC
Sbjct: 2415 YIDDVLARFNMQDSKKGNLPFRHGVTLSKRQCPSTPKEIENMKAVPYASACGSLMYAMLC 2474
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGGEDLVPIGYTDSDFM 361
TRPDICFAVGMVSRYQS+PG +HW+AVK I+KYL+RT+++MLV+ DLVP+GYTDSDF
Sbjct: 2475 TRPDICFAVGMVSRYQSNPGQEHWSAVKAILKYLRRTKEYMLVYKSSDLVPLGYTDSDFQ 2534
Query: 362 SDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLMEL 541
+D+D RKSTSG FTLGGGAV W SVKQKC+ADST EAEYVAASEA+KEA W R FL++L
Sbjct: 2535 TDKDKRKSTSGCVFTLGGGAVIWRSVKQKCIADSTMEAEYVAASEAAKEAIWFRNFLLDL 2594
Query: 542 GVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
VVP+ + I +YCDN+GAVAN+KEPR K +H+ERK
Sbjct: 2595 DVVPNLPQQITIYCDNTGAVANTKEPRAHKAAKHIERK 2632
Score = 328 bits (840), Expect = e-100
Identities = 153/218 (70%), Positives = 183/218 (83%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YID +L RF+MQ+SKKG LPFRHG+ LSK QCP TP+E E M +PY+SA GSLMYAMLC
Sbjct: 3630 YIDDVLARFNMQDSKKGNLPFRHGVTLSKRQCPSTPKEIENMKAVPYASACGSLMYAMLC 3689
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGGEDLVPIGYTDSDFM 361
TRPDICFAVGMVSRYQS+PG +HW+AVK I+KYL+RT+++MLV+ DLVP+GYTDSDF
Sbjct: 3690 TRPDICFAVGMVSRYQSNPGQEHWSAVKAILKYLRRTKEYMLVYKSSDLVPLGYTDSDFQ 3749
Query: 362 SDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLMEL 541
+D+D RKSTSG FTLGGGAV W SVKQKC+ADST EAEYVAASEA+KEA W R FL++L
Sbjct: 3750 TDKDKRKSTSGCVFTLGGGAVIWRSVKQKCIADSTMEAEYVAASEAAKEAIWFRNFLLDL 3809
Query: 542 GVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
VVP+ + I +YCDN+GAVAN+KEPR K +H+ERK
Sbjct: 3810 DVVPNLPQQITIYCDNTGAVANTKEPRAHKAAKHIERK 3847
>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
Length = 1544
Score = 325 bits (832), Expect = 3e-99
Identities = 156/205 (76%), Positives = 172/205 (83%)
Frame = +2
Query: 41 SKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLCTRPDICFAVGMVS 220
S KGFLPFRHGI LSK Q PKTPEE E M +PY+SA+GSLMYAMLCTRPDICFAVGMVS
Sbjct: 1287 SNKGFLPFRHGIVLSKDQSPKTPEEIESMKAVPYASAVGSLMYAMLCTRPDICFAVGMVS 1346
Query: 221 RYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGGEDLVPIGYTDSDFMSDQDSRKSTSGYA 400
R+Q +PG +HWTAVKHIIKYLKRTRD+MLVF E+LVPIGYTDSDF SDQDSRKSTSG
Sbjct: 1347 RFQFNPGREHWTAVKHIIKYLKRTRDYMLVFQSENLVPIGYTDSDFQSDQDSRKSTSGNV 1406
Query: 401 FTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLMELGVVPDAAKAIVLY 580
F LG GA+SW S+KQ CVADST EA+YVAASEA+KE WLR FL++LGVVP I LY
Sbjct: 1407 FVLGSGAISWRSIKQTCVADSTMEAKYVAASEAAKEVVWLRNFLLDLGVVPSVQSPITLY 1466
Query: 581 CDNSGAVANSKEPRYTKGLRHVERK 655
CDNSGAVANSKEPR K +H+ERK
Sbjct: 1467 CDNSGAVANSKEPRSHKRAKHIERK 1491
>gb|AMY96445.1| gag/pol protein [Momordica dioica]
Length = 1313
Score = 313 bits (801), Expect = 2e-95
