BLASTX nr result
ID: Ophiopogon22_contig00018567
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00018567
(467 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OTF92145.1| putative ribonuclease H-like domain-containing pr... 225 2e-71
gb|KYP63121.1| Retrovirus-related Pol polyprotein from transposo... 219 3e-68
gb|KYP50579.1| Retrovirus-related Pol polyprotein from transposo... 213 1e-65
gb|KYP31352.1| Retrovirus-related Pol polyprotein from transposo... 209 2e-65
gb|KYP42945.1| Retrovirus-related Pol polyprotein from transposo... 215 5e-65
gb|PNX95528.1| putative gag/pol polyprotein [Trifolium pratense] 224 6e-65
gb|KYP59969.1| Retrovirus-related Pol polyprotein from transposo... 209 2e-64
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 220 2e-63
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 220 2e-63
gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposo... 220 2e-63
gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposo... 220 2e-63
gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposo... 218 6e-63
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 218 6e-63
gb|KYP45754.1| Retrovirus-related Pol polyprotein from transposo... 207 8e-63
gb|KYP54197.1| Retrovirus-related Pol polyprotein from transposo... 208 3e-62
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 213 4e-61
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 213 4e-61
gb|AAK29467.1| polyprotein-like [Solanum chilense] 212 8e-61
gb|PRQ53540.1| putative RNA-directed DNA polymerase [Rosa chinen... 199 1e-60
gb|KYP73265.1| Retrovirus-related Pol polyprotein from transposo... 208 1e-60
>gb|OTF92145.1| putative ribonuclease H-like domain-containing protein [Helianthus
annuus]
Length = 268
Score = 225 bits (573), Expect = 2e-71
Identities = 101/155 (65%), Positives = 125/155 (80%)
Frame = +1
Query: 1 KSAAPSKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCF 180
KS P +R L+L+H+DVCGPM +LGG YFVTFIDD+SRK+WAYT+ SKD+VLD F
Sbjct: 40 KSHPPHRRDNILDLIHSDVCGPMKTRTLGGCLYFVTFIDDHSRKVWAYTLKSKDQVLDVF 99
Query: 181 KQFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNR 360
KQFHA VER+T LK +R+DNGGEY GPF+ YC+E GIRH++T PKTPQ NGLAERMNR
Sbjct: 100 KQFHALVERQTEKKLKCIRTDNGGEYIGPFDAYCREKGIRHQKTPPKTPQLNGLAERMNR 159
Query: 361 TICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
T+ ER+R +LSHA LP +FWGEA+ T V++IN +P
Sbjct: 160 TLAERVRCLLSHAGLPNSFWGEALNTVVNVINRTP 194
>gb|KYP63121.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 344
Score = 219 bits (558), Expect = 3e-68
Identities = 103/155 (66%), Positives = 126/155 (81%)
Frame = +1
Query: 1 KSAAPSKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCF 180
+S+ P +R L+LVHTDVC M +S+GGA YFVTFIDD+SRK+W + + SKD+VLD F
Sbjct: 147 RSSPPVRRKNILDLVHTDVCS-MSEKSIGGALYFVTFIDDHSRKVWLHLLKSKDQVLDAF 205
Query: 181 KQFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNR 360
K+FHA VERETG +K VRSDNGGEY GPFE YCK+HGIR E+T PKTPQ NGLA+RMNR
Sbjct: 206 KEFHALVERETGRKIKCVRSDNGGEYRGPFETYCKKHGIRLEKTPPKTPQLNGLAKRMNR 265
Query: 361 TICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
TI ER+R +LSHAKLPK+FWGEA+ VD++N +P
Sbjct: 266 TIEERVRCVLSHAKLPKSFWGEAIMAVVDIVNLTP 300
>gb|KYP50579.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 355
Score = 213 bits (541), Expect = 1e-65
Identities = 99/155 (63%), Positives = 122/155 (78%)
