BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00011605
         (1311 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposo...   514   e-170
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   470   e-153
gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposo...   443   e-149
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   473   e-148
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   473   e-147
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711...   459   e-146
gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposo...   454   e-143
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     446   e-142
gb|ASR75372.1| retrotransposon protein [Oryza nivara]                 442   e-141
gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposo...   423   e-141
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     442   e-140
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   454   e-140
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]        422   e-140
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...   440   e-139
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]                        439   e-139
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     436   e-138
ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024...   446   e-138
gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinen...   414   e-138
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   437   e-138
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   437   e-138

>gb|KYP47640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1032

 Score =  514 bits (1324), Expect = e-170
 Identities = 256/364 (70%), Positives = 298/364 (81%), Gaps = 1/364 (0%)
 Frame = -2

Query: 1091 PKRYDDVLVAFALPAEVIEDSIPLTYREAELSSESSRWREAMVEEMESLHKNNTWELAKL 912
            P RY D +V++A P  V  D IP TY EA   SE  +WR AM EEMESL +N TW+LA L
Sbjct: 560  PARYVD-MVSYASP--VASDDIPTTYIEAVKGSEEDKWRSAMSEEMESLRRNQTWKLANL 616

Query: 911  PKGKKAIGCKWVYAKKEGSLNEG-VRFKARLVAKGYAQVEGVDYNEVFSPVVKHSSIRIL 735
            PKGKKAIGCKWVYAKK+G  ++  VR+KARLVAKGYAQ EG+DYNEVFSPVVKHSSIR+L
Sbjct: 617  PKGKKAIGCKWVYAKKDGFSDKSEVRYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRVL 676

Query: 734  LALVAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEELVCKLKKSLYGLKQSP 555
            LALVAQ D++LVQ+DVKTAFLHGDL+EEIYMTQP GFK AGKE + CKL+KSLYGLKQSP
Sbjct: 677  LALVAQLDMELVQMDVKTAFLHGDLEEEIYMTQPEGFKVAGKENMFCKLEKSLYGLKQSP 736

Query: 554  RQWYKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDDMLIASKNSVAIAKLKG 375
            RQWYKRFD FM+ + YTRS YD CVYL KL  G +IYLLLYVDDMLIASKN   I KLK 
Sbjct: 737  RQWYKRFDKFMLRQKYTRSKYDHCVYLRKLHDGSFIYLLLYVDDMLIASKNKEEIEKLKT 796

Query: 374  QLSNEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQKFNYDSDAKAVNTPLA 195
            QL+ EFEMKDLGEA+KILGMEI RDRK  R+CLTQK YL+++L++F    ++K V+TPLA
Sbjct: 797  QLNGEFEMKDLGEAKKILGMEISRDRKLGRLCLTQKEYLKRVLKRFGISDESKPVSTPLA 856

Query: 194  PHFKLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLSQAVSMVSRYMHDPVRG 15
             HFKLSA +SP+   ++ YMS VPYA+AVGSLMYAMVCTRPD+S AV +VSRYMH+P + 
Sbjct: 857  SHFKLSANLSPRDAAEKAYMSKVPYASAVGSLMYAMVCTRPDISYAVGVVSRYMHNPGKE 916

Query: 14   HWEA 3
            HW+A
Sbjct: 917  HWQA 920


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1032

 Score =  470 bits (1210), Expect = e-153
 Identities = 235/370 (63%), Positives = 291/370 (78%), Gaps = 4/370 (1%)
 Frame = -2

Query: 1100 IKKPKRY-DDVLVAFALPA--EVIEDSIPLTYREAELSSESSRWREAMVEEMESLHKNNT 930
            IK P RY DD L A+AL    EV +D  P +Y EA    +S++W  AM EE+ESLHKNNT
Sbjct: 483  IKLPARYTDDNLTAYALSIAQEVNDDVEPASYSEAVSCVDSAKWLVAMNEEIESLHKNNT 542

Query: 929  WELAKLPKGKKAIGCKWVYAKKEGSLN-EGVRFKARLVAKGYAQVEGVDYNEVFSPVVKH 753
            W L KLPKGK+ + CKW+Y KK+G    E  R KARLV KG+ Q EG+D+NE+FSPVV+H
Sbjct: 543  WNLTKLPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEGIDFNEIFSPVVRH 602

Query: 752  SSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEELVCKLKKSLY 573
            +SIRILLA VA +DL+L QLDVKTAFLHG+L+EEIYM QP GF    KE LVC+LKKSLY
Sbjct: 603  TSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPSKEHLVCQLKKSLY 662

Query: 572  GLKQSPRQWYKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDDMLIASKNSVA 393
            GLKQ+PRQWYK+FDSFM+G+GY+RS YD C+Y  + P G +IYLLLYVDDMLIAS++   
Sbjct: 663  GLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLYVDDMLIASRDKSL 722

Query: 392  IAKLKGQLSNEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQKFNYDSDAKA 213
            I+KLK QL+NEFEMK+LG A+KILGMEI RDR+  ++ L+Q+ Y+ ++L +FN  ++ K 
Sbjct: 723  ISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIERLLDRFNM-NNCKP 781

Query: 212  VNTPLAPHFKLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLSQAVSMVSRYM 33
            V+TPLA HFKLS+ + P+T E+ E MSHVPYA+AVGSLMYAMVCTRPDL+ AVSMVSRYM
Sbjct: 782  VSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYAMVCTRPDLAYAVSMVSRYM 841

Query: 32   HDPVRGHWEA 3
            H+P + HW A
Sbjct: 842  HNPGKDHWSA 851


>gb|KYP53356.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 503

 Score =  443 bits (1140), Expect = e-149
 Identities = 214/323 (66%), Positives = 264/323 (81%), Gaps = 1/323 (0%)
 Frame = -2

Query: 968 MVEEMESLHKNNTWELAKLPKGKKAIGCKWVYAKKEGSLN-EGVRFKARLVAKGYAQVEG 792
           M EE+ESLHKNNTW L KLPKGK+ + CKW+Y KK+G    E  R KARLV KG+ Q EG
Sbjct: 1   MNEEIESLHKNNTWNLTKLPKGKRPLRCKWIYKKKDGIPGVEDPRCKARLVVKGFYQKEG 60

Query: 791 VDYNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAG 612
           +D+NE+FSPVV+H+SIRILLA VA +DL+L QLDVKTAFLHG+L+EEIYM QP GF    
Sbjct: 61  IDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQPEGFVVPS 120

Query: 611 KEELVCKLKKSLYGLKQSPRQWYKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLY 432
           KE LVC+LKKSLYGLKQ+PRQWYK+FDSFM+G+GY+RS YD C+Y  + P G +IYLLLY
Sbjct: 121 KEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGTFIYLLLY 180

Query: 431 VDDMLIASKNSVAIAKLKGQLSNEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRK 252
           VDDMLIAS++   I+KLK QL+NEFEMK+LG A+KILGMEI RDR+  ++ L+Q+ Y+ +
Sbjct: 181 VDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLSQQKYIER 240

Query: 251 MLQKFNYDSDAKAVNTPLAPHFKLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRP 72
           +L +FN  ++ K V+TPLA HFKLS+ + P+T E+ E MSHVPYA+AVGSLMYAMVCTRP
Sbjct: 241 LLDRFNM-NNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYAMVCTRP 299

Query: 71  DLSQAVSMVSRYMHDPVRGHWEA 3
           DL+ AVSMVSRYMH+P + HW A
Sbjct: 300 DLAYAVSMVSRYMHNPGKDHWSA 322


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  473 bits (1217), Expect = e-148
 Identities = 240/367 (65%), Positives = 286/367 (77%), Gaps = 1/367 (0%)
 Frame = -2

Query: 1100 IKKPKRYDDVLVAFALPAEVIEDSIPLTYREAELSSESSRWREAMVEEMESLHKNNTWEL 921
            IK   RY + LV+FAL         P +Y EA    ES++W  AM EE+ESLHKN+TWEL
Sbjct: 1298 IKPNPRYAN-LVSFALSVAESIGIEPSSYNEAVTCDESAQWAIAMSEEIESLHKNHTWEL 1356

Query: 920  AKLPKGKKAIGCKWVYAKKEGSLN-EGVRFKARLVAKGYAQVEGVDYNEVFSPVVKHSSI 744
             K P  +K +GCKWV+ KKEG L  E  RFKARLVAKG+ Q EG+DYNEVFSPVVKHSSI
Sbjct: 1357 VKPPSNQKIVGCKWVFKKKEGILGVEATRFKARLVAKGFTQKEGIDYNEVFSPVVKHSSI 1416

Query: 743  RILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEELVCKLKKSLYGLK 564
            R+LLA+VA+ DL+L QLDVKTAFLHG+L+E IYM QP GF   GKE+ VC LKKSLYGLK
Sbjct: 1417 RVLLAMVAKSDLELEQLDVKTAFLHGELEETIYMRQPEGFTVPGKEDHVCLLKKSLYGLK 1476