Identities = 155/219 (70%), Positives = 178/219 (81%), Gaps = 1/219 (0%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YIDK+L RF MQ+SKKG LPFRHGI LSK QCPKTP+E E M IPYSSAIGSLMYAMLC
Sbjct: 1074 YIDKVLSRFKMQDSKKGLLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAIGSLMYAMLC 1133
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGGE-DLVPIGYTDSDF 358
TRPD+C+A+ +VSRYQS+PG DHWTAVK+I+KYL+RTR+ LV+GG+ DL GYTDS F
Sbjct: 1134 TRPDVCYALSIVSRYQSNPGRDHWTAVKNILKYLRRTRNMFLVYGGDKDLAVKGYTDSSF 1193
Query: 359 MSDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLME 538
+D+D KS SG FTL GGAVSW S KQ CVADST EAEYVAA EA+KEA W+RKFL +
Sbjct: 1194 QTDKDDSKSQSG-VFTLNGGAVSWRSSKQTCVADSTCEAEYVAACEAAKEAVWIRKFLTD 1252
Query: 539 LGVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
LGVVP+ I LYCDNSGAVAN+KEPR K +H+ERK
Sbjct: 1253 LGVVPNMHLPITLYCDNSGAVANAKEPRSHKRGKHIERK 1291
>gb|PKI69339.1| hypothetical protein CRG98_010273 [Punica granatum]
Length = 431
Score = 280 bits (715), Expect = 8e-90
Identities = 132/216 (61%), Positives = 168/216 (77%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
Y+DK+L+RF+MQ+S++G LP RHGI LSK+ PKTP ERE MS +PY+ AIGSLMY MLC
Sbjct: 161 YLDKVLKRFNMQDSRRGLLPMRHGIHLSKAMSPKTPVEREKMSHVPYAPAIGSLMYVMLC 220
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGGEDLVPIGYTDSDFM 361
TR DI +AV M SRY+S+ GPDHWTA+K+I+KYL+RT++ +LV+GG +L +TDSDF
Sbjct: 221 TRSDIAYAVSMTSRYRSNSGPDHWTAIKNILKYLRRTKEIVLVYGGGELRLDEFTDSDFQ 280
Query: 362 SDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLMEL 541
SD D RKS SGY FT GGAVSW S KQ+ AD TTEAEY+AAS+A EA W+RKF+ EL
Sbjct: 281 SDVDDRKSISGYIFTCNGGAVSWKSSKQETTADFTTEAEYIAASDAEMEAVWIRKFVTEL 340
Query: 542 GVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVE 649
GVVP + + LY DN+GA+A +KEPR + +H+E
Sbjct: 341 GVVPSISSPVELYWDNTGAIAQAKEPRSHQKSKHIE 376
>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 896
Score = 289 bits (739), Expect = 9e-89
Identities = 135/219 (61%), Positives = 175/219 (79%), Gaps = 1/219 (0%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YIDK+L RF+MQNSK+GFLP HGI LSK+QCP T +ER+ MS IPY+SAIGS+MYAM+C
Sbjct: 628 YIDKVLNRFNMQNSKRGFLPMAHGINLSKNQCPTTTDERDKMSDIPYASAIGSIMYAMIC 687
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGG-EDLVPIGYTDSDF 358
TRPD+ +A+ + SRYQ+DP HWTAVK+I+KYL+RT+D LV+GG E+LV GYTD+ F
Sbjct: 688 TRPDVSYALSVTSRYQADPSEGHWTAVKNILKYLRRTKDVFLVYGGDEELVVNGYTDASF 747
Query: 359 MSDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLME 538
+D+D +S SG+ F L GGAVSW S KQ+ VADSTTEAEY+AASEA+KE W+R F+ E
Sbjct: 748 QTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTEAEYIAASEAAKEGVWIRNFITE 807
Query: 539 LGVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