Frame = +1
Query: 1 KSAAPSKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCF 180
K PS+++ LELVH+DVCGP+ V+S GA YFVTFI D SRKLW Y + +KD+VL+ F
Sbjct: 52 KKHPPSRKSELLELVHSDVCGPLKVKSFSGALYFVTFIYDCSRKLWVYALKTKDQVLEKF 111
Query: 181 KQFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNR 360
K+FHA VER+ G LK +R+DNGGEY GPF+ YCK+HGI HE+T PKTPQ NGLA+RMNR
Sbjct: 112 KEFHALVERQLGKKLKRIRTDNGGEYCGPFDVYCKQHGIAHEKTPPKTPQLNGLAKRMNR 171
Query: 361 TICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
T+ ER+R MLS AKL K FWGEA+ TA+ +IN SP
Sbjct: 172 TLIERVRCMLSEAKLSKHFWGEALYTAIHVINLSP 206
>gb|KYP31352.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 259
Score = 209 bits (532), Expect = 2e-65
Identities = 99/151 (65%), Positives = 121/151 (80%)
Frame = +1
Query: 13 PSKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCFKQFH 192
PS+++ LELVH+DVCGP+ V+S GA YFVTFIDD SRKLW Y + KD+VL+ FK+FH
Sbjct: 56 PSRKSELLELVHSDVCGPLKVKSFSGALYFVTFIDDCSRKLWVYALQRKDQVLEKFKEFH 115
Query: 193 AAVERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNRTICE 372
A VER++G LK +R+DNGGEY GPF+ YCK+ GIRHE+T PKTPQ N AERMNRT+ E
Sbjct: 116 ALVERQSGKKLKRIRTDNGGEYRGPFDVYCKQQGIRHEKTPPKTPQLN--AERMNRTLLE 173
Query: 373 RMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
R+R MLS AKLPK FWGEA+ TAV +IN +P
Sbjct: 174 RVRCMLSDAKLPKHFWGEALYTAVHVINLTP 204
>gb|KYP42945.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 497
Score = 215 bits (548), Expect = 5e-65
Identities = 100/155 (64%), Positives = 123/155 (79%)
Frame = +1
Query: 1 KSAAPSKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCF 180
K PS++ L+LVH+DVCGP+ V++ GA YFVTFIDD SRKLW Y +S KD+VL+ F
Sbjct: 255 KKHPPSRKLELLKLVHSDVCGPLKVKAFSGALYFVTFIDDCSRKLWVYALSRKDQVLEGF 314
Query: 181 KQFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNR 360
KQFHA VER++G LK +R+DNGGEY GPF+ YCK+HGI H++T PKTPQ NGLAERMNR
Sbjct: 315 KQFHALVERQSGKKLKRIRTDNGGEYCGPFDVYCKKHGIAHKKTPPKTPQLNGLAERMNR 374
Query: 361 TICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
T+ ER+R MLS AKLPK FWGEA+ T V +IN +P
Sbjct: 375 TLLERVRCMLSDAKLPKHFWGEALYTVVHVINLTP 409
>gb|PNX95528.1| putative gag/pol polyprotein [Trifolium pratense]
Length = 1339
Score = 224 bits (571), Expect = 6e-65
Identities = 101/155 (65%), Positives = 126/155 (81%)
Frame = +1
Query: 1 KSAAPSKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCF 180
KS+ P +++ L+LVH+DVCGPM SLGGA YFVTFIDDYSRK WAYT+ +KD+VLD F
Sbjct: 475 KSSEPKRKSEVLDLVHSDVCGPMKTRSLGGAYYFVTFIDDYSRKTWAYTLKTKDQVLDTF 534
Query: 181 KQFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNR 360
K F A+VERETG LK +R++NGGEY GPF+KYC++ GIRH+++ PKTPQ NGLAERMNR
Sbjct: 535 KSFQASVERETGKKLKCIRTNNGGEYVGPFDKYCQDQGIRHQKSPPKTPQLNGLAERMNR 594
Query: 361 TICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
T+ ERMR +LS + LPK FWGEA+ T V L+N +P
Sbjct: 595 TLVERMRCLLSQSMLPKYFWGEALNTVVHLLNLTP 629
>gb|KYP59969.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 345
Score = 209 bits (533), Expect = 2e-64
Identities = 98/155 (63%), Positives = 120/155 (77%)
Frame = +1
Query: 1 KSAAPSKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCF 180
K PS+++ L+LVH+DVCGP+ V+S GA YFVTFIDD SRKLW Y + KD+VL+ F
Sbjct: 44 KKHPPSRKSELLQLVHSDVCGPLKVKSFSGALYFVTFIDDCSRKLWVYALQRKDQVLERF 103
Query: 181 KQFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNR 360
