BLASTX nr result

ID: Ophiopogon22_contig00019281 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00019281
         (679 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020252976.1| RAP domain-containing protein, chloroplastic...    85   3e-15

>ref|XP_020252976.1| RAP domain-containing protein, chloroplastic [Asparagus
           officinalis]
 ref|XP_020252977.1| RAP domain-containing protein, chloroplastic [Asparagus
           officinalis]
          Length = 659

 Score = 84.7 bits (208), Expect = 3e-15
 Identities = 44/88 (50%), Positives = 54/88 (61%)
 Frame = -3

Query: 311 MEAYLTTLLPQKCYXXXXXXXXXXXXXXXXXXXXXXXSGFCNPKLELSLIRRKVCECRVG 132
           MEA +++LLPQ+CY                        GFCNPKLEL+   R+V  C VG
Sbjct: 1   MEASMSSLLPQRCYPSLNSPLKPIKIYSNTKPTS----GFCNPKLELTFQSRRVYTCGVG 56

Query: 131 SSSVDLRVEDEQEDEEDPTWKLQFLGEI 48
           SSSVDL+ E+  ++EEDPTWKLQFLGEI
Sbjct: 57  SSSVDLKAEESPKEEEDPTWKLQFLGEI 84


Top