BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00023129
         (1836 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020261495.1| DNA repair protein recA homolog 3, mitochond...   555   0.0  
ref|XP_020104766.1| DNA repair protein recA homolog 3, mitochond...   519   e-178
ref|XP_010909692.1| PREDICTED: DNA repair protein recA homolog 3...   508   e-173
ref|XP_010250454.1| PREDICTED: DNA repair protein recA homolog 3...   508   e-173
gb|OVA09719.1| AAA+ ATPase domain [Macleaya cordata]                  504   e-172
gb|OAY73885.1| DNA repair protein recA, mitochondrial [Ananas co...   499   e-170
gb|PPD86045.1| hypothetical protein GOBAR_DD17000 [Gossypium bar...   496   e-169
ref|XP_012464696.1| PREDICTED: DNA repair protein recA homolog 3...   496   e-168
ref|XP_017620047.1| PREDICTED: DNA repair protein recA homolog 3...   494   e-168
ref|XP_016719532.1| PREDICTED: DNA repair protein recA homolog 3...   494   e-168
gb|KJB83056.1| hypothetical protein B456_013G227300 [Gossypium r...   494   e-168
ref|XP_017983961.1| PREDICTED: DNA repair protein recA homolog 3...   493   e-167
gb|EOY30426.1| RecA DNA recombination family protein [Theobroma ...   493   e-167
gb|PPS06538.1| hypothetical protein GOBAR_AA14085 [Gossypium bar...   490   e-166
ref|XP_021275835.1| DNA repair protein recA homolog 3, mitochond...   489   e-166
ref|XP_017237624.1| PREDICTED: DNA repair protein recA homolog 3...   489   e-166
ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3...   489   e-166
ref|XP_004970942.1| DNA repair protein recA homolog 3, mitochond...   489   e-166
ref|XP_011077996.1| DNA repair protein recA homolog 3, mitochond...   488   e-165
ref|XP_017218404.1| PREDICTED: DNA repair protein recA homolog 3...   486   e-165

>ref|XP_020261495.1| DNA repair protein recA homolog 3, mitochondrial [Asparagus
            officinalis]
 gb|ONK72439.1| uncharacterized protein A4U43_C04F19440 [Asparagus officinalis]
          Length = 419

 Score =  555 bits (1430), Expect = 0.0
 Identities = 289/382 (75%), Positives = 315/382 (82%), Gaps = 7/382 (1%)
 Frame = +3

Query: 3    CRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMW 182
            CRQGI+GS S  RNFSAK ++            N+SKKDVALHQALDQIQASFGKGAIMW
Sbjct: 20   CRQGIVGSASHARNFSAKGRKKSKSDGSESGEENLSKKDVALHQALDQIQASFGKGAIMW 79

Query: 183  LGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNG 362
            LGRSN PREVPVISTGSF+LDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAE+QKNG
Sbjct: 80   LGRSNVPREVPVISTGSFSLDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAESQKNG 139

Query: 363  GYCAFVDAEHALDPALAESIGVKTENLLLSXXXXXXXXXXXXXXXXX-------VVDSVA 521
            GYCAFVDAEHALDPALAESIGVKT++LLLS                        VVDSVA
Sbjct: 140  GYCAFVDAEHALDPALAESIGVKTDDLLLSQPDCGEQALSLVDTLIRSGSIDVVVVDSVA 199

Query: 522  ALVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTFGFGGP 701
            ALVPKSELEGEMGDAHMALQARLMSQALRKLSHSLS+SQTIL+FINQVRSKLQTFGFGGP
Sbjct: 200  ALVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSLSQTILVFINQVRSKLQTFGFGGP 259

Query: 702  TEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFG 881
            TEVTSGGNALKFYSSVRLNIKRIG VKKGEET+GSQ+LVK+VKNKHAPPFKTAQFELEFG
Sbjct: 260  TEVTSGGNALKFYSSVRLNIKRIGLVKKGEETVGSQVLVKIVKNKHAPPFKTAQFELEFG 319

Query: 882  KGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXXX 1061
            KGI+R+SEII+LGCKHKFI+RSGA+Y+ N +TF GK+A+KRYFAE+              
Sbjct: 320  KGISRDSEIIELGCKHKFITRSGAFYTLNGQTFRGKEAIKRYFAENREAQEELTMKLREK 379

Query: 1062 XIRSEIEKKHDSETEAPDGDVQ 1127
             I +E +KK  SE+E P  DVQ
Sbjct: 380  LIHTETQKKSSSESEVPGEDVQ 401


>ref|XP_020104766.1| DNA repair protein recA homolog 3, mitochondrial isoform X1 [Ananas
            comosus]
          Length = 421

 Score =  519 bits (1337), Expect = e-178
 Identities = 273/379 (72%), Positives = 308/379 (81%), Gaps = 9/379 (2%)
 Frame = +3

Query: 6    RQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMWL 185
            RQGI GS+  FR+FS K +R            N+SKKD+ALHQALDQI ASFGKGAIMWL
Sbjct: 21   RQGICGSSFHFRSFSTKGRRKSRSDGTDSCEENLSKKDLALHQALDQITASFGKGAIMWL 80

Query: 186  GRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNGG 365
            GRS+ PREVPV+STGSFALD+ALGIGGLPKGRVVE+YGPEASGKTTLALHVIAEAQK GG
Sbjct: 81   GRSHGPREVPVVSTGSFALDMALGIGGLPKGRVVEVYGPEASGKTTLALHVIAEAQKYGG 140

Query: 366  YCAFVDAEHALDPALAESIGVKTENLLLS-------XXXXXXXXXXXXXXXXXVVDSVAA 524
            YCAFVDAEHALDPALAESIGVKT+NLLLS                        VVDSVAA
Sbjct: 141  YCAFVDAEHALDPALAESIGVKTDNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAA 200

Query: 525  LVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTF-GFGGP 701
            LVPKSEL+GEMGDAH+ALQARLMSQALRKLSHSLS+SQTILLFINQVRSK+ TF GFGGP
Sbjct: 201  LVPKSELDGEMGDAHVALQARLMSQALRKLSHSLSLSQTILLFINQVRSKVSTFGGFGGP 260

