BLASTX nr result
ID: Ophiopogon22_contig00017548
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00017548
(1373 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020257000.1| DNA-directed RNA polymerase I subunit rpa49 ... 597 0.0
gb|ONK75163.1| uncharacterized protein A4U43_C03F14010 [Asparagu... 535 0.0
ref|XP_008783442.1| PREDICTED: DNA-directed RNA polymerase I sub... 382 e-126
ref|XP_010937236.1| PREDICTED: DNA-directed RNA polymerase I sub... 380 e-125
gb|OAY81587.1| DNA-directed RNA polymerase I subunit rpa49 [Anan... 378 e-124
ref|XP_020100940.1| DNA-directed RNA polymerase I subunit rpa49 ... 377 e-124
ref|XP_009386771.1| PREDICTED: uncharacterized protein LOC103973... 372 e-122
ref|XP_020587407.1| DNA-directed RNA polymerase I subunit rpa49 ... 353 e-115
ref|XP_020673334.1| DNA-directed RNA polymerase I subunit rpa49 ... 342 e-110
ref|XP_020673333.1| DNA-directed RNA polymerase I subunit rpa49 ... 333 e-106
ref|XP_010273794.1| PREDICTED: DNA-directed RNA polymerase I sub... 313 1e-99
gb|OVA10366.1| RNA polymerase I associated factor [Macleaya cord... 313 3e-99
ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub... 311 2e-98
emb|CBI35920.3| unnamed protein product, partial [Vitis vinifera] 309 4e-98
ref|XP_022736064.1| DNA-directed RNA polymerase I subunit RPA49 ... 299 1e-93
ref|XP_010062676.1| PREDICTED: DNA-directed RNA polymerase I sub... 296 5e-93
dbj|GAV84934.1| RNA_pol_I_A49 domain-containing protein [Cephalo... 295 2e-92
ref|XP_007039490.2| PREDICTED: DNA-directed RNA polymerase I sub... 296 3e-92
ref|XP_021276274.1| DNA-directed RNA polymerase I subunit rpa49 ... 295 3e-92
gb|EOY23991.1| DNA-directed RNA polymerase I subunit rpa49, puta... 296 4e-92
>ref|XP_020257000.1| DNA-directed RNA polymerase I subunit rpa49 [Asparagus officinalis]
Length = 434
Score = 597 bits (1538), Expect = 0.0
Identities = 300/406 (73%), Positives = 343/406 (84%), Gaps = 7/406 (1%)
Frame = +2
Query: 44 VEMSALTDTPDRIAPVVGYFSSGYNPCDSEQPPEVRVFRHKQHRSSRLDLVVRPQGSNVE 223
VE S L D PDRIAPVVGYFSSGYNPCDS++PPEVRV R++ HRSSRLDLVV+P+ S+VE
Sbjct: 28 VETSYLADNPDRIAPVVGYFSSGYNPCDSQEPPEVRVLRNRNHRSSRLDLVVKPKESSVE 87
Query: 224 FVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKIFRLEPRVMKSPSAKEPPEGL 403
FVG+SYEGEAAVHQPCHYALG+LDKD+QTLKVVPIAANKIFRLEPRVMKSPS +E E L
Sbjct: 88 FVGRSYEGEAAVHQPCHYALGILDKDSQTLKVVPIAANKIFRLEPRVMKSPSVEEASEVL 147
Query: 404 E----EGN--RRISDLTSLYGTKRQRKMDKKMRLLVEQTNNPSAREQLQDEMLKTDTNNE 565
E +GN R+ISDLTSLYGTK+QR MDKK+RLL +QTN+PSARE L DEML D N+E
Sbjct: 148 EGRVDDGNTRRKISDLTSLYGTKKQRNMDKKLRLLAQQTNDPSARENLPDEMLNVDMNDE 207
Query: 566 ALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGERDYLFDILGLFDSGIGENSTFWE 745
AL+DTKAT GPNIPPHDLSAVTPE AYLLDEII KGERDYLFDIL L +SGIGE +WE
Sbjct: 208 ALKDTKATIGPNIPPHDLSAVTPEKAYLLDEIIQKGERDYLFDILDLLNSGIGEKPKYWE 267
Query: 746 ENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHLVNFWKLAASSRR-KSQTALYGDA 922
ENYYP FVVNRI AFILSYITHLVNFWKLAAS+RR KSQ+++ GDA
Sbjct: 268 ENYYPSFVVNRIPKLKEVQNEEEKKKLAFILSYITHLVNFWKLAASNRRSKSQSSISGDA 327
Query: 923 INKYKIPRVIYQKFVKLFLDPSSNVLPTDKKELVIGYILVLTLFADRFSTSPSDIAKDLG 1102
INKYKIPR++YQKF +LF+DP+S VL + KKELVIGYILVLTLFAD+FS+SPSDI+KDLG
Sbjct: 328 INKYKIPRIVYQKFEQLFIDPASKVLSSYKKELVIGYILVLTLFADKFSSSPSDISKDLG 387
Query: 1103 MTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTELKMRRKQK 1240
M+ +D+RLYY QLGCKLS ++R G+ WTLPVPLK ++K RRK+K
Sbjct: 388 MSVSDLRLYYTQLGCKLSNKARFGEVFWTLPVPLKSADMKKRRKRK 433
>gb|ONK75163.1| uncharacterized protein A4U43_C03F14010 [Asparagus officinalis]
Length = 403
Score = 535 bits (1379), Expect = 0.0
Identities = 272/360 (75%), Positives = 306/360 (85%), Gaps = 7/360 (1%)
Frame = +2
Query: 44 VEMSALTDTPDRIAPVVGYFSSGYNPCDSEQPPEVRVFRHKQHRSSRLDLVVRPQGSNVE 223
VE S L D PDRIAPVVGYFSSGYNPCDS++PPEVRV R++ HRSSRLDLVV+P+ S+VE
Sbjct: 28 VETSYLADNPDRIAPVVGYFSSGYNPCDSQEPPEVRVLRNRNHRSSRLDLVVKPKESSVE 87
Query: 224 FVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKIFRLEPRVMKSPSAKEPPEGL 403
FVG+SYEGEAAVHQPCHYALG+LDKD+QTLKVVPIAANKIFRLEPRVMKSPS +E E L
Sbjct: 88 FVGRSYEGEAAVHQPCHYALGILDKDSQTLKVVPIAANKIFRLEPRVMKSPSVEEASEVL 147
Query: 404 E----EGN--RRISDLTSLYGTKRQRKMDKKMRLLVEQTNNPSAREQLQDEMLKTDTNNE 565
E +GN R+ISDLTSLYGTK+QR MDKK+RLL +QTN+PSARE L DEML D N+E
Sbjct: 148 EGRVDDGNTRRKISDLTSLYGTKKQRNMDKKLRLLAQQTNDPSARENLPDEMLNVDMNDE 207
Query: 566 ALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGERDYLFDILGLFDSGIGENSTFWE 745
AL+DTKAT GPNIPPHDLSAVTPE AYLLDEII KGERDYLFDIL L +SGIGE +WE
