BLASTX nr result

ID: Ophiopogon22_contig00021214 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00021214
         (593 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020246393.1| protein TIME FOR COFFEE-like isoform X1 [Asp...   179   7e-49
gb|ONK57846.1| uncharacterized protein A4U43_C09F4790 [Asparagus...   179   1e-48
ref|XP_011628677.1| protein TIME FOR COFFEE [Amborella trichopoda]     69   4e-10
gb|ERN20139.1| hypothetical protein AMTR_s00066p00076200 [Ambore...    69   4e-10

>ref|XP_020246393.1| protein TIME FOR COFFEE-like isoform X1 [Asparagus officinalis]
          Length = 833

 Score =  179 bits (455), Expect = 7e-49
 Identities = 113/218 (51%), Positives = 124/218 (56%), Gaps = 22/218 (10%)
 Frame = +2

Query: 2    FQQQLVKFNPLWQADGSLGKPYNLSTLPQPGLLVLGGRVIRNPYATIGSSAVS-----LN 166
            FQQQLVK NP  Q  GSLGKPYNLS +PQPG L+LGG VIRNP A I  S+ S     LN
Sbjct: 421  FQQQLVKLNPFCQTAGSLGKPYNLSAVPQPGALLLGGPVIRNPNAVINGSSRSSSTSPLN 480

Query: 167  CQYPVPNHSDSLKDAERGRHLFFQQSPQGGVFLFPINQMQ----GQKASYL--------- 307
             QYPVPN+SDS KDAE+GRHL  QQS QGG FLFPINQ+Q    GQKAS L         
Sbjct: 481  SQYPVPNYSDSSKDAEKGRHL-LQQSHQGGFFLFPINQIQSQAAGQKASDLSQAEKSLSK 539

Query: 308  PTXXXXXXXXXXXXXXXXXVPDPQYLTMFKGSYPFSNTSAHQSYIAQQQRPA----XXXX 475
                               +PD Q LTMFKG+ PF NT A+Q+YIAQQQRP         
Sbjct: 540  SNASSALALTSTSCSNLTAIPDNQNLTMFKGNNPFLNTPAYQAYIAQQQRPPLPLFHGSS 599

Query: 476  XXXXXXXXXXXXXXXTTVSTGSSSQKYLQAKQFLHSPK 589
                            T S GSS +  LQ KQ LHSPK
Sbjct: 600  NSSQLYSGALQLTPIPTASCGSSFENCLQEKQILHSPK 637


>gb|ONK57846.1| uncharacterized protein A4U43_C09F4790 [Asparagus officinalis]
          Length = 968

 Score =  179 bits (455), Expect = 1e-48
 Identities = 113/218 (51%), Positives = 124/218 (56%), Gaps = 22/218 (10%)
 Frame = +2

Query: 2    FQQQLVKFNPLWQADGSLGKPYNLSTLPQPGLLVLGGRVIRNPYATIGSSAVS-----LN 166
            FQQQLVK NP  Q  GSLGKPYNLS +PQPG L+LGG VIRNP A I  S+ S     LN
Sbjct: 556  FQQQLVKLNPFCQTAGSLGKPYNLSAVPQPGALLLGGPVIRNPNAVINGSSRSSSTSPLN 615

Query: 167  CQYPVPNHSDSLKDAERGRHLFFQQSPQGGVFLFPINQMQ----GQKASYL--------- 307
             QYPVPN+SDS KDAE+GRHL  QQS QGG FLFPINQ+Q    GQKAS L         
Sbjct: 616  SQYPVPNYSDSSKDAEKGRHL-LQQSHQGGFFLFPINQIQSQAAGQKASDLSQAEKSLSK 674

Query: 308  PTXXXXXXXXXXXXXXXXXVPDPQYLTMFKGSYPFSNTSAHQSYIAQQQRPA----XXXX 475
                               +PD Q LTMFKG+ PF NT A+Q+YIAQQQRP         
Sbjct: 675  SNASSALALTSTSCSNLTAIPDNQNLTMFKGNNPFLNTPAYQAYIAQQQRPPLPLFHGSS 734

Query: 476  XXXXXXXXXXXXXXXTTVSTGSSSQKYLQAKQFLHSPK 589
                            T S GSS +  LQ KQ LHSPK
Sbjct: 735  NSSQLYSGALQLTPIPTASCGSSFENCLQEKQILHSPK 772


>ref|XP_011628677.1| protein TIME FOR COFFEE [Amborella trichopoda]
          Length = 824

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 48/155 (30%), Positives = 65/155 (41%), Gaps = 18/155 (11%)
 Frame = +2

Query: 2   FQQQLVKFNPLWQADGSL----GKPYNLSTLPQPGLLVLGGRVIRNPYATI-----GSSA 154
           +QQQL + NP W A GS       PYNL+ +PQP  L+LGG VI+NP   +      +S 
Sbjct: 350 YQQQLARANPFWAAAGSAPIYTANPYNLNVMPQPEALMLGGAVIKNPALQLEKGLPPASV 409

Query: 155 VSLNCQYPVPNHSDSLKDAERGRHLFFQQSPQGGVFLFPINQMQ---------GQKASYL 307
                Q       +S  DA++   L  Q S QG   +FP+NQ +           +    
Sbjct: 410 ADFPGQSLREKTPNSFMDAQKKHLLLQQASQQGATLIFPVNQPRTGGTTKSENPSENGAK 469

Query: 308 PTXXXXXXXXXXXXXXXXXVPDPQYLTMFKGSYPF 412
           P                    + QYLTM +  YPF
Sbjct: 470 PLIPSSSNPATLNANLAATPSEAQYLTMLQAGYPF 504


>gb|ERN20139.1| hypothetical protein AMTR_s00066p00076200 [Amborella trichopoda]
          Length = 1046

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 48/155 (30%), Positives = 65/155 (41%), Gaps = 18/155 (11%)
 Frame = +2

Query: 2    FQQQLVKFNPLWQADGSL----GKPYNLSTLPQPGLLVLGGRVIRNPYATI-----GSSA 154
            +QQQL + NP W A GS       PYNL+ +PQP  L+LGG VI+NP   +      +S 
Sbjct: 572  YQQQLARANPFWAAAGSAPIYTANPYNLNVMPQPEALMLGGAVIKNPALQLEKGLPPASV 631

Query: 155  VSLNCQYPVPNHSDSLKDAERGRHLFFQQSPQGGVFLFPINQMQ---------GQKASYL 307
                 Q       +S  DA++   L  Q S QG   +FP+NQ +           +    
Sbjct: 632  ADFPGQSLREKTPNSFMDAQKKHLLLQQASQQGATLIFPVNQPRTGGTTKSENPSENGAK 691

Query: 308  PTXXXXXXXXXXXXXXXXXVPDPQYLTMFKGSYPF 412
            P                    + QYLTM +  YPF
Sbjct: 692  PLIPSSSNPATLNANLAATPSEAQYLTMLQAGYPF 726


Top