BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00020938
         (795 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   339   e-106
ref|WP_105280125.1| hypothetical protein [Escherichia coli] >gi|...   310   e-102
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   311   3e-94
ref|XP_015638684.1| PREDICTED: uncharacterized protein LOC107281...   295   2e-92
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]         293   3e-92
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   301   9e-92
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   306   1e-91
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   306   1e-91
ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024...   303   1e-90
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   298   6e-89
gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposo...   281   1e-88
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     295   2e-88
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo...   295   6e-88
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...   290   7e-88
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]        281   9e-88
gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposo...   278   1e-87
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     291   4e-87
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   291   5e-87
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     290   8e-87
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]         286   2e-86

>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1032

 Score =  339 bits (869), Expect = e-106
 Identities = 174/246 (70%), Positives = 197/246 (80%), Gaps = 3/246 (1%)
 Frame = +3

Query: 66   ILAYALPVEVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTGKKAI 245
            +++YA PV    D IP+TY EA   SE D+WR AM +EM+SL +N TW+LA LP GKKAI
Sbjct: 566  MVSYASPVA--SDDIPTTYIEAVKGSEEDKWRSAMSEEMESLRRNQTWKLANLPKGKKAI 623

Query: 246  GCK*VYAKEGSLSEG--VRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLALVAQY 419
            GCK VYAK+   S+   VR+KARLVAKGYAQ EG+DYNEVFSPVVKHSSIR+LLALVAQ 
Sbjct: 624  GCKWVYAKKDGFSDKSEVRYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRVLLALVAQL 683

Query: 420  DLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQWYKRF 596
            D++LVQ+DVKT FLHGDLEE IYMTQP GF+ AGKE + CKL+KSLYGLKQSPRQWYKRF
Sbjct: 684  DMELVQMDVKTAFLHGDLEEEIYMTQPEGFKVAGKENMFCKLEKSLYGLKQSPRQWYKRF 743

Query: 597  DSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LSNEFE 776
            D FM  + YTRS YD CVYL KL  G +IYLLLYVDDMLIASKN   I KLK  L+ EFE
Sbjct: 744  DKFMLRQKYTRSKYDHCVYLRKLHDGSFIYLLLYVDDMLIASKNKEEIEKLKTQLNGEFE 803

Query: 777  MKDLGE 794
            MKDLGE
Sbjct: 804  MKDLGE 809


>ref|WP_105280125.1| hypothetical protein [Escherichia coli]
 gb|PPY92707.1| hypothetical protein C5P31_25810 [Escherichia coli]
          Length = 324

 Score =  310 bits (795), Expect = e-102
 Identities = 155/225 (68%), Positives = 180/225 (80%), Gaps = 3/225 (1%)
 Frame = +3

Query: 63  MILAYALPVEVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTGKKA 242
           +I   A    ++ D +P+TY++A  SSE D+WR AM +EMQSL++N TW+LA LP GKKA
Sbjct: 94  LIETVACATSIVADDVPTTYKDAVQSSEEDKWRIAMNEEMQSLYQNHTWKLANLPKGKKA 153

Query: 243 IGCK*VYAKEGSLSE--GVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLALVAQ 416
           IGCK V+AK+        VR+KARLVAKGYAQ EG+DYNEVFSPVVKHSSIRI+LALVAQ
Sbjct: 154 IGCKWVFAKKEGFPNQVDVRYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIMLALVAQ 213

Query: 417 YDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQWYKR 593
            DL+LVQ+DVKT FLHG+LEE IYMTQP GF+ AGKE +VCKL+KSLYGLKQS RQWYKR
Sbjct: 214 LDLELVQMDVKTAFLHGNLEEEIYMTQPEGFKVAGKENMVCKLEKSLYGLKQSSRQWYKR 273

Query: 594 FDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKN 728
           FD FM  +GY RS YD CVYL KL  G +IYLLLYVDDM IASKN
Sbjct: 274 FDEFMLRQGYKRSKYDHCVYLRKLKDGSFIYLLLYVDDMFIASKN 318


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  311 bits (797), Expect = 3e-94
 Identities = 158/246 (64%), Positives = 195/246 (79%), Gaps = 4/246 (1%)
 Frame = +3

Query: 66   ILAYALPV-EVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTGKKA 242
            ++ YAL V E ++ + PSTY+EA +SS+S++W  AM DEM+SLHKN TW+L   P+G+K 
Sbjct: 775  MVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKI 834

