BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00018295
         (541 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKU70834.1| Mediator of RNA polymerase II transcription subun...    69   7e-11
ref|XP_020681194.1| mediator of RNA polymerase II transcription ...    69   9e-11
ref|XP_020588481.1| mediator of RNA polymerase II transcription ...    65   2e-09
ref|XP_020265242.1| mediator of RNA polymerase II transcription ...    65   3e-09
ref|XP_020265240.1| mediator of RNA polymerase II transcription ...    65   3e-09
gb|KJB70361.1| hypothetical protein B456_011G069400 [Gossypium r...    61   3e-08
gb|KJB70360.1| hypothetical protein B456_011G069400 [Gossypium r...    61   3e-08
gb|POE85925.1| mediator of rna polymerase ii transcription subun...    58   3e-08
emb|CBI36012.3| unnamed protein product, partial [Vitis vinifera]      61   4e-08
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]    61   5e-08
ref|XP_002282496.1| PREDICTED: mediator of RNA polymerase II tra...    61   6e-08
ref|XP_012455201.1| PREDICTED: mediator of RNA polymerase II tra...    61   6e-08
gb|OVA14465.1| Mediator complex [Macleaya cordata]                     61   8e-08
ref|XP_016701074.1| PREDICTED: mediator of RNA polymerase II tra...    61   8e-08
ref|XP_008774994.1| PREDICTED: mediator of RNA polymerase II tra...    60   1e-07
gb|PPD74763.1| hypothetical protein GOBAR_DD28315 [Gossypium bar...    59   4e-07
ref|XP_009401441.1| PREDICTED: mediator of RNA polymerase II tra...    59   5e-07
gb|POE85923.1| isoform 2 of mediator of rna polymerase ii transc...    58   5e-07
gb|PPR93780.1| hypothetical protein GOBAR_AA26897 [Gossypium bar...    58   1e-06
ref|XP_017647247.1| PREDICTED: mediator of RNA polymerase II tra...    58   1e-06

>gb|PKU70834.1| Mediator of RNA polymerase II transcription subunit 6 [Dendrobium
           catenatum]
          Length = 234

 Score = 68.9 bits (167), Expect = 7e-11
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = -3

Query: 539 GYAPPASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 417
           GYAPPASE E   ED QN + QLP+VDPIIDQGP+KRMKFQ
Sbjct: 194 GYAPPASEAEKGTEDTQNPEAQLPTVDPIIDQGPAKRMKFQ 234


>ref|XP_020681194.1| mediator of RNA polymerase II transcription subunit 6 isoform X1
           [Dendrobium catenatum]
 ref|XP_020681195.1| mediator of RNA polymerase II transcription subunit 6 isoform X2
           [Dendrobium catenatum]
          Length = 257

 Score = 68.9 bits (167), Expect = 9e-11
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = -3

Query: 539 GYAPPASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 417
           GYAPPASE E   ED QN + QLP+VDPIIDQGP+KRMKFQ
Sbjct: 217 GYAPPASEAEKGTEDTQNPEAQLPTVDPIIDQGPAKRMKFQ 257


>ref|XP_020588481.1| mediator of RNA polymerase II transcription subunit 6 [Phalaenopsis
           equestris]
          Length = 257

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 30/41 (73%), Positives = 32/41 (78%)
 Frame = -3

Query: 539 GYAPPASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 417
           GYAPPA E     EDQQN + QLP VDPIIDQGP+KRMKFQ
Sbjct: 217 GYAPPAFEAVNGSEDQQNLEAQLPPVDPIIDQGPAKRMKFQ 257


>ref|XP_020265242.1| mediator of RNA polymerase II transcription subunit 6 isoform X2
           [Asparagus officinalis]
          Length = 267

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = -3

Query: 539 GYAPPASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 417
           GY PP S+GE A EDQQ+T VQ P +DPIIDQGPSKR K+Q
Sbjct: 227 GYVPPTSDGEKAAEDQQSTDVQPPPLDPIIDQGPSKRTKYQ 267


>ref|XP_020265240.1| mediator of RNA polymerase II transcription subunit 6 isoform X1
           [Asparagus officinalis]
 ref|XP_020265241.1| mediator of RNA polymerase II transcription subunit 6 isoform X1
           [Asparagus officinalis]
 gb|ONK70032.1| uncharacterized protein A4U43_C05F29550 [Asparagus officinalis]
          Length = 269

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 29/41 (70%), Positives = 33/41 (80%)
 Frame = -3

Query: 539 GYAPPASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 417
           GY PP S+GE A EDQQ+T VQ P +DPIIDQGPSKR K+Q
Sbjct: 229 GYVPPTSDGEKAAEDQQSTDVQPPPLDPIIDQGPSKRTKYQ 269


>gb|KJB70361.1| hypothetical protein B456_011G069400 [Gossypium raimondii]
          Length = 169

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = -3

Query: 539 GYAPPASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 420
           G+ PP +E E  PE+QQ T+ Q P+VDPIIDQGP+KRMKF
Sbjct: 130 GFVPPTTEAEKEPENQQTTEPQPPAVDPIIDQGPAKRMKF 169


>gb|KJB70360.1| hypothetical protein B456_011G069400 [Gossypium raimondii]
          Length = 183

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = -3

Query: 539 GYAPPASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 420
           G+ PP +E E  PE+QQ T+ Q P+VDPIIDQGP+KRMKF
Sbjct: 144 GFVPPTTEAEKEPENQQTTEPQPPAVDPIIDQGPAKRMKF 183


