BLASTX nr result

ID: Ophiopogon22_contig00019598 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00019598
         (780 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020242146.1| U11/U12 small nuclear ribonucleoprotein 48 k...    96   1e-18
ref|XP_020242145.1| U11/U12 small nuclear ribonucleoprotein 48 k...    96   1e-18

>ref|XP_020242146.1| U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2
           [Asparagus officinalis]
 gb|ONK60771.1| uncharacterized protein A4U43_C08F22440 [Asparagus officinalis]
          Length = 627

 Score = 95.5 bits (236), Expect = 1e-18
 Identities = 50/97 (51%), Positives = 63/97 (64%)
 Frame = -1

Query: 780 FQHGKYEVSETRLDSSNKAKNLHFCSNDGSRIINDLQYPKNEKRFKYSEQQEGHERWKHK 601
           FQHG+YE SE +L S    + L + +ND S++IN LQ  + E+R  Y E QEGH R KHK
Sbjct: 532 FQHGRYEASERKLASPGYDRPLLY-NNDRSKVINVLQNSRKEQRHDYREHQEGHWRRKHK 590

Query: 600 EEKNSGPRNTSIFRPHAILHDQFTHLSEQGDPRAHNS 490
           +EKN    N +I +    L DQFTHL EQGD RAH+S
Sbjct: 591 KEKNYWSENPTIAQKRTDLRDQFTHLGEQGDTRAHDS 627


>ref|XP_020242145.1| U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1
           [Asparagus officinalis]
          Length = 643

 Score = 95.5 bits (236), Expect = 1e-18
 Identities = 50/97 (51%), Positives = 63/97 (64%)
 Frame = -1

Query: 780 FQHGKYEVSETRLDSSNKAKNLHFCSNDGSRIINDLQYPKNEKRFKYSEQQEGHERWKHK 601
           FQHG+YE SE +L S    + L + +ND S++IN LQ  + E+R  Y E QEGH R KHK
Sbjct: 548 FQHGRYEASERKLASPGYDRPLLY-NNDRSKVINVLQNSRKEQRHDYREHQEGHWRRKHK 606

Query: 600 EEKNSGPRNTSIFRPHAILHDQFTHLSEQGDPRAHNS 490
           +EKN    N +I +    L DQFTHL EQGD RAH+S
Sbjct: 607 KEKNYWSENPTIAQKRTDLRDQFTHLGEQGDTRAHDS 643


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