Sbjct: 208 ALKDTKATIGPNIPPHDLSAVTPEKAYLLDEIIQKGERDYLFDILDLLNSGIGEKPKYWE 267
Query: 746 ENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHLVNFWKLAASSRR-KSQTALYGDA 922
ENYYP FVVNRI AFILSYITHLVNFWKLAAS+RR KSQ+++ GDA
Sbjct: 268 ENYYPSFVVNRIPKLKEVQNEEEKKKLAFILSYITHLVNFWKLAASNRRSKSQSSISGDA 327
Query: 923 INKYKIPRVIYQKFVKLFLDPSSNVLPTDKKELVIGYILVLTLFADRFSTSPSDIAKDLG 1102
INKYKIPR++YQKF +LF+DP+S VL + KKELVIGYILVLTLFAD+FS+SPSDI+KDLG
Sbjct: 328 INKYKIPRIVYQKFEQLFIDPASKVLSSYKKELVIGYILVLTLFADKFSSSPSDISKDLG 387
>ref|XP_008783442.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Phoenix
dactylifera]
Length = 430
Score = 382 bits (980), Expect = e-126
Identities = 222/433 (51%), Positives = 281/433 (64%), Gaps = 20/433 (4%)
Frame = +2
Query: 2 QSRTEXXXXXXXXXVEMSALTDTPDRIAPVVGYFSSGYNPCDSE----QPPEVRVFRHKQ 169
+ RT VEM L++T DRIAP+VGYF SGY+P ++ P VRVFR+++
Sbjct: 9 EGRTASTKKRKRVEVEMEVLSETTDRIAPIVGYFPSGYDPHNAAFAAAGSPSVRVFRNQR 68
Query: 170 HRSSRLDLVVRPQGSNVEFVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKIFR 349
H SSRL+LVV P+ SNVEFVG SY GEAA Q C Y LGVLDK+TQTLK++PIAANKIFR
Sbjct: 69 H-SSRLELVVSPRESNVEFVGTSYSGEAAGPQLCTYTLGVLDKETQTLKILPIAANKIFR 127
Query: 350 LEPRVMKSPSAK-EPPEGL-EEG------NRRISDLTSLYGTKRQRKMDKKMRLLVEQTN 505
LEPR+ K+ SA EP EGL EEG R+I+DLT+LYGTK+ R D + RLL +Q N
Sbjct: 128 LEPRLTKNLSADTEPSEGLAEEGLAEGKVERKIADLTNLYGTKKDRDKDNRWRLLNQQRN 187
Query: 506 NPSAREQLQDEML-----KTDTNNEALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILK 670
+PS +EQL +E L D +NEA ED K PNIPPHD SA TPE AYLLDEI+ +
Sbjct: 188 DPSTQEQLANENLGGGGDDDDVDNEAPEDVKEAAVPNIPPHDRSANTPEKAYLLDEIMPR 247
Query: 671 GERDYLFDILGLFDSGIGENSTFWEE---NYYPCFVVNRIHXXXXXXXXXXXXXQAFILS 841
ER YL DIL EN + E+ YP FV NRIH A ILS
Sbjct: 248 AERAYLLDIL--------ENLQYGEDLASKSYPAFVYNRIHKLREVQDDKEKEKLACILS 299
Query: 842 YITHLVNFWKLAASSRRKSQTALYGDAINKYKIPRVIYQKFVKLFLDPSSNVLPTDKKEL 1021
YITHL FW S+ K++ G KIPR+IYQK +++F++P S+++ +KKEL
Sbjct: 300 YITHLHAFWGRIRFSKHKAR--FVGMTAGGPKIPRIIYQKLLRMFVNPDSDLVSMEKKEL 357
Query: 1022 VIGYILVLTLFADRFSTSPSDIAKDLGMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVP 1201
+IGYILVLTLF D+F + PSDIA+DL MT ++ YYLQLGCKL +++ + TLPVP
Sbjct: 358 LIGYILVLTLFVDKFHSDPSDIARDLKMTVHSLKPYYLQLGCKLFQDAAFQQAFMTLPVP 417
Query: 1202 LKFTELKMRRKQK 1240
L+F E + R+++
Sbjct: 418 LQFPESRRNRRRR 430
>ref|XP_010937236.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Elaeis
guineensis]
Length = 425
Score = 380 bits (975), Expect = e-125
Identities = 222/431 (51%), Positives = 277/431 (64%), Gaps = 18/431 (4%)
Frame = +2
Query: 2 QSRTEXXXXXXXXXVEMSALTDTPDRIAPVVGYFSSGYNPCDSEQP----PEVRVFRHKQ 169
+ RTE VEM L++T DRIAP+VGYF SGY+P ++ P VRVFR++
Sbjct: 6 EGRTESKKKRKRVEVEMEVLSETTDRIAPIVGYFPSGYDPHNAASAAAGGPSVRVFRNQM 65
Query: 170 HRSSRLDLVVRPQGSNVEFVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKIFR 349
+ SSRL+LVV P+ SNVEFVG SY GEAA Q C Y LGVLDK+T TLK+VPIAANKIFR
Sbjct: 66 Y-SSRLELVVSPRDSNVEFVGTSYSGEAAGPQLCTYTLGVLDKETHTLKIVPIAANKIFR 124
Query: 350 LEPRVMKSPSAK-EPPEGL-EEG------NRRISDLTSLYGTKRQRKMDKKMRLLVEQTN 505
LEPR+ K+ S EP EGL EEG R+I+DLT+LYGTK+ R D + R L +Q N
Sbjct: 125 LEPRLTKNLSTDTEPSEGLAEEGLAEGKVERKIADLTNLYGTKKDRDKDNRWRSLNQQRN 184
Query: 506 NPSAREQLQDEML---KTDTNNEALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGE 676
+PSAREQL E D +NE+ ED K PNIPPHD SA T E AYLLDEII K E
Sbjct: 185 DPSAREQLASENPGGDDDDIDNESHEDVKEAAVPNIPPHDRSANTSEKAYLLDEIIPKAE 244
Query: 677 RDYLFDILGLFDSGIGENSTFWEE---NYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYI 847
R YL DIL EN + E+ YP FV NRIH A ILSYI
Sbjct: 245 RPYLLDIL--------ENLQYGEDLASKSYPTFVYNRIHKLREIQDDKEKEKLACILSYI 296
Query: 848 THLVNFWKLAASSRRKSQTALYGDAINKYKIPRVIYQKFVKLFLDPSSNVLPTDKKELVI 1027
THL FW+ S+ K++ G + KIPR+IYQK V++F++P S+++ +KKEL+I
Sbjct: 297 THLHTFWERIRFSKHKAK--FLGMTADAPKIPRIIYQKVVRMFVNPESDIVSMEKKELLI 354
Query: 1028 GYILVLTLFADRFSTSPSDIAKDLGMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLK 1207
GYILVLTLFAD+F + PSDIA+DL MT ++ Y+LQLGCK+ E + TLPVPL+
Sbjct: 355 GYILVLTLFADKFRSDPSDIARDLKMTVHSLKPYFLQLGCKIFHEGAFQQSFMTLPVPLQ 414
Query: 1208 FTELKMRRKQK 1240
F E + R+++
Sbjct: 415 FPEHRRNRRRR 425
>gb|OAY81587.1| DNA-directed RNA polymerase I subunit rpa49 [Ananas comosus]
Length = 430
Score = 378 bits (971), Expect = e-124
Identities = 215/414 (51%), Positives = 271/414 (65%), Gaps = 16/414 (3%)
Frame = +2
Query: 44 VEMSALTDTPDRIAPVVGYFSSGYNPCD--------SEQPPEVRVFRHKQHRSSRLDLVV 199
V M AL ++ DRIAPVVGYF SGY+P + P VRVFR+K+ R++RL+LVV
Sbjct: 25 VSMEALAESGDRIAPVVGYFPSGYDPLGGGAADPAAAADDPSVRVFRNKR-RANRLELVV 83