Query: 702  TEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFG 881
            TEVTSGGNALKFY+SVRLNIKRIG VKKGEET+GSQ+LVK+VKNKHAPPFKTAQFELEFG
Sbjct: 261  TEVTSGGNALKFYASVRLNIKRIGLVKKGEETVGSQVLVKIVKNKHAPPFKTAQFELEFG 320

Query: 882  KGIARESEIIDLGCKHKFISRS-GAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXX 1058
            KGI R+SEIIDLG K+KFI+++ GA+Y+FN ++F GKDA+KRYFAE+             
Sbjct: 321  KGICRDSEIIDLGLKNKFITKAGGAFYNFNGQSFRGKDAIKRYFAENEGVRDEVMTKLKE 380

Query: 1059 XXIRSEIEKKHDSETEAPD 1115
              ++++ EKKHDS +E  +
Sbjct: 381  KLMQNDTEKKHDSGSETAE 399


>ref|XP_010909692.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial isoform
            X1 [Elaeis guineensis]
          Length = 417

 Score =  508 bits (1308), Expect = e-173
 Identities = 269/381 (70%), Positives = 302/381 (79%), Gaps = 9/381 (2%)
 Frame = +3

Query: 6    RQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMWL 185
            RQG +GS  QF NFSA  +R            ++SKKDVAL QALDQI ASFGKGAIMWL
Sbjct: 17   RQGFVGSTFQFCNFSAGGRRKSKSDGSESSEESLSKKDVALQQALDQITASFGKGAIMWL 76

Query: 186  GRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNGG 365
            GRS++ REVPV+STGSF+LD+ALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQK GG
Sbjct: 77   GRSHSRREVPVVSTGSFSLDLALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKAGG 136

Query: 366  YCAFVDAEHALDPALAESIGVKTENLLLS-------XXXXXXXXXXXXXXXXXVVDSVAA 524
            YCAFVDAEHALDP+LAE+IGVKT+NLLLS                        VVDSVAA
Sbjct: 137  YCAFVDAEHALDPSLAETIGVKTDNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAA 196

Query: 525  LVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTF-GFGGP 701
            LVPKSEL+GEMGDAHMALQARLMSQALRKLSHSLS+SQTIL+FINQVRSKL TF GFGGP
Sbjct: 197  LVPKSELDGEMGDAHMALQARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGGFGGP 256

Query: 702  TEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFG 881
            TEVTSGGNALKFY+SVRLNIKRIG VKKGEET+GSQ+LVK+VKNKHAPPFKT QFELEFG
Sbjct: 257  TEVTSGGNALKFYASVRLNIKRIGLVKKGEETVGSQVLVKIVKNKHAPPFKTVQFELEFG 316

Query: 882  KGIARESEIIDLGCKHKFISR-SGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXX 1058
            KGI+R+SE+I+LGCKHKFI++  GA+YS N  +F GKDA+KRYF E+             
Sbjct: 317  KGISRDSEVIELGCKHKFITKGGGAFYSLNGHSFRGKDAIKRYFVENEGAREELMMKLKE 376

Query: 1059 XXIRSEIEKKHDSETEAPDGD 1121
              +    EKK + E++ PDGD
Sbjct: 377  KILHG-TEKKQEPESQVPDGD 396


>ref|XP_010250454.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial [Nelumbo
            nucifera]
          Length = 425

 Score =  508 bits (1307), Expect = e-173
 Identities = 269/381 (70%), Positives = 300/381 (78%), Gaps = 9/381 (2%)
 Frame = +3

Query: 6    RQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMWL 185
            RQGILG +SQ  NFS+K KR            N+SKKD+AL QALDQI  SFGKGAIMWL
Sbjct: 24   RQGILGISSQCCNFSSKGKRKSRSDGSDSGEENISKKDLALQQALDQITTSFGKGAIMWL 83

Query: 186  GRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNGG 365
            GRS +PR VPV+STGSFALD+ALGIGGLPKGRV+EIYGPEASGKTTLALHVIAE+QK+GG
Sbjct: 84   GRSVSPRHVPVVSTGSFALDMALGIGGLPKGRVIEIYGPEASGKTTLALHVIAESQKHGG 143

Query: 366  YCAFVDAEHALDPALAESIGVKTENLLLS-------XXXXXXXXXXXXXXXXXVVDSVAA 524
            YC FVDAEHALDPALAE++GVKTENLLLS                        VVDSVAA
Sbjct: 144  YCVFVDAEHALDPALAEAVGVKTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAA 203

Query: 525  LVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTF-GFGGP 701
            LVPKSEL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQTIL+FINQVRSKL TF GFGGP
Sbjct: 204  LVPKSELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGGFGGP 263

Query: 702  TEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFG 881
             EVTSGGNALKFY+SVRLNIKR G VKKGEETIGSQ+LVK+VKNKHAPPFKTAQFELEFG
Sbjct: 264  IEVTSGGNALKFYASVRLNIKRTGLVKKGEETIGSQVLVKIVKNKHAPPFKTAQFELEFG 323

Query: 882  KGIARESEIIDLGCKHKFISRS-GAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXX 1058
            KGI R SEII+LGCKHKFI+++ GA+Y+FN + F GKDA+KRY +E+             
Sbjct: 324  KGICRYSEIIELGCKHKFITKAGGAFYNFNGQNFRGKDAIKRYLSENEDCLEELMAKLRE 383

Query: 1059 XXIRSEIEKKHDSETEAPDGD 1121
              +  E   + DSET  PDGD
Sbjct: 384  KLMHIETNIEKDSETGTPDGD 404


>gb|OVA09719.1| AAA+ ATPase domain [Macleaya cordata]
          Length = 422

 Score =  504 bits (1298), Expect = e-172
 Identities = 266/380 (70%), Positives = 301/380 (79%), Gaps = 10/380 (2%)
 Frame = +3

