BLASTX nr result
ID: Ophiopogon22_contig00016579
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00016579
(537 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020249791.1| mediator of RNA polymerase II transcription ... 83 5e-15
ref|XP_006658903.1| PREDICTED: mediator of RNA polymerase II tra... 77 5e-13
ref|XP_020254459.1| mediator of RNA polymerase II transcription ... 76 8e-13
ref|XP_009397935.1| PREDICTED: mediator of RNA polymerase II tra... 76 8e-13
ref|XP_010907359.1| PREDICTED: mediator of RNA polymerase II tra... 76 8e-13
ref|XP_020254458.1| mediator of RNA polymerase II transcription ... 76 8e-13
ref|XP_020254457.1| mediator of RNA polymerase II transcription ... 76 8e-13
ref|XP_014752317.1| PREDICTED: mediator of RNA polymerase II tra... 75 2e-12
ref|XP_010235445.1| PREDICTED: mediator of RNA polymerase II tra... 75 2e-12
ref|XP_021307272.1| mediator of RNA polymerase II transcription ... 75 3e-12
ref|XP_002466024.1| mediator of RNA polymerase II transcription ... 75 3e-12
ref|XP_010918570.1| PREDICTED: mediator of RNA polymerase II tra... 74 5e-12
ref|XP_010918568.1| PREDICTED: mediator of RNA polymerase II tra... 74 5e-12
ref|XP_010918566.1| PREDICTED: mediator of RNA polymerase II tra... 74 5e-12
ref|XP_020094271.1| mediator of RNA polymerase II transcription ... 74 7e-12
gb|OAY75728.1| Mediator of RNA polymerase II transcription subun... 74 7e-12
ref|XP_009379762.1| PREDICTED: mediator of RNA polymerase II tra... 74 7e-12
ref|XP_020094270.1| mediator of RNA polymerase II transcription ... 74 7e-12
ref|XP_020094268.1| mediator of RNA polymerase II transcription ... 74 7e-12
ref|XP_020598943.1| mediator of RNA polymerase II transcription ... 74 7e-12
>ref|XP_020249791.1| mediator of RNA polymerase II transcription subunit 12-like
[Asparagus officinalis]
gb|ONK55508.1| uncharacterized protein A4U43_UnF2100 [Asparagus officinalis]
Length = 2224
Score = 82.8 bits (203), Expect = 5e-15
Identities = 38/42 (90%), Positives = 40/42 (95%)
Frame = +1
Query: 1 SSNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
SS+NMG V+GDHANLKACSWLKGAVRVRRTDLTYVG LDDDS
Sbjct: 2183 SSSNMGTVNGDHANLKACSWLKGAVRVRRTDLTYVGTLDDDS 2224
>ref|XP_006658903.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Oryza brachyantha]
Length = 2198
Score = 77.0 bits (188), Expect = 5e-13
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = +1
Query: 4 SNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
SNN AV+GDH NLKACSWLKGAVRVRRT+LTY+G+LDDDS
Sbjct: 2158 SNNSSAVAGDHGNLKACSWLKGAVRVRRTELTYIGSLDDDS 2198
>ref|XP_020254459.1| mediator of RNA polymerase II transcription subunit 12-like isoform
X3 [Asparagus officinalis]
Length = 2221
Score = 76.3 bits (186), Expect = 8e-13
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = +1
Query: 1 SSNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
+S N+ V+GDHANLKACSWLKGAVRVRR DLTYVGALDDDS
Sbjct: 2180 NSGNVSKVNGDHANLKACSWLKGAVRVRRRDLTYVGALDDDS 2221
>ref|XP_009397935.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Musa acuminata subsp. malaccensis]
Length = 2221
Score = 76.3 bits (186), Expect = 8e-13
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +1
Query: 1 SSNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
S +NMG SGDH+NLKACSWLKG VRV+RTDLTY+GALD+DS
Sbjct: 2180 SGSNMGGTSGDHSNLKACSWLKGTVRVQRTDLTYIGALDEDS 2221
>ref|XP_010907359.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Elaeis guineensis]
