BLASTX nr result
ID: Ophiopogon22_contig00021450
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00021450
(476 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008800497.1| PREDICTED: putative pentatricopeptide repeat... 65 2e-27
gb|OAP17385.1| hypothetical protein AXX17_AT1G68760 [Arabidopsis... 68 3e-26
ref|NP_177580.1| Tetratricopeptide repeat (TPR)-like superfamily... 68 3e-26
gb|OVA12223.1| Pentatricopeptide repeat [Macleaya cordata] 74 7e-26
ref|XP_009104764.1| PREDICTED: putative pentatricopeptide repeat... 72 1e-25
ref|XP_010089903.2| LOW QUALITY PROTEIN: putative pentatricopept... 65 2e-25
gb|EXB38563.1| hypothetical protein L484_008591 [Morus notabilis] 65 2e-25
ref|XP_015883428.1| PREDICTED: putative pentatricopeptide repeat... 66 7e-25
ref|XP_013591553.1| PREDICTED: putative pentatricopeptide repeat... 69 9e-25
ref|XP_013682487.2| putative pentatricopeptide repeat-containing... 69 9e-25
ref|XP_022544713.1| putative pentatricopeptide repeat-containing... 69 4e-24
gb|EFH63798.1| hypothetical protein ARALYDRAFT_339633 [Arabidops... 66 6e-24
ref|XP_020890837.1| putative pentatricopeptide repeat-containing... 66 6e-24
ref|XP_019152568.1| PREDICTED: putative pentatricopeptide repeat... 59 1e-23
ref|XP_009338951.2| PREDICTED: putative pentatricopeptide repeat... 64 2e-23
ref|XP_019083363.1| PREDICTED: putative pentatricopeptide repeat... 64 2e-23
ref|XP_006302229.2| putative pentatricopeptide repeat-containing... 67 3e-23
gb|EOA35127.1| hypothetical protein CARUB_v10020251mg [Capsella ... 67 3e-23
ref|XP_018445104.1| PREDICTED: putative pentatricopeptide repeat... 64 5e-23
ref|XP_017252964.1| PREDICTED: putative pentatricopeptide repeat... 59 6e-23
>ref|XP_008800497.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Phoenix dactylifera]
Length = 458
Score = 65.1 bits (157), Expect(3) = 2e-27
Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LL A L GNV +G AR+RLLELE + D+VT+SN YA AG+W+EK+ +R R K +R
Sbjct: 346 LLAASCLHGNVSLGALARRRLLELEPDYAGDDVTLSNVYAAAGLWDEKQDVRKRMKRQRD 405
Query: 469 PG 474
PG
Sbjct: 406 PG 407
Score = 61.2 bits (147), Expect(3) = 2e-27
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWT 290
NM YN++ +AHYGCM DLF R+G L++AY FI+ M VQ N VIW T
Sbjct: 297 NMQRDYNLRPRLAHYGCMVDLFCRAGLLEDAYAFIKGMPVQRNAVIWRT 345
Score = 44.3 bits (103), Expect(3) = 2e-27
Identities = 21/33 (63%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +2
Query: 47 SRGCR--PNGITFVGVLTACSHAGRVAEVKRQW 139
S GCR PN +TFVGVL ACSHAG V+E + W
Sbjct: 263 SNGCRVSPNHVTFVGVLMACSHAGLVSEGRFHW 295
>gb|OAP17385.1| hypothetical protein AXX17_AT1G68760 [Arabidopsis thaliana]
Length = 462
Score = 68.2 bits (165), Expect(3) = 3e-26
Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LLGACSL GNV +G ++R+ EL+ + + D V +SN YA GMW+EK +MR R + RR
Sbjct: 350 LLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRM 409
Query: 469 PG 474
PG
Sbjct: 410 PG 411
Score = 59.7 bits (143), Expect(3) = 3e-26
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWTFAG 299
+M M YN+K AH+GCM DLF RSG L++A+ FI M ++ NTVIW T G
Sbjct: 301 SMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLG 352
Score = 38.5 bits (88), Expect(3) = 3e-26
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 62 PNGITFVGVLTACSHAGRVAEVKRQW 139
PN +TF+GVL ACSH+G V E KR +
Sbjct: 274 PNDVTFIGVLMACSHSGLVEEGKRHF 299