Query: 200 RPQGSNVEFVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKIFRLEPRVMKS-P 376
P+GS VEFVG+SY GEAA Q C YALGVLDK TQTLK+VPIAANKIFRLEPR+ S P
Sbjct: 84 SPRGSAVEFVGRSYAGEAAAPQLCTYALGVLDKATQTLKIVPIAANKIFRLEPRLAVSQP 143
Query: 377 SAKEPPEGLEEGN-------RRISDLTSLYGTKRQRKMDKKMRLLVEQTNNPSAREQLQD 535
+ E EGL E + R+I DLTS+YGTK+ R DKK L +Q N+PSA E L++
Sbjct: 144 AHMEASEGLTEESMATGQVGRKIQDLTSMYGTKKDRDKDKKWMSLNQQRNDPSAYEHLEN 203
Query: 536 EMLKTDTNNEALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGERDYLFDILGLFDS 715
E D +N A + +T NIPPH+ SA TPE AYL+DEII KGER YL DIL S
Sbjct: 204 EKTDADVDNNAADQETESTPRNIPPHNPSADTPERAYLIDEIIPKGERAYLLDILEALHS 263
Query: 716 GIGENSTFWEENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHLVNFWKLAASSRRK 895
G+ + YP FV NR++ A +LSYITHL +FW+ +SS RK
Sbjct: 264 GVD-----LDLKPYPSFVSNRLYKLRELQDEEEKEKLACMLSYITHLQSFWERLSSSGRK 318
Query: 896 SQTALYGDAINKYKIPRVIYQKFVKLFLDPSSNVLPTDKKELVIGYILVLTLFADRFSTS 1075
S+ + + KIPR+ YQ+ ++F+DP S++L T K EL+IGYILVLTLF D F T
Sbjct: 319 SKH--HSKPADHSKIPRITYQRLQRMFVDPESHLLSTQKNELLIGYILVLTLFVDNFKTD 376
Query: 1076 PSDIAKDLGMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTELKMRRKQ 1237
P+D+A+DL MT +R YY QLGCK+SRE+ + L TLP PLKF EL+ RR++
Sbjct: 377 PTDVARDLKMTIQTLRPYYQQLGCKISRENFSEQSLVTLPAPLKFPELRRRRRR 430
>ref|XP_020100940.1| DNA-directed RNA polymerase I subunit rpa49 [Ananas comosus]
Length = 430
Score = 377 bits (969), Expect = e-124
Identities = 216/414 (52%), Positives = 271/414 (65%), Gaps = 16/414 (3%)
Frame = +2
Query: 44 VEMSALTDTPDRIAPVVGYFSSGYNPCD--------SEQPPEVRVFRHKQHRSSRLDLVV 199
V M AL ++ DRIAPVVGYF SGY+P + P VRVFR+K+ R++RL+LVV
Sbjct: 25 VSMEALAESGDRIAPVVGYFPSGYDPLGGGAAAPAAAADDPSVRVFRNKR-RANRLELVV 83
Query: 200 RPQGSNVEFVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKIFRLEPRVMKS-P 376
P+GS VEFVG+SY GEAA Q C YALGVLDK TQTLK+VPIAANKIFRLEPR+ S P
Sbjct: 84 SPRGSAVEFVGRSYAGEAAAPQLCTYALGVLDKATQTLKIVPIAANKIFRLEPRLAVSQP 143
Query: 377 SAKEPPEGLEEGN-------RRISDLTSLYGTKRQRKMDKKMRLLVEQTNNPSAREQLQD 535
+ E EGL E + R+I DLTSLYGTK+ R DKK L +Q N+PSA E L++
Sbjct: 144 AHMEASEGLTEESMATGQVGRKIQDLTSLYGTKKDRDKDKKWMSLNQQRNDPSAYEHLEN 203
Query: 536 EMLKTDTNNEALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGERDYLFDILGLFDS 715
E D +N A + +T NIPPH+ SA TPE AYL+DEII KGER YL DIL S
Sbjct: 204 EKTDADVDNNAADQETESTPRNIPPHNPSADTPERAYLIDEIIPKGERAYLLDILEALHS 263
Query: 716 GIGENSTFWEENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHLVNFWKLAASSRRK 895
G+ + YP FV NR++ A +LSYITHL +FW+ +SS K
Sbjct: 264 GVD-----LDLKPYPSFVSNRLYKLRELQDEEEKEKLACMLSYITHLQSFWERLSSSGCK 318
Query: 896 SQTALYGDAINKYKIPRVIYQKFVKLFLDPSSNVLPTDKKELVIGYILVLTLFADRFSTS 1075
S+ + + KIPR+ YQ+ ++F+DP S++L T K EL+IGYILVLTLF D F T
Sbjct: 319 SKH--HSKPADHSKIPRITYQRLQRMFVDPESHLLSTQKNELLIGYILVLTLFVDNFKTD 376
Query: 1076 PSDIAKDLGMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTELKMRRKQ 1237
P+D+A+DL MT +R YY QLGCK+SRE+ + L TLPVPLKF EL+ RR++
Sbjct: 377 PTDVARDLKMTIQTLRPYYQQLGCKISRENFSEQSLVTLPVPLKFPELRRRRRR 430
>ref|XP_009386771.1| PREDICTED: uncharacterized protein LOC103973833 [Musa acuminata
subsp. malaccensis]
Length = 424
Score = 372 bits (954), Expect = e-122
Identities = 211/408 (51%), Positives = 268/408 (65%), Gaps = 8/408 (1%)
Frame = +2
Query: 44 VEMSALTDTPDRIAPVVGYFSSGYNPCDSEQPPEVRVFRHKQHRSSRLDLVVRPQGSNVE 223
VEM AL++ DR+APVVGYF SGY+P P ++VFR+K+ R +RL+LVV P G+ V+
Sbjct: 24 VEMEALSEAADRVAPVVGYFPSGYDPRGEGADPSIKVFRNKK-RPNRLELVVSPSGTGVD 82
Query: 224 FVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKIFRLEPRVMKSPSAK-EPPEG 400
FVGKSY GEAA Q C YALGVLDK++QTL++VPIA+NKI RLEPR+ +P A E +G
Sbjct: 83 FVGKSYAGEAAGAQICSYALGVLDKESQTLRIVPIASNKILRLEPRLKMNPFADTEVSDG 142
Query: 401 LEEGN-------RRISDLTSLYGTKRQRKMDKKMRLLVEQTNNPSAREQLQDEMLKTDTN 559
L E + R++ DLTSLYGTK+ R D K R L++Q N+ SARE L++ L D
Sbjct: 143 LAEESIATSKTERKMVDLTSLYGTKKDRDKDNKWRSLIQQRNDSSAREHLENINLNADGE 202
Query: 560 NEALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGERDYLFDILGLFDSGIGENSTF 739
++ LEDT TT NIPP+D SA TPE AYLLDEII KGER +L DIL SG T
Sbjct: 203 SQVLEDTLETTTRNIPPYDASADTPEKAYLLDEIIPKGERVHLLDILDDLHSG-----TD 257
Query: 740 WEENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHLVNFWKLAASSRRKSQTALYGD 919
YP FV NR+H A I SYI+HL NFW+ + SR ++A +
Sbjct: 258 IPSKSYPSFVFNRMHKLREIQDEKEREKLACIFSYISHLQNFWERSRPSRH-FKSASHDK 316
Query: 920 AINKYKIPRVIYQKFVKLFLDPSSNVLPTDKKELVIGYILVLTLFADRFSTSPSDIAKDL 1099
+ + KIPR++YQK +++FLD SNVL T+K EL+IG+ILVLTLFAD F T PSDIA+DL
Sbjct: 317 STDHLKIPRIVYQKLLRMFLDRESNVLSTEKNELLIGHILVLTLFADCFQTDPSDIARDL 376