ref|XP_010907360.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Elaeis guineensis]
ref|XP_019702408.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Elaeis guineensis]
ref|XP_019702409.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Elaeis guineensis]
Length = 2235
Score = 76.3 bits (186), Expect = 8e-13
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = +1
Query: 1 SSNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
+SN +G GDH+NLKACSWLKGAVRVRRTDLTYVGALDDDS
Sbjct: 2194 NSNMIGVGGGDHSNLKACSWLKGAVRVRRTDLTYVGALDDDS 2235
>ref|XP_020254458.1| mediator of RNA polymerase II transcription subunit 12-like isoform
X2 [Asparagus officinalis]
Length = 2238
Score = 76.3 bits (186), Expect = 8e-13
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = +1
Query: 1 SSNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
+S N+ V+GDHANLKACSWLKGAVRVRR DLTYVGALDDDS
Sbjct: 2197 NSGNVSKVNGDHANLKACSWLKGAVRVRRRDLTYVGALDDDS 2238
>ref|XP_020254457.1| mediator of RNA polymerase II transcription subunit 12-like isoform
X1 [Asparagus officinalis]
gb|ONK78252.1| uncharacterized protein A4U43_C02F16240 [Asparagus officinalis]
Length = 2241
Score = 76.3 bits (186), Expect = 8e-13
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = +1
Query: 1 SSNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
+S N+ V+GDHANLKACSWLKGAVRVRR DLTYVGALDDDS
Sbjct: 2200 NSGNVSKVNGDHANLKACSWLKGAVRVRRRDLTYVGALDDDS 2241
>ref|XP_014752317.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
isoform X2 [Brachypodium distachyon]
Length = 2176
Score = 75.5 bits (184), Expect = 2e-12
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +1
Query: 4 SNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
SN +SGDHANLKACSWLKGAVRVRRT+LTY+G+LDDDS
Sbjct: 2136 SNGTSGISGDHANLKACSWLKGAVRVRRTELTYIGSLDDDS 2176
>ref|XP_010235445.1| PREDICTED: mediator of RNA polymerase II transcription subunit 12
isoform X1 [Brachypodium distachyon]
gb|KQK15196.1| hypothetical protein BRADI_1g21177v3 [Brachypodium distachyon]
Length = 2178
Score = 75.5 bits (184), Expect = 2e-12
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +1
Query: 4 SNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
SN +SGDHANLKACSWLKGAVRVRRT+LTY+G+LDDDS
Sbjct: 2138 SNGTSGISGDHANLKACSWLKGAVRVRRTELTYIGSLDDDS 2178
>ref|XP_021307272.1| mediator of RNA polymerase II transcription subunit 12 isoform X2
[Sorghum bicolor]
Length = 2199
Score = 74.7 bits (182), Expect = 3e-12
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +1
Query: 4 SNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
SN V+GDHANLKACSWLKGAVRVRRT+LTY+G+LDDDS
Sbjct: 2159 SNGASGVTGDHANLKACSWLKGAVRVRRTELTYIGSLDDDS 2199
>ref|XP_002466024.1| mediator of RNA polymerase II transcription subunit 12 isoform X1
[Sorghum bicolor]
ref|XP_021307271.1| mediator of RNA polymerase II transcription subunit 12 isoform X1
[Sorghum bicolor]
gb|EER93022.1| hypothetical protein SORBI_3001G540400 [Sorghum bicolor]
Length = 2201
Score = 74.7 bits (182), Expect = 3e-12
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +1
Query: 4 SNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
SN V+GDHANLKACSWLKGAVRVRRT+LTY+G+LDDDS
Sbjct: 2161 SNGASGVTGDHANLKACSWLKGAVRVRRTELTYIGSLDDDS 2201
>ref|XP_010918570.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X3 [Elaeis guineensis]
Length = 1917
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +1
Query: 4 SNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
+NNM V GDH+NLKACSWLKGAVRVRR DLTY+GALD+DS
