BLASTX nr result

ID: Ophiopogon22_contig00018314 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00018314
         (463 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022253339.1| 40S ribosomal protein S12-like isoform X2 [L...    54   3e-06
ref|XP_022253338.1| 40S ribosomal protein S12-like isoform X1 [L...    54   4e-06
ref|XP_004303247.1| PREDICTED: 40S ribosomal protein S12 isoform...    52   1e-05

>ref|XP_022253339.1| 40S ribosomal protein S12-like isoform X2 [Limulus polyphemus]
          Length = 120

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 27/46 (58%), Positives = 33/46 (71%)
 Frame = +1

Query: 193 ARLCKIDSEGKARKVVGCSCVVVKIGHQFLGSEIWVEASRDFCLVF 330
           A LCKID EGKARK+VGCSCVVVK+G + L    ++ A R  C V+
Sbjct: 78  AGLCKIDKEGKARKIVGCSCVVVKVGKKVL----FLVACRFLCNVY 119


>ref|XP_022253338.1| 40S ribosomal protein S12-like isoform X1 [Limulus polyphemus]
          Length = 133

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 27/46 (58%), Positives = 33/46 (71%)
 Frame = +1

Query: 193 ARLCKIDSEGKARKVVGCSCVVVKIGHQFLGSEIWVEASRDFCLVF 330
           A LCKID EGKARK+VGCSCVVVK+G + L    ++ A R  C V+
Sbjct: 91  AGLCKIDKEGKARKIVGCSCVVVKVGKKVL----FLVACRFLCNVY 132


>ref|XP_004303247.1| PREDICTED: 40S ribosomal protein S12 isoform X3 [Fragaria vesca
           subsp. vesca]
          Length = 125

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 26/34 (76%), Positives = 28/34 (82%), Gaps = 3/34 (8%)
 Frame = +1

Query: 175 PNADVM---ARLCKIDSEGKARKVVGCSCVVVKI 267
           PNA  +   A LCKIDSEGKARKVVGCSCVVVK+
Sbjct: 91  PNAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKV 124


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