>ref|NP_177580.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
sp|Q9CA73.1|PP119_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74400
gb|AAG52382.1|AC011765_34 hypothetical protein; 20273-21661 [Arabidopsis thaliana]
gb|AEE35587.1| Tetratricopeptide repeat (TPR)-like superfamily protein
[Arabidopsis thaliana]
Length = 462
Score = 68.2 bits (165), Expect(3) = 3e-26
Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LLGACSL GNV +G ++R+ EL+ + + D V +SN YA GMW+EK +MR R + RR
Sbjct: 350 LLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRM 409
Query: 469 PG 474
PG
Sbjct: 410 PG 411
Score = 59.7 bits (143), Expect(3) = 3e-26
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWTFAG 299
+M M YN+K AH+GCM DLF RSG L++A+ FI M ++ NTVIW T G
Sbjct: 301 SMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLG 352
Score = 38.5 bits (88), Expect(3) = 3e-26
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 62 PNGITFVGVLTACSHAGRVAEVKRQW 139
PN +TF+GVL ACSH+G V E KR +
Sbjct: 274 PNDVTFIGVLMACSHSGLVEEGKRHF 299
>gb|OVA12223.1| Pentatricopeptide repeat [Macleaya cordata]
Length = 351
Score = 73.9 bits (180), Expect(3) = 7e-26
Identities = 37/62 (59%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LLGACSL+ N+ +G + R +LLELE + D+VTMSN YA AGMW+EK +R R K RRA
Sbjct: 242 LLGACSLQSNIELGENVRHQLLELEPAYVGDDVTMSNTYAAAGMWDEKVVVRNRVKQRRA 301
Query: 469 PG 474
PG
Sbjct: 302 PG 303
Score = 55.8 bits (133), Expect(3) = 7e-26
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWTFAG 299
+MT Y +K ++HYGCM DL R+G L+EAY FI M + N VIW T G
Sbjct: 193 SMTKRYTLKPRISHYGCMVDLLCRAGLLKEAYDFIMEMPISPNAVIWRTLLG 244
Score = 35.4 bits (80), Expect(3) = 7e-26
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 47 SRGCRPNGITFVGVLTACSHAGRVAE 124
S+ PN ITF+GVL ACSH G V E
Sbjct: 161 SKLIHPNEITFIGVLIACSHGGLVEE 186
>ref|XP_009104764.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Brassica rapa]
ref|XP_018508715.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Brassica rapa]
ref|XP_018508716.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Brassica rapa]
Length = 467
Score = 72.4 bits (176), Expect(3) = 1e-25
Identities = 35/62 (56%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LLGACSL+GNV +G A++R+ EL+S+ + D V +SN YA GMW+EK RMR R + RR
Sbjct: 352 LLGACSLQGNVELGEEAQRRIFELDSDHVGDYVALSNIYAAKGMWDEKVRMRDRVRKRRE 411
Query: 469 PG 474
PG
Sbjct: 412 PG 413
Score = 53.9 bits (128), Expect(3) = 1e-25
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWTFAG 299
+M YN+K AH+GCM DL RSG+L++A+ FI M V+ N VIW T G
Sbjct: 303 SMVEDYNLKPREAHFGCMVDLLCRSGRLKDAHEFISQMPVKPNAVIWRTLLG 354
Score = 38.1 bits (87), Expect(3) = 1e-25
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 62 PNGITFVGVLTACSHAGRVAEVKRQW 139
PN +TF+GVL ACSH G V E KR +
Sbjct: 276 PNDVTFIGVLMACSHGGLVEEGKRHF 301
>ref|XP_010089903.2| LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing
protein At1g74400 [Morus notabilis]
Length = 482
Score = 65.1 bits (157), Expect(3) = 2e-25
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR--KGRR 465
LLGACSL G+V +G+ R++LLELE + D V +SN YA GMWE K +R + K RR
Sbjct: 368 LLGACSLNGSVELGSKVRQKLLELEPAHVGDSVVLSNIYAAEGMWERKMTVRDQMTKQRR 427
Query: 466 APG 474
+PG
Sbjct: 428 SPG 430
Score = 57.8 bits (138), Expect(3) = 2e-25
Identities = 27/52 (51%), Positives = 34/52 (65%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWTFAG 299