KQFHA VER++G LK +R+DN GEY GPF+ YCK+HGI HE+T PKTPQ NGLA RMNR
Sbjct: 104 KQFHALVERQSGKKLKPIRTDNDGEYCGPFDVYCKQHGIAHEKTPPKTPQLNGLAARMNR 163
Query: 361 TICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
T+ ER+R MLS AKL K FWGE + TAV +IN +P
Sbjct: 164 TLLERVRCMLSDAKLHKHFWGETLYTAVHVINLTP 198
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 220 bits (560), Expect = 2e-63
Identities = 103/155 (66%), Positives = 123/155 (79%)
Frame = +1
Query: 1 KSAAPSKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCF 180
K PSK++ LELVH+DVCGP+ V+S G YFVTFIDD SRKLW Y + +KD+VL F
Sbjct: 463 KKHPPSKKSELLELVHSDVCGPLKVKSFTGTIYFVTFIDDCSRKLWVYALKTKDQVLAKF 522
Query: 181 KQFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNR 360
K+FH VER++G LK +R+DNGGEY GPF+ YCK+HGIRHE+T PKTPQ NGLAERMNR
Sbjct: 523 KEFHVLVERQSGKKLKCIRTDNGGEYCGPFDAYCKQHGIRHEKTPPKTPQLNGLAERMNR 582
Query: 361 TICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
T+ ER+R MLS AKLPK FWGEA+ TAV +IN SP
Sbjct: 583 TLIERVRCMLSKAKLPKHFWGEALYTAVHVINLSP 617
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 220 bits (560), Expect = 2e-63
Identities = 101/154 (65%), Positives = 122/154 (79%)
Frame = +1
Query: 4 SAAPSKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCFK 183
S P++++ L+L+H+DVCGPM V SLGGA YFVTFIDDYSRKLW YT+ K VL FK
Sbjct: 467 SHPPTRKSEPLDLIHSDVCGPMKVRSLGGASYFVTFIDDYSRKLWVYTLKHKSDVLGVFK 526
Query: 184 QFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNRT 363
+FHA VER+TG LK +R+DNGGEY GPF++YC+ +GIRH++T PK PQ NGLAERMNRT
Sbjct: 527 EFHALVERQTGKKLKCIRTDNGGEYCGPFDEYCRRYGIRHQKTPPKIPQLNGLAERMNRT 586
Query: 364 ICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
I ER+R ML AKLP +FW EAV TAV +IN SP
Sbjct: 587 IMERVRCMLDDAKLPSSFWAEAVSTAVHVINLSP 620
>gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 220 bits (560), Expect = 2e-63
Identities = 104/155 (67%), Positives = 125/155 (80%)
Frame = +1
Query: 1 KSAAPSKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCF 180
+S+ P +R L+LVHTDVC M +S+GGA YFVTFIDD+SRK+W + + SKD+VLD F
Sbjct: 455 RSSPPVRRKNILDLVHTDVCS-MSEKSIGGALYFVTFIDDHSRKVWLHLLKSKDQVLDAF 513
Query: 181 KQFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNR 360
K+FHA VERETG +K VRSDNGGEY GPFE YCK+HGIR E+T PKTPQ NGLAERMNR
Sbjct: 514 KEFHALVERETGRKIKCVRSDNGGEYRGPFETYCKKHGIRLEKTPPKTPQLNGLAERMNR 573
Query: 361 TICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
TI ER+R +LSHAKLPK FWGEA+ VD++N +P
Sbjct: 574 TIEERVRCVLSHAKLPKLFWGEAIMAVVDIVNLTP 608
>gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 220 bits (560), Expect = 2e-63
Identities = 104/155 (67%), Positives = 125/155 (80%)
Frame = +1
Query: 1 KSAAPSKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCF 180
+S+ P +R L+LVHTDVC M +S+GGA YFVTFIDD+SRK+W + + SKD+VLD F
Sbjct: 455 RSSPPVRRKNILDLVHTDVCS-MSEKSIGGALYFVTFIDDHSRKVWLHLLKSKDQVLDAF 513
Query: 181 KQFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNR 360
K+FHA VERETG +K VRSDNGGEY GPFE YCK+HGIR E+T PKTPQ NGLAERMNR
Sbjct: 514 KEFHALVERETGRKIKCVRSDNGGEYRGPFETYCKKHGIRLEKTPPKTPQLNGLAERMNR 573
Query: 361 TICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
TI ER+R +LSHAKLPK FWGEA+ VD++N +P
Sbjct: 574 TIEERVRCVLSHAKLPKLFWGEAIMAVVDIVNLTP 608
>gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1314
Score = 218 bits (556), Expect = 6e-63
