BLASTX nr result
ID: Ophiopogon22_contig00016714
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00016714
(535 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinen... 251 1e-78
gb|ONK68535.1| uncharacterized protein A4U43_C05F12950 [Asparagu... 236 5e-75
gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposo... 241 9e-75
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 252 2e-74
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 246 2e-72
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 246 2e-72
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic... 238 3e-72
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo... 241 4e-71
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo... 239 6e-70
emb|CAA37920.1| unnamed protein product, partial [Arabidopsis th... 228 1e-69
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 238 2e-69
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 236 2e-69
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 238 3e-69
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa] 238 3e-69
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 238 3e-69
gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposo... 228 4e-69
emb|CAJ86192.1| H0306F03.15 [Oryza sativa] 236 5e-69
gb|ASR75372.1| retrotransposon protein [Oryza nivara] 236 7e-69
gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo... 235 9e-69
emb|CAJ86151.1| H0413E07.4 [Oryza sativa] 236 1e-68
>gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 502
Score = 251 bits (642), Expect = 1e-78
Identities = 124/179 (69%), Positives = 147/179 (82%), Gaps = 2/179 (1%)
Frame = +3
Query: 3 AQKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEG 182
+QKEGVDY+EIFSPVVKHTSIRLLL++ Q+D+E+EQMDVKTAFLHG+LEE IYM QPEG
Sbjct: 56 SQKEGVDYDEIFSPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEG 115
Query: 183 YIVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVY--IKQEPEPT 356
++ GKE VC L+KSLYGLKQSPRQWYKRFDT+M + + RC Y+ CVY + ++ E
Sbjct: 116 FVETGKEDLVCRLRKSLYGLKQSPRQWYKRFDTYMLKIGYTRCLYDCCVYYHVFEDGEII 175
Query: 357 YLLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIA +DM IEE+K L EFDMKDLGAA+ ILGIEI RDR AGK+WLSQ
Sbjct: 176 LLLLYVDDMLIACKDMSKIEELKKKLGAEFDMKDLGAAQNILGIEIRRDRKAGKIWLSQ 234
>gb|ONK68535.1| uncharacterized protein A4U43_C05F12950 [Asparagus officinalis]
Length = 299
Score = 236 bits (601), Expect = 5e-75
Identities = 117/179 (65%), Positives = 148/179 (82%), Gaps = 2/179 (1%)
Frame = +3
Query: 3 AQKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEG 182
+Q EGVD+NE+FSPV+KHTSIR+L A+V F+LELEQ+DVKTAFLHGEL+E+I+M QPEG
Sbjct: 36 SQTEGVDFNEVFSPVIKHTSIRVLFAMVAHFNLELEQLDVKTAFLHGELDEQIFMHQPEG 95
Query: 183 YIVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIKQEPEP--T 356
+IV+GKE VC L+KSLYGLKQSPRQWY RFDTFM + + R +Y+SCVY K+ +
Sbjct: 96 FIVEGKEDHVCRLKKSLYGLKQSPRQWYLRFDTFMFEHGYSRNKYDSCVYHKKLNDGFFV 155
Query: 357 YLLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
YLLLYVDD+LIAA+DM I E+K+ L+ EF+MK+LGA +KILG+EI R+R G L+LSQ
Sbjct: 156 YLLLYVDDMLIAAKDMSEINELKSQLKHEFEMKNLGATKKILGMEIHRNRREGSLFLSQ 214
>gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 503
Score = 241 bits (616), Expect = 9e-75
Identities = 119/178 (66%), Positives = 146/178 (82%), Gaps = 2/178 (1%)
Frame = +3
Query: 6 QKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGY 185
QKEG+D+NEIFSPVV+HTSIR+LLA V FDLELEQ+DVKTAFLHGELEE+IYM QPEG+
Sbjct: 57 QKEGIDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGF 116