+M Y +K +HYGCM DLF R+G L+EAY FI M V+AN V+W T G
Sbjct: 319 SMVEDYGLKPKDSHYGCMVDLFCRAGMLEEAYDFISKMPVRANAVVWRTLLG 370
Score = 40.8 bits (94), Expect(3) = 2e-25
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +2
Query: 62 PNGITFVGVLTACSHAGRVAEVKRQW 139
PN +TF+GVL +CSHAG V E KRQ+
Sbjct: 292 PNDVTFIGVLMSCSHAGMVEEGKRQF 317
>gb|EXB38563.1| hypothetical protein L484_008591 [Morus notabilis]
Length = 451
Score = 65.1 bits (157), Expect(3) = 2e-25
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR--KGRR 465
LLGACSL G+V +G+ R++LLELE + D V +SN YA GMWE K +R + K RR
Sbjct: 368 LLGACSLNGSVELGSKVRQKLLELEPAHVGDSVVLSNIYAAEGMWERKMTVRDQMTKQRR 427
Query: 466 APG 474
+PG
Sbjct: 428 SPG 430
Score = 57.8 bits (138), Expect(3) = 2e-25
Identities = 27/52 (51%), Positives = 34/52 (65%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWTFAG 299
+M Y +K +HYGCM DLF R+G L+EAY FI M V+AN V+W T G
Sbjct: 319 SMVEDYGLKPKDSHYGCMVDLFCRAGMLEEAYDFISKMPVRANAVVWRTLLG 370
Score = 40.8 bits (94), Expect(3) = 2e-25
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +2
Query: 62 PNGITFVGVLTACSHAGRVAEVKRQW 139
PN +TF+GVL +CSHAG V E KRQ+
Sbjct: 292 PNDVTFIGVLMSCSHAGMVEEGKRQF 317
>ref|XP_015883428.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Ziziphus jujuba]
Length = 474
Score = 66.2 bits (160), Expect(3) = 7e-25
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LLGACSL GN+ +G R RLLELE + D V +SN YA GMW+ K+ +R + K RR+
Sbjct: 361 LLGACSLNGNIELGAQVRSRLLELEPGHVGDSVALSNLYASKGMWDRKKIVRDQIKQRRS 420
Query: 469 PG 474
PG
Sbjct: 421 PG 422
Score = 57.4 bits (137), Expect(3) = 7e-25
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWTFAG 299
+MT Y +K +H+GCM DLF R+G L+EAY FI M V+AN V+W T G
Sbjct: 312 SMTEDYGIKPRDSHFGCMVDLFCRAGLLEEAYDFILKMPVRANAVVWRTLLG 363
Score = 38.1 bits (87), Expect(3) = 7e-25
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 62 PNGITFVGVLTACSHAGRVAEVKRQW 139
PN +TF+GVL ACSHAG V E +R +
Sbjct: 285 PNDVTFIGVLMACSHAGLVKEGQRHF 310
>ref|XP_013591553.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Brassica oleracea var. oleracea]
ref|XP_013591554.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Brassica oleracea var. oleracea]
ref|XP_013591555.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Brassica oleracea var. oleracea]
ref|XP_013591556.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Brassica oleracea var. oleracea]
ref|XP_013591557.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Brassica oleracea var. oleracea]
ref|XP_013698891.2| putative pentatricopeptide repeat-containing protein At1g74400
[Brassica napus]
ref|XP_013698892.2| putative pentatricopeptide repeat-containing protein At1g74400
[Brassica napus]
ref|XP_013682485.2| putative pentatricopeptide repeat-containing protein At1g74400
[Brassica napus]
ref|XP_013682486.2| putative pentatricopeptide repeat-containing protein At1g74400
[Brassica napus]
ref|XP_022556208.1| putative pentatricopeptide repeat-containing protein At1g74400
[Brassica napus]
Length = 498
Score = 69.3 bits (168), Expect(3) = 9e-25
Identities = 33/62 (53%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LLGACSL+GNV +G A++R+ EL+S+ + D V +SN YA GMW+EK ++R R + RR
Sbjct: 383 LLGACSLQGNVELGEEAQRRIFELDSDHVGDYVALSNIYAAKGMWDEKLKIRDRVRKRRE 442
Query: 469 PG 474
PG
Sbjct: 443 PG 444
Score = 53.9 bits (128), Expect(3) = 9e-25