LG+VP A+ + LYCDN+GA+A +KEPR + +H+ R+
Sbjct: 808 LGMVPSASSPMDLYCDNNGAIAQAKEPRSHQKSKHILRR 846
>emb|CAN83735.1| hypothetical protein VITISV_000740 [Vitis vinifera]
Length = 230
Score = 269 bits (687), Expect = 3e-88
Identities = 128/177 (72%), Positives = 150/177 (84%)
Frame = +2
Query: 125 MSRIPYSSAIGSLMYAMLCTRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHM 304
M R+PY+SA+GSLMYAMLCTRPDICFAVG+VSRYQS+PG D W AVKHI+KYL+RTR++M
Sbjct: 1 MRRVPYASAVGSLMYAMLCTRPDICFAVGVVSRYQSNPGLDQWVAVKHILKYLRRTRNYM 60
Query: 305 LVFGGEDLVPIGYTDSDFMSDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYV 484
LV+ G +L+PIGYTDSDF SD+DSRKSTS FTLGGGA+ W SVKQ CV DST EAEYV
Sbjct: 61 LVYSGRELIPIGYTDSDFQSDRDSRKSTSRAVFTLGGGAIIWRSVKQTCVVDSTMEAEYV 120
Query: 485 AASEASKEAAWLRKFLMELGVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
AA EA+KEA WLR+FL EL VVP+ + I LYCDNSGAVAN+KEPR + +H+ERK
Sbjct: 121 AACEAAKEAVWLREFLKELEVVPNMHEPIRLYCDNSGAVANAKEPRNHRKGKHIERK 177
>gb|KYP76577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 368
Score = 271 bits (694), Expect = 2e-87
Identities = 125/218 (57%), Positives = 167/218 (76%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YID IL R++M+NSK+G+ P G+ LS CPKT EER M+R+PY+SA+G++MY M C
Sbjct: 144 YIDTILRRYNMENSKRGYFPIGTGVTLSNEDCPKTLEERTRMNRVPYASAVGAIMYIMTC 203
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGGEDLVPIGYTDSDFM 361
TRPD+ FA G+VSRYQ++PG ++W VK I+KYL+RT+D L++GG +L+ GYTD+ F
Sbjct: 204 TRPDVAFAPGVVSRYQANPGEENWKVVKTILKYLRRTQDQFLIYGGTELMLKGYTDASFA 263
Query: 362 SDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLMEL 541
SD+D KS SGY FTL GGAVSW S KQ VADSTTEAEY+AAS+A+KEA W++KF+ EL
Sbjct: 264 SDKDDSKSISGYVFTLYGGAVSWKSSKQATVADSTTEAEYIAASDATKEAVWMKKFITEL 323
Query: 542 GVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
GVVP + I L C+N+GA+A +KEPR + +H+ R+
Sbjct: 324 GVVPSIEEPISLLCNNNGAIAQAKEPRSHQKSKHILRR 361
>gb|PKI46224.1| hypothetical protein CRG98_033396 [Punica granatum]
Length = 287
Score = 268 bits (686), Expect = 2e-87
Identities = 130/219 (59%), Positives = 168/219 (76%), Gaps = 1/219 (0%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YIDK+L RFSMQ+SKKG LP HGI LSK+Q P T EER+ ++RI Y+SAIGS+MYAMLC
Sbjct: 31 YIDKVLRRFSMQDSKKGSLPMLHGISLSKAQSPSTREERDRINRISYASAIGSIMYAMLC 90
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGG-EDLVPIGYTDSDF 358
TR D+ +A+ M SRY SDPG HW AVK+I+KYL+RT++ LV+GG E+L+ GYTD+ F
Sbjct: 91 TRSDVSYALSMTSRYHSDPGERHWIAVKNILKYLRRTKEMFLVYGGKEELIVRGYTDASF 150
Query: 359 MSDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLME 538
+D+D +S S Y F+L GAVSW S KQ+ VADSTTEAEY AAS A+KEA W++KF+ E
