BLASTX nr result
ID: Ophiopogon22_contig00021198
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00021198
(1446 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020250513.1| LOW QUALITY PROTEIN: RNA polymerase sigma fa... 555 0.0
gb|ONK55039.1| uncharacterized protein A4U43_UnF8330 [Asparagus ... 524 0.0
ref|XP_010913927.1| PREDICTED: RNA polymerase sigma factor sigE,... 521 e-179
ref|XP_008810822.1| PREDICTED: RNA polymerase sigma factor sigE,... 508 e-174
ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,... 506 e-173
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,... 483 e-164
gb|OAY85601.1| RNA polymerase sigma factor sigE, chloroplastic/m... 480 e-163
gb|OVA11451.1| RNA polymerase sigma-70 [Macleaya cordata] 479 e-162
ref|XP_023899953.1| RNA polymerase sigma factor sigE, chloroplas... 476 e-161
ref|XP_009410848.1| PREDICTED: RNA polymerase sigma factor sigE,... 474 e-161
ref|XP_007219010.1| RNA polymerase sigma factor sigE, chloroplas... 474 e-161
gb|AKC88745.1| sigma factor [Melianthus villosus] 474 e-161
ref|XP_024176960.1| RNA polymerase sigma factor sigE, chloroplas... 473 e-160
ref|XP_008465379.1| PREDICTED: RNA polymerase sigma factor sigE,... 473 e-160
ref|XP_015878246.1| PREDICTED: RNA polymerase sigma factor sigE,... 472 e-160
ref|XP_016649816.1| PREDICTED: RNA polymerase sigma factor sigE,... 471 e-159
ref|XP_020105381.1| RNA polymerase sigma factor sigE, chloroplas... 468 e-158
ref|XP_021826343.1| RNA polymerase sigma factor sigE, chloroplas... 467 e-158
ref|XP_022140941.1| RNA polymerase sigma factor sigE, chloroplas... 467 e-158
ref|XP_020099399.1| RNA polymerase sigma factor sigE, chloroplas... 459 e-158
>ref|XP_020250513.1| LOW QUALITY PROTEIN: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Asparagus officinalis]
Length = 478
Score = 555 bits (1430), Expect = 0.0
Identities = 303/406 (74%), Positives = 324/406 (79%), Gaps = 2/406 (0%)
Frame = +1
Query: 235 DAELDYNEVAAALENIYKLSPGADVADAEGLDXXXXXXXXXXXXNINGVVXXXXXXXXXX 414
DA+LDYNEVAAALEN+YKLSP ADVA+ + ++ VV
Sbjct: 79 DADLDYNEVAAALENLYKLSPPADVAEEKKVEID--------------VVRNRKRRPKRL 124
Query: 415 XXXXXVE--RKRSMDGEIRGGFIMKHXXXXXXXXXXXXXYSVSSTDLVSLDWKKMKIPPV 588
VE RKRS +GEI GG K YSVS TDL SLDW+++KIPPV
Sbjct: 125 GLEKRVEAMRKRSREGEIGGGSSKKEEEEEIDRLVRE--YSVS-TDLGSLDWRRVKIPPV 181
Query: 589 LSSSEQARLFELMQPMKAIYEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKVGQAA 768
L S+E RLF+LMQPMKAI EVKENLH DLNKEPTEGELAAAVNMTV +LR+HI+VGQAA
Sbjct: 182 LGSAEHTRLFKLMQPMKAISEVKENLHKDLNKEPTEGELAAAVNMTVSELRKHIEVGQAA 241
Query: 769 RNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLSTYGL 948
RNKLI HNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFE KRGFRLSTYGL
Sbjct: 242 RNKLIKHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGL 301
Query: 949 FWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTGEEIISRVGISPER 1128
FWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLEL+ EL RLPT EEII+RVGISPER
Sbjct: 302 FWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELIIELNRLPTEEEIIARVGISPER 361
Query: 1129 YHDVRKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXXKPK 1308
YHDV +ASKSV+SLNSRHVVTQEEFINAITD+DGVGGDKRRQPA KPK
Sbjct: 362 YHDVMRASKSVFSLNSRHVVTQEEFINAITDVDGVGGDKRRQPALLRLALDDVLDSLKPK 421
Query: 1309 ESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELRALMKLKH 1446
ESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEL+ALMKLKH
Sbjct: 422 ESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKH 467
>gb|ONK55039.1| uncharacterized protein A4U43_UnF8330 [Asparagus officinalis]
Length = 346
Score = 524 bits (1349), Expect = 0.0
Identities = 276/337 (81%), Positives = 291/337 (86%)
Frame = +1
Query: 436 RKRSMDGEIRGGFIMKHXXXXXXXXXXXXXYSVSSTDLVSLDWKKMKIPPVLSSSEQARL 615
RKRS +GEI GG K YSVS TDL SLDW+++KIPPVL S+E RL
Sbjct: 2 RKRSREGEIGGGSSKKEEEEEIDRLVRE--YSVS-TDLGSLDWRRVKIPPVLGSAEHTRL 58
Query: 616 FELMQPMKAIYEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKVGQAARNKLIMHNL 795
F+LMQPMKAI EVKENLH DLNKEPTEGELAAAVNMTV +LR+HI+VGQAARNKLI HNL
Sbjct: 59 FKLMQPMKAISEVKENLHKDLNKEPTEGELAAAVNMTVSELRKHIEVGQAARNKLIKHNL 118
Query: 796 RLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLSTYGLFWIRHSIIR 975
RLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFE KRGFRLSTYGLFWIRHSIIR
Sbjct: 119 RLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHSIIR 178
Query: 976 SMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTGEEIISRVGISPERYHDVRKASK 1155
SMTTSSFTRVSFGIESVRQEIQKAKLEL+ EL RLPT EEII+RVGISPERYHDV +ASK
Sbjct: 179 SMTTSSFTRVSFGIESVRQEIQKAKLELIIELNRLPTEEEIIARVGISPERYHDVMRASK 238
Query: 1156 SVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRY 1335
SV+SLNSRHVVTQEEFINAITD+DGVGGDKRRQPA KPKESLVIRQRY
Sbjct: 239 SVFSLNSRHVVTQEEFINAITDVDGVGGDKRRQPALLRLALDDVLDSLKPKESLVIRQRY 298
Query: 1336 GLDGKGDRTLGEIAGNLNISREMVRKHELRALMKLKH 1446
GLDGKGDRTLGEIAGNLNISREMVRKHEL+ALMKLKH