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWTFAG 299
+M YN+K AHYGC+ DL RSG+L++A+ FI M V+ N VIW T G
Sbjct: 334 SMVEDYNLKPRDAHYGCIVDLLCRSGRLKDAHDFINQMPVKPNAVIWRTLLG 385
Score = 38.1 bits (87), Expect(3) = 9e-25
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 62 PNGITFVGVLTACSHAGRVAEVKRQW 139
PN +TF+GVL ACSH G V E KR +
Sbjct: 307 PNDVTFIGVLMACSHGGLVEEGKRHF 332
>ref|XP_013682487.2| putative pentatricopeptide repeat-containing protein At1g74400
[Brassica napus]
Length = 466
Score = 69.3 bits (168), Expect(3) = 9e-25
Identities = 33/62 (53%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LLGACSL+GNV +G A++R+ EL+S+ + D V +SN YA GMW+EK ++R R + RR
Sbjct: 351 LLGACSLQGNVELGEEAQRRIFELDSDHVGDYVALSNIYAAKGMWDEKLKIRDRVRKRRE 410
Query: 469 PG 474
PG
Sbjct: 411 PG 412
Score = 53.9 bits (128), Expect(3) = 9e-25
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWTFAG 299
+M YN+K AHYGC+ DL RSG+L++A+ FI M V+ N VIW T G
Sbjct: 302 SMVEDYNLKPRDAHYGCIVDLLCRSGRLKDAHDFINQMPVKPNAVIWRTLLG 353
Score = 38.1 bits (87), Expect(3) = 9e-25
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 62 PNGITFVGVLTACSHAGRVAEVKRQW 139
PN +TF+GVL ACSH G V E KR +
Sbjct: 275 PNDVTFIGVLMACSHGGLVEEGKRHF 300
>ref|XP_022544713.1| putative pentatricopeptide repeat-containing protein At1g74400
[Brassica napus]
ref|XP_022556209.1| putative pentatricopeptide repeat-containing protein At1g74400
[Brassica napus]
Length = 467
Score = 68.9 bits (167), Expect(3) = 4e-24
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LL ACSL+GNV +G A++R+ EL+S+ + D V +SN YA GMW+EK +MR R + RR
Sbjct: 352 LLSACSLQGNVELGEEAQRRIFELDSDHVGDYVALSNIYAAKGMWDEKVKMRDRVRKRRE 411
Query: 469 PG 474
PG
Sbjct: 412 PG 413
Score = 52.0 bits (123), Expect(3) = 4e-24
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWT 290
+M YN+K AH+GCM DL RSG+L++A+ FI M V+ N VIW T
Sbjct: 303 SMVEDYNLKPREAHFGCMVDLLCRSGRLKDAHEFINQMPVKPNAVIWRT 351
Score = 38.1 bits (87), Expect(3) = 4e-24
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 62 PNGITFVGVLTACSHAGRVAEVKRQW 139
PN +TF+GVL ACSH G V E KR +
Sbjct: 276 PNDVTFIGVLMACSHGGLVEEGKRHF 301
>gb|EFH63798.1| hypothetical protein ARALYDRAFT_339633 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 65.9 bits (159), Expect(3) = 6e-24
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LLGAC L GNV +G +KR+ +LE + + D V +SN YA GMW+EK +MR R + RR
Sbjct: 350 LLGACILHGNVELGEEVQKRIFKLERDHVGDYVALSNIYASKGMWDEKWKMRDRVRKRRV 409
Query: 469 PG 474
PG
Sbjct: 410 PG 411
Score = 56.2 bits (134), Expect(3) = 6e-24
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWTFAG 299
+M + YN+K AH+GCM DLF RSG L++A+ FI+ M ++ N VIW T G
Sbjct: 301 SMIVDYNLKPRDAHFGCMVDLFCRSGHLKDAHEFIKQMPIKPNAVIWRTLLG 352
Score = 36.6 bits (83), Expect(3) = 6e-24
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 62 PNGITFVGVLTACSHAGRVAEVKR 133
PN +TF+GVL ACSH+G V E K+
Sbjct: 274 PNDVTFIGVLMACSHSGLVEEGKQ 297
>ref|XP_020890837.1| putative pentatricopeptide repeat-containing protein At1g74400
[Arabidopsis lyrata subsp. lyrata]
Length = 465
Score = 65.9 bits (159), Expect(3) = 6e-24
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LLGAC L GNV +G +KR+ +LE + + D V +SN YA GMW+EK +MR R + RR
Sbjct: 350 LLGACILHGNVELGEEVQKRIFKLERDHVGDYVALSNIYASKGMWDEKWKMRDRVRKRRV 409
Query: 469 PG 474
PG
Sbjct: 410 PG 411
Score = 56.2 bits (134), Expect(3) = 6e-24
