BLASTX nr result

ID: Ophiopogon22_contig00016667 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00016667
         (436 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003564022.1| PREDICTED: U-box domain-containing protein 3...    56   2e-06

>ref|XP_003564022.1| PREDICTED: U-box domain-containing protein 39 [Brachypodium
           distachyon]
 gb|KQK18795.1| hypothetical protein BRADI_1g44740v3 [Brachypodium distachyon]
          Length = 535

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
 Frame = +2

Query: 2   AGAERVLLAMAGDDNMEGRGEVGKEMARRTLKVIRGDPEKGVML----MLGDEYYDEDGE 169
           AG E  L+ +A     EG G VG++MARRTL+ +RG+ +   ML    +LG E +D+DG 
Sbjct: 451 AGVEAALMPVA-----EGGGGVGRDMARRTLRAMRGEDDDAGMLAAAGILGRE-WDDDG- 503

Query: 170 VGTVVSDGLVSLRR 211
            G+VVS+GLVSLRR
Sbjct: 504 -GSVVSEGLVSLRR 516


Top