Sbjct: 299 GLDGKGDRTLGEIAGNLNISREMVRKHELKALMKLKH 335
>ref|XP_010913927.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Elaeis guineensis]
ref|XP_010913942.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Elaeis guineensis]
Length = 498
Score = 521 bits (1341), Expect = e-179
Identities = 301/477 (63%), Positives = 329/477 (68%), Gaps = 9/477 (1%)
Frame = +1
Query: 43 RLSPTGPRPGSIVAFKTDRT-KCSAVAATTSHEPATIPLQQPPKEXXXXXXXXXXXXXXX 219
R SP RP +AF+TDR KCSA A ++ A P Q+PPK
Sbjct: 24 RRSPAFRRPFFCLAFRTDRAAKCSAAAVSSE---AVKPPQKPPKRAQATSVDAAPT---- 76
Query: 220 XXXXADAELDYNEVAAALENIYKLSPGADVADAEGLDXXXXXXXXXXXXNIN-------G 378
A +LDYNEVAAALENIYKLSP A+V+D E D
Sbjct: 77 ----ATQDLDYNEVAAALENIYKLSP-AEVSDVEETDQRGRRRRGRSRKRAKEGDGEEGN 131
Query: 379 VVXXXXXXXXXXXXXXXVERKRSMDGEIRGGFIM-KHXXXXXXXXXXXXXYSVSSTDLVS 555
VV + +R D E+ + YSVS TDL S
Sbjct: 132 VVRNRKRRVRRLSLEKRIALRRRKDEEVEMVAARDERRDLDEDVGKLLREYSVS-TDLAS 190
Query: 556 LDWKKMKIPPVLSSSEQARLFELMQPMKAIYEVKENLHNDLNKEPTEGELAAAVNMTVPQ 735
LDWKKMKIPPVLSS+E LFELMQPMKAI+EVK NL+ DLN+EPT+ ELAAAVNMTVPQ
Sbjct: 191 LDWKKMKIPPVLSSAEHNWLFELMQPMKAIFEVKHNLNKDLNREPTDAELAAAVNMTVPQ 250
Query: 736 LRRHIKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEL 915
LRRHI+VG+AARNKLI HNLRLVLFVINKYY EIASG KFQDLCQAGVKGLITAIDRFE
Sbjct: 251 LRRHIEVGRAARNKLIKHNLRLVLFVINKYYPEIASGQKFQDLCQAGVKGLITAIDRFEA 310
Query: 916 KRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTGEE 1095
KRGFRLSTYGLFWIRHSIIRSMT SSFTRV FGIESVRQEIQKAKLEL EL R+P EE
Sbjct: 311 KRGFRLSTYGLFWIRHSIIRSMTISSFTRVPFGIESVRQEIQKAKLELQFELGRVPKDEE 370
Query: 1096 IISRVGISPERYHDVRKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXX 1275
II RV ISPERY+DV KA+K ++SL++RH VTQEEFIN ITDIDGVGGDKRRQ A
Sbjct: 371 IIDRVKISPERYYDVMKAAKPIFSLHARHAVTQEEFINGITDIDGVGGDKRRQRALLRLA 430
Query: 1276 XXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELRALMKLKH 1446
KPKESLVIRQRYGLDGKGDRTLGEIAGNL+ISREMVRKHEL+A MKLKH
Sbjct: 431 LDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLSISREMVRKHELKAFMKLKH 487
>ref|XP_008810822.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Phoenix dactylifera]
Length = 498
Score = 508 bits (1308), Expect = e-174
Identities = 295/477 (61%), Positives = 321/477 (67%), Gaps = 9/477 (1%)
Frame = +1
Query: 43 RLSPTGPRPGSIVAFKTDRT-KCSAVAATTSHEPATIPLQQPPKEXXXXXXXXXXXXXXX 219
R P RP +AF+ D T KCSA A + A P Q+ K
Sbjct: 24 RRLPAPRRPFLCLAFRADWTAKCSAAAIPSE---AVKPPQKSSKRAQAASVDAPPT---- 76
Query: 220 XXXXADAELDYNEVAAALENIYKLSPGADVADAEGLDXXXXXXXXXXXXNIN-------G 378
A +LDYNEVAAALENIYKLSP A+V+D E D
Sbjct: 77 ----ATQDLDYNEVAAALENIYKLSP-AEVSDVEEADRRGRRRRGRSRKRAKEGDGEEGN 131
Query: 379 VVXXXXXXXXXXXXXXXVERKRSMDGEIRGGFIM-KHXXXXXXXXXXXXXYSVSSTDLVS 555
VV + +R D E+ + YSVS TDL S
Sbjct: 132 VVRNRKRRVRRLSLEKRIASRRRKDEEVEAAAARDERRDLDEDGEKLLREYSVS-TDLAS 190
Query: 556 LDWKKMKIPPVLSSSEQARLFELMQPMKAIYEVKENLHNDLNKEPTEGELAAAVNMTVPQ 735
LDWKKMKIPPVLSS+E RLFELMQPMKAI+EVK+NL DLN+EPT+ ELA AVNMTVP+
Sbjct: 191 LDWKKMKIPPVLSSAEHNRLFELMQPMKAIFEVKKNLDKDLNREPTDAELAVAVNMTVPR 250
Query: 736 LRRHIKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFEL 915
LRRHI+VGQAARN LI HNLRLVLFVINKYY EIASG KFQDLCQAGVKGLITAIDRFE
Sbjct: 251 LRRHIEVGQAARNMLIKHNLRLVLFVINKYYPEIASGQKFQDLCQAGVKGLITAIDRFEP 310
Query: 916 KRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTGEE 1095
KRGFRLSTYGLFWIRHSI RSMT SSFTRV FGIESVRQEIQKAKLEL EL RLP EE
Sbjct: 311 KRGFRLSTYGLFWIRHSITRSMTVSSFTRVPFGIESVRQEIQKAKLELQFELGRLPKDEE 370
Query: 1096 IISRVGISPERYHDVRKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXX 1275
II RV ISPERYHDV KA+K ++SL++RH VTQEEFI+ ITD+DGVGGDK RQ A
Sbjct: 371 IIDRVKISPERYHDVMKAAKPIFSLHARHAVTQEEFIDGITDMDGVGGDKHRQRALLRLA 430
Query: 1276 XXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELRALMKLKH 1446
KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEL+A MKLKH
Sbjct: 431 LDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELKAFMKLKH 487
>ref|XP_010266467.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Nelumbo nucifera]
Length = 514
Score = 506 bits (1303), Expect = e-173
Identities = 281/497 (56%), Positives = 337/497 (67%), Gaps = 16/497 (3%)
Frame = +1
Query: 4 AATTPPVRFVSRHRLSPTGPRPGSIVAFKTDRTKCSAVAATTSHEPATIPLQQPPKEXXX 183
+++ P+ SR + T + I+AFKTD+ K A+ T HEP +P+ P +
Sbjct: 9 SSSQTPLGLSSRFSVHQTQLKRPLILAFKTDKAKDRALV--THHEPIPLPMDTPKENQKR 66
Query: 184 XXXXXXXXXXXXXXXXADA-----ELDYNEVAAALENIYKLSPGADVADAEGLDXXXXXX 348
+A E+DYN+VAA LE+IYKLSP DV+D + D
Sbjct: 67 LRRATKPSKRVKVVCSDEASSCTIEMDYNDVAAKLESIYKLSPPTDVSDVDDTDRVGRRR 126
Query: 349 XXXXXX-----------NINGVVXXXXXXXXXXXXXXXVERKRSMDGEIRGGFIMKHXXX 495
+ + V+ R++ +G ++ + +
Sbjct: 127 RRTRKKLGEADRKTGKESSDNVIRNHNKNKRLSLDRRIALRRKKEEGAVQLSGVKEGSKE 186
Query: 496 XXXXXXXXXXYSVSSTDLVSLDWKKMKIPPVLSSSEQARLFELMQPMKAIYEVKENLHND 675
YSVS TDL SLDWKKMKIPPVL SSE A LF+LMQPM A++++KENLH D
Sbjct: 187 DGDVDKLVGEYSVS-TDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMNALFQMKENLHRD 245