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWTFAG 299
+M + YN+K AH+GCM DLF RSG L++A+ FI+ M ++ N VIW T G
Sbjct: 301 SMIVDYNLKPRDAHFGCMVDLFCRSGHLKDAHEFIKQMPIKPNAVIWRTLLG 352
Score = 36.6 bits (83), Expect(3) = 6e-24
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 62 PNGITFVGVLTACSHAGRVAEVKR 133
PN +TF+GVL ACSH+G V E K+
Sbjct: 274 PNDVTFIGVLMACSHSGLVEEGKQ 297
>ref|XP_019152568.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Ipomoea nil]
Length = 431
Score = 59.3 bits (142), Expect(3) = 1e-23
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWTFAG 299
+M Y ++ ++HYGCM DLF R G L+EAYGFI AM ++AN VIW T G
Sbjct: 311 SMVQEYCIEPRLSHYGCMVDLFCRRGLLKEAYGFILAMPIRANGVIWRTLLG 362
Score = 56.2 bits (134), Expect(3) = 1e-23
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LLG+C + GN + A RL+EL+ D+V MSN A GMWEEK ++R K RR
Sbjct: 360 LLGSCGIHGNAELAAVAHSRLIELQEGVAGDDVVMSNICAGNGMWEEKVKLRDEMKQRRI 419
Query: 469 PG 474
PG
Sbjct: 420 PG 421
Score = 42.0 bits (97), Expect(3) = 1e-23
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +2
Query: 44 RSRGCRPNGITFVGVLTACSHAGRVAEVKRQW 139
+SR PN +TF+GVL ACSH GRV E KR +
Sbjct: 278 KSRLVVPNDVTFIGVLMACSHTGRVEEGKRHF 309
>ref|XP_009338951.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Pyrus x bretschneideri]
Length = 503
Score = 64.3 bits (155), Expect(3) = 2e-23
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LLGACSL GN+++G+ R +LLELE D+V +SN YA GMW+ K +R + K RR
Sbjct: 415 LLGACSLHGNIKLGSQVRVKLLELEPTYAGDDVALSNIYAAKGMWDRKMVVRDQMKQRRP 474
Query: 469 PG 474
PG
Sbjct: 475 PG 476
Score = 54.7 bits (130), Expect(3) = 2e-23
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWTFAG 299
+M+ Y +K AH+GCM DLF R+G LQEAY FI M +N V+W T G
Sbjct: 366 SMSQVYGLKPREAHFGCMVDLFCRAGLLQEAYDFILKMTGPSNAVMWRTLLG 417
Score = 37.7 bits (86), Expect(3) = 2e-23
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +2
Query: 62 PNGITFVGVLTACSHAGRVAEVK 130
PN +TF+GVL ACSHAG V E K
Sbjct: 339 PNDVTFIGVLMACSHAGMVEEGK 361
>ref|XP_019083363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Camelina sativa]
Length = 459
Score = 63.9 bits (154), Expect(3) = 2e-23
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LL AC L+GNV +G ++R+ EL+ + + D V +SN YA GMW+EK +MR R + RR
Sbjct: 350 LLSACCLQGNVELGEEVQRRIFELDHDHVGDYVALSNIYASKGMWDEKWKMRDRVRKRRV 409
Query: 469 PG 474
PG
Sbjct: 410 PG 411
Score = 54.7 bits (130), Expect(3) = 2e-23
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWT 290
+MT YN+K AH+GCM DLF RSG L++A+ FI M ++ N V+W T
Sbjct: 301 SMTEDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNAVLWRT 349
Score = 38.1 bits (87), Expect(3) = 2e-23
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 62 PNGITFVGVLTACSHAGRVAEVKRQW 139
PN +TF+GVL ACSH G V E KR +
Sbjct: 274 PNDVTFIGVLMACSHGGLVEEGKRHF 299
>ref|XP_006302229.2| putative pentatricopeptide repeat-containing protein At1g74400
[Capsella rubella]
Length = 467
Score = 66.6 bits (161), Expect(3) = 3e-23
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LL ACSL GNV +G ++R+ EL+ + + D V +SN YA GMW+EK +MR R + RR
Sbjct: 352 LLSACSLHGNVELGEEVQRRIFELDDDHVGDYVALSNIYASKGMWDEKRKMRDRVRKRRV 411
Query: 469 PG 474
PG
Sbjct: 412 PG 413
Score = 53.1 bits (126), Expect(3) = 3e-23
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWT 290
+M + YN+K AH+GCM DL R+G L++A+ FI M ++ NTVIW T