Identities = 101/149 (67%), Positives = 121/149 (81%)
Frame = +1
Query: 19 KRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCFKQFHAA 198
+R L+LVH+DVC + S+GGA+YFVTFIDD+SRK+W Y + +KD+VL FK+FHA
Sbjct: 471 RRKHILDLVHSDVCSTSE-RSIGGAQYFVTFIDDHSRKVWVYPLKTKDQVLQAFKEFHAL 529
Query: 199 VERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNRTICERM 378
VER TG LK +R+DNGGEY GPFE YCK HGIRHE+ PKTPQ NG+AERMNRTI E++
Sbjct: 530 VERATGRKLKCIRTDNGGEYLGPFEYYCKTHGIRHEKVPPKTPQMNGVAERMNRTIAEKV 589
Query: 379 RSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
RSMLSHAK+PK+FWGEAV TA DLIN SP
Sbjct: 590 RSMLSHAKIPKSFWGEAVLTAADLINLSP 618
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 218 bits (556), Expect = 6e-63
Identities = 103/155 (66%), Positives = 121/155 (78%)
Frame = +1
Query: 1 KSAAPSKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCF 180
K PS+R L+LVH+DVCGP +SLGGARYFVTFIDD+SRK W YT+ +KD+V F
Sbjct: 469 KRFPPSRRQNVLDLVHSDVCGPFK-KSLGGARYFVTFIDDHSRKTWVYTLKTKDQVFQVF 527
Query: 181 KQFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNR 360
KQF VERETG LK +R+DNGGEY G F+ YCKEHGIRH+ T PKTPQ NGLAERMNR
Sbjct: 528 KQFLTLVERETGKKLKCIRTDNGGEYQGQFDAYCKEHGIRHQFTPPKTPQLNGLAERMNR 587
Query: 361 TICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
T+ ER R +LSH+KLPK FWGEA+ TA ++NHSP
Sbjct: 588 TLIERTRCLLSHSKLPKAFWGEALVTAAYVLNHSP 622
>gb|KYP45754.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 427
Score = 207 bits (528), Expect = 8e-63
Identities = 97/155 (62%), Positives = 118/155 (76%)
Frame = +1
Query: 1 KSAAPSKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCF 180
K PS++ L LVH+DVCGP+ V+S G YFVTFIDD SRKLW Y + KD+VL+ F
Sbjct: 174 KKHPPSRKLELLNLVHSDVCGPLKVKSFSGVLYFVTFIDDCSRKLWVYALQRKDQVLERF 233
Query: 181 KQFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNR 360
KQFHA VER++G LK + +DNGGEY GPF+ YCK+HGI HE+T KTPQ NGLAERMN+
Sbjct: 234 KQFHALVERQSGKKLKHIHTDNGGEYCGPFDVYCKQHGIAHEKTPLKTPQLNGLAERMNK 293
Query: 361 TICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
T+ ER+R MLS AKLPK FWGEA+ T V +IN +P
Sbjct: 294 TLLERVRCMLSDAKLPKHFWGEALYTTVHVINLTP 328
>gb|KYP54197.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 512
Score = 208 bits (530), Expect = 3e-62
Identities = 98/155 (63%), Positives = 120/155 (77%)
Frame = +1
Query: 1 KSAAPSKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCF 180
K PS+++ L+LVH+DVCGP+ V+S GA YFVTFIDD SRKLW Y + KD+VL+ F
Sbjct: 124 KKHLPSRKSELLQLVHSDVCGPLKVKSFSGALYFVTFIDDCSRKLWVYALQRKDQVLERF 183
Query: 181 KQFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNR 360
KQFHA VER++G LK +R+DNG EY GPF+ YCK+HGI HE+T PKTPQ NGL ERMNR
Sbjct: 184 KQFHALVERQSGKKLKHIRTDNGSEYCGPFDVYCKQHGIAHEKTPPKTPQLNGLVERMNR 243
Query: 361 TICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
T+ ER+R MLS AKLPK F GEA+ T V +IN +P
Sbjct: 244 TLLERVRYMLSDAKLPKHFLGEALYTVVHVINLTP 278
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 213 bits (542), Expect = 4e-61
Identities = 92/155 (59%), Positives = 129/155 (83%)
Frame = +1
Query: 1 KSAAPSKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCF 180
K+ +++ L+LV++DVCGPM ++LGG+ YFVTFIDD+SRK+W YT+ +KD+VLD F
Sbjct: 351 KTLRYTRKPGMLDLVYSDVCGPMKTKTLGGSLYFVTFIDDHSRKIWVYTLKTKDQVLDVF 410
Query: 181 KQFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNR 360
KQFHA VER++G LK +R+DNGGEY+ PF++YC++HGIRH++T PKTPQ NGLAERMNR
