BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00013525
         (599 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020256135.1| pentatricopeptide repeat-containing protein ...   263   3e-82
ref|XP_010935993.1| PREDICTED: pentatricopeptide repeat-containi...   230   9e-70
ref|XP_008776505.1| PREDICTED: pentatricopeptide repeat-containi...   220   4e-66
ref|XP_009408480.1| PREDICTED: pentatricopeptide repeat-containi...   206   2e-60
ref|XP_015689980.1| PREDICTED: pentatricopeptide repeat-containi...   201   4e-59
ref|XP_023877683.1| pentatricopeptide repeat-containing protein ...   200   5e-58
ref|XP_020201533.1| pentatricopeptide repeat-containing protein ...   198   1e-57
ref|XP_002464205.1| pentatricopeptide repeat-containing protein ...   197   3e-57
gb|PAN46046.1| hypothetical protein PAHAL_I02489 [Panicum hallii]     197   3e-57
ref|XP_010243684.1| PREDICTED: pentatricopeptide repeat-containi...   197   9e-57
ref|XP_008665107.2| pentatricopeptide repeat-containing protein ...   194   6e-56
gb|ONM07144.1| Pentatricopeptide repeat-containing protein chlor...   194   6e-56
ref|XP_018860034.1| PREDICTED: pentatricopeptide repeat-containi...   194   8e-56
ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containi...   193   3e-55
ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containi...   192   4e-55
dbj|BAJ90212.1| predicted protein [Hordeum vulgare subsp. vulgar...   191   8e-55
gb|EEC75797.1| hypothetical protein OsI_12731 [Oryza sativa Indi...   190   2e-54
ref|XP_015628755.1| PREDICTED: pentatricopeptide repeat-containi...   190   2e-54
ref|XP_024180280.1| pentatricopeptide repeat-containing protein ...   190   2e-54
ref|XP_006437177.1| pentatricopeptide repeat-containing protein ...   189   4e-54

>ref|XP_020256135.1| pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Asparagus officinalis]
 gb|ONK74371.1| uncharacterized protein A4U43_C03F5540 [Asparagus officinalis]
          Length = 541

 Score =  263 bits (671), Expect = 3e-82
 Identities = 130/180 (72%), Positives = 149/180 (82%)
 Frame = +1

Query: 58  HPPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLH 237
           HP LTLLE+KCT+M  LHQIH+ I K+GLA DP A SRL NFC  S  G+L+YA+LLF H
Sbjct: 22  HPSLTLLESKCTSMRDLHQIHTQIIKTGLAKDPFAISRLHNFCTNSAFGNLNYAILLFSH 81

Query: 238 TPNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLFTAYAQLGTAREG 417
           T NPT FM+N+L+R+L+KSS PH AISLF  ML SPTQPQRLTYPSLF AYAQL +AREG
Sbjct: 82  TQNPTPFMWNSLIRSLSKSSAPHLAISLFIDMLHSPTQPQRLTYPSLFVAYAQLCSAREG 141

Query: 418 AGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAKK 597
           A AHGL +K GLDSD YV NS ISMYATCG+L EA RLFDDC+EFDLVP+NSM++GLAKK
Sbjct: 142 AQAHGLVVKHGLDSDRYVLNSMISMYATCGYLPEAYRLFDDCNEFDLVPYNSMIMGLAKK 201


>ref|XP_010935993.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Elaeis guineensis]
          Length = 533

 Score =  230 bits (587), Expect = 9e-70
 Identities = 110/179 (61%), Positives = 135/179 (75%)
 Frame = +1

Query: 58  HPPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLH 237
           H PL++LETKCT M  LHQ+HS I K+GLA D +A SR+L FCA SP GDL+YA+LLF H
Sbjct: 21  HTPLSMLETKCTNMRDLHQLHSQIIKTGLAKDTIAISRVLAFCATSPYGDLNYAMLLFSH 80

Query: 238 TPNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLFTAYAQLGTAREG 417
            P+P +FM+NTL+R L++SS PH AIS F  ML SPTQPQR TYPS+F AY+ LG A  G
Sbjct: 81  QPHPNAFMWNTLIRGLSQSSTPHLAISHFVDMLHSPTQPQRTTYPSIFVAYSHLGLAHHG 140

Query: 418 AGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
           A  HG+ +K G  SD Y+RNS +SMYA CG + EA RLFD+C  FD+V  NSM++GLAK
Sbjct: 141 AQLHGMVVKLGHASDPYIRNSMLSMYANCGHITEASRLFDECSSFDVVSWNSMIMGLAK 199