Query: 6    RQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMWL 185
            RQGIL +++QF NFS+K KR            N+SKKD+AL QALDQI  SFGKGAIMWL
Sbjct: 22   RQGILRTSTQFCNFSSKGKRKSKSDGSESGEENLSKKDLALQQALDQITTSFGKGAIMWL 81

Query: 186  GRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNGG 365
            GR+ +PR +PV+STGSFALD+ALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQK+GG
Sbjct: 82   GRTASPRHIPVVSTGSFALDMALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKHGG 141

Query: 366  YCAFVDAEHALDPALAESIGVKTENLLLS-------XXXXXXXXXXXXXXXXXVVDSVAA 524
            YC FVDAEHALDPALAE+IGV TENLLLS                        VVDSVAA
Sbjct: 142  YCVFVDAEHALDPALAEAIGVNTENLLLSQPDSGEQALSLVDTLIRSGSVNVVVVDSVAA 201

Query: 525  LVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTF-GFGGP 701
            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQTIL+FINQVRSKL TF GFGGP
Sbjct: 202  LVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGGFGGP 261

Query: 702  TEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFG 881
             EVTSGGNALKFY+SVRLNIKRIG VKKGEET+GSQ+LVK+VKNKHAPPFKTAQFELEFG
Sbjct: 262  QEVTSGGNALKFYASVRLNIKRIGLVKKGEETVGSQVLVKIVKNKHAPPFKTAQFELEFG 321

Query: 882  KGIARESEIIDLGCKHKFISR-SGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXX 1058
            KGI RESE+I+LGCKHKFI++  GA+YSFND++F GKDA+K+Y A++             
Sbjct: 322  KGICRESELIELGCKHKFITKLGGAFYSFNDQSFRGKDAIKKYLAQNVDIREELMGKLRE 381

Query: 1059 XXIRSEIEK-KHDSETEAPD 1115
                +E +K K  SET+  D
Sbjct: 382  KLTHTETDKAKESSETQEED 401


>gb|OAY73885.1| DNA repair protein recA, mitochondrial [Ananas comosus]
          Length = 397

 Score =  499 bits (1285), Expect = e-170
 Identities = 263/367 (71%), Positives = 296/367 (80%), Gaps = 9/367 (2%)
 Frame = +3

Query: 42   NFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMWLGRSNAPREVPVI 221
            N S   +R            N+SKKD+ALHQALDQI ASFGKGAIMWLGRS+ PREVPV+
Sbjct: 9    NLSLLGRRKSRSDGTDSCEENLSKKDLALHQALDQITASFGKGAIMWLGRSHGPREVPVV 68

Query: 222  STGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNGGYCAFVDAEHALD 401
            STGSFALD+ALGIGGLPKGRVVE+YGPEASGKTTLALHVIAEAQK GGYCAFVDAEHALD
Sbjct: 69   STGSFALDMALGIGGLPKGRVVEVYGPEASGKTTLALHVIAEAQKYGGYCAFVDAEHALD 128

Query: 402  PALAESIGVKTENLLLS-------XXXXXXXXXXXXXXXXXVVDSVAALVPKSELEGEMG 560
            P LAESIGVKT+NLLLS                        VVDSVAALVPKSEL+GEMG
Sbjct: 129  PTLAESIGVKTDNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGEMG 188

Query: 561  DAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTF-GFGGPTEVTSGGNALKF 737
            DAH+ALQARLMSQALRKLSHSLS+SQTILLFINQVRSK+ TF GFGGPTEVTSGGNALKF
Sbjct: 189  DAHVALQARLMSQALRKLSHSLSLSQTILLFINQVRSKVSTFGGFGGPTEVTSGGNALKF 248

Query: 738  YSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFGKGIARESEIIDL 917
            Y+SVRLNIKRIG VKKGEET+GSQ+LVK+VKNKHAPPFKTAQFELEFGKGI R+SEIIDL
Sbjct: 249  YASVRLNIKRIGLVKKGEETVGSQVLVKIVKNKHAPPFKTAQFELEFGKGICRDSEIIDL 308

Query: 918  GCKHKFISRS-GAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXXXXIRSEIEKKHD 1094
            G K+KFI+++ GA+Y+FN ++F GKDA+KRYFAE+               ++++ EKKHD
Sbjct: 309  GLKNKFITKAGGAFYNFNGQSFRGKDAIKRYFAENEGVRDEVMTKLKEKLMQNDTEKKHD 368

Query: 1095 SETEAPD 1115
            S +E  +
Sbjct: 369  SGSETAE 375


>gb|PPD86045.1| hypothetical protein GOBAR_DD17000 [Gossypium barbadense]
          Length = 402

 Score =  496 bits (1276), Expect = e-169
 Identities = 255/373 (68%), Positives = 291/373 (78%)
 Frame = +3

Query: 3    CRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMW 182
            CR G+LGS SQ  NFS+K KR            NMSKKD+AL QALDQI +SFGKG+IMW
Sbjct: 21   CRGGVLGSYSQLCNFSSKGKRKSKSDGSDSGEENMSKKDLALKQALDQITSSFGKGSIMW 80

Query: 183  LGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNG 362
            LGRS +PR VPV+STGSFALD+ALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQK G
Sbjct: 81   LGRSESPRNVPVVSTGSFALDVALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQG 140

Query: 363  GYCAFVDAEHALDPALAESIGVKTENLLLSXXXXXXXXXXXXXXXXXVVDSVAALVPKSE 542
            GYC FVDAEHALDPALAE+IGV TENLLLS                  +  VAALVPK E
Sbjct: 141  GYCVFVDAEHALDPALAETIGVNTENLLLSQPDCGEQ----------ALSLVAALVPKGE 190

Query: 543  LEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTFGFGGPTEVTSGG 722
            L+GEMGDAHMA+QARLMSQALRKLSHSLS+SQTIL+FINQVRSKL TFGFGGPTEVT GG
Sbjct: 191  LDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGFGGPTEVTCGG 250

Query: 723  NALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFGKGIARES 902
            NALKFY+SVRLNI+R G VKKGEETIGSQ+LVKVVKNKHAPPFKTA+FELEFGKGI RE 
Sbjct: 251  NALKFYASVRLNIRRTGLVKKGEETIGSQVLVKVVKNKHAPPFKTAEFELEFGKGICREG 310

Query: 903  EIIDLGCKHKFISRSGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXXXXIRSEIE 1082
            EII+L  KHKF++++G++Y+FND+  HGK+A K +  ++               +  E+E
Sbjct: 311  EIINLATKHKFVTKAGSFYTFNDQKIHGKEAFKNFLVQNESEREELATKLREKLL--EVE 368

Query: 1083 KKHDSETEAPDGD 1121
             K + + +  DGD
Sbjct: 369  NKKERQGDISDGD 381


>ref|XP_012464696.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Gossypium raimondii]
 gb|KJB83055.1| hypothetical protein B456_013G227300 [Gossypium raimondii]
          Length = 419

 Score =  496 bits (1276), Expect = e-168
 Identities = 256/380 (67%), Positives = 293/380 (77%), Gaps = 7/380 (1%)
 Frame = +3

Query: 3    CRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMW 182
            CR G+LGS SQ  NFS+K +R            NMSKKD+AL QALDQI +SFGKG+IMW
Sbjct: 21   CRGGVLGSYSQLCNFSSKGRRKSKSDGSDSGEENMSKKDLALKQALDQITSSFGKGSIMW 80

Query: 183  LGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNG 362
            LGRS +PR VPV+STGSFALD+ALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQK G
Sbjct: 81   LGRSESPRNVPVVSTGSFALDVALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQG 140

Query: 363  GYCAFVDAEHALDPALAESIGVKTENLLLSXXXXXXXXXXXXXXXXX-------VVDSVA 521
            GYC FVDAEHALDPALAE+IGV TENLLLS                        VVDSVA
Sbjct: 141  GYCVFVDAEHALDPALAETIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVA 200

Query: 522  ALVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTFGFGGP 701
            ALVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQTIL+FINQVRSKL TFGFGGP
Sbjct: 201  ALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGFGGP 260

Query: 702  TEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFG 881
            TEVT GGNALKFY+SVRLNI+R G VKKGEETIGSQ+LVKVVKNKHAPPFK A+FELEFG
Sbjct: 261  TEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLVKVVKNKHAPPFKNAEFELEFG 320

Query: 882  KGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXXX 1061
            KGI RE EII+L  KHKF++++G++Y+FND+  HGK+A K +  ++              
Sbjct: 321  KGICREGEIINLATKHKFVTKAGSFYTFNDQKIHGKEAFKNFLVQNESAREELATKLREK 380

Query: 1062 XIRSEIEKKHDSETEAPDGD 1121
             +  E+E + + + +  DGD
Sbjct: 381  LL--EVENEKERQGDISDGD 398


>ref|XP_017620047.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            isoform X1 [Gossypium arboreum]
 ref|XP_017620048.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            isoform X2 [Gossypium arboreum]
 gb|KHG09097.1| hypothetical protein F383_14543 [Gossypium arboreum]
          Length = 419

 Score =  494 bits (1273), Expect = e-168
 Identities = 257/380 (67%), Positives = 292/380 (76%), Gaps = 7/380 (1%)
 Frame = +3

Query: 3    CRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMW 182
            CR G+LGS SQ  NFS+K +R            N+SKKD+AL QALDQI +SFGKG+IMW
Sbjct: 21   CRGGVLGSYSQLCNFSSKGRRKSKSDGSDSGEENISKKDLALKQALDQITSSFGKGSIMW 80

Query: 183  LGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNG 362
            LGRS +PR VPV+STGSFALD+ALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQK G
Sbjct: 81   LGRSESPRNVPVVSTGSFALDVALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQG 140

Query: 363  GYCAFVDAEHALDPALAESIGVKTENLLLSXXXXXXXXXXXXXXXXX-------VVDSVA 521
            GYC FVDAEHALDPALAE+IGV TENLLLS                        VVDSVA
Sbjct: 141  GYCVFVDAEHALDPALAETIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVA 200

Query: 522  ALVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTFGFGGP 701
            ALVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQTIL+FINQVRSKL TFGFGGP
Sbjct: 201  ALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGFGGP 260

Query: 702  TEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFG 881
            TEVT GGNALKFY+SVRLNI+R G VKKGEETIGSQ+LVKVVKNKHAPPFK A+FELEFG
Sbjct: 261  TEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLVKVVKNKHAPPFKNAEFELEFG 320

Query: 882  KGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXXX 1061
            KGI RE EII+L  KHKF++++G++Y+FND+  HGK+A K +  E+              
Sbjct: 321  KGICREGEIINLATKHKFVTKAGSFYTFNDQKIHGKEAFKNFLVENESAREELATKLREK 380

Query: 1062 XIRSEIEKKHDSETEAPDGD 1121
             +  E E K + + +  DGD
Sbjct: 381  LL--EPENKKERQGDISDGD 398


>ref|XP_016719532.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Gossypium hirsutum]
          Length = 419

 Score =  494 bits (1272), Expect = e-168
 Identities = 255/380 (67%), Positives = 292/380 (76%), Gaps = 7/380 (1%)
 Frame = +3

Query: 3    CRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMW 182
            CR G+LGS SQ  NFS+K +R            NMSKKD+AL QALDQI +SFGKG+IMW
Sbjct: 21   CRGGVLGSYSQLCNFSSKGRRKSKSDGSDSGEENMSKKDLALKQALDQITSSFGKGSIMW 80

Query: 183  LGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNG 362
            LGRS +PR VPV+STGSFALD+ALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQK G
Sbjct: 81   LGRSESPRNVPVVSTGSFALDVALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQG 140

Query: 363  GYCAFVDAEHALDPALAESIGVKTENLLLSXXXXXXXXXXXXXXXXX-------VVDSVA 521
            GYC FVDAEHALDPALAE+IGV TENLLLS                        VVDSVA
Sbjct: 141  GYCVFVDAEHALDPALAETIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVA 200

Query: 522  ALVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTFGFGGP 701
            ALVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQTIL+FINQ RSKL TFGFGGP
Sbjct: 201  ALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQARSKLSTFGFGGP 260

Query: 702  TEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFG 881
            TEVT GGNALKFY+SVRLNI+R G VKKGEETIGSQ+LVKVVKNKHAPPFK A+FELEFG
Sbjct: 261  TEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLVKVVKNKHAPPFKNAEFELEFG 320

Query: 882  KGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXXX 1061
            KGI RE EII+L  KHKF++++G++Y+FND+  HGK+A K +  ++              
Sbjct: 321  KGICREGEIINLATKHKFVTKAGSFYTFNDQKIHGKEAFKNFLVQNESAREELATKLREK 380

Query: 1062 XIRSEIEKKHDSETEAPDGD 1121
             +  E+E + + + +  DGD
Sbjct: 381  LL--EVENEKERQGDISDGD 398


>gb|KJB83056.1| hypothetical protein B456_013G227300 [Gossypium raimondii]
          Length = 419

 Score =  494 bits (1272), Expect = e-168
 Identities = 255/380 (67%), Positives = 292/380 (76%), Gaps = 7/380 (1%)
 Frame = +3

Query: 3    CRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMW 182
            CR G+LGS SQ  NFS+K +R            NMSKKD+AL QALDQI +SFGKG+IMW
Sbjct: 21   CRGGVLGSYSQLCNFSSKGRRKSKSDGSDSGEENMSKKDLALKQALDQITSSFGKGSIMW 80

Query: 183  LGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNG 362
            LGRS +PR VPV+STGSFALD+ALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQK G
Sbjct: 81   LGRSESPRNVPVVSTGSFALDVALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQG 140

Query: 363  GYCAFVDAEHALDPALAESIGVKTENLLLSXXXXXXXXXXXXXXXXX-------VVDSVA 521
            GYC FVDAEHALDPALAE+IGV TENLLLS                        VVDSV 
Sbjct: 141  GYCVFVDAEHALDPALAETIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVT 200

Query: 522  ALVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTFGFGGP 701
            ALVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQTIL+FINQVRSKL TFGFGGP
Sbjct: 201  ALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGFGGP 260

Query: 702  TEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFG 881
            TEVT GGNALKFY+SVRLNI+R G VKKGEETIGSQ+LVKVVKNKHAPPFK A+FELEFG
Sbjct: 261  TEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLVKVVKNKHAPPFKNAEFELEFG 320

Query: 882  KGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXXX 1061
            KGI RE EII+L  KHKF++++G++Y+FND+  HGK+A K +  ++              
Sbjct: 321  KGICREGEIINLATKHKFVTKAGSFYTFNDQKIHGKEAFKNFLVQNESAREELATKLREK 380

Query: 1062 XIRSEIEKKHDSETEAPDGD 1121
             +  E+E + + + +  DGD
Sbjct: 381  LL--EVENEKERQGDISDGD 398


>ref|XP_017983961.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial
            [Theobroma cacao]
          Length = 420

 Score =  493 bits (1269), Expect = e-167
 Identities = 258/381 (67%), Positives = 298/381 (78%), Gaps = 8/381 (2%)
 Frame = +3

Query: 3    CRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMW 182
            CR+G+LGS+SQ  +FS+K +R            NMSKK++AL QALDQI +SFGKG+IMW
Sbjct: 21   CRRGVLGSSSQLCSFSSKGRRKSKSDGSDSCDENMSKKELALKQALDQITSSFGKGSIMW 80

Query: 183  LGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNG 362
            LGRS +P++VPV+STGSFALDIALG GGLPKGRVVEIYGPEASGKTTLALHVIAEAQK G
Sbjct: 81   LGRSVSPKDVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQG 140

Query: 363  GYCAFVDAEHALDPALAESIGVKTENLLLS-------XXXXXXXXXXXXXXXXXVVDSVA 521
            GYC FVDAEHALD ALAE+IGV TENLLLS                        VVDSVA
Sbjct: 141  GYCVFVDAEHALDSALAEAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVA 200

Query: 522  ALVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTF-GFGG 698
            ALVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQTIL+F+NQVRSKL TF GFGG
Sbjct: 201  ALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFVNQVRSKLSTFGGFGG 260

Query: 699  PTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEF 878
            PTEVT GGNALKFY+SVRLNI+R G VKKGEETIGSQ+LVK+VKNK APPFKTAQFELEF
Sbjct: 261  PTEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLVKIVKNKLAPPFKTAQFELEF 320

Query: 879  GKGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXX 1058
            G+GI+RE EIIDL  KHKF+++SGA+YSFND+  HGK+A K++ AE+             
Sbjct: 321  GRGISREGEIIDLALKHKFVTKSGAFYSFNDKKIHGKEAFKKFLAENESACEELVMKLRE 380

Query: 1059 XXIRSEIEKKHDSETEAPDGD 1121
              +  E E+K + +T+  DGD
Sbjct: 381  KLL--EAERKKERQTDISDGD 399


>gb|EOY30426.1| RecA DNA recombination family protein [Theobroma cacao]
          Length = 420

 Score =  493 bits (1269), Expect = e-167
 Identities = 258/381 (67%), Positives = 298/381 (78%), Gaps = 8/381 (2%)
 Frame = +3

Query: 3    CRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMW 182
            CR+G+LGS+SQ  +FS+K +R            NMSKK++AL QALDQI +SFGKG+IMW
Sbjct: 21   CRRGVLGSSSQLCSFSSKGRRKSKSDGSDSCDENMSKKELALKQALDQITSSFGKGSIMW 80

Query: 183  LGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNG 362
            LGRS +P++VPV+STGSFALDIALG GGLPKGRVVEIYGPEASGKTTLALHVIAEAQK G
Sbjct: 81   LGRSVSPKDVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQG 140

Query: 363  GYCAFVDAEHALDPALAESIGVKTENLLLS-------XXXXXXXXXXXXXXXXXVVDSVA 521
            GYC FVDAEHALD ALAE+IGV TENLLLS                        VVDSVA
Sbjct: 141  GYCVFVDAEHALDSALAEAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVA 200