Query: 1100 GMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTELKMRRKQKR 1243
MT ++ YY QLGCK+ RES L PL+F E+ RR Q+R
Sbjct: 377 KMTVQTLKPYYQQLGCKIFRESPSAPMFMILNAPLQFPEI--RRTQRR 422
>ref|XP_020587407.1| DNA-directed RNA polymerase I subunit rpa49 [Phalaenopsis equestris]
Length = 424
Score = 353 bits (907), Expect = e-115
Identities = 199/399 (49%), Positives = 262/399 (65%), Gaps = 6/399 (1%)
Frame = +2
Query: 50 MSALTDTPDRIAPVVGYFSSGYNPCDSEQPPEVRVFRHKQHRSSRLDLVVRPQGSNVEFV 229
M L++T DR+AP+VGYF SGY+P + P+V V+R+K + +RL+LVVRP NVEFV
Sbjct: 26 MEVLSETGDRMAPIVGYFPSGYDPLAAGADPDVNVYRNKS-KPNRLELVVRPPDCNVEFV 84
Query: 230 GKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKIFRLEPRVMKSPSAK-EPPEGL- 403
GKSY GEAA+ Q C YALGVLDK+TQTLK+VPIAANKI RLEPR++ + E E +
Sbjct: 85 GKSYAGEAAMPQLCTYALGVLDKETQTLKIVPIAANKILRLEPRLVNGDGERTEAGEEVI 144
Query: 404 --EEGNRRISDLTSLYGTKRQRKMDKKMRLLVEQTNNPSAREQLQDEMLKTDTNNEALED 577
E +++LT LYGTK+ + + K + + + ++PS L+ +++ N+EA +D
Sbjct: 145 IDENKEHPMAELTQLYGTKKAKMVASKWKSIKRKVDDPSVLGSLEVGT-ESNLNDEASKD 203
Query: 578 TKATTGPNIPPHDLSAVTPENAYLLDEIILKGERDYLFDILGLFDS--GIGENSTFWEEN 751
+ NIPP+D SAVTP NAY L +IILKGER YL DIL S G NS FWEEN
Sbjct: 204 IEEPLVRNIPPYDASAVTPHNAYPLHKIILKGERSYLKDILETLKSEPNDGYNSKFWEEN 263
Query: 752 YYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHLVNFWKLAASSRRKSQTALYGDAINK 931
+YPCFV++R++ A ILSYITHL+NF K+A S R KS Y A+++
Sbjct: 264 HYPCFVIHRLNKLRDMQDEAEKTQFASILSYITHLINFRKVAESVRWKSYRD-YDKAMSE 322
Query: 932 YKIPRVIYQKFVKLFLDPSSNVLPTDKKELVIGYILVLTLFADRFSTSPSDIAKDLGMTT 1111
+ IP VI+ +F+ +FLDP SNVL + K +L+I YILVLTL AD F T +DI KDL MT
Sbjct: 323 FMIPNVIFHRFLSIFLDPISNVLSSTKSQLLISYILVLTLHADDFRTDSADIEKDLAMTR 382
Query: 1112 TDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTELKMR 1228
++ YYLQLGC++ +E K L TLPVPL F K R
Sbjct: 383 ASLKPYYLQLGCQVYKEGPFKKSLMTLPVPLVFKAQKRR 421
>ref|XP_020673334.1| DNA-directed RNA polymerase I subunit rpa49 isoform X2 [Dendrobium
catenatum]
Length = 431
Score = 342 bits (876), Expect = e-110
Identities = 191/408 (46%), Positives = 264/408 (64%), Gaps = 8/408 (1%)
Frame = +2
Query: 44 VEMSALTDTPDRIAPVVGYFSSGYNPCDSEQPPEVRVFRHKQHRSSRLDLVVRPQGSNVE 223
+EM L++T D++APVVGYF SGY+P + P++++FR+K+ + +RL+LVVRP NVE
Sbjct: 24 LEMEVLSETADKMAPVVGYFPSGYDPVAAGADPDIKLFRNKK-KPNRLELVVRPDDCNVE 82
Query: 224 FVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKIFRLEPRVMKS---PSAKEPP 394
FVGKSY GEAA+ Q C YALGV+DK+TQTLK+ PIAANKI RLEPR + P+
Sbjct: 83 FVGKSYAGEAALPQLCTYALGVVDKETQTLKIFPIAANKILRLEPRFINGFGEPTKVGEE 142
Query: 395 EGLEEGNRR-ISDLTSLYGTKRQRKMDKKMRLLVEQTNNPSAREQLQDEMLKTD--TNNE 565
++E + ++DL LYGTKR + ++ + + + ++ N+PS L+ + TD N+E
Sbjct: 143 VIIDEKKKHPMADLNLLYGTKRSKIIESRRQSINKKLNDPSILGPLE---VGTDGNLNDE 199
Query: 566 ALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGERDYLFDILGLFD--SGIGENSTF 739
A +D K NIPP+D SAVTP++AY L+ II KGER YL DIL + N+ F
Sbjct: 200 ASKDIKEPLDRNIPPYDPSAVTPQSAYPLNNIIPKGERGYLKDILETLELEPDNARNAEF 259
Query: 740 WEENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHLVNFWKLAASSRRKSQTALYGD 919
WE NYYP FV++R+ A ILSYITHL+NF K+A S RR+ Y +
Sbjct: 260 WESNYYPSFVIHRLSKLREIQDEEEKTQFACILSYITHLINFRKVAESVRRRKDKPDYAE 319
Query: 920 AINKYKIPRVIYQKFVKLFLDPSSNVLPTDKKELVIGYILVLTLFADRFSTSPSDIAKDL 1099
A++K+ IP V++Q+F+ LFLDP SN++ ++K L+I Y+LVLTL AD F T +DI KDL
Sbjct: 320 AMSKFMIPSVVFQRFLTLFLDPVSNLISSEKSVLLICYVLVLTLHADDFLTDSTDIEKDL 379
Query: 1100 GMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTELKMRRKQKR 1243
+ ++ Y+LQLGCK K TLPVPL F LK RR ++R
Sbjct: 380 AIARDSLKPYFLQLGCKTDNPKPFQKSRMTLPVPLVFQGLKKRRFRRR 427
>ref|XP_020673333.1| DNA-directed RNA polymerase I subunit rpa49 isoform X1 [Dendrobium
catenatum]
gb|PKU60668.1| hypothetical protein MA16_Dca020441 [Dendrobium catenatum]
Length = 443
Score = 333 bits (853), Expect = e-106
Identities = 191/420 (45%), Positives = 264/420 (62%), Gaps = 20/420 (4%)
Frame = +2
Query: 44 VEMSALTDTPDRIAPVVGYFSSGYNPCDSEQPPEVRVFRHKQHRSSRLDLVVRPQGSNVE 223
+EM L++T D++APVVGYF SGY+P + P++++FR+K+ + +RL+LVVRP NVE
Sbjct: 24 LEMEVLSETADKMAPVVGYFPSGYDPVAAGADPDIKLFRNKK-KPNRLELVVRPDDCNVE 82
Query: 224 FVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANK------------IFRLEPRVM 367
FVGKSY GEAA+ Q C YALGV+DK+TQTLK+ PIAANK I RLEPR +
Sbjct: 83 FVGKSYAGEAALPQLCTYALGVVDKETQTLKIFPIAANKHHDKLVICESIQILRLEPRFI 142
Query: 368 KS---PSAKEPPEGLEEGNRR-ISDLTSLYGTKRQRKMDKKMRLLVEQTNNPSAREQLQD 535
P+ ++E + ++DL LYGTKR + ++ + + + ++ N+PS L+
Sbjct: 143 NGFGEPTKVGEEVIIDEKKKHPMADLNLLYGTKRSKIIESRRQSINKKLNDPSILGPLE- 201
Query: 536 EMLKTD--TNNEALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGERDYLFDILGLF 709