>ref|XP_008776505.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Phoenix dactylifera]
          Length = 508

 Score =  220 bits (561), Expect = 4e-66
 Identities = 106/174 (60%), Positives = 129/174 (74%)
 Frame = +1

Query: 73  LLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLHTPNPT 252
           +LETKCT M  LHQ+HS I K+GLA D +A SR+L FCA SP GDL+YA+LLF H P P 
Sbjct: 1   MLETKCTNMRDLHQLHSQIIKTGLAKDTIAISRVLAFCATSPYGDLNYAMLLFSHHPQPN 60

Query: 253 SFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLFTAYAQLGTAREGAGAHG 432
           +FM+NTL+R L++SS PH AISLF  ML SP QPQR TYPSLF AY+ LG A  GA  HG
Sbjct: 61  AFMWNTLIRGLSRSSTPHLAISLFFDMLHSPEQPQRTTYPSLFVAYSHLGLAHHGAQLHG 120

Query: 433 LALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
           + +K G  SD Y+RNS +SMYA CG + EA RLF++C  FD+   NSM++GLAK
Sbjct: 121 MVVKLGHASDPYIRNSMLSMYANCGHITEASRLFNECSSFDVASWNSMIMGLAK 174



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 31/208 (14%)
 Frame = +1

Query: 58  HPPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLH 237
           +P L +  +      H  Q+H ++ K G A+DP   + +L+  A    G ++ A  LF  
Sbjct: 99  YPSLFVAYSHLGLAHHGAQLHGMVVKLGHASDPYIRNSMLSMYANC--GHITEASRLFNE 156

Query: 238 TPNPTSFMYNTLLRALAKSSVPHR-------------------------------AISLF 324
             +     +N+++  LAK+S+                                  A+ LF
Sbjct: 157 CSSFDVASWNSMIMGLAKNSLVDDSRHLFDEMSFRSVVTWSAMISGYVRNGRNKDALDLF 216

Query: 325 RRMLRSPTQPQRLTYPSLFTAYAQLGTAREGAGAHGLALKSGLDSDAYVRNSTISMYATC 504
            +M +   +P   T  SL  A A LG   +G   H    K  ++ ++ V  + I MY  C
Sbjct: 217 HQMQKEGVKPNANTLVSLLGACAGLGALEQGEWIHACIEKHNIELNSIVITAIIDMYCKC 276

Query: 505 GWLDEACRLFDDCDEFDLVPHNSMVIGL 588
           G +D+A  +F++     L   NSM++GL
Sbjct: 277 GSIDKALEVFENASIKGLSSWNSMILGL 304


>ref|XP_009408480.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 546

 Score =  206 bits (525), Expect = 2e-60
 Identities = 104/180 (57%), Positives = 128/180 (71%), Gaps = 1/180 (0%)
 Frame = +1

Query: 58  HPPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLH 237
           H  L++LETKC +M  LH++HS + K+GLA D +A SR+L FCA SP+GDL+YA+ LF H
Sbjct: 21  HTLLSMLETKCNSMRDLHRLHSQLIKTGLARDHIAISRVLAFCATSPNGDLNYAMRLFFH 80

Query: 238 TPNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLFTAYAQLGTARE- 414
              P +FMYNTL+R L+ SS PH AISLF  ML SP  PQRLT+PSLF A + LG A   
Sbjct: 81  HHQPNAFMYNTLIRGLSHSSTPHLAISLFLDMLHSPIPPQRLTFPSLFIACSHLGLAAHC 140

Query: 415 GAGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
           GA  HG+A K G  SD YVRNS +SMYA CG +  + RLFD+C  FD+V  NSM+ GLAK
Sbjct: 141 GAQLHGMAFKLGHASDPYVRNSMLSMYANCGCISMSSRLFDECSSFDVVRWNSMITGLAK 200


>ref|XP_015689980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Oryza brachyantha]
          Length = 451

 Score =  201 bits (510), Expect = 4e-59
 Identities = 100/179 (55%), Positives = 124/179 (69%)
 Frame = +1

Query: 58  HPPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLH 237
           HP LTLL T+C +M HLHQ+H+ + KSGLA  P+AASR + FCA     D +YA  L  H
Sbjct: 32  HPVLTLLHTQCASMAHLHQLHAALVKSGLARAPIAASRAVAFCAGD-GRDTAYAARLVRH 90