Query: 243  IGCK*VYAKEGSLS--EGVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLALVAQ 416
            I CK V+ K+  +S  EGV++KAR+VA+G+ Q EGVDYNE+FSPVV+H+SIR+LLA+VA 
Sbjct: 835  ITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAH 894

Query: 417  YDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQWYKR 593
             +L+L QLDVKT FLHG+LEE IYMTQP GF+  GKE  VCKLKKSLYGLKQSPRQWYKR
Sbjct: 895  QNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKR 954

Query: 594  FDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LSNEF 773
            FDS+M   GYTRS YD CVY ++L    +IYL+LYVDDMLIA+K    I KLKG LS EF
Sbjct: 955  FDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSAEF 1014

Query: 774  EMKDLG 791
            EMKDLG
Sbjct: 1015 EMKDLG 1020


>ref|XP_015638684.1| PREDICTED: uncharacterized protein LOC107281003 [Oryza sativa
            Japonica Group]
          Length = 651

 Score =  295 bits (755), Expect = 2e-92
 Identities = 159/247 (64%), Positives = 190/247 (76%), Gaps = 5/247 (2%)
 Frame = +3

Query: 66   ILAYALPV--EVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTGKK 239
            I+AYAL V  E+  +  PSTY +A +S + +RW  AM DEM+SL KN +WEL KLP  KK
Sbjct: 360  IVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLEKNHSWELEKLPKEKK 419

Query: 240  AIGCK*VYA-KEG-SLSEGVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLALVA 413
             I CK ++  KEG S S+  R+KARLVAKGY+Q+ G+D+N+VFSPVVKHSSIR LL++VA
Sbjct: 420  PIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVA 479

Query: 414  QYDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQWYK 590
             +D +L Q+DVKT FLHG+LEE IYM QP GF   GKE LVC+LKKSLYGLKQSPRQWYK
Sbjct: 480  MHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYK 539

Query: 591  RFDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LSNE 770
            RFDSFM  + + RS YD CVYL K+  G  IYLLLYVDDMLIA+K+   IAKLK  LS+E
Sbjct: 540  RFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSE 598

Query: 771  FEMKDLG 791
            FEMKDLG
Sbjct: 599  FEMKDLG 605


>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
          Length = 621

 Score =  293 bits (751), Expect = 3e-92
 Identities = 155/247 (62%), Positives = 188/247 (76%), Gaps = 5/247 (2%)
 Frame = +3

Query: 66  ILAYALPV--EVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTGKK 239
           I+AYAL V  E+  +  PSTY EA +S + +RW  AM DEM+SL KN TWEL KLP  KK
Sbjct: 185 IVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKK 244

Query: 240 AIGCK*VYAKEGSLS--EGVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLALVA 413
            I CK ++ ++  +S  +   +KARLVAKGY+Q+ G+D+N+VFSPVVKHSSIR LL++VA
Sbjct: 245 PIRCKWIFKRKECISPSDEAMYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVA 304

Query: 414 QYDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQWYK 590
            +D +L Q+DVKT FLHG+LEE IYM QP GF   GKE LVC+LKKSLYGLKQSPRQWYK
Sbjct: 305 MHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYK 364

Query: 591 RFDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LSNE 770
           RFDSFM  + + RS YD CVY+ K+  G  IYLLLYVDDMLIA+K+   IAKLK  LS+E
Sbjct: 365 RFDSFMLSQKFRRSNYDSCVYV-KVADGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSE 423

Query: 771 FEMKDLG 791
           FEMKDLG
Sbjct: 424 FEMKDLG 430


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1032

 Score =  301 bits (771), Expect = 9e-92
 Identities = 151/250 (60%), Positives = 190/250 (76%), Gaps = 5/250 (2%)
 Frame = +3

Query: 57   DNMILAYALPV--EVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPT 230
            D+ + AYAL +  EV +D  P++Y EA    +S +W  AM +E++SLHKN+TW L KLP 
Sbjct: 491  DDNLTAYALSIAQEVNDDVEPASYSEAVSCVDSAKWLVAMNEEIESLHKNNTWNLTKLPK 550

Query: 231  GKKAIGCK*VYAKEGSLS--EGVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLA 404
            GK+ + CK +Y K+  +   E  R KARLV KG+ Q EG+D+NE+FSPVV+H+SIRILLA
Sbjct: 551  GKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEGIDFNEIFSPVVRHTSIRILLA 610