Sbjct: 411 KQFHALVERQSGEKLKCIRTDNGGEYSSPFDEYCRQHGIRHQKTSPKTPQLNGLAERMNR 470
Query: 361 TICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
T+ ER+R +LS ++LP++FWGEA+ T V ++N +P
Sbjct: 471 TLVERVRCLLSQSQLPRSFWGEALNTVVHVLNLTP 505
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease
emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
Length = 1328
Score = 213 bits (542), Expect = 4e-61
Identities = 100/150 (66%), Positives = 122/150 (81%), Gaps = 1/150 (0%)
Frame = +1
Query: 19 KRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCFKQFHAA 198
++ L+LV++DVCGPM++ES+GG +YFVTFIDD SRKLW Y + +KD+V F++FHA
Sbjct: 476 RKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHAL 535
Query: 199 VERETGLSLKAVRSDNGGEYTG-PFEKYCKEHGIRHERTVPKTPQQNGLAERMNRTICER 375
VERETG LK +RSDNGGEYT FE+YC HGIRHE+TVP TPQ NG+AERMNRTI E+
Sbjct: 536 VERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEK 595
Query: 376 MRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
+RSML AKLPK+FWGEAV+TA LIN SP
Sbjct: 596 VRSMLRMAKLPKSFWGEAVQTACYLINRSP 625
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 212 bits (540), Expect = 8e-61
Identities = 100/150 (66%), Positives = 121/150 (80%), Gaps = 1/150 (0%)
Frame = +1
Query: 19 KRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCFKQFHAA 198
+++ L+LV++DVCGPM++ES+GG +YFVTFIDD SRKLW Y +KD+V F++FHA
Sbjct: 477 RKSNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYIFRAKDQVFQVFQKFHAL 536
Query: 199 VERETGLSLKAVRSDNGGEYTG-PFEKYCKEHGIRHERTVPKTPQQNGLAERMNRTICER 375
VERETG K +R+DNGGEYT FE+YC HGIRHE+TVP TPQ NG+AERMNRTI E+
Sbjct: 537 VERETGRKRKRLRTDNGGEYTSREFEEYCSNHGIRHEKTVPGTPQHNGVAERMNRTIVEK 596
Query: 376 MRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
+RSML AKLPKTFWGEAVRTA LIN SP
Sbjct: 597 VRSMLRMAKLPKTFWGEAVRTACYLINRSP 626
>gb|PRQ53540.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 321
Score = 199 bits (506), Expect = 1e-60
Identities = 92/151 (60%), Positives = 117/151 (77%), Gaps = 1/151 (0%)
Frame = +1
Query: 16 SKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCFKQFHA 195
+++ L+LVH+DVCGPM+VES+G +YFVT+IDD SRK+W Y + +KD+V FK+FHA
Sbjct: 151 TRKENVLDLVHSDVCGPMEVESVGHNKYFVTYIDDASRKVWVYLLKTKDQVFQTFKEFHA 210
Query: 196 AVERETGLSLKAVRSDNGGEYT-GPFEKYCKEHGIRHERTVPKTPQQNGLAERMNRTICE 372
VERETG +LK +RSDNGGEYT F YC +HGI+H +T+P TPQ NG+AERMNRTI E
Sbjct: 211 MVERETGRTLKCIRSDNGGEYTSNEFRDYCSKHGIKHVKTIPGTPQHNGVAERMNRTILE 270
Query: 373 RMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
++RSML A L K FWGEA+ TA LIN +P
Sbjct: 271 KVRSMLKTANLTKKFWGEAMTTACYLINRTP 301
>gb|KYP73265.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 728
Score = 208 bits (530), Expect = 1e-60
Identities = 98/155 (63%), Positives = 117/155 (75%)
Frame = +1
Query: 1 KSAAPSKRTRALELVHTDVCGPMDVESLGGARYFVTFIDDYSRKLWAYTISSKDKVLDCF 180
K PS+++ L LVH DVCGP+ +S GA YFVTFIDD SRKLW Y KD+VL+ F
Sbjct: 440 KKHPPSRKSELLPLVHPDVCGPLKEKSFSGALYFVTFIDDCSRKLWVYVFQRKDQVLERF 499
Query: 181 KQFHAAVERETGLSLKAVRSDNGGEYTGPFEKYCKEHGIRHERTVPKTPQQNGLAERMNR 360
KQFHA VER++G LK + +DNGGEY GPF+ YCK+HGI HE+T PKTPQ NGL ERMNR
Sbjct: 500 KQFHALVERQSGKKLKHIHTDNGGEYCGPFDVYCKQHGIAHEKTPPKTPQLNGLVERMNR 559
Query: 361 TICERMRSMLSHAKLPKTFWGEAVRTAVDLINHSP 465
T+ E +R MLS AKLPK FWGEA+ TAV +IN +P
Sbjct: 560 TLLETVRCMLSDAKLPKHFWGEALYTAVHVINLTP 594