Query: 522  ALVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTF-GFGG 698
            ALVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQTIL+F+NQVRSKL TF GFGG
Sbjct: 201  ALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFVNQVRSKLSTFGGFGG 260

Query: 699  PTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEF 878
            PTEVT GGNALKFY+SVRLNI+R G VKKGEETIGSQ+LVK+VKNK APPFKTAQFELEF
Sbjct: 261  PTEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLVKIVKNKLAPPFKTAQFELEF 320

Query: 879  GKGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXX 1058
            G+GI+RE EIIDL  KHKF+++SGA+YSFND+  HGK+A K++ AE+             
Sbjct: 321  GRGISREGEIIDLALKHKFVTKSGAFYSFNDKKIHGKEAFKKFLAENESACEELVMKLRE 380

Query: 1059 XXIRSEIEKKHDSETEAPDGD 1121
              +  E E+K + +T+  DGD
Sbjct: 381  KLL--EAERKKERQTDISDGD 399


>gb|PPS06538.1| hypothetical protein GOBAR_AA14085 [Gossypium barbadense]
          Length = 402

 Score =  490 bits (1261), Expect = e-166
 Identities = 253/373 (67%), Positives = 289/373 (77%)
 Frame = +3

Query: 3    CRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMW 182
            CR G+LGS SQ  NFS+K +R            N+SKKD+AL QALDQI +SFGKG+IMW
Sbjct: 21   CRGGVLGSYSQLCNFSSKGRRKSKSDGSDSGEENISKKDLALKQALDQITSSFGKGSIMW 80

Query: 183  LGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNG 362
            LGRS +PR VPV+STGSFALD+ALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQK G
Sbjct: 81   LGRSESPRNVPVVSTGSFALDVALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQG 140

Query: 363  GYCAFVDAEHALDPALAESIGVKTENLLLSXXXXXXXXXXXXXXXXXVVDSVAALVPKSE 542
            GYC FVDAEHALDPALAE+IGV TENLLLS                  +  VAALVPK E
Sbjct: 141  GYCVFVDAEHALDPALAETIGVNTENLLLSQPDCGEQ----------ALSLVAALVPKGE 190

Query: 543  LEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTFGFGGPTEVTSGG 722
            L+GEMGDAHMA+QARLMSQALRKLSHSLS+SQTIL+FINQVRSKL TFGFGGPTEVT GG
Sbjct: 191  LDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRSKLSTFGFGGPTEVTCGG 250

Query: 723  NALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFGKGIARES 902
            NALKFY+SVRLNI+R G VKKGEETIGSQ+LVKVVKNKHAPPFK A+FELEFGKGI RE 
Sbjct: 251  NALKFYASVRLNIRRTGLVKKGEETIGSQVLVKVVKNKHAPPFKNAEFELEFGKGICREG 310

Query: 903  EIIDLGCKHKFISRSGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXXXXIRSEIE 1082
            EII+L  KHKF++++G++Y+FND+  HGK+A K +  E+               +  E E
Sbjct: 311  EIINLATKHKFVTKAGSFYTFNDQKIHGKEAFKNFLVENESAREELATKLREKLL--EPE 368

Query: 1083 KKHDSETEAPDGD 1121
             K + + +  DGD
Sbjct: 369  NKKERQGDISDGD 381


>ref|XP_021275835.1| DNA repair protein recA homolog 3, mitochondrial [Herrania umbratica]
 ref|XP_021275836.1| DNA repair protein recA homolog 3, mitochondrial [Herrania umbratica]
          Length = 420

 Score =  489 bits (1260), Expect = e-166
 Identities = 257/381 (67%), Positives = 296/381 (77%), Gaps = 8/381 (2%)
 Frame = +3

Query: 3    CRQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMW 182
            CR+G+LGS+SQ   FS+K +R            NMSKK++AL QALDQI +SFGKG+IMW
Sbjct: 21   CRRGVLGSSSQLCAFSSKGRRKSKSDGSDSCDENMSKKELALKQALDQITSSFGKGSIMW 80

Query: 183  LGRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNG 362
            LGRS +P++VPV+STGSFALDIALG GGLPKGRVVEIYGPEASGKTTLALHVIAEAQK G
Sbjct: 81   LGRSVSPKDVPVVSTGSFALDIALGTGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQG 140

Query: 363  GYCAFVDAEHALDPALAESIGVKTENLLLS-------XXXXXXXXXXXXXXXXXVVDSVA 521
            GYC FVDAEHALD ALAE+IGV TENLLLS                        VVDSVA
Sbjct: 141  GYCVFVDAEHALDSALAEAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVA 200

Query: 522  ALVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTF-GFGG 698
            ALVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQTIL+F+NQVRSKL TF GFGG
Sbjct: 201  ALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFVNQVRSKLSTFGGFGG 260

Query: 699  PTEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEF 878
            PTEVT GGNALKFY+SVRLNI+R G VKKGEETIGSQ+LVK+VKNK APPFKTAQFELEF
Sbjct: 261  PTEVTCGGNALKFYASVRLNIRRTGLVKKGEETIGSQVLVKIVKNKLAPPFKTAQFELEF 320

Query: 879  GKGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXX 1058
            G+GI+RE EIIDL  KHKF+++SGA+YSFND   HGK+A K++ AE+             
Sbjct: 321  GRGISREGEIIDLALKHKFVTKSGAFYSFNDHKIHGKEAFKKFLAENESACEELVMKLRE 380

Query: 1059 XXIRSEIEKKHDSETEAPDGD 1121
              +  E E+K + +T+  DG+
Sbjct: 381  KLL--ETERKKERQTDISDGN 399


>ref|XP_017237624.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            isoform X1 [Daucus carota subsp. sativus]
 gb|KZN03210.1| hypothetical protein DCAR_011966 [Daucus carota subsp. sativus]
          Length = 424

 Score =  489 bits (1259), Expect = e-166
 Identities = 254/378 (67%), Positives = 297/378 (78%), Gaps = 8/378 (2%)
 Frame = +3

