BLASTX nr result

ID: Ophiopogon22_contig00019652 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00019652
         (463 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009394544.1| PREDICTED: uncharacterized membrane protein ...    64   4e-09

>ref|XP_009394544.1| PREDICTED: uncharacterized membrane protein At1g16860-like [Musa
           acuminata subsp. malaccensis]
          Length = 404

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 47/120 (39%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
 Frame = -2

Query: 420 YTGGNVRRSGDLGKMLNV---DPNAAXXXXXXXXSGPLRKAAATSSS-------SGPLSQ 271
           YTGG+VR+SG+LGKM ++   DP A         SGPL ++A +S S       SGPL+Q
Sbjct: 37  YTGGDVRKSGELGKMFDIPPADPGAPSRPVSKSHSGPLARSAPSSGSGPVPRKTSGPLAQ 96

Query: 270 IPPTGLITXXXXXXXXXXXXXXXXXXRKRAHEKKDYGTSVTEVKDRGAHFRFAVPRAVAW 91
           IPPTGLIT                  RK   E   YG +VT  ++    F F V R   W
Sbjct: 97  IPPTGLITSGPARSSGGQPELSPRPARKNKGEA--YGGAVTAPEEEA--FAFGVSRVWRW 152


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