Query: 676 LNKEPTEGELAAAVNMTVPQLRRHIKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKF 855
L +EPT+GELA + NM+V Q+RR I+VG+AARN+LI HNLRLVLFVINKY+QE A+G KF
Sbjct: 246 LGREPTDGELADSTNMSVFQVRRCIEVGRAARNRLIKHNLRLVLFVINKYFQEFANGPKF 305
Query: 856 QDLCQAGVKGLITAIDRFELKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQE 1035
QDLCQAGVKGLITAIDRFE KR FRLSTYGLFWIRH+I+RSMT SSFTRVSFG+ESVR E
Sbjct: 306 QDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIMRSMTLSSFTRVSFGLESVRVE 365
Query: 1036 IQKAKLELMCELQRLPTGEEIISRVGISPERYHDVRKASKSVYSLNSRHVVTQEEFINAI 1215
IQ+AKLELM EL+RLPT EEII +VGISPERYH+V KASK V+SL+SRH +TQEEFIN I
Sbjct: 366 IQRAKLELMFELERLPTEEEIIKKVGISPERYHEVIKASKPVFSLHSRHAITQEEFINGI 425
Query: 1216 TDIDGVGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNIS 1395
TDI+GVGGDKRRQPA KPKESLVIRQRYGLDGKGDRTLGEIAGNLNIS
Sbjct: 426 TDIEGVGGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNIS 485
Query: 1396 REMVRKHELRALMKLKH 1446
REMVRKHE++ALMKLKH
Sbjct: 486 REMVRKHEVKALMKLKH 502
>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Fragaria vesca subsp. vesca]
Length = 520
Score = 483 bits (1243), Expect = e-164
Identities = 270/476 (56%), Positives = 317/476 (66%), Gaps = 19/476 (3%)
Frame = +1
Query: 76 IVAFKTDRTKCSAVAATTSHEPATIPLQQPPKEXXXXXXXXXXXXXXXXXXXA---DAEL 246
IVAF+TD++ A+ A P I + ++ A D EL
Sbjct: 34 IVAFRTDKSDKKALVAPQEKVPLPIETGKKVQKRLGKARKLPKSVKAALIEEAPTCDLEL 93
Query: 247 DYNEVAAALENIYKLSPGADVADAEGLDXXXXXXXXXXXXNINGV-------------VX 387
DYNE AA LEN+YK SP + +D E +D I+ V V
Sbjct: 94 DYNEAAAKLENLYKRSPETEASDVENVDGLMIKRGRKRRKKISEVDDKVEKRTSDDIVVR 153
Query: 388 XXXXXXXXXXXXXXVERKRSMDGEIRGGFIMKHXXXXXXXXXXXXX---YSVSSTDLVSL 558
V K + D ++ + K YS +STDLVSL
Sbjct: 154 SVTKKAKRLSLDKRVALKWNKDEKVAASVVRKRKDKRSENEMMEELVREYS-ASTDLVSL 212
Query: 559 DWKKMKIPPVLSSSEQARLFELMQPMKAIYEVKENLHNDLNKEPTEGELAAAVNMTVPQL 738
DWKKM+IPPVLSSSE LF+LMQPMK + EVKE L DL +EP +GELA A NMTV Q+
Sbjct: 213 DWKKMRIPPVLSSSEHTWLFKLMQPMKGLLEVKEILQKDLGREPNKGELAEATNMTVVQV 272
Query: 739 RRHIKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELK 918
+RH++VG+AARNKLI HNLRLVLFVINKY+Q+ A+G KFQDLCQAGVKGLITAIDRFE +
Sbjct: 273 KRHLEVGRAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPQ 332
Query: 919 RGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTGEEI 1098
R FRLSTYGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQKAKLE++ +L+R+PT +EI
Sbjct: 333 RRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLEMLVQLKRMPTEDEI 392
Query: 1099 ISRVGISPERYHDVRKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXX 1278
I +VGISPERYH+V +ASK V+SLNSRH VTQEEFIN ITD+DGV GD RR+PA
Sbjct: 393 IEKVGISPERYHEVMRASKPVFSLNSRHSVTQEEFINGITDVDGVDGDNRRKPALLRLAI 452
Query: 1279 XXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELRALMKLKH 1446
KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE++ALMKLKH
Sbjct: 453 DDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKH 508
>gb|OAY85601.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial,
partial [Ananas comosus]
Length = 513
Score = 480 bits (1236), Expect = e-163
Identities = 264/405 (65%), Positives = 301/405 (74%), Gaps = 3/405 (0%)
Frame = +1
Query: 241 ELDYNEVAAALENIYKLSPGADVADAEGLDXXXXXXXXXXXXNINGVVXXXXXXXXXXXX 420
ELDY+E+AAALENIYKLSPG +V+D E L GVV
Sbjct: 119 ELDYDELAAALENIYKLSPG-EVSDEERLGGGDGDA---------GVVRSRRRRAKRLSL 168
Query: 421 XXXVERKRSM-DGEIR--GGFIMKHXXXXXXXXXXXXXYSVSSTDLVSLDWKKMKIPPVL 591
V +R +GE R GG + + + +S DL LDW++M+IPPVL
Sbjct: 169 EKRVALRRGKGEGERREHGGDVEELVRD-----------NSASMDLARLDWRRMRIPPVL 217
Query: 592 SSSEQARLFELMQPMKAIYEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKVGQAAR 771
S+E +RLFELMQPMK IYE+KE+LH DL +EPT+ E+AAA+NM V +LR+H++VG+AAR
Sbjct: 218 GSAEHSRLFELMQPMKVIYEMKESLHKDLLREPTDSEMAAAMNMRVSRLRQHVEVGRAAR 277
Query: 772 NKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLSTYGLF 951
NKLI HNLRLVLFVINKY+ EIASG KFQDLCQAGVKGLITAIDRFE KRGFRLSTYGLF
Sbjct: 278 NKLIKHNLRLVLFVINKYFPEIASGQKFQDLCQAGVKGLITAIDRFEQKRGFRLSTYGLF 337
Query: 952 WIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTGEEIISRVGISPERY 1131
WIRHSIIRSMT SSFT+V FGIES+RQEIQKAKL+L EL+R PT EEII RVG+SPERY
Sbjct: 338 WIRHSIIRSMTLSSFTKVPFGIESIRQEIQKAKLKLSFELERSPTEEEIIGRVGVSPERY 397
Query: 1132 HDVRKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXXKPKE 1311
+D+ KASK V SLNSRH VTQEEFI ITDIDG+ GDKRR A KPKE
Sbjct: 398 NDIIKASKPVISLNSRHAVTQEEFIKGITDIDGISGDKRRHAALLRLALDDVLDSLKPKE 457
Query: 1312 SLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELRALMKLKH 1446
SLVIRQRYGLDGKG+RTLGEIAGNLNISREMVRKHEL+ALMKLKH
Sbjct: 458 SLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHELKALMKLKH 502
>gb|OVA11451.1| RNA polymerase sigma-70 [Macleaya cordata]
Length = 513
Score = 479 bits (1233), Expect = e-162
Identities = 272/479 (56%), Positives = 320/479 (66%), Gaps = 22/479 (4%)
Frame = +1
Query: 76 IVAFKTDRTKCSAVAATTS--HEPATIPLQQPPKEXXXXXXXXXXXXXXXXXXXADAELD 249