Query: 6    RQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMWL 185
            R+G+LG+ SQ  NFS++ KR            NMSKKD+AL QALDQI  SFGKG+IMWL
Sbjct: 25   RKGVLGTASQLSNFSSRGKRKAKSDESDSGEENMSKKDLALKQALDQITTSFGKGSIMWL 84

Query: 186  GRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNGG 365
            GRS +P+EVPVISTGSF LD+ALGIGG PKGRVVEI+GPEASGKTTLALHVIAEAQK GG
Sbjct: 85   GRSVSPKEVPVISTGSFTLDLALGIGGFPKGRVVEIFGPEASGKTTLALHVIAEAQKQGG 144

Query: 366  YCAFVDAEHALDPALAESIGVKTENLLLSXXXXXXXXXXXXXXXXX-------VVDSVAA 524
            YC FVDAEHALDPALA++IGV TENLLLS                        VVDSVAA
Sbjct: 145  YCVFVDAEHALDPALAKAIGVNTENLLLSQPDCGEQALSLVDTIIRSGSVDVVVVDSVAA 204

Query: 525  LVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTFGFGGPT 704
            LVPKSEL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQTIL+FINQVR+KL TFGFGGPT
Sbjct: 205  LVPKSELDGEMGDAHMAMQARLMSQALRKLSHSLSMSQTILIFINQVRAKLSTFGFGGPT 264

Query: 705  EVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFGK 884
            EVT GGNALKFY+S+RLNI+R   VKKGEET+GSQ+ VK+VKNKHAPPF+TAQFELEFGK
Sbjct: 265  EVTCGGNALKFYASMRLNIRRTALVKKGEETVGSQVTVKIVKNKHAPPFRTAQFELEFGK 324

Query: 885  GIARESEIIDLGCKHKFISRSG-AYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXXX 1061
            GI++E+EI++LGCKHKFI+++G AYY+ N  +F GKDA+KR+ AE+              
Sbjct: 325  GISQEAEILELGCKHKFITKAGTAYYNLNGRSFCGKDAIKRFLAENQDAKEELVMKLREK 384

Query: 1062 XIRSEIEKKHDSETEAPD 1115
             I SE  K+ ++ETE+ +
Sbjct: 385  LIDSERHKEIENETESTE 402


>ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial [Vitis
            vinifera]
 emb|CBI27899.3| unnamed protein product, partial [Vitis vinifera]
          Length = 421

 Score =  489 bits (1258), Expect = e-166
 Identities = 259/382 (67%), Positives = 297/382 (77%), Gaps = 9/382 (2%)
 Frame = +3

Query: 6    RQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMWL 185
            R+G+LG++SQF NFS+K +R            N+SKK++AL QALDQI  SFGKG+IMWL
Sbjct: 22   RKGVLGTSSQFCNFSSKGRRRSKSDGSDSNEENLSKKELALRQALDQITTSFGKGSIMWL 81

Query: 186  GRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNGG 365
            GRS + + VPV+STGSFALDI LGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQK GG
Sbjct: 82   GRSVSSKHVPVVSTGSFALDIVLGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGG 141

Query: 366  YCAFVDAEHALDPALAESIGVKTENLLLS-------XXXXXXXXXXXXXXXXXVVDSVAA 524
            YC FVDAEHALDPALAE+IGV T+NLLLS                        VVDSVAA
Sbjct: 142  YCVFVDAEHALDPALAEAIGVNTQNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAA 201

Query: 525  LVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTF-GFGGP 701
            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQTIL+FINQVR+KL TF GFGGP
Sbjct: 202  LVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSTFGGFGGP 261

Query: 702  TEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFG 881
            TEVT GGNALKFY+SVRLNIKRIG VKKGEETIGSQ+LVKVVKNKHAPPFKTAQFELEFG
Sbjct: 262  TEVTCGGNALKFYASVRLNIKRIGLVKKGEETIGSQVLVKVVKNKHAPPFKTAQFELEFG 321

Query: 882  KGIARESEIIDLGCKHKFISR-SGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXX 1058
            KGI RESEI++LGCKHKFI +  GA YS+N ++F GKDA+K++ +++             
Sbjct: 322  KGICRESEIVELGCKHKFIIKGGGAMYSYNGQSFRGKDAIKQFLSQNESEREELMRKLRE 381

Query: 1059 XXIRSEIEKKHDSETEAPDGDV 1124
              +  E  K+ + E EA D D+
Sbjct: 382  KLV-GETNKEKELEAEAVDEDI 402


>ref|XP_004970942.1| DNA repair protein recA homolog 3, mitochondrial [Setaria italica]
 gb|KQL08175.1| hypothetical protein SETIT_001546mg [Setaria italica]
          Length = 427

 Score =  489 bits (1258), Expect = e-166
 Identities = 260/377 (68%), Positives = 289/377 (76%), Gaps = 8/377 (2%)
 Frame = +3

Query: 6    RQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMWL 185
            +QGI GS    R FS+KAK+            NMSKKD+ALHQA+DQI ++FGKGAIMWL
Sbjct: 28   KQGICGSTFHCREFSSKAKKKSKSSGTDSGEENMSKKDLALHQAIDQITSAFGKGAIMWL 87

Query: 186  GRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNGG 365
            GRS   R+VPVISTGSFALD+ALG GG PKGRV+E+YGPEASGKTTLALHVIAEAQKNGG
Sbjct: 88   GRSQGHRDVPVISTGSFALDMALGTGGFPKGRVIEVYGPEASGKTTLALHVIAEAQKNGG 147

Query: 366  YCAFVDAEHALDPALAESIGVKTENLLLSXXXXXXXXXXXXXXXXX-------VVDSVAA 524
            YCAFVDAEHALDPALAESIGV T NLLLS                        VVDSVAA
Sbjct: 148  YCAFVDAEHALDPALAESIGVDTNNLLLSQPDCAEQALSLVDTLIRSGSVDVVVVDSVAA 207

Query: 525  LVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTFGFGGPT 704
            LVPK+EL+GEMGDAH+ALQARLMSQALRKLSHSLS+SQTILLFINQ R+K+ TFGFGGPT
Sbjct: 208  LVPKTELDGEMGDAHVALQARLMSQALRKLSHSLSLSQTILLFINQTRAKVATFGFGGPT 267