Query: 405  LVAQYDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQ 581
             VA +DL+L QLDVKT FLHG+LEE IYM QP GF    KE LVC+LKKSLYGLKQ+PRQ
Sbjct: 611  FVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVCQLKKSLYGLKQAPRQ 670

Query: 582  WYKRFDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*L 761
            WYK+FDSFM G+GY+RS YD C+Y  + P G +IYLLLYVDDMLIAS++   I+KLK  L
Sbjct: 671  WYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRDKSLISKLKAQL 730

Query: 762  SNEFEMKDLG 791
            +NEFEMK+LG
Sbjct: 731  NNEFEMKELG 740


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  306 bits (783), Expect = 1e-91
 Identities = 164/249 (65%), Positives = 186/249 (74%), Gaps = 3/249 (1%)
 Frame = +3

Query: 54   YDNMILAYALPVEVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTG 233
            Y N++ ++AL V       PS+Y EA    ES +W  AM +E++SLHKN TWEL K P+ 
Sbjct: 1283 YANLV-SFALSVAESIGIEPSSYNEAVTCDESAQWAIAMSEEIESLHKNHTWELVKPPSN 1341

Query: 234  KKAIGCK*VYAK-EGSLS-EGVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLAL 407
            +K +GCK V+ K EG L  E  RFKARLVAKG+ Q EG+DYNEVFSPVVKHSSIR+LLA+
Sbjct: 1342 QKIVGCKWVFKKKEGILGVEATRFKARLVAKGFTQKEGIDYNEVFSPVVKHSSIRVLLAM 1401

Query: 408  VAQYDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQW 584
            VA+ DL+L QLDVKT FLHG+LEE IYM QP GF   GKE+ VC LKKSLYGLKQSPRQW
Sbjct: 1402 VAKSDLELEQLDVKTAFLHGELEETIYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQW 1461

Query: 585  YKRFDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LS 764
            YKRFDSFM   GYTR  YD CVY  KL  G +IYLLLYVDDMLIASKN   I KLK  LS
Sbjct: 1462 YKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIYLLLYVDDMLIASKNMSEINKLKSQLS 1521

Query: 765  NEFEMKDLG 791
             EFEMKDLG
Sbjct: 1522 GEFEMKDLG 1530


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  306 bits (783), Expect = 1e-91
 Identities = 164/249 (65%), Positives = 186/249 (74%), Gaps = 3/249 (1%)
 Frame = +3

Query: 54   YDNMILAYALPVEVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTG 233
            Y N++ ++AL V       PS+Y EA    ES +W  AM +E++SLHKN TWEL K P+ 
Sbjct: 1304 YANLV-SFALSVAESIGIEPSSYNEAVTCDESAQWAIAMSEEIESLHKNHTWELVKPPSN 1362

Query: 234  KKAIGCK*VYAK-EGSLS-EGVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLAL 407
            +K +GCK V+ K EG L  E  RFKARLVAKG+ Q EG+DYNEVFSPVVKHSSIR+LLA+
Sbjct: 1363 QKIVGCKWVFKKKEGILGVEATRFKARLVAKGFTQKEGIDYNEVFSPVVKHSSIRVLLAM 1422

Query: 408  VAQYDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQW 584
            VA+ DL+L QLDVKT FLHG+LEE IYM QP GF   GKE+ VC LKKSLYGLKQSPRQW
Sbjct: 1423 VAKSDLELEQLDVKTAFLHGELEETIYMRQPEGFTVPGKEDHVCLLKKSLYGLKQSPRQW 1482

Query: 585  YKRFDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LS 764
            YKRFDSFM   GYTR  YD CVY  KL  G +IYLLLYVDDMLIASKN   I KLK  LS
Sbjct: 1483 YKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIYLLLYVDDMLIASKNMSEINKLKSQLS 1542

Query: 765  NEFEMKDLG 791
             EFEMKDLG
Sbjct: 1543 GEFEMKDLG 1551


>ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
          Length = 1892

 Score =  303 bits (775), Expect = 1e-90
 Identities = 156/249 (62%), Positives = 189/249 (75%), Gaps = 4/249 (1%)
 Frame = +3

Query: 57   DNMIL-AYALPVEVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTG 233
            +N+I  A+    E I+D  PS+Y EA    ++ +W+ AM +EM+SLH+N+TW L K P G
Sbjct: 1359 ENLIAQAFVAAEEEIKDLEPSSYIEATSCKDAAQWQLAMMEEMESLHRNETWVLVKRPKG 1418