+ TD N+EA +D K NIPP+D SAVTP++AY L+ II KGER YL DIL
Sbjct: 202 --VGTDGNLNDEASKDIKEPLDRNIPPYDPSAVTPQSAYPLNNIIPKGERGYLKDILETL 259
Query: 710 D--SGIGENSTFWEENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHLVNFWKLAAS 883
+ N+ FWE NYYP FV++R+ A ILSYITHL+NF K+A S
Sbjct: 260 ELEPDNARNAEFWESNYYPSFVIHRLSKLREIQDEEEKTQFACILSYITHLINFRKVAES 319
Query: 884 SRRKSQTALYGDAINKYKIPRVIYQKFVKLFLDPSSNVLPTDKKELVIGYILVLTLFADR 1063
RR+ Y +A++K+ IP V++Q+F+ LFLDP SN++ ++K L+I Y+LVLTL AD
Sbjct: 320 VRRRKDKPDYAEAMSKFMIPSVVFQRFLTLFLDPVSNLISSEKSVLLICYVLVLTLHADD 379
Query: 1064 FSTSPSDIAKDLGMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTELKMRRKQKR 1243
F T +DI KDL + ++ Y+LQLGCK K TLPVPL F LK RR ++R
Sbjct: 380 FLTDSTDIEKDLAIARDSLKPYFLQLGCKTDNPKPFQKSRMTLPVPLVFQGLKKRRFRRR 439
>ref|XP_010273794.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Nelumbo
nucifera]
Length = 406
Score = 313 bits (802), Expect = 1e-99
Identities = 189/410 (46%), Positives = 251/410 (61%), Gaps = 11/410 (2%)
Frame = +2
Query: 44 VEMSALTDTPDRIAPVVGYFSSGYNPCDSEQPP--EVRVFRHKQHRSSRLDLVVRPQGSN 217
V+M PD+I P+VGYF SG+NP SE+ +VRV+ +K +R +RL LVV P S
Sbjct: 15 VKMEIFHQHPDKIPPLVGYFPSGFNPKRSEEEDSTKVRVYSNK-NRPNRLQLVVSPNSSK 73
Query: 218 VEFVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKIFRLEPRVMKSPSAKEPPE 397
VEFVG SY EAA Q C YALGVLDK+TQTLK+VPIA+NKIFRLEPRV S + + P
Sbjct: 74 VEFVGTSYSSEAAAAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVRGSEVSDKEPR 133
Query: 398 G--------LEEGNRRISDLTSLYGTKRQRKMDKKMRLLVEQTNNPSAREQLQDEMLKTD 553
G E+ +I DLT+LYGTK+ KKM L +Q +P +++ + ++
Sbjct: 134 GELQEEDLTAEQKADKIRDLTNLYGTKKSISRAKKMESL-KQKEDPISQDAVDKKIEGFV 192
Query: 554 TNNEALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGERDYLFDILGLFDSGIGENS 733
N +ALE T N+PPHD +A TP+ AY L++II KGE DYL D+L L SG +S
Sbjct: 193 INKDALETAAVYTARNVPPHDPTATTPDKAYPLNKIIFKGEWDYLLDVLELLQSGATISS 252
Query: 734 TFWEENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHLVNFWKLAASSRRKSQTALY 913
+ YP FV NRI+ A ILSYITHL+ F K Q ++
Sbjct: 253 -----DAYPSFVCNRIYKLEEIQDEMEKKRLACILSYITHLIKF---------KDQRSVD 298
Query: 914 GDAINKY-KIPRVIYQKFVKLFLDPSSNVLPTDKKELVIGYILVLTLFADRFSTSPSDIA 1090
G + KY K P +I QKF+ LF + + L DK++L+I Y+LVLTLF D+FST SDIA
Sbjct: 299 GASSAKYHKFPPIILQKFLTLFANSETYRLADDKQDLLISYVLVLTLFIDKFSTDMSDIA 358
Query: 1091 KDLGMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTELKMRRKQK 1240
KDL MT +RL+Y LGCKLSR ++ + TLPVPL+F + + +R+++
Sbjct: 359 KDLRMTPVSLRLHYQNLGCKLSRVDKL--LMVTLPVPLQFPKPRTQRRRR 406
>gb|OVA10366.1| RNA polymerase I associated factor [Macleaya cordata]
Length = 427
Score = 313 bits (802), Expect = 3e-99
Identities = 189/416 (45%), Positives = 251/416 (60%), Gaps = 17/416 (4%)
Frame = +2
Query: 44 VEMSALTDTPDRIAPVVGYFSSGYNP-----CDSEQPPEVRVFRHKQHRSSRLDLVVRPQ 208
V+M + P++IAP+VGYF SGY+P + ++PP VRVF +KQ RSSRL+LVV P+
Sbjct: 29 VKMEIVPQHPEKIAPLVGYFPSGYDPQKIYTSEDDEPPRVRVFTNKQ-RSSRLELVVSPK 87
Query: 209 GSNVEFVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKIFRLEPR-----VMKS 373
GS V FVG S+ GEA Q C YALGVLDK+TQ+LK+VPIA NKIFRLEPR V K+
Sbjct: 88 GSKVNFVGTSHSGEATASQACTYALGVLDKETQSLKIVPIACNKIFRLEPRVGGLDVCKN 147
Query: 374 PSAKEPPE----GLEEGNRRISDLTSLYGTKRQRKMDKKMRLLVEQTNNPSAREQLQDEM 541
+KE E +EE +I DLT+LYGTK+ KK +L + +PS ++ LQ +
Sbjct: 148 EPSKESKEEELLTVEEKAGKIRDLTNLYGTKKVITKAKKNDIL-HRKEDPSTQKDLQKKT 206
Query: 542 LKTDTNNEALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGERDYLFDILGLFDSGI 721
K N EALE T NIPPHD +A TPE AY LD+II +GE D L D+L S
Sbjct: 207 EKLVINKEALESAGTYTARNIPPHDSTATTPEKAYPLDKIIFQGEWDSLLDVLDYVQS-- 264
Query: 722 GENSTFWEENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHLVNFWKLAASSRRKSQ 901
N YP FV NR H A I SYITHL+ F + +
Sbjct: 265 ---EEQLASNAYPSFVCNRAHKLMEIEDEVEKKTLACIYSYITHLIKF--------KDKK 313
Query: 902 TALYGDAINKYKIPRVIYQKFVKLFLD--PSSNVLPT-DKKELVIGYILVLTLFADRFST 1072
+ Y + ++IP ++Y+KF+++F D + P+ +KK+L+I Y+LVLTL AD F T
Sbjct: 314 SLDYSASAKSHRIPDILYKKFLRMFHDQFDHGRIEPSLEKKDLLISYVLVLTLIADGFKT 373
Query: 1073 SPSDIAKDLGMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTELKMRRKQK 1240
PSDIAKDL MT+ +R YYL LGCKL+R ++ + TLP+PL F + K R+++
Sbjct: 374 DPSDIAKDLRMTSMSLRQYYLNLGCKLARVDKLLQ--VTLPLPLVFPKAKFERRKR 427
>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Vitis
vinifera]
Length = 421
Score = 311 bits (796), Expect = 2e-98
Identities = 181/411 (44%), Positives = 253/411 (61%), Gaps = 13/411 (3%)
Frame = +2
Query: 44 VEMSALTDTPDRIAPVVGYFSSGYNPC-----DSEQPPEVRVFRHKQHRSSRLDLVVRPQ 208
V+M + + P++I P+VGYF SG++P +S+ PP V+VFR+K R++RL LVV P