>gb|POE85925.1| mediator of rna polymerase ii transcription subunit 6 [Quercus
           suber]
          Length = 73

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 29/41 (70%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = -3

Query: 539 GYAPPAS-EGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 420
           GY PPAS + E APE QQ+ +VQ P VDPIIDQGP+KRMKF
Sbjct: 33  GYVPPASADTEKAPEVQQSGEVQPPPVDPIIDQGPAKRMKF 73


>emb|CBI36012.3| unnamed protein product, partial [Vitis vinifera]
          Length = 226

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 29/41 (70%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = -3

Query: 539 GYAPP-ASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 420
           GYAPP  +EGE  PE QQ  + QLP++DPIIDQGPSKRMKF
Sbjct: 186 GYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 226


>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 29/41 (70%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = -3

Query: 539 GYAPP-ASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 420
           GYAPP  +EGE  PE QQ  + QLP++DPIIDQGPSKRMKF
Sbjct: 213 GYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 253


>ref|XP_002282496.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Vitis vinifera]
          Length = 258

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 29/41 (70%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = -3

Query: 539 GYAPP-ASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 420
           GYAPP  +EGE  PE QQ  + QLP++DPIIDQGPSKRMKF
Sbjct: 218 GYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 258


>ref|XP_012455201.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Gossypium raimondii]
 gb|KJB70362.1| hypothetical protein B456_011G069400 [Gossypium raimondii]
 gb|KJB70364.1| hypothetical protein B456_011G069400 [Gossypium raimondii]
          Length = 232

 Score = 60.8 bits (146), Expect = 6e-08
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = -3

Query: 539 GYAPPASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 420
           G+ PP +E E  PE+QQ T+ Q P+VDPIIDQGP+KRMKF
Sbjct: 193 GFVPPTTEAEKEPENQQTTEPQPPAVDPIIDQGPAKRMKF 232


>gb|OVA14465.1| Mediator complex [Macleaya cordata]
          Length = 256

 Score = 60.8 bits (146), Expect = 8e-08
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = -3

Query: 539 GYAPPASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 420
           GY PP SE +   E+QQ T+ QLP +DPIIDQGPSKRMKF
Sbjct: 217 GYVPPTSEADKGTENQQATEPQLPPLDPIIDQGPSKRMKF 256


>ref|XP_016701074.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           6-like [Gossypium hirsutum]
          Length = 256

 Score = 60.8 bits (146), Expect = 8e-08
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = -3

Query: 539 GYAPPASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 420
           G+ PP +E E  PE+QQ T+ Q P+VDPIIDQGP+KRMKF
Sbjct: 217 GFVPPTTEAEKEPENQQTTEPQPPAVDPIIDQGPAKRMKF 256


>ref|XP_008774994.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Phoenix dactylifera]
          Length = 260

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/42 (66%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = -3

Query: 539 GYAPPAS-EGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 417
           GYAPP+S E E  PEDQQ    Q+P +DPIIDQGP+KR+KFQ
Sbjct: 219 GYAPPSSSEAEKGPEDQQTADPQVPPMDPIIDQGPAKRIKFQ 260


>gb|PPD74763.1| hypothetical protein GOBAR_DD28315 [Gossypium barbadense]
          Length = 256

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = -3

Query: 539 GYAPPASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 420
           G+ PP +E E  PE+QQ  + Q P+VDPIIDQGP+KRMKF
Sbjct: 217 GFVPPTTEAEKEPENQQTAEPQPPAVDPIIDQGPAKRMKF 256


>ref|XP_009401441.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Musa acuminata subsp. malaccensis]
          Length = 260

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = -3

Query: 539 GYAPPASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKFQ 417
           GYAP AS+ E  P+ QQ ++ Q PSVDPIIDQGP+KRMKFQ
Sbjct: 221 GYAPSASDAEKGPDSQQASEQQ-PSVDPIIDQGPAKRMKFQ 260


>gb|POE85923.1| isoform 2 of mediator of rna polymerase ii transcription subunit 6
           [Quercus suber]
          Length = 224

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 29/41 (70%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
 Frame = -3

Query: 539 GYAPPAS-EGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 420
           GY PPAS + E APE QQ+ +VQ P VDPIIDQGP+KRMKF
Sbjct: 184 GYVPPASADTEKAPEVQQSGEVQPPPVDPIIDQGPAKRMKF 224


>gb|PPR93780.1| hypothetical protein GOBAR_AA26897 [Gossypium barbadense]
          Length = 256

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = -3

Query: 539 GYAPPASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 420
           G+ PP +E +  PE+QQ  + Q P+VDPIIDQGP+KRMKF
Sbjct: 217 GFVPPTTEADKEPENQQTAEPQPPAVDPIIDQGPAKRMKF 256


>ref|XP_017647247.1| PREDICTED: mediator of RNA polymerase II transcription subunit 6
           [Gossypium arboreum]
 gb|KHF98794.1| Putative mediator of RNA polymerase II transcription subunit 6
           [Gossypium arboreum]
          Length = 256

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = -3

Query: 539 GYAPPASEGEMAPEDQQNTQVQLPSVDPIIDQGPSKRMKF 420
           G+ PP +E +  PE+QQ  + Q P+VDPIIDQGP+KRMKF
Sbjct: 217 GFVPPTTEADKEPENQQTAEPQPPAVDPIIDQGPAKRMKF 256