Query: 238 TPNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLFTAYAQLGTAREG 417
            P P +FM+NT +RALA    P  A++LF  ML SPTQP+R T+PSLF AYA+LG A +G
Sbjct: 91  HPRPNAFMWNTAIRALADGPGPDAAVALFVDMLGSPTQPERRTFPSLFAAYARLGRAGDG 150

Query: 418 AGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
           AG HG+ LK GL  DAYVRNS I+MYA+CG  DEA  L   C+EFD V  NS ++ LA+
Sbjct: 151 AGLHGMVLKLGLGGDAYVRNSMIAMYASCGAADEALALLGRCEEFDAVACNSAIVALAR 209


>ref|XP_023877683.1| pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Quercus suber]
          Length = 539

 Score =  200 bits (508), Expect = 5e-58
 Identities = 100/179 (55%), Positives = 130/179 (72%), Gaps = 1/179 (0%)
 Frame = +1

Query: 61  PPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLHT 240
           P LT+LE +CT M  L +IH+ + K+GLA D +AASR+L FCA SP+GD++YA LLF H 
Sbjct: 26  PYLTMLEKQCTNMKDLQKIHANLIKTGLAKDTIAASRILAFCA-SPAGDMNYAYLLFTHI 84

Query: 241 PNPTSFMYNTLLRALAKSSVPHRAISLFRRML-RSPTQPQRLTYPSLFTAYAQLGTAREG 417
            NP  F +NT++R  ++SS PH AISLF  ML  SP +PQRLTYPS+F AY QLG A +G
Sbjct: 85  QNPNLFAWNTIIRGFSQSSTPHNAISLFIDMLISSPIEPQRLTYPSVFKAYTQLGLAHDG 144

Query: 418 AGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
           A  HG  +K GL+SD ++RN+ + MY  CG+L EA ++FD   EFD+V  NSM+IGLAK
Sbjct: 145 AQLHGRIIKEGLESDPFIRNTILYMYMNCGFLSEARQMFDKDKEFDVVAWNSMIIGLAK 203



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 29/189 (15%)
 Frame = +1

Query: 112 QIHSLITKSGLANDPVAASRLLNF-----------------------------CAASPSG 204
           Q+H  I K GL +DP   + +L                                  +  G
Sbjct: 146 QLHGRIIKEGLESDPFIRNTILYMYMNCGFLSEARQMFDKDKEFDVVAWNSMIIGLAKYG 205

Query: 205 DLSYAVLLFLHTPNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLFT 384
           ++  +  LF       +  +N+++    ++     A+ LF +M     +P   T  SL  
Sbjct: 206 EIHESRRLFERMQFRNAVSWNSMISGYVRNGKLMEALELFGKMQEKRIKPSEFTMVSLLN 265

Query: 385 AYAQLGTAREGAGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVP 564
           A A+LG  R+G   H    K+  + +  V  + I MY  CG +++A + F+   +  L  
Sbjct: 266 ACARLGALRQGEWIHDFIRKNDFELNVIVSTAIIDMYCKCGTIEKALQTFEAAPKKGLPC 325

Query: 565 HNSMVIGLA 591
            NSM+ GLA
Sbjct: 326 WNSMIFGLA 334


>ref|XP_020201533.1| pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Aegilops tauschii subsp. tauschii]
          Length = 522

 Score =  198 bits (504), Expect = 1e-57
 Identities = 97/179 (54%), Positives = 123/179 (68%)
 Frame = +1

Query: 58  HPPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLH 237
           HP LTLL T+C TM HL Q+H+ + KSGLA DP+AASR + FCA     D +YA  +  H
Sbjct: 34  HPALTLLHTQCATMAHLRQLHAALVKSGLAKDPIAASRAVAFCAGE-GRDAAYAARIVRH 92

Query: 238 TPNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLFTAYAQLGTAREG 417
            P P SFM+NT++RAL+    P  A++LF  MLRSPT P+R T+PSLF AYA+LG A +G
Sbjct: 93  HPRPNSFMWNTVIRALSDGPGPDAAVALFVDMLRSPTPPERRTFPSLFAAYARLGRADDG 152

Query: 418 AGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
           A  HG+ LK GL  DAY RNS I+MYA+CG  DEA  LF  C  FD+V  NS ++ L++
Sbjct: 153 AALHGMVLKLGLAGDAYTRNSMIAMYASCGRADEALALFGQCQVFDIVSCNSAIVALSR 211


>ref|XP_002464205.1| pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Sorghum bicolor]
 gb|OQU91310.1| hypothetical protein SORBI_3001G161100 [Sorghum bicolor]
          Length = 521