Query: 186 IVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIKQEPEPT--Y 359
+V KE VC L+KSLYGLKQ+PRQWYK+FD+FM + R +Y+ C+Y +Q P+ T Y
Sbjct: 117 VVPSKEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIY 176
Query: 360 LLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIA+RD I ++K L EF+MK+LGAA+KILG+EI RDR GKL+LSQ
Sbjct: 177 LLLYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQ 234
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 252 bits (644), Expect = 2e-74
Identities = 123/179 (68%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
Frame = +3
Query: 3 AQKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEG 182
+QKEGVDY+EIFSPVVKHTSIRLLL++ Q+D+E+EQMDVKTAFLHG+LEE IYM QPEG
Sbjct: 856 SQKEGVDYDEIFSPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEG 915
Query: 183 YIVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVY--IKQEPEPT 356
++ GKE VC L+KSLYGLKQSPRQWYK FDT+M + + RC+Y+ CVY + ++ +
Sbjct: 916 FVETGKENLVCRLKKSLYGLKQSPRQWYKPFDTYMLKIGYTRCQYDCCVYYHVFEDGKVI 975
Query: 357 YLLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIA RDML I+++K L EFDMKDLGAA+KILGIEI RDR AGK+WLSQ
Sbjct: 976 LLLLYVDDMLIACRDMLQIQKLKKKLGAEFDMKDLGAAQKILGIEIRRDRNAGKIWLSQ 1034
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 246 bits (629), Expect = 2e-72
Identities = 121/178 (67%), Positives = 151/178 (84%), Gaps = 2/178 (1%)
Frame = +3
Query: 6 QKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGY 185
QKEG+DYNE+FSPVVKH+SIR+LLA+V + DLELEQ+DVKTAFLHGELEE IYM+QPEG+
Sbjct: 1376 QKEGIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEETIYMRQPEGF 1435
Query: 186 IVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIKQ--EPEPTY 359
V GKE VCLL+KSLYGLKQSPRQWYKRFD+FM Q + RC+Y++CVY ++ + Y
Sbjct: 1436 TVPGKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIY 1495
Query: 360 LLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIA+++M I ++K+ L EF+MKDLGAA+KILG++I RDR AGKL +SQ
Sbjct: 1496 LLLYVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQ 1553
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 246 bits (629), Expect = 2e-72
Identities = 121/178 (67%), Positives = 151/178 (84%), Gaps = 2/178 (1%)
Frame = +3
Query: 6 QKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGY 185
QKEG+DYNE+FSPVVKH+SIR+LLA+V + DLELEQ+DVKTAFLHGELEE IYM+QPEG+
Sbjct: 1397 QKEGIDYNEVFSPVVKHSSIRVLLAMVAKSDLELEQLDVKTAFLHGELEETIYMRQPEGF 1456
Query: 186 IVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIKQ--EPEPTY 359
V GKE VCLL+KSLYGLKQSPRQWYKRFD+FM Q + RC+Y++CVY ++ + Y
Sbjct: 1457 TVPGKEDHVCLLKKSLYGLKQSPRQWYKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIY 1516
Query: 360 LLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIA+++M I ++K+ L EF+MKDLGAA+KILG++I RDR AGKL +SQ
Sbjct: 1517 LLLYVDDMLIASKNMSEINKLKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQ 1574
>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
Length = 624
Score = 238 bits (607), Expect = 3e-72
Identities = 119/178 (66%), Positives = 146/178 (82%), Gaps = 2/178 (1%)
Frame = +3
Query: 6 QKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGY 185
QKEG+D+NEIFSPVV+HTSIR+LLA V FDLELEQ+DVKTAFLHGELEE+IYM+Q +G+
Sbjct: 240 QKEGIDFNEIFSPVVRHTSIRVLLAFVALFDLELEQLDVKTAFLHGELEEEIYMEQSDGF 299
Query: 186 IVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIK--QEPEPTY 359
I GKE VC L+KSLYGLKQ+PRQWYKRF +FM N+ + +Y+ C+Y + Q Y
Sbjct: 300 IAPGKEHLVCRLKKSLYGLKQAPRQWYKRFHSFMIGQNYCKSQYDDCIYFQNFQNGSFIY 359
Query: 360 LLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIA+RD I+++KT L EFDMK+LGAA+KILG+EI RDR AGKL+LSQ