Sbjct: 1877 NNNMLGVGGDHSNLKACSWLKGAVRVRRKDLTYIGALDEDS 1917
>ref|XP_010918568.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X2 [Elaeis guineensis]
Length = 2213
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +1
Query: 4 SNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
+NNM V GDH+NLKACSWLKGAVRVRR DLTY+GALD+DS
Sbjct: 2173 NNNMLGVGGDHSNLKACSWLKGAVRVRRKDLTYIGALDEDS 2213
>ref|XP_010918566.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like isoform X1 [Elaeis guineensis]
Length = 2233
Score = 73.9 bits (180), Expect = 5e-12
Identities = 33/41 (80%), Positives = 37/41 (90%)
Frame = +1
Query: 4 SNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
+NNM V GDH+NLKACSWLKGAVRVRR DLTY+GALD+DS
Sbjct: 2193 NNNMLGVGGDHSNLKACSWLKGAVRVRRKDLTYIGALDEDS 2233
>ref|XP_020094271.1| mediator of RNA polymerase II transcription subunit 12 isoform X3
[Ananas comosus]
Length = 2201
Score = 73.6 bits (179), Expect = 7e-12
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +1
Query: 4 SNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
+ +MG VS DHAN KACSWLKGA+RVRRTDLTY GALDDDS
Sbjct: 2161 NGSMGGVSVDHANFKACSWLKGAIRVRRTDLTYTGALDDDS 2201
>gb|OAY75728.1| Mediator of RNA polymerase II transcription subunit 12 [Ananas
comosus]
Length = 2222
Score = 73.6 bits (179), Expect = 7e-12
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +1
Query: 4 SNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
+ +MG VS DHAN KACSWLKGA+RVRRTDLTY GALDDDS
Sbjct: 2182 NGSMGGVSVDHANFKACSWLKGAIRVRRTDLTYTGALDDDS 2222
>ref|XP_009379762.1| PREDICTED: mediator of RNA polymerase II transcription subunit
12-like [Musa acuminata subsp. malaccensis]
Length = 2224
Score = 73.6 bits (179), Expect = 7e-12
Identities = 31/42 (73%), Positives = 38/42 (90%)
Frame = +1
Query: 1 SSNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
+S+NMG+ +GDH+NLKAC WLKG VRVRRTDLTY+G LD+DS
Sbjct: 2183 NSSNMGSTNGDHSNLKACCWLKGTVRVRRTDLTYIGPLDEDS 2224
>ref|XP_020094270.1| mediator of RNA polymerase II transcription subunit 12 isoform X2
[Ananas comosus]
Length = 2231
Score = 73.6 bits (179), Expect = 7e-12
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +1
Query: 4 SNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
+ +MG VS DHAN KACSWLKGA+RVRRTDLTY GALDDDS
Sbjct: 2191 NGSMGGVSVDHANFKACSWLKGAIRVRRTDLTYTGALDDDS 2231
>ref|XP_020094268.1| mediator of RNA polymerase II transcription subunit 12 isoform X1
[Ananas comosus]
ref|XP_020094269.1| mediator of RNA polymerase II transcription subunit 12 isoform X1
[Ananas comosus]
Length = 2234
Score = 73.6 bits (179), Expect = 7e-12
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +1
Query: 4 SNNMGAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
+ +MG VS DHAN KACSWLKGA+RVRRTDLTY GALDDDS
Sbjct: 2194 NGSMGGVSVDHANFKACSWLKGAIRVRRTDLTYTGALDDDS 2234
>ref|XP_020598943.1| mediator of RNA polymerase II transcription subunit 12 [Phalaenopsis
equestris]
ref|XP_020598944.1| mediator of RNA polymerase II transcription subunit 12 [Phalaenopsis
equestris]
ref|XP_020598945.1| mediator of RNA polymerase II transcription subunit 12 [Phalaenopsis
equestris]
ref|XP_020598946.1| mediator of RNA polymerase II transcription subunit 12 [Phalaenopsis
equestris]
Length = 2242
Score = 73.6 bits (179), Expect = 7e-12
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = +1
Query: 16 GAVSGDHANLKACSWLKGAVRVRRTDLTYVGALDDDS 126
G+VSGDH+NLKACSWLKGAVR+RRTDLTYVG LDD+S
Sbjct: 2206 GSVSGDHSNLKACSWLKGAVRIRRTDLTYVGVLDDES 2242