Query: 234  KKAIGCK*VYAKEGSLSE--GVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLAL 407
             + +GCK VY K+  + E    RFKARLVAKG++Q EG+DYNE+FSPVVKHSSIR+LLAL
Sbjct: 1419 MRTVGCKWVYKKKEGIPEVEAARFKARLVAKGFSQKEGIDYNEIFSPVVKHSSIRVLLAL 1478

Query: 408  VAQYDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQW 584
            VAQ+DL+L QLDVKT FLHGDLEE IYM QP GF A GKE+ VC+LKKSLYGLKQSPRQW
Sbjct: 1479 VAQFDLELQQLDVKTAFLHGDLEETIYMDQPEGFLAEGKEDHVCQLKKSLYGLKQSPRQW 1538

Query: 585  YKRFDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LS 764
            YKRFD+FMT  G++RS +D CVY  K+ G   IYLLLYVDDMLIA+ N   I  LK  LS
Sbjct: 1539 YKRFDAFMTTHGFSRSAFDSCVYHKKMSGNSMIYLLLYVDDMLIAANNITEINILKKLLS 1598

Query: 765  NEFEMKDLG 791
             EF+MKDLG
Sbjct: 1599 KEFDMKDLG 1607


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  298 bits (763), Expect = 6e-89
 Identities = 160/247 (64%), Positives = 190/247 (76%), Gaps = 5/247 (2%)
 Frame = +3

Query: 66   ILAYALPV--EVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTGKK 239
            I+AYAL V  E+  +  PSTY EA +S + +RW  AM DEM+SL KN TWEL KLP  KK
Sbjct: 1006 IVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKK 1065

Query: 240  AIGCK*VYA-KEG-SLSEGVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLALVA 413
             I CK ++  KEG S S+  R+KARL+AKGY+Q+ G+D+N+VFSPVVKHSSIR LL++VA
Sbjct: 1066 PIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVA 1125

Query: 414  QYDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQWYK 590
             +D +L Q+DVKT FLHG+LEE IYM QP GF   GKE LVC+LKKSLYGLKQSPRQWYK
Sbjct: 1126 MHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYK 1185

Query: 591  RFDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LSNE 770
            RFDSFM  + + RS YD CVYL K+  G  IYLLLYVDDMLIA+K+   IAKLK  LS+E
Sbjct: 1186 RFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSE 1244

Query: 771  FEMKDLG 791
            FEMKDLG
Sbjct: 1245 FEMKDLG 1251


>gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 530

 Score =  281 bits (720), Expect = 1e-88
 Identities = 147/249 (59%), Positives = 181/249 (72%), Gaps = 4/249 (1%)
 Frame = +3

Query: 57  DNMILAYALPV-EVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTG 233
           D   +AYAL V E ++   P +Y+EA  S E+ +W  AM++EMQSL KN TWEL  LP G
Sbjct: 174 DTNSVAYALLVGENLDSDEPKSYKEAIQSKEASKWLIAMDEEMQSLKKNQTWELVPLPRG 233

Query: 234 KKAIGCK*VYAKEGSLS--EGVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLAL 407
            K +GCK V  ++  +   E  RFKARLVAKG++Q EG+DY+EVFSPVVKH +IR+LLA+
Sbjct: 234 VKPVGCKWVLKRKEGIPGVEPSRFKARLVAKGFSQKEGIDYHEVFSPVVKHKTIRVLLAM 293

Query: 408 VAQYDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQW 584
           V+  D+ L QL+VK  FLHG+LEE +YM+QP GF   GK+  VC LKKSLYGLKQSPRQW
Sbjct: 294 VSALDMKLEQLNVKIAFLHGNLEEQVYMSQPDGFLEVGKKNHVCLLKKSLYGLKQSPRQW 353

Query: 585 YKRFDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LS 764
           YKRFD+FM    + R+ +D CVY  KL  G YIYLLLYVDDMLIA+K+   I  LK  LS
Sbjct: 354 YKRFDAFMISYNFVRNEFDNCVYSRKLSDGSYIYLLLYVDDMLIAAKSKTDIDALKAMLS 413