Sbjct: 360 LLLYVDDMLIASRDKSLIKKLKTELSNEFDMKELGAAKKILGMEIRRDRQAGKLFLSQ 417
>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1032
Score = 241 bits (616), Expect = 4e-71
Identities = 119/178 (66%), Positives = 146/178 (82%), Gaps = 2/178 (1%)
Frame = +3
Query: 6 QKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGY 185
QKEG+D+NEIFSPVV+HTSIR+LLA V FDLELEQ+DVKTAFLHGELEE+IYM QPEG+
Sbjct: 586 QKEGIDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGF 645
Query: 186 IVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIKQEPEPT--Y 359
+V KE VC L+KSLYGLKQ+PRQWYK+FD+FM + R +Y+ C+Y +Q P+ T Y
Sbjct: 646 VVPSKEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIY 705
Query: 360 LLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIA+RD I ++K L EF+MK+LGAA+KILG+EI RDR GKL+LSQ
Sbjct: 706 LLLYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQ 763
>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Capsicum
baccatum]
Length = 1526
Score = 239 bits (611), Expect = 6e-70
Identities = 116/178 (65%), Positives = 147/178 (82%), Gaps = 2/178 (1%)
Frame = +3
Query: 6 QKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGY 185
Q+EG+D+NE+FSPVV+H+SIR+LLA+V +DLELEQ+DVKTAFLHG LEE+IY++QPEG+
Sbjct: 546 QQEGIDFNEVFSPVVRHSSIRVLLALVALYDLELEQLDVKTAFLHGNLEEEIYIQQPEGF 605
Query: 186 IVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIKQ--EPEPTY 359
+V GKE VC L+KSLYGLKQSPRQWYKRFD+FM + R Y++CVY ++ + Y
Sbjct: 606 VVPGKENHVCRLKKSLYGLKQSPRQWYKRFDSFMTGHGYSRSSYDNCVYFQKLSDGSLVY 665
Query: 360 LLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIAARD ++++K L EFDMKDLG A+KILG+EI RDR AGKL+LSQ
Sbjct: 666 LLLYVDDMLIAARDKTLVDKLKVQLNSEFDMKDLGPAKKILGMEINRDRQAGKLFLSQ 723
>emb|CAA37920.1| unnamed protein product, partial [Arabidopsis thaliana]
Length = 494
Score = 228 bits (581), Expect = 1e-69
Identities = 115/178 (64%), Positives = 140/178 (78%), Gaps = 2/178 (1%)
Frame = +3
Query: 6 QKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEGY 185
Q+EGVDY EIF+PV KHTSIR+L++VV DLELEQMDVKTAFLHGELEE++YM+QP+G+
Sbjct: 146 QREGVDYQEIFAPVAKHTSIRILMSVVVDQDLELEQMDVKTAFLHGELEEELYMEQPDGF 205
Query: 186 IVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIKQ--EPEPTY 359
I + E KVCLL+KSLYGLKQSPRQW KRF FM NFIR E+++CVY+KQ E + Y
Sbjct: 206 ISEDGENKVCLLKKSLYGLKQSPRQWNKRFSRFMIDQNFIRSEHDACVYVKQAGEQDHLY 265
Query: 360 LLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIA + I +VK L EF+MKD+G A +ILGI+I RDR G L +SQ
Sbjct: 266 LLLYVDDMLIAGKSKSEINKVKEQLSMEFEMKDMGPASRILGIDIIRDRKNGVLRMSQ 323
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 238 bits (607), Expect = 2e-69
Identities = 118/178 (66%), Positives = 144/178 (80%), Gaps = 1/178 (0%)
Frame = +3
Query: 3 AQKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEG 182
+Q G+D+N++FSPVVKH+SIR LL++V D ELEQMDVKTAFLHGELEE IYM+QPEG
Sbjct: 799 SQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEG 858
Query: 183 YIVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIK-QEPEPTY 359
++V GKE VC L+KSLYGLKQSPRQWYKRFD+FM F R Y+SCVY+K + Y
Sbjct: 859 FVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIY 918
Query: 360 LLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIAA+D I ++K L EF+MKDLGAA+KILG+EITR+R +GKL+LSQ
Sbjct: 919 LLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQ 976
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 236 bits (603), Expect = 2e-69
Identities = 116/178 (65%), Positives = 144/178 (80%), Gaps = 1/178 (0%)
Frame = +3