Sbjct: 29 VKMEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKA-RANRLQLVVSPN 87
Query: 209 GSNVEFVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKIFRLEPRVMKSPSAKE 388
S V FVG SY GEAA Q C YALGVLDK+TQTLK+VPIA+NKIFRLEPRV S ++ +
Sbjct: 88 DSKVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDASVD 147
Query: 389 PPEGLEEGNR-------RISDLTSLYGTKRQRKMDKKMRLLVEQTNNPSAREQLQDEMLK 547
P L +G + R+ DLT+LYGTK+ KK++ L Q ++P +++ L ++ +
Sbjct: 148 EPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQAL-NQKDDPRSQKDLDRKLKE 206
Query: 548 TDTNNEALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGERDYLFDILGLFDSGIGE 727
N EALE T A + NIPP+D +A TP+ AY LD+II KGE DYL DIL L +G+
Sbjct: 207 VVINKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVEV 266
Query: 728 NSTFWEENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHLVNFWKLAASSRRKSQTA 907
E + Y FV NRI A I SYI HL+ + K + +
Sbjct: 267 -----ESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKY---------KDRNS 312
Query: 908 LYGDAINKYKIPRVIYQKFVKLF-LDPSSNVLPTDKKELVIGYILVLTLFADRFSTSPSD 1084
+ + +KIP ++ QKF +F LD S L +KK+L+I Y+LVLTL+AD F T PSD
Sbjct: 313 MDASSAKHHKIPGILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSD 372
Query: 1085 IAKDLGMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTELKMRRKQ 1237
IA+DL M+ +R ++ LGCKL ++++ + TLPVPL F L+ +R++
Sbjct: 373 IARDLRMSAVKLRAHFEHLGCKLVSQNKV--TMATLPVPLTFPRLRQKRRR 421
>emb|CBI35920.3| unnamed protein product, partial [Vitis vinifera]
Length = 391
Score = 309 bits (791), Expect = 4e-98
Identities = 180/409 (44%), Positives = 251/409 (61%), Gaps = 13/409 (3%)
Frame = +2
Query: 50 MSALTDTPDRIAPVVGYFSSGYNPC-----DSEQPPEVRVFRHKQHRSSRLDLVVRPQGS 214
M + + P++I P+VGYF SG++P +S+ PP V+VFR+K R++RL LVV P S
Sbjct: 1 MEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKA-RANRLQLVVSPNDS 59
Query: 215 NVEFVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKIFRLEPRVMKSPSAKEPP 394
V FVG SY GEAA Q C YALGVLDK+TQTLK+VPIA+NKIFRLEPRV S ++ + P
Sbjct: 60 KVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDASVDEP 119
Query: 395 EGLEEGNR-------RISDLTSLYGTKRQRKMDKKMRLLVEQTNNPSAREQLQDEMLKTD 553
L +G + R+ DLT+LYGTK+ KK++ L Q ++P +++ L ++ +
Sbjct: 120 SSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQAL-NQKDDPRSQKDLDRKLKEVV 178
Query: 554 TNNEALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGERDYLFDILGLFDSGIGENS 733
N EALE T A + NIPP+D +A TP+ AY LD+II KGE DYL DIL L +G+
Sbjct: 179 INKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVEV-- 236
Query: 734 TFWEENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHLVNFWKLAASSRRKSQTALY 913
E + Y FV NRI A I SYI HL+ + K + ++
Sbjct: 237 ---ESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKY---------KDRNSMD 284
Query: 914 GDAINKYKIPRVIYQKFVKLF-LDPSSNVLPTDKKELVIGYILVLTLFADRFSTSPSDIA 1090
+ +KIP ++ QKF +F LD S L +KK+L+I Y+LVLTL+AD F T PSDIA
Sbjct: 285 ASSAKHHKIPGILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIA 344
Query: 1091 KDLGMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTELKMRRKQ 1237
+DL M+ +R ++ LGCKL ++++ + TLPVPL F L+ +R++
Sbjct: 345 RDLRMSAVKLRAHFEHLGCKLVSQNKV--TMATLPVPLTFPRLRQKRRR 391
>ref|XP_022736064.1| DNA-directed RNA polymerase I subunit RPA49 [Durio zibethinus]
Length = 449
Score = 299 bits (766), Expect = 1e-93
Identities = 177/421 (42%), Positives = 242/421 (57%), Gaps = 21/421 (4%)
Frame = +2
Query: 44 VEMSALTDTPDRIAPVVGYFSSGYNPCDSE--------------QPPEVRVFRHK-QHRS 178
V++ D P +I P+V YF SGYNP ++ PP+++VFR+ Q ++
Sbjct: 45 VKIQLFQDQPSKIPPLVAYFPSGYNPSEANPQTRQEEEEGNSQSNPPKIKVFRNMAQRKT 104
Query: 179 SRLDLVVRPQGSNVEFVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKIFRLEP 358
+RL +VV P GSNV+FVG SY GEAA Q C ++LGVLDK+T TLK+VPIA NKIFRLEP
Sbjct: 105 NRLQVVVSPSGSNVDFVGSSYSGEAAAPQVCRFSLGVLDKETGTLKIVPIACNKIFRLEP 164
Query: 359 RVMKSPSAKE------PPEGLEEGNRRISDLTSLYGTKRQRKMDKKMRLLVEQTNNPSAR 520
RV S +A + E E ++ +LT+LYGTK+ RK K + +++ +P +
Sbjct: 165 RVRSSEAANDGASNSVKSELTSEKKDKMGELTALYGTKKDRKKRKDF-IDLKKEADPELQ 223
Query: 521 EQLQDEMLKTDTNNEALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGERDYLFDIL 700
+ L ++ + + EALE+T A NIPP+D SA TP AY LD+II KGE D+L DI
Sbjct: 224 KSLDKKIEQVAFDKEALENTSALITHNIPPYDSSATTPLEAYPLDKIIFKGEWDFLGDIY 283
Query: 701 GLFDSGIGENSTFWEENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHLVNFWKLAA 880
L G S N YP FV NRIH + I SYITHLV F L +
Sbjct: 284 KLLQVGAEVAS-----NAYPHFVCNRIHKLDAIRDETVKGKLSCIFSYITHLVKFKDLFS 338
Query: 881 SSRRKSQTALYGDAINKYKIPRVIYQKFVKLFLDPSSNVLPTDKKELVIGYILVLTLFAD 1060