++AFK+D+TK +A+ AT P P +Q +L
Sbjct: 33 VLAFKSDKTKNTALVATQESIQLPRDAPNEQKRLRRATESSKRVKAVSTDEPSPCALDLY 92
Query: 250 YNEVAAALENIYKLSPGADVADAEGLDXXXXXXXXXXXXNING----------VVXXXXX 399
Y E AA LENIYKL+ D +D E N +G VV
Sbjct: 93 YREAAAKLENIYKLNCPTDGSDVEDDYPVVRRRRRVKKVNKHGEKATKEASWKVVRSQKK 152
Query: 400 XXXXXXXXXXVERKRSM----------DGEIRGGFIMKHXXXXXXXXXXXXXYSVSSTDL 549
R++ DG+++GG ++ YSVS TDL
Sbjct: 153 MKRLGLDERIAVRRKEKEEITLSQGKEDGKMKGGDDVERLVRE---------YSVS-TDL 202
Query: 550 VSLDWKKMKIPPVLSSSEQARLFELMQPMKAIYEVKENLHNDLNKEPTEGELAAAVNMTV 729
VSLDWKKMKIP VL SSE LF+LMQPMK + +VKENLH D N+EPT+GELAAA NM+V
Sbjct: 203 VSLDWKKMKIPSVLPSSEHTWLFKLMQPMKVLLQVKENLHKDFNREPTDGELAAATNMSV 262
Query: 730 PQLRRHIKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRF 909
Q++RHI+VGQAARNKLI HNLRLVLFVINKY+Q+ A+G ++QDLCQAGVKGLITAIDRF
Sbjct: 263 IQVKRHIEVGQAARNKLIKHNLRLVLFVINKYFQDFANGPRYQDLCQAGVKGLITAIDRF 322
Query: 910 ELKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTG 1089
E +R RLSTYGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQ+AKL+LM EL+R PT
Sbjct: 323 EPQRKLRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRVEIQRAKLDLMFELEREPTE 382
Query: 1090 EEIISRVGISPERYHDVRKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXX 1269
EEII +VGISPERYH+V +ASK V+SL++RH+ TQEEFIN ITD+DGVGGDKRRQPA
Sbjct: 383 EEIIEKVGISPERYHEVMRASKPVFSLHARHLTTQEEFINGITDVDGVGGDKRRQPALLR 442
Query: 1270 XXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELRALMKLKH 1446
KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE++ALMKLKH
Sbjct: 443 LALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKH 501
>ref|XP_023899953.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
[Quercus suber]
gb|POE51204.1| isoform 2 of rna polymerase sigma factor sige,
chloroplastic/mitochondrial [Quercus suber]
Length = 515
Score = 476 bits (1224), Expect = e-161
Identities = 267/474 (56%), Positives = 314/474 (66%), Gaps = 17/474 (3%)
Frame = +1
Query: 76 IVAFKTDRTKCSAVAATTSHEPATIPLQQPPKEXXXXXXXXXXXXXXXXXXXADA---EL 246
IVAFK D+ +A A + P I + + K+ A E+
Sbjct: 33 IVAFKVDKPNSTAAGAPQAQIPLPIEIHKDHKKRLVKANKPLRRVKAVLTDEASPCTLEV 92
Query: 247 DYNEVAAALENIYKLSPGADVADAEGLDXXXXXXXXXXXX----------NINGVVXXXX 396
DYNE AA LENIYKLSP D +D E +D N V+
Sbjct: 93 DYNEAAAQLENIYKLSPTTDTSDVENVDGTRKSRGRRRKIIEGDSKAENRTSNSVIKNRI 152
Query: 397 XXXXXXXXXXXVERKRSMDGEI----RGGFIMKHXXXXXXXXXXXXXYSVSSTDLVSLDW 564
+ K++ + E+ R ++K+ YS +STDLVSLDW
Sbjct: 153 KKVQRLNLDKRIALKKNKENEVVTLLRKRKVIKNENARIEKLVRE--YS-ASTDLVSLDW 209
Query: 565 KKMKIPPVLSSSEQARLFELMQPMKAIYEVKENLHNDLNKEPTEGELAAAVNMTVPQLRR 744
+KMKIPPVL SSE A LF+LMQPMKA+ EVK+NL DL +EPTEGELA A NM + Q+R+
Sbjct: 210 RKMKIPPVLPSSEHAWLFKLMQPMKALLEVKDNLQKDLGREPTEGELAEATNMNMVQVRK 269
Query: 745 HIKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRG 924
H++VG+AARNKLI HNLRL+LFVI KY+QE A+G KFQDLCQAGVKGLIT IDRFE KR
Sbjct: 270 HMEVGRAARNKLIKHNLRLILFVIKKYFQEFANGPKFQDLCQAGVKGLITGIDRFEPKRK 329
Query: 925 FRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTGEEIIS 1104
FRLSTY LFWIRH+IIRSMT SSFTRVSFG+ESVR EIQ+AKLEL+ EL RLPT EEII
Sbjct: 330 FRLSTYTLFWIRHAIIRSMTLSSFTRVSFGLESVRVEIQRAKLELLFELHRLPTKEEIIK 389
Query: 1105 RVGISPERYHDVRKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXX 1284
+VGISPERYH+V KASK V SL+SRH TQEE+IN I D+DGVG + +QPA
Sbjct: 390 KVGISPERYHEVLKASKPVLSLHSRHATTQEEYINGIPDVDGVGAENWKQPALQRLALDD 449
Query: 1285 XXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELRALMKLKH 1446
KPKESLVIRQR+GLDGKGDRTLGEIAGNLNISREMVRKHE++ALMKLKH
Sbjct: 450 VLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKH 503
>ref|XP_009410848.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Musa acuminata subsp.
malaccensis]
Length = 505
Score = 474 bits (1221), Expect = e-161
Identities = 263/400 (65%), Positives = 293/400 (73%)
Frame = +1
Query: 247 DYNEVAAALENIYKLSPGADVADAEGLDXXXXXXXXXXXXNINGVVXXXXXXXXXXXXXX 426
DY+EVAAALENIYKLSP ADV+D E + ++ VV
Sbjct: 99 DYSEVAAALENIYKLSP-ADVSDGE--ESGRQTVVKDGSLGVDNVVRNRKKRVKRLGLEE 155
Query: 427 XVERKRSMDGEIRGGFIMKHXXXXXXXXXXXXXYSVSSTDLVSLDWKKMKIPPVLSSSEQ 606
+ +R E ST+L SLDWK+MKIPPVLSS+E
Sbjct: 156 RISMRRRPKEEAGTEARRGEGREFDEDVEILVREYSGSTNLDSLDWKRMKIPPVLSSAEH 215
Query: 607 ARLFELMQPMKAIYEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKVGQAARNKLIM 786
LF+LMQPMKAI +VKE ++ DLN+EPT+GELA AVNM+VPQLRRHI+V +AAR+KLI
Sbjct: 216 TWLFKLMQPMKAILQVKEGMYKDLNREPTDGELADAVNMSVPQLRRHIEVARAARDKLIK 275
Query: 787 HNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLSTYGLFWIRHS 966
HNLRLVLFVINKYY EIASG KFQ+ CQAG KGLITAIDRFE KRGFRLSTY LFWIRHS
Sbjct: 276 HNLRLVLFVINKYYPEIASGQKFQEFCQAGAKGLITAIDRFEPKRGFRLSTYSLFWIRHS 335
Query: 967 IIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTGEEIISRVGISPERYHDVRK 1146
IIRSMT SSFT+V FGIESVRQEI+KAKLEL EL RLPT EEI+ RVGIS ERY++V K
Sbjct: 336 IIRSMTLSSFTKVPFGIESVRQEIKKAKLELSFELGRLPTEEEIVDRVGISLERYNEVMK 395