Sbjct: 151 QTDKDDSRSQSRYVFSLNEGAVSWKSSKQETVADSTTEAEYTAASNAAKEAVWIKKFVTE 210
Query: 539 LGVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
L VVP A + LYCDN+GA+A +KEP+ + +H+ R+
Sbjct: 211 LVVVPSIADPVDLYCDNNGAIAQAKEPKSHQRSKHILRR 249
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana]
emb|CAB80804.1| putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 286 bits (731), Expect = 4e-87
Identities = 135/219 (61%), Positives = 171/219 (78%), Gaps = 1/219 (0%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YIDK+L RF+M +SKKGF+P HGI LSK+QCP T +ERE MS+IPY+SAIGS+MYAML
Sbjct: 695 YIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLY 754
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGG-EDLVPIGYTDSDF 358
TRPD+ A+ M SRYQSDPG HW V++I KYL+RT+D LV+GG E+LV GYTD+ F
Sbjct: 755 TRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGSEELVVSGYTDASF 814
Query: 359 MSDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLME 538
+D+D +S SG+ F L GGAVSW S KQ VADSTTEAEY+AASEA+KE W+RKF+ E
Sbjct: 815 QTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITE 874
Query: 539 LGVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
LGVVP + I LYCDN+GA+A +KEP+ + +H++R+
Sbjct: 875 LGVVPSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRR 913
>gb|ABG22008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 283 bits (724), Expect = 2e-86
Identities = 134/219 (61%), Positives = 174/219 (79%), Gaps = 1/219 (0%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YIDK+L+RF+MQ+SKKGFLP HGI L K+QCP+T +ER MS IPY+SAIGS+MYAMLC
Sbjct: 672 YIDKVLKRFNMQDSKKGFLPLSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLC 731
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGG-EDLVPIGYTDSDF 358
TRPD+ +A+ S+YQSDPG HW AVK+I+KYL+RT+D L++GG E+LV YTD+ F
Sbjct: 732 TRPDVPYALSATSQYQSDPGESHWIAVKNILKYLRRTKDMFLIYGGQEELVVNNYTDASF 791
Query: 359 MSDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLME 538
+D+D +S SG+ F L GGAVSW S KQ VADSTTEAEY+AASEA+KEAAW++KF+ +
Sbjct: 792 QTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAAWIKKFVSQ 851
Query: 539 LGVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
LGV+ A+ + LYCDNSGA+A +KEPR + +H+ R+
Sbjct: 852 LGVMTSASSPMDLYCDNSGAIAQAKEPRSHRKSKHILRR 890
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 287 bits (735), Expect = 3e-86
Identities = 136/219 (62%), Positives = 172/219 (78%), Gaps = 1/219 (0%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YIDK+L+RF+M +SKKGFLP HGI LSK+QCP+T +ER M +PY+SAIGS+MYAMLC
Sbjct: 1048 YIDKVLKRFNMHDSKKGFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLC 1107
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGG-EDLVPIGYTDSDF 358