S + P +I +F+ +F DP S +L +DK +L+I Y+LVLTL AD
Sbjct: 339 MGHVTS--------AKNHNFPSIIRHRFMSMFTDPGSKILSSDKIDLLISYVLVLTLHAD 390
Query: 1061 RFSTSPSDIAKDLGMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTELKMRRKQK 1240
F T PSDIAKDL ++ D+R ++L LGCK E + TLPVPLKF ++++++
Sbjct: 391 GFQTDPSDIAKDLRVSKVDLRRHFLNLGCKFMHEKSI--LFATLPVPLKFPSQNLKQRRR 448
Query: 1241 R 1243
R
Sbjct: 449 R 449
>ref|XP_010062676.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Eucalyptus
grandis]
gb|KCW69807.1| hypothetical protein EUGRSUZ_F03167 [Eucalyptus grandis]
Length = 415
Score = 296 bits (759), Expect = 5e-93
Identities = 182/409 (44%), Positives = 244/409 (59%), Gaps = 15/409 (3%)
Frame = +2
Query: 56 ALTDTPDRIAPVVGYFSSGYNPC--------DSEQPPEVRVFRHKQHRSSRLDLVVRPQG 211
AL D+ D+I P+VGYF SG++P D + P VRV+R+ + +RL LVVRP
Sbjct: 25 ALPDSADKIPPLVGYFPSGFDPSSGGGGGGGDPPEEPGVRVYRNGKW-PNRLQLVVRPPE 83
Query: 212 SNVEFVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKIFRLEPRVMKSPSAKEP 391
SNV FVG S GE Q C YALGVLDK++QTLKVVPIA NKIFRLEPRV +EP
Sbjct: 84 SNVTFVGSSSSGEYTGVQSCTYALGVLDKESQTLKVVPIACNKIFRLEPRVASDLPEEEP 143
Query: 392 PE------GLEEGNRRISDLTSLYGTKRQRKMDKKMRLLVEQTNNPSAREQLQDEMLKTD 553
PE +E ++ +L L+GTKR DKKM+ L Q ++P++++ L ++ +
Sbjct: 144 PELGRGEISAKEKADKVRELNLLFGTKRSVTQDKKMQSL-RQEDDPNSQKDLDRKIKEVA 202
Query: 554 TNNEALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGERDYLFDILGLFDSGIGENS 733
N EALE T A NIPP++ SA P++AY L++IILKGE DY+ DI + G +
Sbjct: 203 INKEALESTDAHIARNIPPYNSSATVPKDAYPLEKIILKGEWDYIKDIFQFLEEGQKVS- 261
Query: 734 TFWEENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHLVNFWKLAASSRRKSQTALY 913
+ YP FV NRIH ILSYI HL+ F K Q +
Sbjct: 262 ----PDAYPTFVCNRIHKLGEMQDEMEKETLGCILSYINHLIKF---------KDQHSAD 308
Query: 914 GDAINK-YKIPRVIYQKFVKLFLDPSSNVLPTDKKELVIGYILVLTLFADRFSTSPSDIA 1090
G + +K +KIP ++ QKF +F + S LP++K +L+I Y+LVLTLFAD F T P+DIA
Sbjct: 309 GASSSKNHKIPSILRQKFSTMFSNAESKWLPSEKIDLLISYVLVLTLFADDFRTDPTDIA 368
Query: 1091 KDLGMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTELKMRRKQ 1237
KDL M++ +R ++ LGCK SRE + LPVPLKF EL+ RR++
Sbjct: 369 KDLRMSSVTIRQHFEHLGCKFSREKNV--LYAKLPVPLKFPELRRRRRR 415
>dbj|GAV84934.1| RNA_pol_I_A49 domain-containing protein [Cephalotus follicularis]
Length = 431
Score = 295 bits (756), Expect = 2e-92
Identities = 179/409 (43%), Positives = 245/409 (59%), Gaps = 11/409 (2%)
Frame = +2
Query: 47 EMSALTDTPDRIAPVVGYFSSGYNPCDSE---QPPEVRVFRHK-QHRSSRLDLVVRPQGS 214
+M + + ++ P+VGYF SG++P E +PP+VR+FR+K R RL LVV P GS
Sbjct: 40 KMEYIHEQANKGLPLVGYFPSGFDPQSQETNKEPPKVRIFRNKLSKRDKRLQLVVTPSGS 99
Query: 215 NVEFVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKIFRLEPRVMKSPSAKEPP 394
+++FVG SY GEA Q C YALGVLDKD+ L +VPIAANKIFRLEP+V S A E P
Sbjct: 100 SLDFVGTSYLGEAETRQACKYALGVLDKDSGKLTIVPIAANKIFRLEPKVRNSDLADEEP 159
Query: 395 EGL------EEGNRRISDLTSLYGTKRQRKMDKKMRLLVEQTNNPSAREQLQDEMLKTDT 556
+ E+ R +L +LYGTK+ K KK+ L + ++P ++ L ++
Sbjct: 160 QSKNEELSPEKNASRKRELNNLYGTKKSIKAAKKLYDL-NKEDDPYTQKVLDSQIKNVPG 218
Query: 557 NNEALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGERDYLFDILGLFDSGIGENST 736
N EALE T A NIPP+D SA TP+ AY L++II+ GE ++L DI L +G E ST
Sbjct: 219 NEEALESTIADIARNIPPYDSSATTPQEAYPLNKIIIHGEWNFLEDIYYLLQAG-EEVST 277
Query: 737 FWEENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHLVNFWKLAASSRRKSQTALYG 916
N YP FV NRIH A ILSYITHL+ F K Q ++ G
Sbjct: 278 ----NAYPTFVCNRIHKLQQIQVEAEQRMLASILSYITHLIKF---------KDQHSMEG 324
Query: 917 -DAINKYKIPRVIYQKFVKLFLDPSSNVLPTDKKELVIGYILVLTLFADRFSTSPSDIAK 1093
+ ++IP +++QKF+ F +P S L DK L++GY+LVLTL AD F T+P DIAK
Sbjct: 325 ASSAKSHRIPSILHQKFMSRFGNPDSKRLSVDKINLLMGYVLVLTLHADEFQTTPDDIAK 384
Query: 1094 DLGMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTELKMRRKQK 1240
DL ++ +R ++ LGCKL RE+ + + TLPVPLKF + RR+++
Sbjct: 385 DLRISVVQLRSHFENLGCKLRREN--NRFVATLPVPLKFPDSNSRRRRR 431
>ref|XP_007039490.2| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Theobroma
cacao]
Length = 457
Score = 296 bits (758), Expect = 3e-92
Identities = 176/429 (41%), Positives = 246/429 (57%), Gaps = 29/429 (6%)
Frame = +2
Query: 44 VEMSALTDTPDRIAPVVGYFSSGYNPCDSE---------------------QPPEVRVFR 160
V++ D P++I P+V YF SGYNPC ++ P V+V+R
Sbjct: 45 VKIQLFQDQPNKIPPLVAYFPSGYNPCKTDPQTRQEEEEEEEEEEGPDNKSNQPRVKVYR 104
Query: 161 HK-QHRSSRLDLVVRPQGSNVEFVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAAN 337
+ Q +++RL +VV P GSNV+FVG +Y GEAA Q C Y+LGVLD++T+TLK++PIA+N
Sbjct: 105 NMAQRKTNRLQVVVSPSGSNVDFVGSNYSGEAAAAQVCKYSLGVLDRETRTLKIIPIASN 164
Query: 338 KIFRLEPRVMKSPSAKEPPEG-------LEEGNRRISDLTSLYGTKRQRKMDKKMRLLVE 496