Query: 1147 ASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXXKPKESLVIR 1326
ASK V SLN+RHVVTQEEFIN ITDID VGGDKRRQPA +PKESLVIR
Sbjct: 396 ASKPVLSLNARHVVTQEEFINGITDID-VGGDKRRQPAVLRLALDDVLDSLRPKESLVIR 454
Query: 1327 QRYGLDGKGDRTLGEIAGNLNISREMVRKHELRALMKLKH 1446
QRYGLDGKGDRTLGEIAGNLNISREMVRKHEL+AL+KLKH
Sbjct: 455 QRYGLDGKGDRTLGEIAGNLNISREMVRKHELKALLKLKH 494
>ref|XP_007219010.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Prunus
persica]
gb|ONI25507.1| hypothetical protein PRUPE_2G307500 [Prunus persica]
Length = 519
Score = 474 bits (1221), Expect = e-161
Identities = 270/500 (54%), Positives = 325/500 (65%), Gaps = 19/500 (3%)
Frame = +1
Query: 4 AATTPPVRFVSRHRLSPTGPRPGSIVAFKTDRTKCSAVAATTSHEPATIPLQQPPKEXXX 183
+A+ P+ ++ + + R IVAFKTD +A+ A P I ++ ++
Sbjct: 9 SASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETRKKHQKRLG 68
Query: 184 XXXXXXXXXXXXXXXXADA---ELDYNEVAAALENIYKLSP----GADVADAEGL----- 327
A E+DYNE AA LEN+YK SP +DV D +GL
Sbjct: 69 KARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDVDGLMRRGR 128
Query: 328 ----DXXXXXXXXXXXXNINGVVXXXXXXXXXXXXXXXVERKRSMDGEIRGGFIMKHXXX 495
N VV V K + D ++ + K
Sbjct: 129 KRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISSIVRKRKSR 188
Query: 496 XXXXXXXXXX---YSVSSTDLVSLDWKKMKIPPVLSSSEQARLFELMQPMKAIYEVKENL 666
YS +STDLVSLDWKKMKIPPVL+SSE A LF+LMQPMK + EVKENL
Sbjct: 189 KNENEKIEELVREYS-TSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENL 247
Query: 667 HNDLNKEPTEGELAAAVNMTVPQLRRHIKVGQAARNKLIMHNLRLVLFVINKYYQEIASG 846
DL +EPT GELA A NM+V Q+++H++VG+AAR+KLI HNLRLVLFV+NKY+Q+ A+G
Sbjct: 248 QKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKYFQDFANG 307
Query: 847 DKFQDLCQAGVKGLITAIDRFELKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESV 1026
KFQDLCQAGVKGLITAIDRFE KR FRLSTYGLFWIRH+IIRSMT SSFTRVSFG+ESV
Sbjct: 308 PKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESV 367
Query: 1027 RQEIQKAKLELMCELQRLPTGEEIISRVGISPERYHDVRKASKSVYSLNSRHVVTQEEFI 1206
R EIQKAKL ++ L+R+PT +EII +VGISPERYH+V +ASK V+SL+SRH TQEEFI
Sbjct: 368 RAEIQKAKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSRHTTTQEEFI 427
Query: 1207 NAITDIDGVGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNL 1386
N ITD+DGV GD R++PA KPKESLVIRQRYGLDGKGDRTLGEIAGNL
Sbjct: 428 NGITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNL 487
Query: 1387 NISREMVRKHELRALMKLKH 1446
NISREMVRKHE++ALMKLKH
Sbjct: 488 NISREMVRKHEVKALMKLKH 507
>gb|AKC88745.1| sigma factor [Melianthus villosus]
Length = 513
Score = 474 bits (1220), Expect = e-161
Identities = 267/486 (54%), Positives = 316/486 (65%), Gaps = 15/486 (3%)
Frame = +1
Query: 34 SRHRLSPTGPRPGSIVAFKTDRTKCSAVAATTSHEPATIPLQQPPKEXXXXXXXXXXXXX 213
S HR + P IVAFKTD K + +A H+ +P+ K+
Sbjct: 22 SNHRCTLKRPL---IVAFKTD--KINDIALVAPHDQIPLPVANAKKQQKRLGRGTKPSKR 76
Query: 214 XXXXXXADA-----ELDYNEVAAALENIYKLSPGADVADAEGLDXXXXXXXXXXXXNING 378
++ ELD+NE AA LENIYKLSP +D +D E D +
Sbjct: 77 TKVVYADESSPCTLELDFNEAAAKLENIYKLSPPSDTSDVENQDGLMDRGRRRRRNRGDD 136
Query: 379 VVXXXXXXXXXXXXXXXVER----------KRSMDGEIRGGFIMKHXXXXXXXXXXXXXY 528
V+R + D ++ H Y
Sbjct: 137 TTQKRTTDNVVRNQTKKVKRLSLDKRVALIRHKEDVDVSRRRKTDHKNKSYNIEILVREY 196
Query: 529 SVSSTDLVSLDWKKMKIPPVLSSSEQARLFELMQPMKAIYEVKENLHNDLNKEPTEGELA 708
S SSTD+ SLDWKKMKIPPVLSSSE + LF+LMQPMK + KENL DL +EPT+ ELA
Sbjct: 197 S-SSTDMASLDWKKMKIPPVLSSSEHSWLFKLMQPMKGLLNFKENLKTDLGREPTDYELA 255
Query: 709 AAVNMTVPQLRRHIKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGL 888
A NM V +L++ ++VG+AARNKLI HNLRLVLFVINKY+Q+ A+G +FQDLCQAGVKGL
Sbjct: 256 DATNMNVVKLKKEMEVGRAARNKLIKHNLRLVLFVINKYFQDFANGSRFQDLCQAGVKGL 315
Query: 889 ITAIDRFELKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCE 1068
ITAIDRFE KR FRLSTYGLFWIRH+I RSMT SSFTRVSFG+ESVR EIQKAK EL+
Sbjct: 316 ITAIDRFEPKRKFRLSTYGLFWIRHAITRSMTLSSFTRVSFGLESVRAEIQKAKFELLFR 375
Query: 1069 LQRLPTGEEIISRVGISPERYHDVRKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKR 1248
LQRLPT EEII +VG+SPERYH+V +ASK V SL+++H++TQEEFIN ITD+DGVG D+R
Sbjct: 376 LQRLPTEEEIIEKVGVSPERYHEVLRASKPVLSLHAKHMITQEEFINVITDVDGVGADQR 435
Query: 1249 RQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELRA 1428
RQPA KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE++A
Sbjct: 436 RQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKA 495
Query: 1429 LMKLKH 1446
LMKLKH
Sbjct: 496 LMKLKH 501
>ref|XP_024176960.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Rosa
chinensis]
ref|XP_024176964.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Rosa
chinensis]
ref|XP_024176971.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Rosa
chinensis]
ref|XP_024176977.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Rosa
chinensis]
gb|PRQ60343.1| putative RNA polymerase sigma-70 like domain-containing protein [Rosa
chinensis]
Length = 519
Score = 473 bits (1218), Expect = e-160
Identities = 263/475 (55%), Positives = 319/475 (67%), Gaps = 18/475 (3%)
Frame = +1
