BLASTX nr result

ID: Ophiopogon22_contig00011864 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00011864
         (458 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_024007588.1| LOW QUALITY PROTEIN: uncharacterized protein...    58   5e-07

>ref|XP_024007588.1| LOW QUALITY PROTEIN: uncharacterized protein At2g29880 [Eutrema
           salsugineum]
          Length = 303

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 21/147 (14%)
 Frame = +1

Query: 1   RFKSYKRDFQSVARLLRC-NGFHWNPEQKVVTASDANWK---RQRPLAEYKRKQV--PFR 162
           R KS K+++QS A LLRC +GF W+P  K  TASD  W+   +  P  EY R      F 
Sbjct: 74  RMKSLKKEYQSYAELLRCSSGFGWDPILKQFTASDEVWEEYFKGHPNHEYMRSNTFEDFE 133

Query: 163 DLEMIFASP---------------TTSDEVDTETHEREDFNIDKEKELAHDTQHGLPLKR 297
           DL++IF S                  + EV+ +  ERED +++   E A++T +  P ++
Sbjct: 134 DLQIIFESAIAKGNNVFGLGGDSNAATFEVENDVQEREDVHMENVCE-ANETSYETPKEK 192

Query: 298 KRRPKAIFQNVNS*NQKTIDEMMSKFL 378
               K +  + N       D+   K +
Sbjct: 193 LPSRKRVKTHGNPSESINHDDRSEKVI 219


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