Query: 765 NEFEMKDLG 791
           +EFEMKDLG
Sbjct: 414 SEFEMKDLG 422


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  295 bits (755), Expect = 2e-88
 Identities = 159/247 (64%), Positives = 190/247 (76%), Gaps = 5/247 (2%)
 Frame = +3

Query: 66   ILAYALPV--EVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTGKK 239
            I+AYAL V  E+  +  PSTY +A +S + +RW  AM DEM+SL KN +WEL KLP  KK
Sbjct: 708  IVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLEKNHSWELEKLPKEKK 767

Query: 240  AIGCK*VYA-KEG-SLSEGVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLALVA 413
             I CK ++  KEG S S+  R+KARLVAKGY+Q+ G+D+N+VFSPVVKHSSIR LL++VA
Sbjct: 768  PIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVA 827

Query: 414  QYDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQWYK 590
             +D +L Q+DVKT FLHG+LEE IYM QP GF   GKE LVC+LKKSLYGLKQSPRQWYK
Sbjct: 828  MHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYK 887

Query: 591  RFDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LSNE 770
            RFDSFM  + + RS YD CVYL K+  G  IYLLLYVDDMLIA+K+   IAKLK  LS+E
Sbjct: 888  RFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSE 946

Query: 771  FEMKDLG 791
            FEMKDLG
Sbjct: 947  FEMKDLG 953


>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Capsicum
            baccatum]
          Length = 1526

 Score =  295 bits (755), Expect = 6e-88
 Identities = 149/246 (60%), Positives = 185/246 (75%), Gaps = 5/246 (2%)
 Frame = +3

Query: 69   LAYALPV--EVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTGKKA 242
            +AYAL V  E+ ED  P  Y EA    +S +W  AM++E++SL KN+TW+L  LP GK+ 
Sbjct: 455  IAYALTVAQEMGEDGEPKNYSEAISGDDSAKWTAAMQEEVESLLKNETWDLVMLPEGKRV 514

Query: 243  IGCK*VYAKEGSLS--EGVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLALVAQ 416
            I CK ++ ++  +   E  R+KAR V +G+ Q EG+D+NEVFSPVV+HSSIR+LLALVA 
Sbjct: 515  ISCKWIFKRKEGIPGVENARYKARFVVRGFDQQEGIDFNEVFSPVVRHSSIRVLLALVAL 574

Query: 417  YDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQWYKR 593
            YDL+L QLDVKT FLHG+LEE IY+ QP GF   GKE  VC+LKKSLYGLKQSPRQWYKR
Sbjct: 575  YDLELEQLDVKTAFLHGNLEEEIYIQQPEGFVVPGKENHVCRLKKSLYGLKQSPRQWYKR 634

Query: 594  FDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LSNEF 773
            FDSFMTG GY+RS YD CVY  KL  G  +YLLLYVDDMLIA+++   + KLK  L++EF
Sbjct: 635  FDSFMTGHGYSRSSYDNCVYFQKLSDGSLVYLLLYVDDMLIAARDKTLVDKLKVQLNSEF 694

Query: 774  EMKDLG 791
            +MKDLG
Sbjct: 695  DMKDLG 700


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score =  290 bits (742), Expect = 7e-88
 Identities = 156/247 (63%), Positives = 187/247 (75%), Gaps = 5/247 (2%)
 Frame = +3

Query: 66   ILAYALPV--EVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTGKK 239
            I+AYAL V  E+  +  PS Y EA +S + +RW   M DEM+SL KN TWEL KLP  KK
Sbjct: 541  IVAYALSVAEEIEGNAEPSIYSEAIVSDDCNRWITTMHDEMESLEKNHTWELVKLPKEKK 600

Query: 240  AIGCK*VYA-KEG-SLSEGVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLALVA 413
            +I CK ++  KEG S S+  R+KARLVAKGY+Q+  +D+N+VFSP+VKHSSIR LL++VA
Sbjct: 601  SIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPSIDFNDVFSPIVKHSSIRTLLSIVA 660

Query: 414  QYDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQWYK 590
             +D +L Q+DVKT FLHG+LEE IYM QP GF   GKE LVC+LKKSLYGLKQSPRQWYK
Sbjct: 661  MHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYK 720

Query: 591  RFDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LSNE 770
            RFDSFM  + + RS YD CVYL K+  G  IYLLLYVDDMLIA+K+   I KLK  LS+E
Sbjct: 721  RFDSFMLSQKFRRSNYDNCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIEKLKAQLSSE 779