Query: 705  EVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFGK 884
            EVTSGGNALKFY+SVRLNIKRIG VKKGEETIGSQ+ VK+VKNKHAPPFKTAQFE+EFGK
Sbjct: 268  EVTSGGNALKFYASVRLNIKRIGLVKKGEETIGSQVAVKIVKNKHAPPFKTAQFEIEFGK 327

Query: 885  GIARESEIIDLGCKHKFISR-SGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXXX 1061
            GI R SE+++LG K K I + SGAYYSFND TFHGKD +K Y  E+              
Sbjct: 328  GICRSSELVELGLKRKLIKKISGAYYSFNDITFHGKDNLKSYLTENESVAKDL------- 380

Query: 1062 XIRSEIEKKHDSETEAP 1112
                E++ K   ETEAP
Sbjct: 381  ----EMQLKKLMETEAP 393


>ref|XP_011077996.1| DNA repair protein recA homolog 3, mitochondrial [Sesamum indicum]
          Length = 423

 Score =  488 bits (1256), Expect = e-165
 Identities = 256/380 (67%), Positives = 295/380 (77%), Gaps = 8/380 (2%)
 Frame = +3

Query: 6    RQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMWL 185
            R+G+L +++Q R+FS K +R            NMSKKD+AL  ALDQI ASFGKG+IMWL
Sbjct: 23   RKGVLETSTQLRDFSTKGRRKSKSDASDSGEENMSKKDLALKLALDQITASFGKGSIMWL 82

Query: 186  GRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNGG 365
            GRS APR+ PV+STGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQK GG
Sbjct: 83   GRSVAPRQTPVVSTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGG 142

Query: 366  YCAFVDAEHALDPALAESIGVKTENLLLS-------XXXXXXXXXXXXXXXXXVVDSVAA 524
            YC FVDAEHALDPALAE+IGV TENLLLS                        VVDSVAA
Sbjct: 143  YCVFVDAEHALDPALAEAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAA 202

Query: 525  LVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTF-GFGGP 701
            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQTIL+F NQVRSKL TF GFGGP
Sbjct: 203  LVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFTNQVRSKLSTFGGFGGP 262

Query: 702  TEVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFG 881
            TEVT GGNALKFY+SVRLNIKR G VKKGEET+GSQ++VK+VKNKHAPPFKTA+FELEFG
Sbjct: 263  TEVTCGGNALKFYASVRLNIKRTGLVKKGEETVGSQVVVKIVKNKHAPPFKTAEFELEFG 322

Query: 882  KGIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXXX 1061
            +GI RE+E+IDLGCKHKFI+++GAY+  ++++F GKDA+KR+ A++              
Sbjct: 323  RGICREAELIDLGCKHKFITKAGAYFYMDNQSFQGKDALKRFLADNVSARDGLTEKLRQK 382

Query: 1062 XIRSEIEKKHDSETEAPDGD 1121
             I  E E + +S   A D D
Sbjct: 383  LIDVEPENEKESIIGAIDRD 402


>ref|XP_017218404.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
            [Daucus carota subsp. sativus]
          Length = 416

 Score =  486 bits (1251), Expect = e-165
 Identities = 248/374 (66%), Positives = 292/374 (78%), Gaps = 7/374 (1%)
 Frame = +3

Query: 6    RQGILGSNSQFRNFSAKAKRXXXXXXXXXXXXNMSKKDVALHQALDQIQASFGKGAIMWL 185
            R+G+LG++SQ RN S+K KR            N+SKKD+AL QALDQI  +FGKG+IMWL
Sbjct: 22   REGLLGTSSQIRNLSSKGKRKCKSELSDSGEENLSKKDLALKQALDQITTAFGKGSIMWL 81

Query: 186  GRSNAPREVPVISTGSFALDIALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKNGG 365
            GRS +P+EVPV+STGS ALDIALGIGG PKGRVVEIYGPEASGKTTLALHVIAEAQK GG
Sbjct: 82   GRSASPKEVPVVSTGSLALDIALGIGGFPKGRVVEIYGPEASGKTTLALHVIAEAQKQGG 141

Query: 366  YCAFVDAEHALDPALAESIGVKTENLLLSXXXXXXXXXXXXXXXXX-------VVDSVAA 524
            YC F+DAEHALDP LA+SIGV TENLLLS                        VVDSVAA
Sbjct: 142  YCVFIDAEHALDPILAKSIGVNTENLLLSQPDCGEQALSLVDTIIRSGSVDVVVVDSVAA 201

Query: 525  LVPKSELEGEMGDAHMALQARLMSQALRKLSHSLSVSQTILLFINQVRSKLQTFGFGGPT 704
            LVPK EL+GEMGDAHMA+QARLMSQALRKLSHSLS+SQTIL+FINQVR+KL   GFGGPT
Sbjct: 202  LVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQTILIFINQVRAKLSITGFGGPT 261

Query: 705  EVTSGGNALKFYSSVRLNIKRIGFVKKGEETIGSQILVKVVKNKHAPPFKTAQFELEFGK 884
            EVT GGNALKFY+S+RLN++RIGFVKKGEE IGSQ+LVK+VKNKHAPPF+TAQFELE+GK
Sbjct: 262  EVTCGGNALKFYASMRLNVRRIGFVKKGEEIIGSQVLVKIVKNKHAPPFRTAQFELEYGK 321

Query: 885  GIARESEIIDLGCKHKFISRSGAYYSFNDETFHGKDAMKRYFAESXXXXXXXXXXXXXXX 1064
            GI +E+E+I+LGCK KFI++SG++Y+ N +++HGKDA+KRY AE+               
Sbjct: 322  GICQEAEVIELGCKLKFITKSGSFYNLNGKSYHGKDALKRYLAENVSVKDELMANLREKL 381

Query: 1065 IRSEIEKKHDSETE 1106
              +E +K  +  TE
Sbjct: 382  TENEPDKDTEIHTE 395