Query: 3 AQKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEG 182
+Q +D+N++FSP+VKH+SIR LL++V D ELEQMDVKTAFLHGELEE IYM+QPEG
Sbjct: 632 SQIPSIDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEG 691
Query: 183 YIVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIK-QEPEPTY 359
++V GKE VC L+KSLYGLKQSPRQWYKRFD+FM F R Y++CVY+K + Y
Sbjct: 692 FVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCVYLKVVDGSAIY 751
Query: 360 LLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIAA+D IE++K L EF+MKDLGAA+KILG+EITR+R +GKL+LSQ
Sbjct: 752 LLLYVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQ 809
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 238 bits (606), Expect = 3e-69
Identities = 119/178 (66%), Positives = 145/178 (81%), Gaps = 1/178 (0%)
Frame = +3
Query: 3 AQKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEG 182
+Q GVDYN++FSPVVKH+SIR L++V DLELEQ+DVKTAFLHGELEE IYM QPEG
Sbjct: 891 SQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEG 950
Query: 183 YIVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIKQ-EPEPTY 359
+IV GKE+ VC L++SLYGLKQSPRQW KRFD+FM +F R +Y+SCVYIK P Y
Sbjct: 951 FIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGSPIY 1010
Query: 360 LLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIAA+ + I ++K LL EFDMKDLG+A+KILG+EI+RDR +G L+LSQ
Sbjct: 1011 LLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQ 1068
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]
Length = 1335
Score = 238 bits (606), Expect = 3e-69
Identities = 119/178 (66%), Positives = 145/178 (81%), Gaps = 1/178 (0%)
Frame = +3
Query: 3 AQKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEG 182
+Q GVDYN++FSPVVKH+SIR L++V DLELEQ+DVKTAFLHGELEE IYM QPEG
Sbjct: 893 SQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEG 952
Query: 183 YIVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIKQ-EPEPTY 359
+IV GKE+ VC L++SLYGLKQSPRQW KRFD+FM +F R +Y+SCVYIK P Y
Sbjct: 953 FIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGSPIY 1012
Query: 360 LLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIAA+ + I ++K LL EFDMKDLG+A+KILG+EI+RDR +G L+LSQ
Sbjct: 1013 LLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQ 1070
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1373
Score = 238 bits (606), Expect = 3e-69
Identities = 119/178 (66%), Positives = 145/178 (81%), Gaps = 1/178 (0%)
Frame = +3
Query: 3 AQKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEG 182
+Q GVDYN++FSPVVKH+SIR L++V DLELEQ+DVKTAFLHGELEE IYM QPEG
Sbjct: 891 SQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEG 950
Query: 183 YIVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIKQ-EPEPTY 359
+IV GKE+ VC L++SLYGLKQSPRQW KRFD+FM +F R +Y+SCVYIK P Y
Sbjct: 951 FIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIKHVNGSPIY 1010
Query: 360 LLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIAA+ + I ++K LL EFDMKDLG+A+KILG+EI+RDR +G L+LSQ
Sbjct: 1011 LLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQ 1068
>gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 530
Score = 228 bits (580), Expect = 4e-69
Identities = 109/179 (60%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Frame = +3
Query: 3 AQKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEG 182
+QKEG+DY+E+FSPVVKH +IR+LLA+V+ D++LEQ++VK AFLHG LEE++YM QP+G
Sbjct: 267 SQKEGIDYHEVFSPVVKHKTIRVLLAMVSALDMKLEQLNVKIAFLHGNLEEQVYMSQPDG 326
Query: 183 YIVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIKQEPEPT-- 356
++ GK+ VCLL+KSLYGLKQSPRQWYKRFD FM NF+R E+++CVY ++ + +