Sbjct: 303 SMIVDYNLKPRAAHFGCMVDLLCRAGHLKDAHEFINQMPIKPNTVIWRT 351
Score = 36.2 bits (82), Expect(3) = 3e-23
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 62 PNGITFVGVLTACSHAGRVAEVKR 133
PN +TF+GVL ACSH G V E K+
Sbjct: 276 PNDVTFIGVLMACSHGGLVEEGKQ 299
>gb|EOA35127.1| hypothetical protein CARUB_v10020251mg [Capsella rubella]
Length = 465
Score = 66.6 bits (161), Expect(3) = 3e-23
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LL ACSL GNV +G ++R+ EL+ + + D V +SN YA GMW+EK +MR R + RR
Sbjct: 350 LLSACSLHGNVELGEEVQRRIFELDDDHVGDYVALSNIYASKGMWDEKRKMRDRVRKRRV 409
Query: 469 PG 474
PG
Sbjct: 410 PG 411
Score = 53.1 bits (126), Expect(3) = 3e-23
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWT 290
+M + YN+K AH+GCM DL R+G L++A+ FI M ++ NTVIW T
Sbjct: 301 SMIVDYNLKPRAAHFGCMVDLLCRAGHLKDAHEFINQMPIKPNTVIWRT 349
Score = 36.2 bits (82), Expect(3) = 3e-23
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 62 PNGITFVGVLTACSHAGRVAEVKR 133
PN +TF+GVL ACSH G V E K+
Sbjct: 274 PNDVTFIGVLMACSHGGLVEEGKQ 297
>ref|XP_018445104.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Raphanus sativus]
ref|XP_018445105.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Raphanus sativus]
ref|XP_018445106.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Raphanus sativus]
ref|XP_018445107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Raphanus sativus]
ref|XP_018445108.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Raphanus sativus]
ref|XP_018445109.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Raphanus sativus]
ref|XP_018445110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Raphanus sativus]
Length = 466
Score = 63.9 bits (154), Expect(3) = 5e-23
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LLG CSL G+V +G ++R+ EL+ + D V +SN YA GMW+EK RMR R K RR
Sbjct: 351 LLGGCSLHGDVELGEEVQRRIFELDRGHVGDYVALSNIYAAKGMWDEKLRMRDRVKKRRE 410
Query: 469 PG 474
PG
Sbjct: 411 PG 412
Score = 53.1 bits (126), Expect(3) = 5e-23
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWTFAG 299
+M YN+K AH+GCM DL RSG+L++A+ F+ M V+ N VIW T G
Sbjct: 302 SMVEDYNLKPRDAHFGCMVDLLCRSGRLKDAHEFVNQMPVKPNAVIWRTLLG 353
Score = 38.5 bits (88), Expect(3) = 5e-23
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 62 PNGITFVGVLTACSHAGRVAEVKRQW 139
PN +TF+GVL ACSH G V E +RQ+
Sbjct: 275 PNDVTFIGVLMACSHGGLVEEGERQF 300
>ref|XP_017252964.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400 [Daucus carota subsp. sativus]
Length = 434
Score = 58.9 bits (141), Expect(3) = 6e-23
Identities = 27/52 (51%), Positives = 34/52 (65%)
Frame = +3
Query: 144 NMTMCYNVKLNMAHYGCMDDLFRRSGQLQEAYGFIQAMLVQANTVIWWTFAG 299
+MT Y +K+ ++HYGCM DL R+G LQEAY FI M Q N V+W T G
Sbjct: 311 SMTDVYGLKVQLSHYGCMVDLLCRAGLLQEAYEFIMEMPKQTNAVVWRTLLG 362
Score = 54.3 bits (129), Expect(3) = 6e-23
Identities = 30/62 (48%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 292 LLGACSLKGNVRIGNHARKRLLELESECLKDEVTMSNAYAKAGMWEEKERMRTR-KGRRA 468
LLGACS GNV + A L L+ D+V MSN YA MW+EK +R + K RRA
Sbjct: 360 LLGACSSSGNVELAAIAHDHLRRLKKGLAGDDVAMSNVYAVTEMWDEKMMIRDQTKERRA 419
Query: 469 PG 474
PG
Sbjct: 420 PG 421
Score = 42.0 bits (97), Expect(3) = 6e-23
Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 35 DGMRSR---GCRPNGITFVGVLTACSHAGRVAEVKRQWG*HDDV 157
DG+R + PN +TFVGVL ACSHAG V E KR + DV
Sbjct: 272 DGLRKKRRPSIVPNSVTFVGVLMACSHAGLVEEGKRHFKSMTDV 315