BLASTX nr result

ID: Ophiopogon22_contig00020532 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00020532
         (731 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020267547.1| zinc finger CCCH domain-containing protein 3...    58   4e-06

>ref|XP_020267547.1| zinc finger CCCH domain-containing protein 30 [Asparagus
           officinalis]
 gb|ONK68019.1| uncharacterized protein A4U43_C05F6340 [Asparagus officinalis]
          Length = 500

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 42/95 (44%), Positives = 49/95 (51%), Gaps = 18/95 (18%)
 Frame = +1

Query: 4   ELLIKILSDPVMVQRLLSEFG--APKQTTAPQLQSAATVQTAGPSWPLPQPVVTTITAP- 174
           ELLI ILSDPVMV+RL SE+G   P+QT  PQ Q   + Q A    P+ Q VV T  AP 
Sbjct: 265 ELLINILSDPVMVKRLASEYGDSQPQQTPPPQSQPVVSAQAAYSRPPI-QSVVNTQAAPS 323

Query: 175 ---------------PSRPQVQPVLTATAAPPPRS 234
                          PS     PV+TAT A P R+
Sbjct: 324 RATTLQPNVSKSPAIPSWSATPPVVTATVAGPSRA 358


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