TRPD+ +A+ SRYQSDPG HWTAVK+I+KYL+RT+D LV+GG EDLV GYTD+ F
Sbjct: 1108 TRPDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLVYGGEEDLVVSGYTDASF 1167
Query: 359 MSDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLME 538
+D+D +S SG+ F L GGAVSW S KQ VADSTTEAEY+AASEA+KEA W++KF+ E
Sbjct: 1168 QTDKDDYRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAASEAAKEAVWIKKFVSE 1227
Query: 539 LGVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
LGV+ + LYCDNSGA+A +KEPR + +H+ R+
Sbjct: 1228 LGVMTSTTGPMSLYCDNSGAIAQAKEPRSHQKSKHILRR 1266
>gb|PNX89581.1| retrotransposon protein putative Ty1-copia sub-class [Trifolium
pratense]
Length = 201
Score = 261 bits (668), Expect = 7e-86
Identities = 123/198 (62%), Positives = 154/198 (77%), Gaps = 1/198 (0%)
Frame = +2
Query: 32 MQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLCTRPDICFAVG 211
M SKKGF+P +HG+ LSK+Q P T EER M++IPY+SAIGS+MYAMLCTRPD+ +A+
Sbjct: 1 MHESKKGFIPMQHGLYLSKTQSPSTKEERGRMNKIPYASAIGSIMYAMLCTRPDVSYALS 60
Query: 212 MVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGG-EDLVPIGYTDSDFMSDQDSRKST 388
SRYQS PG HW AVK+I+KYL+RT+D L++GG E+L IGYTD+ F +D+D KS
Sbjct: 61 ATSRYQSSPGDAHWVAVKNILKYLRRTKDSFLIYGGQEELAVIGYTDASFQTDKDDFKSQ 120
Query: 389 SGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLMELGVVPDAAKA 568
SGY F L GGAVSW S KQ+ VADSTTEAEY+AAS+A+KEA W++KF+ E G VP
Sbjct: 121 SGYVFCLNGGAVSWKSSKQETVADSTTEAEYIAASDAAKEAVWIKKFINEFGTVPSIVDP 180
Query: 569 IVLYCDNSGAVANSKEPR 622
I LYCDN+GA+A +KEPR
Sbjct: 181 IDLYCDNNGAIAQAKEPR 198
>gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gb|ABA92972.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 305
Score = 264 bits (674), Expect = 3e-85
Identities = 126/208 (60%), Positives = 162/208 (77%), Gaps = 1/208 (0%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YIDK+L+RF+MQ+SKKGFLP H I L K+QC +T +ER MS IPY+SAIGS+MYAMLC
Sbjct: 31 YIDKVLKRFNMQDSKKGFLPMSHDINLGKNQCSQTTDERNKMSVIPYASAIGSIMYAMLC 90
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGG-EDLVPIGYTDSDF 358
TRPD+ +A+ SRYQSDPG HW AVK+I+KYL RT+D LV+GG E+LV YTD+ F
Sbjct: 91 TRPDVSYALSATSRYQSDPGETHWIAVKNILKYLIRTKDMFLVYGGQEELVVNDYTDASF 150
Query: 359 MSDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLME 538
+D+D +S SG+ F L GGAVSW S KQ +A+STT+ EY+AASEA+KEA W++KF+ +
Sbjct: 151 QTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTLANSTTKTEYIAASEAAKEAVWIKKFVSQ 210
Query: 539 LGVVPDAAKAIVLYCDNSGAVANSKEPR 622
LGV+ + + LYCDNSGA+A +KEPR
Sbjct: 211 LGVMTSTSSPMDLYCDNSGAIAQAKEPR 238
>gb|PKU62438.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 402
Score = 265 bits (677), Expect = 2e-84