Query: 76 IVAFKTDRTKCSAVAATTSHEPATIPLQQPPKEXXXXXXXXXXXXXXXXXXX--ADAELD 249
IVAF+TD++ +A+ A P I ++ ++ + ELD
Sbjct: 34 IVAFRTDKSNKNALVAPQEKVPLPIETRKKVQKLGKARKLPESVKAALIEEAPTCNLELD 93
Query: 250 YNEVAAALENIYKLSPGADVADAEGLDXXXXXXXXXXXXNINGV-------------VXX 390
YNE AA LEN+YK SP + +D E +D I+ V V
Sbjct: 94 YNEAAAKLENLYKRSPETEASDLENVDGLMIKRSRKRRKKISEVDDKVEKRKSDDIVVGS 153
Query: 391 XXXXXXXXXXXXXVERKRSMDGEIRGGFIMKHXXXXXXXXXXXXX---YSVSSTDLVSLD 561
V K + D ++ + K YS +STDLVSLD
Sbjct: 154 RTKKAKRLSLDKRVALKWNKDEKVAAPVVRKRKDRKSENQMIEELVREYS-ASTDLVSLD 212
Query: 562 WKKMKIPPVLSSSEQARLFELMQPMKAIYEVKENLHNDLNKEPTEGELAAAVNMTVPQLR 741
WKKM+IPPVL+SSE LF+LMQPMKA+ +VKE L DL +EP +GELA A + +V Q++
Sbjct: 213 WKKMRIPPVLTSSEHTWLFKLMQPMKALLQVKETLQKDLGREPNKGELAEATSTSVVQVK 272
Query: 742 RHIKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKR 921
+H++VG+AARNKLI HNLRLVLFVINKY+Q+ A+G KFQDLCQAGVKGLITAIDRFE +R
Sbjct: 273 KHLEVGRAARNKLIKHNLRLVLFVINKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPQR 332
Query: 922 GFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTGEEII 1101
FRLSTYGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQKAKLE++ +L+R+PT +EII
Sbjct: 333 RFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLEMLVQLKRMPTEDEII 392
Query: 1102 SRVGISPERYHDVRKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXX 1281
+VGISPERYH+V +ASK V+SL+SRH VTQEEFINAITD+DGV GD RR+PA
Sbjct: 393 EKVGISPERYHEVMRASKPVFSLHSRHSVTQEEFINAITDVDGVEGDNRRKPALLRLAID 452
Query: 1282 XXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELRALMKLKH 1446
KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE++ALMKLKH
Sbjct: 453 DVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKH 507
>ref|XP_008465379.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Cucumis melo]
Length = 511
Score = 473 bits (1217), Expect = e-160
Identities = 268/494 (54%), Positives = 321/494 (64%), Gaps = 13/494 (2%)
Frame = +1
Query: 4 AATTPPVRFVSRHRLSPTGPRPGSIVAFKTDRTKCSAVAATTSHEPATIPLQQPPKEXXX 183
+A P R ++ + + SIVAFK D K + + HE T+P++ +
Sbjct: 9 SAARTPFRLSAKFSNHGSTLKRPSIVAFKAD--KHTNTTLVSPHEQVTLPVESNNRSKKR 66
Query: 184 XXXXXXXXXXXXXXXXADA-----ELDYNEVAAALENIYKLSPGADVADAEGLDXXXXXX 348
+A +LDYNE AA LENI+KLSP + +D E D
Sbjct: 67 SGNTSKPLKRVKAVLIDEATSCSLDLDYNEAAAKLENIFKLSPMTEDSDMESKDGRSKRG 126
Query: 349 XXXXXXN----INGVVXXXXXXXXXXXXXXXVERKRSMDGEIRGGFIMKHXXXXXXXXXX 516
+ +G+V + K E + G +K
Sbjct: 127 QQRSKKSDKRPSDGIVRNKTKRIKRLDLDKRIALKNKRKAERKSGSFIKETKETKNEDDE 186
Query: 517 XXX----YSVSSTDLVSLDWKKMKIPPVLSSSEQARLFELMQPMKAIYEVKENLHNDLNK 684
YS +STDLVSLDWKKMKIPPVL SSE RLF+L+QPMKA+ EV+E L +L +
Sbjct: 187 IDRLVRDYS-ASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIEVQEELQKELGR 245
Query: 685 EPTEGELAAAVNMTVPQLRRHIKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDL 864
EPTE ELA A NM V Q+RR ++VG+AARNKLI HNLRLVLFVINKY+++ A+G KFQDL
Sbjct: 246 EPTEAELANATNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFATGPKFQDL 305
Query: 865 CQAGVKGLITAIDRFELKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQK 1044
CQAGVKGLITAIDRFE KR FRLSTY LFWIRH+IIRSMT SSFTRVSFG++SVR EIQ+
Sbjct: 306 CQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQR 365
Query: 1045 AKLELMCELQRLPTGEEIISRVGISPERYHDVRKASKSVYSLNSRHVVTQEEFINAITDI 1224
AKLEL+CEL RLPT EEII++VGISPERY +V +A+K VYSL+SRH T EE IN ITD+
Sbjct: 366 AKLELLCELHRLPTEEEIIAKVGISPERYLEVMRATKPVYSLHSRHSTTSEELINGITDV 425
Query: 1225 DGVGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREM 1404
+G GGD RRQPA KPKESLVIRQRYGLDGKG+RTLGEIAGNLNISREM
Sbjct: 426 EGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREM 485
Query: 1405 VRKHELRALMKLKH 1446
VRKHE++ALMKLKH
Sbjct: 486 VRKHEVKALMKLKH 499
>ref|XP_015878246.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Ziziphus jujuba]
Length = 515
Score = 472 bits (1214), Expect = e-160
Identities = 265/473 (56%), Positives = 314/473 (66%), Gaps = 16/473 (3%)
Frame = +1
Query: 76 IVAFKTDRTKCSAVAATTSHEPATIPLQQPPKEXXXXXXXXXXXXXXXXXXXADA----- 240
IVAFK D+ +A+ A HE +P++ + +A
Sbjct: 33 IVAFKADKFNETALVAP--HEQIPLPIEARKEHQKRLGKVNKPSKRVNAAITDEASTCTL 90
Query: 241 ELDYNEVAAALENIYKLSPGADVADAEGLDXXXXXXXXXXXX----------NINGVVXX 390
E+DYNE AA LENIYKLSP D +D E + V
Sbjct: 91 EVDYNEAAAKLENIYKLSPMTDASDVEDVGGLKTRGRRRKKKISADDEEEKRTSGSFVRS 150
Query: 391 XXXXXXXXXXXXXVERKRSMDGEIRGGFIMKHXXXXXXXXXXXXXYSVS-STDLVSLDWK 567
VE K++ E+ + S STDLVSLDWK
Sbjct: 151 RRKKAKRLNLDKRVELKKNKVDEVNACVRKRKESISENDNIENLVREYSASTDLVSLDWK 210
Query: 568 KMKIPPVLSSSEQARLFELMQPMKAIYEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRH 747
KMKIPPVL S+E A LF+LMQP+KA+ +V ENL L ++PTEGELA A NM++ Q++RH
Sbjct: 211 KMKIPPVLPSTEHAWLFKLMQPLKALLQVNENLKQSLGRKPTEGELAEATNMSIAQVKRH 270
Query: 748 IKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGF 927
++VG+AARNKLI HNLRLVLFVINKY+Q+ A+G +FQDLCQAGVKGLITAIDRFE KR F
Sbjct: 271 LEVGRAARNKLIKHNLRLVLFVINKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPKRRF 330