 Score =  197 bits (502), Expect = 3e-57
 Identities = 99/178 (55%), Positives = 124/178 (69%)
 Frame = +1

Query: 61  PPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLHT 240
           P LTLL T+C +M HL Q+H+ + KSGLA DP+AASR + FCA  P  D+SYA  L  H 
Sbjct: 34  PALTLLHTRCASMAHLRQLHAALVKSGLAKDPIAASRAVAFCAG-PGRDVSYAERLVRHH 92

Query: 241 PNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLFTAYAQLGTAREGA 420
           P P SFM+NT++RAL+  + P  A++LF  ML SPT P+R T PSL  AYA+LG A +GA
Sbjct: 93  PRPNSFMWNTVIRALSDGARPEAAVALFVDMLGSPTPPERRTLPSLLAAYARLGRAGDGA 152

Query: 421 GAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
             HG+ALK GL  DAYVRN+TI+MYA+C   DEA  LF  C EFD V  NS ++ LA+
Sbjct: 153 ALHGMALKLGLAGDAYVRNATIAMYASCARADEALALFGQCPEFDAVACNSAIVALAR 210


>gb|PAN46046.1| hypothetical protein PAHAL_I02489 [Panicum hallii]
          Length = 524

 Score =  197 bits (502), Expect = 3e-57
 Identities = 96/178 (53%), Positives = 127/178 (71%)
 Frame = +1

Query: 61  PPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLHT 240
           P LTLL T+C +M HL Q+H+ + KSGLA DP+AASR ++FCA  P  D++YA  +  H 
Sbjct: 36  PALTLLHTRCASMAHLRQLHAALVKSGLAKDPIAASRAVSFCAG-PGRDVAYAERIVRHH 94

Query: 241 PNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLFTAYAQLGTAREGA 420
           P P SFM+NT++RAL+  + P  A++LF  ML SPT P+R T PS+F AYA+LG A  GA
Sbjct: 95  PRPNSFMWNTVIRALSDGARPEAAVALFVDMLGSPTPPERRTLPSVFAAYARLGRAGAGA 154

Query: 421 GAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
             HG+ALK GL  DAYVRN+ I+MYA+CG  DEA  LF  C EFD+V  NS+++ L++
Sbjct: 155 ALHGMALKLGLAGDAYVRNAAIAMYASCGRADEALALFGQCPEFDVVACNSVIVALSR 212


>ref|XP_010243684.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Nelumbo nucifera]
          Length = 547

 Score =  197 bits (500), Expect = 9e-57
 Identities = 100/180 (55%), Positives = 130/180 (72%), Gaps = 1/180 (0%)
 Frame = +1

Query: 58  HPPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLH 237
           HP L++LE +CT M+ L ++H+ I K+GLA D +AASR+L F A SP+GD++YA  +F  
Sbjct: 23  HPSLSMLEKRCTNMSDLQKLHAHIIKTGLAKDTIAASRVLAFSATSPAGDINYAYSVFSQ 82

Query: 238 TPNPTSFMYNTLLRALAKSSVPHRAISLFRRMLR-SPTQPQRLTYPSLFTAYAQLGTARE 414
             NP  F +NT++R  ++SS P RAISLF  ML+ SP +PQRLTYPSLF AYAQLG A +
Sbjct: 83  IQNPNLFTWNTIIRGFSQSSTPLRAISLFTDMLQSSPIEPQRLTYPSLFKAYAQLGLAHD 142

Query: 415 GAGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
           G   HG  +K GL+SD ++RN+ I MYATCG+L EACRLF D    D+V  NSM+ GLAK
Sbjct: 143 GTQLHGRIIKLGLESDPFIRNTIIFMYATCGFLIEACRLF-DVSNSDVVAWNSMITGLAK 201



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 28/188 (14%)
 Frame = +1

Query: 112 QIHSLITKSGLANDP----------------VAASRLLN------------FCAASPSGD 207
           Q+H  I K GL +DP                + A RL +                +  G+
Sbjct: 145 QLHGRIIKLGLESDPFIRNTIIFMYATCGFLIEACRLFDVSNSDVVAWNSMITGLAKFGE 204

Query: 208 LSYAVLLFLHTPNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLFTA 387
           +  +  LF   P  ++  +N+++    ++     A+ LF  M +   +P   T  SL  A
Sbjct: 205 IDQSRRLFDKMPKRSTISWNSMISGYVRNGNFKEAMDLFDEMQKEGIKPSGFTIVSLLNA 264