Identities = 127/218 (58%), Positives = 161/218 (73%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YI+KIL RF MQNSKKG +P HG+ LSK QCP+T + A+ SL+Y +LC
Sbjct: 144 YIEKILIRFEMQNSKKGNMPSCHGVYLSKKQCPQTKQ------------AVDSLIYVILC 191
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGGEDLVPIGYTDSDFM 361
TRPDIC+ VG+VSRYQS+PG HW AVKHI KYLKRT+++MLV+ G DL+P GYTD+DF
Sbjct: 192 TRPDICYVVGIVSRYQSNPGRFHWVAVKHIFKYLKRTKENMLVYSGSDLIPKGYTDADFQ 251
Query: 362 SDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLMEL 541
SD D KSTS F LGGGA+ W S+KQ C++DST +AEYV A+EA+KEA WLR F +EL
Sbjct: 252 SDIDESKSTSDSIFILGGGAIVWRSIKQSCISDSTMKAEYVVATEAAKEAVWLRNFQIEL 311
Query: 542 GVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
VVP+ K + L+CDNS A++N+KE R K +H++RK
Sbjct: 312 KVVPNFEKPLTLFCDNSEAISNTKEVRNHKKAKHIDRK 349
>gb|PKA64902.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 282
Score = 260 bits (665), Expect = 3e-84
Identities = 128/218 (58%), Positives = 161/218 (73%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
YIDK+L +F+ QNSKKG LP R+GI LSK QCPK + + SL+YA+LC
Sbjct: 31 YIDKVLVKFATQNSKKGNLPSRNGIHLSKMQCPKNHK------------TVVSLIYALLC 78
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGGEDLVPIGYTDSDFM 361
TRPDICF VG+VSRYQS+P +HW AVK+I+KYL+R R++MLV+ G DL+PIGYTDSDF
Sbjct: 79 TRPDICFVVGVVSRYQSNPELNHWVAVKYILKYLRRIRNYMLVYFGGDLIPIGYTDSDFQ 138
Query: 362 SDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLMEL 541
D+DSR+ TSG F LGGGA+ W S+KQ C+ DST +AEY A EA+KE+ WL +FL +L
Sbjct: 139 LDRDSRELTSGTVFILGGGAIIWRSIKQSCITDSTMKAEYAVAYEAAKESIWLCEFLRDL 198
Query: 542 GVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVERK 655
V+PD K I LYCDNSGA+AN KE R + +H+ERK
Sbjct: 199 EVIPDMHKPIRLYCDNSGAMANVKESRNHRKGKHIERK 236
>gb|PPY93112.1| hypothetical protein C5P31_25365, partial [Escherichia coli]
Length = 813
Score = 275 bits (702), Expect = 6e-84
Identities = 134/217 (61%), Positives = 168/217 (77%)
Frame = +2
Query: 2 YIDKILERFSMQNSKKGFLPFRHGIPLSKSQCPKTPEEREIMSRIPYSSAIGSLMYAMLC 181
Y++K+L+RF+M +SK+G L RHGI LSK PKTPEER+ M+RIPY+SAIGSLMYAMLC
Sbjct: 558 YLEKVLKRFNMLDSKRGLLLVRHGIHLSKEMSPKTPEERDKMARIPYASAIGSLMYAMLC 617
Query: 182 TRPDICFAVGMVSRYQSDPGPDHWTAVKHIIKYLKRTRDHMLVFGGEDLVPIGYTDSDFM 361
TRPDI +A+ + SRYQS+PG +H AVK+I+KYL+RT+D L++GG DL GYTDSDF
Sbjct: 618 TRPDIAYAISLTSRYQSNPGLEHSIAVKNILKYLRRTKDLFLIYGGGDLQLDGYTDSDFQ 677
Query: 362 SDQDSRKSTSGYAFTLGGGAVSWMSVKQKCVADSTTEAEYVAASEASKEAAWLRKFLMEL 541
SD D RKSTSGY F GGAVSW S KQ ADSTTEAEY+AAS+A+KEA W++KF++EL
Sbjct: 678 SDIDDRKSTSGYVFICNGGAVSWKSSKQSTTADSTTEAEYIAASDAAKEAIWIKKFVIEL 737
Query: 542 GVVPDAAKAIVLYCDNSGAVANSKEPRYTKGLRHVER 652
VVP A+ L+ DN+GAV +KE R +H+ER
Sbjct: 738 TVVPSIESAVPLHYDNNGAVIQAKELRSHPKSKHIER 774