Sbjct: 327 FLEVGKKNHVCLLKKSLYGLKQSPRQWYKRFDAFMISYNFVRNEFDNCVYSRKLSDGSYI 386
Query: 357 YLLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
YLLLYVDD+LIAA+ I+ +K +L EF+MKDLG A+KILG+EI RDR AG L++SQ
Sbjct: 387 YLLLYVDDMLIAAKSKTDIDALKAMLSSEFEMKDLGTAKKILGMEIWRDRNAGLLYVSQ 445
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa]
Length = 1037
Score = 236 bits (601), Expect = 5e-69
Identities = 118/178 (66%), Positives = 143/178 (80%), Gaps = 1/178 (0%)
Frame = +3
Query: 3 AQKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEG 182
+Q G+D+N+IFSPVVKH+SIR LL++V D ELEQMDVKTAFLHGELEE IYM+QPEG
Sbjct: 648 SQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEG 707
Query: 183 YIVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIK-QEPEPTY 359
++V GKE VC L+KSLYGLKQSPRQWYKRFD+FM F R Y+SCVY+K + Y
Sbjct: 708 FVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIY 767
Query: 360 LLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIAA+D I ++K L EF+MKDLGAA+KILG+EITR+R + KL+LSQ
Sbjct: 768 LLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSDKLYLSQ 825
>gb|ASR75372.1| retrotransposon protein [Oryza nivara]
Length = 1170
Score = 236 bits (602), Expect = 7e-69
Identities = 120/178 (67%), Positives = 141/178 (79%), Gaps = 1/178 (0%)
Frame = +3
Query: 3 AQKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEG 182
+Q GVDYN++FSPVVKH+SIR ++V DLELEQ+DVKTAFLHGELEE+IYM QPEG
Sbjct: 800 SQIAGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEG 859
Query: 183 YIVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIK-QEPEPTY 359
+IV GKE VC L++SLYGLKQSPRQWYKRFD+FM F R E++SCVYIK P Y
Sbjct: 860 FIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFVNGSPIY 919
Query: 360 LLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIAA+ I +K L EFDMKDLGAA+KILG+EITRDR +G L+LSQ
Sbjct: 920 LLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQ 977
>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1032
Score = 235 bits (599), Expect = 9e-69
Identities = 116/179 (64%), Positives = 147/179 (82%), Gaps = 2/179 (1%)
Frame = +3
Query: 3 AQKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEG 182
AQKEG+DYNE+FSPVVKH+SIR+LLA+V Q D+EL QMDVKTAFLHG+LEE+IYM QPEG
Sbjct: 653 AQKEGIDYNEVFSPVVKHSSIRVLLALVAQLDMELVQMDVKTAFLHGDLEEEIYMTQPEG 712
Query: 183 YIVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIKQEPEPT-- 356
+ V GKE C L+KSLYGLKQSPRQWYKRFD FM + + R +Y+ CVY+++ + +
Sbjct: 713 FKVAGKENMFCKLEKSLYGLKQSPRQWYKRFDKFMLRQKYTRSKYDHCVYLRKLHDGSFI 772
Query: 357 YLLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
YLLLYVDD+LIA+++ IE++KT L EF+MKDLG A+KILG+EI+RDR G+L L+Q
Sbjct: 773 YLLLYVDDMLIASKNKEEIEKLKTQLNGEFEMKDLGEAKKILGMEISRDRKLGRLCLTQ 831
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa]
Length = 1205
Score = 236 bits (601), Expect = 1e-68
Identities = 118/178 (66%), Positives = 143/178 (80%), Gaps = 1/178 (0%)
Frame = +3
Query: 3 AQKEGVDYNEIFSPVVKHTSIRLLLAVVNQFDLELEQMDVKTAFLHGELEEKIYMKQPEG 182
+Q G+D+N+IFSPVVKH+SIR LL++V D ELEQMDVKTAFLHGELEE IYM+QPEG
Sbjct: 816 SQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEG 875
Query: 183 YIVDGKEQKVCLLQKSLYGLKQSPRQWYKRFDTFMEQANFIRCEYESCVYIK-QEPEPTY 359
++V GKE VC L+KSLYGLKQSPRQWYKRFD+FM F R Y+SCVY+K + Y
Sbjct: 876 FVVPGKENLVCRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIY 935
Query: 360 LLLYVDDILIAARDMLHIEEVKTLLRKEFDMKDLGAARKILGIEITRDRVAGKLWLSQ 533
LLLYVDD+LIAA+D I ++K L EF+MKDLGAA+KILG+EITR+R + KL+LSQ
Sbjct: 936 LLLYVDDMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSDKLYLSQ 993