Query: 388 YAQLGTAREGAGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPH 567
            + LG   +G   H    K+ +++++ V  + I MY  CG +D+A ++F+   E  L   
Sbjct: 265 CSGLGALEQGEWLHTYIEKNEIETNSIVSTAIIDMYCKCGCVDKALQVFETISEKGLSCW 324

Query: 568 NSMVIGLA 591
           NSM++GLA
Sbjct: 325 NSMILGLA 332


>ref|XP_008665107.2| pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Zea mays]
          Length = 522

 Score =  194 bits (493), Expect = 6e-56
 Identities = 96/178 (53%), Positives = 124/178 (69%)
 Frame = +1

Query: 61  PPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLHT 240
           P LTLL T+C +M HL Q+H+ + KSGLA DP+AASR + FCA  P  D+ YA  L  H 
Sbjct: 35  PALTLLHTRCVSMAHLRQLHAALVKSGLAKDPIAASRAVAFCAG-PGRDVLYAERLVRHH 93

Query: 241 PNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLFTAYAQLGTAREGA 420
           P P SFM+NT++RAL+  + P  A++LF  ML SPT P R ++PSL  AYA+LG A +G 
Sbjct: 94  PRPNSFMWNTVIRALSDGARPDAAVALFVDMLSSPTPPDRRSFPSLLAAYARLGRAGDGE 153

Query: 421 GAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
             HG+ALK GL  DAYVRN+TI+MYA+CG  DEA  LF  C E D+V  NS+++ LA+
Sbjct: 154 ALHGMALKLGLAGDAYVRNATIAMYASCGRADEALALFGQCPELDVVACNSVIVALAR 211


>gb|ONM07144.1| Pentatricopeptide repeat-containing protein chloroplastic [Zea
           mays]
          Length = 524

 Score =  194 bits (493), Expect = 6e-56
 Identities = 96/178 (53%), Positives = 124/178 (69%)
 Frame = +1

Query: 61  PPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLHT 240
           P LTLL T+C +M HL Q+H+ + KSGLA DP+AASR + FCA  P  D+ YA  L  H 
Sbjct: 37  PALTLLHTRCVSMAHLRQLHAALVKSGLAKDPIAASRAVAFCAG-PGRDVLYAERLVRHH 95

Query: 241 PNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLFTAYAQLGTAREGA 420
           P P SFM+NT++RAL+  + P  A++LF  ML SPT P R ++PSL  AYA+LG A +G 
Sbjct: 96  PRPNSFMWNTVIRALSDGARPDAAVALFVDMLSSPTPPDRRSFPSLLAAYARLGRAGDGE 155

Query: 421 GAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
             HG+ALK GL  DAYVRN+TI+MYA+CG  DEA  LF  C E D+V  NS+++ LA+
Sbjct: 156 ALHGMALKLGLAGDAYVRNATIAMYASCGRADEALALFGQCPELDVVACNSVIVALAR 213


>ref|XP_018860034.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Juglans regia]
          Length = 536

 Score =  194 bits (493), Expect = 8e-56
 Identities = 98/179 (54%), Positives = 130/179 (72%), Gaps = 1/179 (0%)
 Frame = +1

Query: 61  PPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLHT 240
           P LT+L+  CTTM  L +IH+ + K+GL+ND +AASR+L FCA SP+GD++YA L+F H 
Sbjct: 23  PYLTMLDKHCTTMRDLRKIHASLIKTGLSNDTIAASRILTFCA-SPAGDMNYAYLVFTHI 81

Query: 241 PNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRS-PTQPQRLTYPSLFTAYAQLGTAREG 417
            NP  F++NT++R  ++SS P +A+ LF  ML S P +PQRLTYPSLF AY QLG A EG
Sbjct: 82  QNPNIFIWNTIIRGFSQSSTPQKALFLFIEMLMSSPVEPQRLTYPSLFKAYTQLGLAHEG 141

Query: 418 AGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
           A  HG  +K GL++D ++RNS + MY+  G L EA RLFD+  E D+V  NSM+IGLAK
Sbjct: 142 AQLHGRIIKLGLENDPFIRNSILHMYSNGGCLSEARRLFDEDIESDVVAWNSMIIGLAK 200



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 29/189 (15%)
 Frame = +1

Query: 112 QIHSLITKSGLANDPVAASRLLNFCA-----------------------------ASPSG 204
           Q+H  I K GL NDP   + +L+  +                              +  G
Sbjct: 143 QLHGRIIKLGLENDPFIRNSILHMYSNGGCLSEARRLFDEDIESDVVAWNSMIIGLAKCG 202

Query: 205 DLSYAVLLFLHTPNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLFT 384
           ++  +  LF   P+  +  +NT++    ++ +   A+ LF +M     +P   T  SL  
Sbjct: 203 EIHESRRLFDKIPSRNTVSWNTMISGCVRNGMFMEALELFSKMQEENIEPSEFTMVSLLN 262

Query: 385 AYAQLGTAREGAGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVP 564
           A A+LG  ++G   H   +K+  + +  V  + I MY  CG +++A + F    +  L  
Sbjct: 263 ACARLGALKQGEWVHDYIMKNNFELNIIVITAIIDMYCKCGSIEKALQTFVATPKRGLSC 322

Query: 565 HNSMVIGLA 591
            NSM+ GLA
Sbjct: 323 WNSMIFGLA 331


>ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Fragaria vesca subsp. vesca]
          Length = 550

 Score =  193 bits (490), Expect = 3e-55
 Identities = 100/179 (55%), Positives = 131/179 (73%), Gaps = 1/179 (0%)
 Frame = +1

Query: 61  PPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLHT 240
           P L +LE +CT M  L +IH+ + K+GLAND VAASR+L FCA SP+GD++YA ++F H 
Sbjct: 22  PHLFMLENQCTNMKDLQKIHAHLIKTGLANDTVAASRVLAFCA-SPAGDINYAYMVFRHI 80

Query: 241 PNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPT-QPQRLTYPSLFTAYAQLGTAREG 417
            NP  F++NT++R  + SS P  AISLF  ML + T QPQRLTYPS+F AYAQLG A +G
Sbjct: 81  HNPNLFIWNTIIRGFSNSSNPEAAISLFIDMLVTSTVQPQRLTYPSVFKAYAQLGLAHDG 140

Query: 418 AGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
           A  HG  +K GL+SD +VRN+ I MY+ CG L EA R+FD+  EFD+V  NSM++GL+K
Sbjct: 141 AQLHGRVVKLGLESDQFVRNTIIHMYSNCGLLSEARRVFDEDLEFDIVAWNSMIMGLSK 199



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/133 (28%), Positives = 66/133 (49%)
 Frame = +1

Query: 193 SPSGDLSYAVLLFLHTPNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYP 372
           S  G++  +  LF   P   S  +N+++    ++ +   A+ LF  M +   +P   T  
Sbjct: 198 SKCGEVGESRRLFDKMPQRNSISWNSMIGGSVRNGMYTEALDLFGEMQKQKIKPSEFTMV 257

Query: 373 SLFTAYAQLGTAREGAGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEF 552
           SL  A AQLG  R+G   H    K+ +  +  V  + I+MY+ CG +++A  +F+     
Sbjct: 258 SLLNASAQLGAIRQGEWIHEYIRKNHIQLNPIVVTAIINMYSKCGSIEKAVHVFEAAPRT 317

Query: 553 DLVPHNSMVIGLA 591
            L   NS+++GLA
Sbjct: 318 GLSCWNSIIMGLA 330


>ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Citrus sinensis]
 dbj|GAY50806.1| hypothetical protein CUMW_129560 [Citrus unshiu]
          Length = 534

 Score =  192 bits (488), Expect = 4e-55
 Identities = 99/180 (55%), Positives = 130/180 (72%), Gaps = 2/180 (1%)
 Frame = +1

Query: 61  PPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLHT 240
           P L+LL+ +CT+M  L +IH+ + K+GLA DP+AASR+L FC  SP+GD++YA L+F   
Sbjct: 21  PLLSLLDKQCTSMKDLKKIHAHLIKTGLAKDPIAASRILTFCT-SPAGDINYAYLVFTQI 79

Query: 241 PNPTSFMYNTLLRALAKSSVPHRAISLFRRML-RSPTQPQRLTYPSLFTAYAQLGTAREG 417
             P  F++NT++R  ++SS P  AI LF  ML  SP QPQRLTYPSLF AYAQLG AR+G
Sbjct: 80  KKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDG 139

Query: 418 AGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCD-EFDLVPHNSMVIGLAK 594
           A  HG  +K GL+ D ++ N+ I MYA CG+L EA  +FD+ D EFD+V  NSM+IGLAK
Sbjct: 140 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAK 199



 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 36/130 (27%), Positives = 61/130 (46%)
 Frame = +1

Query: 202 GDLSYAVLLFLHTPNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLF 381
           G++  +  LF    +  +  +N+++    ++     A+ LFR M     +P   T  SL 
Sbjct: 201 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 260

Query: 382 TAYAQLGTAREGAGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLV 561
            A A+LG  R+G   H   + +  + +  V  + I MY  CG  + A ++F+   +  L 
Sbjct: 261 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 320

Query: 562 PHNSMVIGLA 591
             NSMV GLA
Sbjct: 321 CWNSMVFGLA 330


>dbj|BAJ90212.1| predicted protein [Hordeum vulgare subsp. vulgare]
 dbj|BAJ91391.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 520

 Score =  191 bits (485), Expect = 8e-55
 Identities = 94/179 (52%), Positives = 122/179 (68%)
 Frame = +1

Query: 58  HPPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLH 237
           HP LTLL T+C TM HL Q+H+ + KSGL+ DP+AASR + FCA     D +YA  +  +
Sbjct: 32  HPALTLLHTQCATMAHLRQLHAALVKSGLSKDPIAASRAVAFCAGE-GRDAAYAARIVRY 90

Query: 238 TPNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLFTAYAQLGTAREG 417
            P P SFM+NT +RAL+    P  A++LF  MLRSPT P+R T+PSLF AYA+LG A +G
Sbjct: 91  HPRPNSFMWNTAIRALSDGPGPDAAVALFVDMLRSPTPPERRTFPSLFAAYARLGRADDG 150

Query: 418 AGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
           A  HG+ LK GL  DAY RN+TI+MYA+ G  DEA  LF  C  FD+V  NS ++ L++
Sbjct: 151 AALHGMVLKLGLAGDAYTRNTTIAMYASSGRADEALALFGQCQVFDVVACNSAIVALSR 209


>gb|EEC75797.1| hypothetical protein OsI_12731 [Oryza sativa Indica Group]
          Length = 523

 Score =  190 bits (483), Expect = 2e-54
 Identities = 96/179 (53%), Positives = 121/179 (67%)
 Frame = +1

Query: 58  HPPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLH 237
           HP LTLL T+C +M HL Q+H+ + KSGLA DP+AASR + FCA     D +YA  L  H
Sbjct: 35  HPALTLLHTQCASMAHLRQLHAALVKSGLARDPIAASRAVAFCAGD-GRDAAYAARLVRH 93

Query: 238 TPNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLFTAYAQLGTAREG 417
            P P +FM+NT +RALA    P  A++LF  ML SPT P+R T+PSLF AYA+LG A +G
Sbjct: 94  HPRPNAFMWNTAIRALADGPGPGAAVALFVDMLGSPTPPERRTFPSLFAAYARLGRAGDG 153

Query: 418 AGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
           AG HG+ +K GL  DAYVRNS I+MYA+ G  DEA  L   C+ FD V  NS ++ LA+
Sbjct: 154 AGLHGMVVKLGLGGDAYVRNSVIAMYASRGAADEAIALLARCEAFDAVACNSAIVALAR 212


>ref|XP_015628755.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Oryza sativa Japonica Group]
 gb|ABF97777.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 dbj|BAS85388.1| Os03g0635000 [Oryza sativa Japonica Group]
          Length = 523

 Score =  190 bits (483), Expect = 2e-54
 Identities = 96/179 (53%), Positives = 121/179 (67%)
 Frame = +1

Query: 58  HPPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLH 237
           HP LTLL T+C +M HL Q+H+ + KSGLA DP+AASR + FCA     D +YA  L  H
Sbjct: 35  HPALTLLHTQCASMAHLRQLHAALVKSGLARDPIAASRAVAFCAGD-GRDAAYAARLVRH 93

Query: 238 TPNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLFTAYAQLGTAREG 417
            P P +FM+NT +RALA    P  A++LF  ML SPT P+R T+PSLF AYA+LG A +G
Sbjct: 94  HPRPNAFMWNTAIRALADGPGPGAAVALFVDMLGSPTPPERRTFPSLFAAYARLGRAGDG 153

Query: 418 AGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
           AG HG+ +K GL  DAYVRNS I+MYA+ G  DEA  L   C+ FD V  NS ++ LA+
Sbjct: 154 AGLHGMVVKLGLGGDAYVRNSVIAMYASRGAADEAIALLARCEAFDAVACNSAIVALAR 212


>ref|XP_024180280.1| pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Rosa chinensis]
 gb|PRQ52078.1| putative tetratricopeptide-like helical domain-containing protein
           [Rosa chinensis]
          Length = 542