Query: 928 RLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTGEEIISR 1107
RLSTYGLFWIRH+IIRSMT SSF RVSFG+ESVR EIQKAKLELM EL+RLPT EEII +
Sbjct: 331 RLSTYGLFWIRHAIIRSMTLSSFQRVSFGLESVRAEIQKAKLELMFELKRLPTEEEIIEK 390
Query: 1108 VGISPERYHDVRKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXX 1287
VGISPERY++V +ASK+V+SL+SRH VTQEEFI+ ITD++GV GD RRQPA
Sbjct: 391 VGISPERYNEVMRASKAVFSLHSRHAVTQEEFIDGITDVEGVEGDNRRQPALLRLALDDV 450
Query: 1288 XXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELRALMKLKH 1446
KPKESLVIRQRYGLDG+GDRTLGEIAGNLNISREMVRKHE++ALMKLKH
Sbjct: 451 LDSLKPKESLVIRQRYGLDGRGDRTLGEIAGNLNISREMVRKHEVKALMKLKH 503
>ref|XP_016649816.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Prunus mume]
Length = 500
Score = 471 bits (1212), Expect = e-159
Identities = 266/473 (56%), Positives = 314/473 (66%), Gaps = 16/473 (3%)
Frame = +1
Query: 76 IVAFKTDRTKCSAVAATTSHEPATIPLQQPPKEXXXXXXXXXXXXXXXXXXXADAELDYN 255
IVAFKTD +A+ A P +P+++ E+DYN
Sbjct: 33 IVAFKTDEANKTALVAPQEKIP--LPIEKSATTDVASP--------------CTLEVDYN 76
Query: 256 EVAAALENIYKLSP----GADVADAEGL---------DXXXXXXXXXXXXNINGVVXXXX 396
E AA LEN+YK SP +DV D +GL N VV
Sbjct: 77 EAAAKLENLYKRSPETEANSDVEDVDGLMRRGRKRRKKTSESDADKEENRTSNTVVRNRT 136
Query: 397 XXXXXXXXXXXVERKRSMDGEIRGGFIMKHXXXXXXXXXXXXX---YSVSSTDLVSLDWK 567
V K + D ++ + K YS +STDLVSLDWK
Sbjct: 137 KKAKRLSLDKRVTLKWNKDEKVIASIVRKRKSRKNENEKIEELVREYS-ASTDLVSLDWK 195
Query: 568 KMKIPPVLSSSEQARLFELMQPMKAIYEVKENLHNDLNKEPTEGELAAAVNMTVPQLRRH 747
KMKIPPVL+SSE A LF+LMQPMK + EVKENL DL +EPT GELA A NM+V Q+++H
Sbjct: 196 KMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGREPTNGELAEATNMSVVQVKKH 255
Query: 748 IKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELKRGF 927
++VG+AAR+KLI HNLRLVLFV+NKY+Q+ A+G KFQDLCQAGVKGLITAIDRFE KR F
Sbjct: 256 LEVGRAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSF 315
Query: 928 RLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTGEEIISR 1107
RLSTYGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQKAKL ++ L+R+PT +EII +
Sbjct: 316 RLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEK 375
Query: 1108 VGISPERYHDVRKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXXXXX 1287
VGISPERYH+V +ASK V+SL+SRH TQEEFIN ITD+DGV GD R++PA
Sbjct: 376 VGISPERYHEVMRASKPVFSLHSRHTTTQEEFINGITDVDGVEGDNRQKPALLRLALDDV 435
Query: 1288 XXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELRALMKLKH 1446
KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE++ALMKLKH
Sbjct: 436 LDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKH 488
>ref|XP_020105381.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
[Ananas comosus]
Length = 523
Score = 468 bits (1204), Expect = e-158
Identities = 281/506 (55%), Positives = 324/506 (64%), Gaps = 25/506 (4%)
Frame = +1
Query: 4 AATTPPVRFVSRHRLSPTGPRPGSIVAFKTDRTK---CSAVAAT--TSHEPATIPLQQPP 168
A++ P FV R P ++ F D T+ CSA+A+ T EP L + P
Sbjct: 7 ASSGPQAPFVGVRRAPALRRPPPPLLFFAFDTTRPARCSALASPSETLKEPPRKTLTRAP 66
Query: 169 KEXXXXXXXXXXXXXXXXXXXADA---------ELDYNEVAAALENIYKLSPG--ADVAD 315
K+ + +LDYNEVAAALENIYKLSP +D+ D
Sbjct: 67 KQPKRVKAVSAAAAAAATAAASSPSAAAPPPPPDLDYNEVAAALENIYKLSPAEVSDIED 126
Query: 316 AEGLDXXXXXXXXXXXXNING--------VVXXXXXXXXXXXXXXXVERKRSMDGE-IRG 468
+ G + G VV V K GE +R
Sbjct: 127 SSGGRKKRRGRKKMEEEDEEGEGNVGRVSVVRSGRRRGRRLNLQKRVALKSERKGEKVRV 186
Query: 469 GFIMKHXXXXXXXXXXXXXYSVSSTDLVSLDWKKMKIPPVLSSSEQARLFELMQPMKAIY 648
++ +S STDL S DWKKMKIPPVLSSSE LF+LMQPMKAI+
Sbjct: 187 SKRGENRDLDEDLERLVREHS-QSTDLASFDWKKMKIPPVLSSSEHTWLFKLMQPMKAIF 245
Query: 649 EVKENLHNDLNKEPTEGELAAAVNMTVPQLRRHIKVGQAARNKLIMHNLRLVLFVINKYY 828
EVKENL DL++E T+GELA+A+NM+V +L+ HI+VGQAARNKLI HNLRLVLFVINKYY
Sbjct: 246 EVKENLQKDLDRELTDGELASAMNMSVSELQWHIEVGQAARNKLIKHNLRLVLFVINKYY 305
Query: 829 QEIASGDKFQDLCQAGVKGLITAIDRFELKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVS 1008
EIA+ KFQDLCQAG KGLITAIDRFE +RGFRLSTYGLFWIRHSI RSMTTSSF R+
Sbjct: 306 PEIANAQKFQDLCQAGAKGLITAIDRFEPRRGFRLSTYGLFWIRHSINRSMTTSSFMRLP 365
Query: 1009 FGIESVRQEIQKAKLELMCELQRLPTGEEIISRVGISPERYHDVRKASKSVYSLNSRHVV 1188
FG+ES+RQEIQKAKLEL EL R PT EEII RVGISPERY D KASK V+SL+++H V
Sbjct: 366 FGLESLRQEIQKAKLELSFELGRSPTEEEIIDRVGISPERYRDALKASKPVFSLHAKHAV 425
Query: 1189 TQEEFINAITDIDGVGGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLG 1368
TQEEFINAITD+DGV GDKRRQ A KPKESLVIRQR+GLDGKG RTLG
Sbjct: 426 TQEEFINAITDVDGVEGDKRRQSALLRLALDDVLDSLKPKESLVIRQRFGLDGKGYRTLG 485
Query: 1369 EIAGNLNISREMVRKHELRALMKLKH 1446
EIA NLNISREMVRK+EL+ALMKLKH
Sbjct: 486 EIARNLNISREMVRKYELKALMKLKH 511
>ref|XP_021826343.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Prunus
avium]
Length = 519
Score = 467 bits (1202), Expect = e-158
Identities = 267/476 (56%), Positives = 311/476 (65%), Gaps = 19/476 (3%)
Frame = +1
Query: 76 IVAFKTDRTKCSAVAATTSHEPATIPLQQPPKEXXXXXXXXXXXXXXXXXXXADA---EL 246
IVAFKTD +A+ A P I ++ ++ A EL
Sbjct: 33 IVAFKTDEANKTALVAPQEKIPLPIETRKKHQKRLGKARKLAKSVKSATTDVASPCTLEL 92