Query: 771  FEMKDLG 791
            FEMKDLG
Sbjct: 780  FEMKDLG 786


>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
          Length = 576

 Score =  281 bits (718), Expect = 9e-88
 Identities = 150/239 (62%), Positives = 180/239 (75%), Gaps = 4/239 (1%)
 Frame = +3

Query: 87  VEVIEDTI-PSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTGKKAIGCK*VY 263
           VE +E+T+ P+TY EA +S + + W  AM++EMQSL KN TW+L  LP  KK + CK ++
Sbjct: 130 VEQVENTLEPATYTEAVVSGDRENWISAMQEEMQSLEKNGTWKLVHLPKQKKPVHCKWIF 189

Query: 264 A-KEG-SLSEGVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLALVAQYDLDLVQ 437
             KEG S SE  RFKARLVAKG++Q+ GVDYN+VFSPVVKHSSIR   ++VA  DL+L Q
Sbjct: 190 KRKEGLSPSEPPRFKARLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAMDDLELKQ 249

Query: 438 LDVKTVFLHGDLE-EIYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQWYKRFDSFMTG 614
           LDVKT FLHG+LE EIYM QP GF   GKE+ VCKLK+SLYGLKQSPRQWYKRFDSFM  
Sbjct: 250 LDVKTTFLHGELEDEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLS 309

Query: 615 KGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LSNEFEMKDLG 791
            G+  S +D CVY+ K   G  IYLLLYVDDMLIA+K+   I  LK  LS+EF+MKDLG
Sbjct: 310 HGFKWSEFDSCVYI-KFVNGSPIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLG 367


>gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 503

 Score =  278 bits (712), Expect = 1e-87
 Identities = 136/211 (64%), Positives = 167/211 (79%), Gaps = 3/211 (1%)
 Frame = +3

Query: 168 MEDEMQSLHKNDTWELAKLPTGKKAIGCK*VYAKEGSLS--EGVRFKARLVAKGYAQLEG 341
           M +E++SLHKN+TW L KLP GK+ + CK +Y K+  +   E  R KARLV KG+ Q EG
Sbjct: 1   MNEEIESLHKNNTWNLTKLPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEG 60

Query: 342 VDYNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAG 518
           +D+NE+FSPVV+H+SIRILLA VA +DL+L QLDVKT FLHG+LEE IYM QP GF    
Sbjct: 61  IDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPS 120

Query: 519 KEELVCKLKKSLYGLKQSPRQWYKRFDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLY 698
           KE LVC+LKKSLYGLKQ+PRQWYK+FDSFM G+GY+RS YD C+Y  + P G +IYLLLY
Sbjct: 121 KEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLY 180

Query: 699 VDDMLIASKNSVTIAKLKG*LSNEFEMKDLG 791
           VDDMLIAS++   I+KLK  L+NEFEMK+LG
Sbjct: 181 VDDMLIASRDKSLISKLKAQLNNEFEMKELG 211


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  291 bits (746), Expect = 4e-87
 Identities = 157/247 (63%), Positives = 187/247 (75%), Gaps = 5/247 (2%)
 Frame = +3

Query: 66   ILAYALPV--EVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTGKK 239
            I+AYAL V  E+  +  PSTY EA +S + +RW  AM DEM+SL KN TWE  KLP  KK
Sbjct: 834  IVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKK 893

Query: 240  AIGCK*VYA-KEG-SLSEGVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLALVA 413
             I CK ++  KEG S S+  R+KARLVAKGY+Q+ G+D+N+VFSP++KHSSIR LL +VA
Sbjct: 894  PIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVA 953

Query: 414  QYDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQWYK 590
             +D +L Q+DVKT FLHG+LEE IYM QP GF   GKE LVC+LKKSLYGLKQSPRQWYK
Sbjct: 954  MHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYK 1013

Query: 591  RFDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LSNE 770
            RFDSFM  + + RS YD CVYL K+  G  IYLLLYVDDMLIA+K+   IAKLK  LS+E
Sbjct: 1014 RFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSE 1072

Query: 771  FEMKDLG 791
            F MKDLG
Sbjct: 1073 FGMKDLG 1079


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  291 bits (746), Expect = 5e-87
 Identities = 157/247 (63%), Positives = 187/247 (75%), Gaps = 5/247 (2%)
 Frame = +3