 Score =  190 bits (483), Expect = 2e-54
 Identities = 97/179 (54%), Positives = 132/179 (73%), Gaps = 1/179 (0%)
 Frame = +1

Query: 61  PPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLHT 240
           P L++LE +CT M  L +IH+ + K+GLAND VAASR+L FCA SP+G+++YA ++F H 
Sbjct: 22  PHLSMLENQCTNMKDLQKIHAHLIKTGLANDTVAASRVLAFCA-SPAGNINYAYMVFRHI 80

Query: 241 PNPTSFMYNTLLRALAKSSVPHRAISLFRRML-RSPTQPQRLTYPSLFTAYAQLGTAREG 417
            NP  F++NT++R  + SS P  AISLF  ML  S  QPQRLTYPS+F AYAQ+G AR+G
Sbjct: 81  QNPNLFIWNTIIRGFSNSSNPEAAISLFIDMLVTSAIQPQRLTYPSVFKAYAQVGLARDG 140

Query: 418 AGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLVPHNSMVIGLAK 594
           A  HG  +K GL+ D ++RN+ I MY+ CG+L EA R+F++  EFD+V  NSMV+GL+K
Sbjct: 141 AQLHGRVVKLGLERDQFIRNTIIRMYSNCGFLSEAKRVFEEELEFDIVAWNSMVMGLSK 199



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 38/133 (28%), Positives = 66/133 (49%)
 Frame = +1

Query: 193 SPSGDLSYAVLLFLHTPNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYP 372
           S  G++S +  LF       S  +N+++    ++ +   A+ LF  M +   +P   T  
Sbjct: 198 SKCGEVSESRRLFDKMLRRNSISWNSMIGGYVRNGMYTEALDLFGEMQKKKIKPSEFTMV 257

Query: 373 SLFTAYAQLGTAREGAGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEF 552
           SL  A AQLG  R+G   H    K+ +  +  V  + I+MY  CG +++A ++F+     
Sbjct: 258 SLLNASAQLGAIRQGEWIHEYIRKNHIQLNPIVVTAIINMYCKCGSIEKAVQVFEAAPRT 317

Query: 553 DLVPHNSMVIGLA 591
            L   NS+++GLA
Sbjct: 318 GLSCWNSIIMGLA 330


>ref|XP_006437177.1| pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Citrus clementina]
 gb|ESR50417.1| hypothetical protein CICLE_v10031197mg [Citrus clementina]
          Length = 534

 Score =  189 bits (481), Expect = 4e-54
 Identities = 98/180 (54%), Positives = 129/180 (71%), Gaps = 2/180 (1%)
 Frame = +1

Query: 61  PPLTLLETKCTTMTHLHQIHSLITKSGLANDPVAASRLLNFCAASPSGDLSYAVLLFLHT 240
           P L+LL+ +CT+M  L +IH+ + K+GL  DP+AASR+L FC  SP+GD++YA L+F   
Sbjct: 21  PLLSLLDKQCTSMKDLKKIHAHLIKTGLPKDPIAASRILAFCT-SPAGDINYAYLVFTQI 79

Query: 241 PNPTSFMYNTLLRALAKSSVPHRAISLFRRML-RSPTQPQRLTYPSLFTAYAQLGTAREG 417
             P  F++NT++R  ++SS P  AI LF  ML  SP QPQRLTYPSLF AYAQLG AR+G
Sbjct: 80  KKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPSLFKAYAQLGLARDG 139

Query: 418 AGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCD-EFDLVPHNSMVIGLAK 594
           A  HG  +K GL+ D ++ N+ I MYA CG+L EA  +FD+ D EFD+V  NSM+IGLAK
Sbjct: 140 AQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLIFDEVDTEFDVVAWNSMIIGLAK 199



 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 36/130 (27%), Positives = 61/130 (46%)
 Frame = +1

Query: 202 GDLSYAVLLFLHTPNPTSFMYNTLLRALAKSSVPHRAISLFRRMLRSPTQPQRLTYPSLF 381
           G++  +  LF    +  +  +N+++    ++     A+ LFR M     +P   T  SL 
Sbjct: 201 GEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLL 260

Query: 382 TAYAQLGTAREGAGAHGLALKSGLDSDAYVRNSTISMYATCGWLDEACRLFDDCDEFDLV 561
            A A+LG  R+G   H   + +  + +  V  + I MY  CG  + A ++F+   +  L 
Sbjct: 261 NACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLS 320

Query: 562 PHNSMVIGLA 591
             NSMV GLA
Sbjct: 321 CWNSMVFGLA 330