Query: 247 DYNEVAAALENIYKLSP----GADVADAEGL---------DXXXXXXXXXXXXNINGVVX 387
DYNE AA LEN+YK SP +DV +GL N VV
Sbjct: 93 DYNEAAAKLENLYKRSPETEANSDVEHVDGLMRRGRKRRKKTSESDDDKEENRTSNTVVR 152
Query: 388 XXXXXXXXXXXXXXVERKRSMDGEIRGGFIMKHXXXXXXXXXXXXX---YSVSSTDLVSL 558
V K + D I K YS +STDLVSL
Sbjct: 153 NRTKKAKRLSLDKRVALKWNKDENAIASIIRKRKSRKNENEKIEELVREYS-ASTDLVSL 211
Query: 559 DWKKMKIPPVLSSSEQARLFELMQPMKAIYEVKENLHNDLNKEPTEGELAAAVNMTVPQL 738
DWKKMKIPPVL+SSE A LF+LMQPMK + EVKENL L +EPT GELA A NM+V Q+
Sbjct: 212 DWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENLQKGLGREPTNGELAEATNMSVVQV 271
Query: 739 RRHIKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAIDRFELK 918
++H++VG+AAR+KLI HNLRLVLFV+NKY+Q+ A+G KFQDLCQAGVKGLITAIDRFE K
Sbjct: 272 KKHLEVGRAARSKLIKHNLRLVLFVMNKYFQDFANGPKFQDLCQAGVKGLITAIDRFEPK 331
Query: 919 RGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLPTGEEI 1098
R FRLSTYGLFWIRH+IIRSMT SSFTRVSFG+ESVR EIQKAKL ++ L+R+PT +EI
Sbjct: 332 RSFRLSTYGLFWIRHAIIRSMTLSSFTRVSFGLESVRAEIQKAKLGMLFALKRMPTVDEI 391
Query: 1099 ISRVGISPERYHDVRKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAXXXXXX 1278
I +VGISPERYH+V +ASK V+SL+SRH TQEEFIN ITD+DGV G+ RR+PA
Sbjct: 392 IEKVGISPERYHEVMRASKPVFSLHSRHTTTQEEFINGITDVDGVEGENRRKPALLRLAL 451
Query: 1279 XXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELRALMKLKH 1446
KPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHE++ALMKLKH
Sbjct: 452 DDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKH 507
>ref|XP_022140941.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
[Momordica charantia]
ref|XP_022140943.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
[Momordica charantia]
Length = 509
Score = 467 bits (1201), Expect = e-158
Identities = 262/491 (53%), Positives = 319/491 (64%), Gaps = 10/491 (2%)
Frame = +1
Query: 4 AATTPPVRFVSRHRLSPTGPRPGSIVAFKTDRTKCSAVAATTSHEPATIPLQQPPKEXXX 183
+A P+R ++ + + +IVAFK D K + + HE T+P++ +
Sbjct: 9 SAARTPLRLGAKFSNHNSTLKRPTIVAFKAD--KHTNTTLVSPHEQVTLPVESNNRTKKR 66
Query: 184 XXXXXXXXXXXXXXXXADA-----ELDYNEVAAALENIYKLSPGADVADAEGLDXXXXXX 348
+A E+DYNE AA LENI+ LSP D D E D
Sbjct: 67 SGKTSKSLKRVKAVFTDEASPCTSEVDYNEAAAKLENIFNLSPMTDDTDVESKDGRLRSG 126
Query: 349 XXXXXXNI----NGVVXXXXXXXXXXXXXXXVERKRSMDGEIRGGFIMKHXXXXXXXXXX 516
+ +G++ + K + + + +
Sbjct: 127 QQRRKKSDKRSGDGIIRNQTKRIKRLDLDKRIALKNNKEDKAAPSLKKQKETKNEADEID 186
Query: 517 XXXYSVS-STDLVSLDWKKMKIPPVLSSSEQARLFELMQPMKAIYEVKENLHNDLNKEPT 693
S STDLVSLDWKKMKIPPVL SSE RLF+L+QPMKA+ +V+E+L +L +EPT
Sbjct: 187 DLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEDLQKELGREPT 246
Query: 694 EGELAAAVNMTVPQLRRHIKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQA 873
EGELA A NM V Q+RR ++VG+AARNKLI HNLRLVLFVINKY+++ ASG KFQDLCQA
Sbjct: 247 EGELANATNMNVVQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQA 306
Query: 874 GVKGLITAIDRFELKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKL 1053
GVKGLITAIDRFE KR FRLSTY LFWIRH+IIRSMT SSFTRVSFG++SVR EIQ+AKL
Sbjct: 307 GVKGLITAIDRFEPKRRFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKL 366
Query: 1054 ELMCELQRLPTGEEIISRVGISPERYHDVRKASKSVYSLNSRHVVTQEEFINAITDIDGV 1233
EL+ EL RLPT EEI+++VGISPERY +V +A+K VYSL+SRH T EEFIN ITD++G
Sbjct: 367 ELLFELHRLPTEEEIVAKVGISPERYLEVMRATKPVYSLHSRHATTSEEFINGITDVEGA 426
Query: 1234 GGDKRRQPAXXXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK 1413
GGD RRQPA KPKESLVIRQRYGLDGKG+RTLGEIAGNLNISREMVRK
Sbjct: 427 GGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRK 486
Query: 1414 HELRALMKLKH 1446
HE++ALMKLKH
Sbjct: 487 HEVKALMKLKH 497
>ref|XP_020099399.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isoform
X1 [Ananas comosus]
Length = 313
Score = 459 bits (1181), Expect = e-158
Identities = 231/301 (76%), Positives = 258/301 (85%)
Frame = +1
Query: 544 DLVSLDWKKMKIPPVLSSSEQARLFELMQPMKAIYEVKENLHNDLNKEPTEGELAAAVNM 723
DL LDW++M+IPPVL S+E +RLFELMQPMK IYE+KE+LH DL +EPT+ E+AAA+NM
Sbjct: 2 DLACLDWRRMRIPPVLGSAEHSRLFELMQPMKVIYEMKESLHKDLLREPTDSEMAAAMNM 61
Query: 724 TVPQLRRHIKVGQAARNKLIMHNLRLVLFVINKYYQEIASGDKFQDLCQAGVKGLITAID 903
V +LR+H++VG+AARNKLI HNLRLVLFVINKY+ EIASG KFQDLCQAGVKGLITAID
Sbjct: 62 RVSRLRQHVEVGRAARNKLIKHNLRLVLFVINKYFPEIASGQKFQDLCQAGVKGLITAID 121
Query: 904 RFELKRGFRLSTYGLFWIRHSIIRSMTTSSFTRVSFGIESVRQEIQKAKLELMCELQRLP 1083
RFE KRGFRLSTYGLFWIRHSIIRSMT SSFT+V FGIES+RQEIQKAKL+L EL+R P
Sbjct: 122 RFEQKRGFRLSTYGLFWIRHSIIRSMTLSSFTKVPFGIESIRQEIQKAKLKLSFELERSP 181
Query: 1084 TGEEIISRVGISPERYHDVRKASKSVYSLNSRHVVTQEEFINAITDIDGVGGDKRRQPAX 1263
T EEII RVG+SPERY+D+ KASK V SLNSRH VTQEEFI ITDIDG+ GDKRR A
Sbjct: 182 TEEEIIGRVGVSPERYNDIIKASKPVISLNSRHAVTQEEFIKGITDIDGISGDKRRHAAL 241
Query: 1264 XXXXXXXXXXXXKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHELRALMKLK 1443
KPKESLVIRQRYGLDGKG+RTLGEIAGNLNISREMVRKHEL+ALMKLK
Sbjct: 242 LRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHELKALMKLK 301
Query: 1444 H 1446
H
Sbjct: 302 H 302