KIFRLEPRV S +A + E+ ++ +LT+LYGTK+ RK K + L +
Sbjct: 165 KIFRLEPRVRSSETANKDVSSSVKSELTTEDKEDKMGELTALYGTKKDRKKRKDLNNLKK 224
Query: 497 QTNNPSAREQLQDEMLKTDTNNEALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGE 676
+ +P +++ L +++ + N EAL +T A NIPPHD SA TP AY LD+IILKG+
Sbjct: 225 EV-DPESQKSLDEKIEQVAFNKEALGNTSALVARNIPPHDCSATTPVEAYPLDKIILKGD 283
Query: 677 RDYLFDILGLFDSGIGENSTFWEENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHL 856
++L DI GL + G S N YP FV NRI+ + + S+ITHL
Sbjct: 284 WEFLGDIYGLLEVGAEVAS-----NAYPTFVCNRINKLEGIQDETEKRKLSCVFSFITHL 338
Query: 857 VNFWKLAASSRRKSQTALYGDAINKYKIPRVIYQKFVKLFLDPSSNVLPTDKKELVIGYI 1036
V F + R S +KIP +I Q+F +F DP D+ L+I Y+
Sbjct: 339 VKFNDQFSMDRVASAKG--------HKIPSIIRQRFFTMFTDPGLRKPSRDQINLLISYV 390
Query: 1037 LVLTLFADRFSTSPSDIAKDLGMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTE 1216
LVLTL AD F T PSDIAKDL M++ +R ++ LGCKL RE+ TLPVPLKF
Sbjct: 391 LVLTLHADGFRTDPSDIAKDLRMSSIGLRPHFENLGCKLVREN--NSIFTTLPVPLKFPS 448
Query: 1217 LKMRRKQKR 1243
++R++KR
Sbjct: 449 ENLKRQRKR 457
>ref|XP_021276274.1| DNA-directed RNA polymerase I subunit rpa49 isoform X1 [Herrania
umbratica]
Length = 424
Score = 295 bits (755), Expect = 3e-92
Identities = 178/427 (41%), Positives = 246/427 (57%), Gaps = 27/427 (6%)
Frame = +2
Query: 44 VEMSALTDTPDRIAPVVGYFSSGYNPC-------------DSEQP------PEVRVFRHK 166
V++ D P++I P+V YF SGYNPC + E+P P V+V+R+
Sbjct: 14 VKIQLFQDQPNKIPPLVAYFPSGYNPCKTDPQTRQEEEEEEEERPNNKSDQPRVKVYRNM 73
Query: 167 -QHRSSRLDLVVRPQGSNVEFVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAANKI 343
Q +++RL +VV P GSNV+FVG +Y GEAA Q C Y+LGVLD++T+TLK++P+A+NKI
Sbjct: 74 AQRKTNRLQVVVSPSGSNVDFVGSNYSGEAAAAQVCRYSLGVLDRETRTLKIIPVASNKI 133
Query: 344 FRLEPRVMKSPSAKEPPEG-------LEEGNRRISDLTSLYGTKRQRKMDKKMRLLVEQT 502
FRLEPRV S +A + E+ ++ +LT+LYGTK+ RK K + L ++
Sbjct: 134 FRLEPRVRSSETANKDVSNSVKSELTTEDKEDKMGELTALYGTKKDRKKRKDLNNLRKEV 193
Query: 503 NNPSAREQLQDEMLKTDTNNEALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGERD 682
+P +++ L ++ + N EAL +T A NIPPHD SA TP AY LD+IILKG+ +
Sbjct: 194 -DPESQKSLDKKIEQVAFNKEALGNTSALIARNIPPHDSSATTPIEAYPLDKIILKGDWE 252
Query: 683 YLFDILGLFDSGIGENSTFWEENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHLVN 862
+L DI GL + G S N YP FV NRI+ + + S+ITHLV
Sbjct: 253 FLGDIYGLLEVGAEVAS-----NAYPTFVCNRINKLEGIQDETEKRKLSCVFSFITHLVK 307
Query: 863 FWKLAASSRRKSQTALYGDAINKYKIPRVIYQKFVKLFLDPSSNVLPTDKKELVIGYILV 1042
F + R S +KIP +I Q+F +F DP D+ L+I YILV
Sbjct: 308 FNDQVSMDRFASAKG--------HKIPSIIRQRFFTMFTDPGLRRPSPDQINLLISYILV 359
Query: 1043 LTLFADRFSTSPSDIAKDLGMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTELK 1222
LTL AD F T PSDIAKDL M++ +R ++ LGCKL R+S TLPVPLKF
Sbjct: 360 LTLHADGFRTDPSDIAKDLRMSSIGLRPHFENLGCKLVRDS--NSIFTTLPVPLKFPSEN 417
Query: 1223 MRRKQKR 1243
+ RK++R
Sbjct: 418 LLRKRRR 424
>gb|EOY23991.1| DNA-directed RNA polymerase I subunit rpa49, putative [Theobroma
cacao]
Length = 457
Score = 296 bits (757), Expect = 4e-92
Identities = 176/429 (41%), Positives = 246/429 (57%), Gaps = 29/429 (6%)
Frame = +2
Query: 44 VEMSALTDTPDRIAPVVGYFSSGYNPCDSE---------------------QPPEVRVFR 160
V++ D P++I P+V YF SGYNPC ++ P V+V+R
Sbjct: 45 VKIQLFQDQPNKIPPLVAYFPSGYNPCKTDPQTRQGEEEEEEEEEGPDNKSNQPRVKVYR 104
Query: 161 HK-QHRSSRLDLVVRPQGSNVEFVGKSYEGEAAVHQPCHYALGVLDKDTQTLKVVPIAAN 337
+ Q +++RL +VV P GSNV+FVG +Y GEAA Q C Y+LGVLD++T+TLK++PIA+N
Sbjct: 105 NMAQRKTNRLQVVVSPSGSNVDFVGSNYSGEAAAAQVCRYSLGVLDRETRTLKIIPIASN 164
Query: 338 KIFRLEPRVMKSPSAKEPPEG-------LEEGNRRISDLTSLYGTKRQRKMDKKMRLLVE 496
KIFRLEPRV S +A + E+ ++ +LT+LYGTK+ RK K + L +
Sbjct: 165 KIFRLEPRVRSSETANKDVSSSVKSELTTEDKEDKMGELTALYGTKKDRKKRKDLNNLKK 224
Query: 497 QTNNPSAREQLQDEMLKTDTNNEALEDTKATTGPNIPPHDLSAVTPENAYLLDEIILKGE 676
+ +P +++ L +++ + N EAL +T A NIPPHD SA TP AY LD+IILKG+
Sbjct: 225 EV-DPESQKSLDEKIEQVAFNKEALGNTSALVARNIPPHDSSATTPVEAYPLDKIILKGD 283
Query: 677 RDYLFDILGLFDSGIGENSTFWEENYYPCFVVNRIHXXXXXXXXXXXXXQAFILSYITHL 856
++L DI GL + G S N YP FV NRI+ + + S+ITHL
Sbjct: 284 WEFLGDIYGLLEVGAEVAS-----NAYPTFVCNRINKLEGIQDETEKRKLSCVFSFITHL 338
Query: 857 VNFWKLAASSRRKSQTALYGDAINKYKIPRVIYQKFVKLFLDPSSNVLPTDKKELVIGYI 1036
V F + R S +KIP +I Q+F +F DP D+ L+I Y+
Sbjct: 339 VKFNDQFSMDRVASAKG--------HKIPSIIRQRFFTMFTDPGLRKPSRDQINLLISYV 390
Query: 1037 LVLTLFADRFSTSPSDIAKDLGMTTTDMRLYYLQLGCKLSRESRMGKRLWTLPVPLKFTE 1216
LVLTL AD F T PSDIAKDL M++ +R ++ LGCKL RE+ TLPVPLKF
Sbjct: 391 LVLTLHADGFRTDPSDIAKDLRMSSIGLRPHFENLGCKLVREN--NSIFTTLPVPLKFPS 448
Query: 1217 LKMRRKQKR 1243
++R++KR
Sbjct: 449 ETLKRQRKR 457