BLASTX nr result

ID: Ophiopogon22_contig00013003 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00013003
         (553 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK58269.1| uncharacterized protein A4U43_C09F10400 [Asparagu...    64   2e-08
ref|XP_020245244.1| uncharacterized protein LOC109823380 [Aspara...    64   2e-08
ref|XP_020252861.1| extensin-like isoform X2 [Asparagus officina...    61   2e-07
ref|XP_020252859.1| extensin-like isoform X1 [Asparagus officina...    61   2e-07
gb|ONK77228.1| uncharacterized protein A4U43_C02F4400 [Asparagus...    61   2e-07

>gb|ONK58269.1| uncharacterized protein A4U43_C09F10400 [Asparagus officinalis]
          Length = 350

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/86 (44%), Positives = 48/86 (55%)
 Frame = +3

Query: 3   SRHQASSHLPPPDDPYRSRRHLTSPHLPSSQDPYTDGAYALSDS*NISTHAPLTGNYLYH 182
           S HQASSHLP    PY++  HL   HLP S+DPY  G    +DS  I+ HAP T + +Y+
Sbjct: 204 SLHQASSHLP----PYQASSHLAPAHLPPSEDPYL-GRVPAADSHFITAHAPQTSSSVYY 258

Query: 183 PVIHYPRAQLSLVNLPIHSTLPILAI 260
           P  HY  A  S+   P  +  P  AI
Sbjct: 259 PATHYTLAPQSVAQ-PTDAYYPPSAI 283


>ref|XP_020245244.1| uncharacterized protein LOC109823380 [Asparagus officinalis]
          Length = 497

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/86 (44%), Positives = 48/86 (55%)
 Frame = +3

Query: 3   SRHQASSHLPPPDDPYRSRRHLTSPHLPSSQDPYTDGAYALSDS*NISTHAPLTGNYLYH 182
           S HQASSHLP    PY++  HL   HLP S+DPY  G    +DS  I+ HAP T + +Y+
Sbjct: 351 SLHQASSHLP----PYQASSHLAPAHLPPSEDPYL-GRVPAADSHFITAHAPQTSSSVYY 405

Query: 183 PVIHYPRAQLSLVNLPIHSTLPILAI 260
           P  HY  A  S+   P  +  P  AI
Sbjct: 406 PATHYTLAPQSVAQ-PTDAYYPPSAI 430


>ref|XP_020252861.1| extensin-like isoform X2 [Asparagus officinalis]
          Length = 499

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/62 (58%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
 Frame = +3

Query: 3   SRHQASSHLPPPDDP--YRSRRHLTSPHLPSSQDPYTDGAYALSDS*NISTHAPLTGNYL 176
           S HQA  HLPP DD   Y SRRHL S HLP   DPY   A A SDS  ISTH P T N L
Sbjct: 273 STHQAPFHLPPSDDDDQYLSRRHLAS-HLPPYADPYIGRAPAASDSNYISTHIPTTENDL 331

Query: 177 YH 182
           ++
Sbjct: 332 HY 333


>ref|XP_020252859.1| extensin-like isoform X1 [Asparagus officinalis]
          Length = 537

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/62 (58%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
 Frame = +3

Query: 3   SRHQASSHLPPPDDP--YRSRRHLTSPHLPSSQDPYTDGAYALSDS*NISTHAPLTGNYL 176
           S HQA  HLPP DD   Y SRRHL S HLP   DPY   A A SDS  ISTH P T N L
Sbjct: 311 STHQAPFHLPPSDDDDQYLSRRHLAS-HLPPYADPYIGRAPAASDSNYISTHIPTTENDL 369

Query: 177 YH 182
           ++
Sbjct: 370 HY 371


>gb|ONK77228.1| uncharacterized protein A4U43_C02F4400 [Asparagus officinalis]
          Length = 549

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/62 (58%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
 Frame = +3

Query: 3   SRHQASSHLPPPDDP--YRSRRHLTSPHLPSSQDPYTDGAYALSDS*NISTHAPLTGNYL 176
           S HQA  HLPP DD   Y SRRHL S HLP   DPY   A A SDS  ISTH P T N L
Sbjct: 323 STHQAPFHLPPSDDDDQYLSRRHLAS-HLPPYADPYIGRAPAASDSNYISTHIPTTENDL 381

Query: 177 YH 182
           ++
Sbjct: 382 HY 383


Top