Query: 66   ILAYALPV--EVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTGKK 239
            I+AYAL V  E+  +  PSTY EA +S + +RW  AM DEM+SL KN TWE  KLP  KK
Sbjct: 834  IVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLKKNHTWEFVKLPKEKK 893

Query: 240  AIGCK*VYA-KEG-SLSEGVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLALVA 413
             I CK ++  KEG S S+  R+KARLVAKGY+Q+ G+D+N+VFSP++KHSSIR LL +VA
Sbjct: 894  PIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVA 953

Query: 414  QYDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQWYK 590
             +D +L Q+DVKT FLHG+LEE IYM QP GF   GKE LVC+LKKSLYGLKQSPRQWYK
Sbjct: 954  MHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYK 1013

Query: 591  RFDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LSNE 770
            RFDSFM  + + RS YD CVYL K+  G  IYLLLYVDDMLIA+K+   IAKLK  LS+E
Sbjct: 1014 RFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSE 1072

Query: 771  FEMKDLG 791
            F MKDLG
Sbjct: 1073 FGMKDLG 1079


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  290 bits (743), Expect = 8e-87
 Identities = 160/247 (64%), Positives = 187/247 (75%), Gaps = 5/247 (2%)
 Frame = +3

Query: 66   ILAYALPV-EVIEDTI-PSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTGKK 239
            I+AYAL V E IE    PSTY EA +S + +RW  AM DEM+SL KN TWEL KLP  KK
Sbjct: 771  IVAYALSVAEKIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKK 830

Query: 240  AIGCK*VYA-KEG-SLSEGVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLALVA 413
             I CK ++  KEG S S+  R+KARLVAKGY+Q+ G+D+N+VFSPVVKHSSIR LL +VA
Sbjct: 831  PIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLGIVA 890

Query: 414  QYDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQWYK 590
             +D +L Q++VKT FLHG+LEE IYM QP GF   GKE LVC+LKKSLYGLKQSPRQWYK
Sbjct: 891  MHDYELEQMNVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYK 950

Query: 591  RFDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LSNE 770
            RFDSFM  + +  S YD CVYL K+  G  IYLLLYVDDMLIA+K+   I KLK  LS+E
Sbjct: 951  RFDSFMLSQKFRISNYDSCVYL-KVVDGSVIYLLLYVDDMLIAAKDKSEIEKLKAQLSSE 1009

Query: 771  FEMKDLG 791
            FEMKDLG
Sbjct: 1010 FEMKDLG 1016


>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
          Length = 1007

 Score =  286 bits (733), Expect = 2e-86
 Identities = 152/247 (61%), Positives = 186/247 (75%), Gaps = 5/247 (2%)
 Frame = +3

Query: 66   ILAYALPV--EVIEDTIPSTYREAEMSSESDRWRGAMEDEMQSLHKNDTWELAKLPTGKK 239
            I+AYAL V  ++  +  PSTY EA +S + +RW  AM DEM+SL KN TWEL KLP  KK
Sbjct: 581  IVAYALSVAEDIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTWELVKLPKEKK 640

Query: 240  AIGCK*VYAKEGSLS--EGVRFKARLVAKGYAQLEGVDYNEVFSPVVKHSSIRILLALVA 413
             I CK ++ ++  +S  +   +KARLVAKGY+Q+ G+D+N+VFSPVVKHSSIR LL++VA
Sbjct: 641  PIRCKWIFKRKKGISPSDEAMYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVA 700

Query: 414  QYDLDLVQLDVKTVFLHGDLEE-IYMTQPTGFRAAGKEELVCKLKKSLYGLKQSPRQWYK 590
             +D +L Q+DVKT FLHG+LEE IYM Q  GF   GKE LVC+LKKSLYGLKQS RQWYK
Sbjct: 701  MHDYELEQMDVKTAFLHGELEEDIYMEQSEGFVVPGKENLVCRLKKSLYGLKQSSRQWYK 760

Query: 591  RFDSFMTGKGYTRSPYDPCVYLHKLPGGEYIYLLLYVDDMLIASKNSVTIAKLKG*LSNE 770
            RFDSFM  + + RS YD CVY+ K+  G  IYLLLYVDDMLIA+K+   IAKLK  LS+E
Sbjct: 761  RFDSFMLSQKFRRSNYDSCVYV-KVADGSAIYLLLYVDDMLIAAKDKSEIAKLKAQLSSE 819

Query: 771  FEMKDLG 791
            FEMKDLG
Sbjct: 820  FEMKDLG 826