Query: 563  QSPRQWYKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDDMLIASKNSVAIAK 384
            QSPRQWYKRFDSFM+  GYTR  YD CVY  KL  G +IYLLLYVDDMLIASKN   I K
Sbjct: 1477 QSPRQWYKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIYLLLYVDDMLIASKNMSEINK 1536

Query: 383  LKGQLSNEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQKFNYDSDAKAVNT 204
            LK QLS EFEMKDLG A+KILGM+I RDRK  ++ ++QK Y+ K+LQ+F  D  AK V+T
Sbjct: 1537 LKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQKNYIEKVLQRFGMDK-AKTVST 1595

Query: 203  PLAPHFKLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLSQAVSMVSRYMHDP 24
            PLAPHFKLSA++SP++ E+++ MSH+PY++AVGS+MYAMVCTRPD+S AVS+VSRYM  P
Sbjct: 1596 PLAPHFKLSAELSPQSDEEKQQMSHIPYSSAVGSVMYAMVCTRPDISHAVSVVSRYMSCP 1655

Query: 23   VRGHWEA 3
             + HW+A
Sbjct: 1656 GKEHWQA 1662


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  473 bits (1217), Expect = e-147
 Identities = 240/367 (65%), Positives = 286/367 (77%), Gaps = 1/367 (0%)
 Frame = -2

Query: 1100 IKKPKRYDDVLVAFALPAEVIEDSIPLTYREAELSSESSRWREAMVEEMESLHKNNTWEL 921
            IK   RY + LV+FAL         P +Y EA    ES++W  AM EE+ESLHKN+TWEL
Sbjct: 1277 IKPNPRYAN-LVSFALSVAESIGIEPSSYNEAVTCDESAQWAIAMSEEIESLHKNHTWEL 1335

Query: 920  AKLPKGKKAIGCKWVYAKKEGSLN-EGVRFKARLVAKGYAQVEGVDYNEVFSPVVKHSSI 744
             K P  +K +GCKWV+ KKEG L  E  RFKARLVAKG+ Q EG+DYNEVFSPVVKHSSI
Sbjct: 1336 VKPPSNQKIVGCKWVFKKKEGILGVEATRFKARLVAKGFTQKEGIDYNEVFSPVVKHSSI 1395

Query: 743  RILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEELVCKLKKSLYGLK 564
            R+LLA+VA+ DL+L QLDVKTAFLHG+L+E IYM QP GF   GKE+ VC LKKSLYGLK
Sbjct: 1396 RVLLAMVAKSDLELEQLDVKTAFLHGELEETIYMRQPEGFTVPGKEDHVCLLKKSLYGLK 1455

Query: 563  QSPRQWYKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDDMLIASKNSVAIAK 384
            QSPRQWYKRFDSFM+  GYTR  YD CVY  KL  G +IYLLLYVDDMLIASKN   I K
Sbjct: 1456 QSPRQWYKRFDSFMIQHGYTRCDYDACVYHRKLSDGSHIYLLLYVDDMLIASKNMSEINK 1515

Query: 383  LKGQLSNEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQKFNYDSDAKAVNT 204
            LK QLS EFEMKDLG A+KILGM+I RDRK  ++ ++QK Y+ K+LQ+F  D  AK V+T
Sbjct: 1516 LKSQLSGEFEMKDLGAAKKILGMDIHRDRKAGKLRVSQKNYIEKVLQRFGMDK-AKTVST 1574

Query: 203  PLAPHFKLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLSQAVSMVSRYMHDP 24
            PLAPHFKLSA++SP++ E+++ MSH+PY++AVGS+MYAMVCTRPD+S AVS+VSRYM  P
Sbjct: 1575 PLAPHFKLSAELSPQSDEEKQQMSHIPYSSAVGSVMYAMVCTRPDISHAVSVVSRYMSCP 1634

Query: 23   VRGHWEA 3
             + HW+A
Sbjct: 1635 GKEHWQA 1641


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
 gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  459 bits (1181), Expect = e-146
 Identities = 233/369 (63%), Positives = 292/369 (79%), Gaps = 3/369 (0%)
 Frame = -2

Query: 1100 IKKPKRYD-DVLVAFALP-AEVIEDSIPLTYREAELSSESSRWREAMVEEMESLHKNNTW 927
            ++ P RY  + +V +AL  AE ++ S P TY+EA LSS+S +W  AM +EMESLHKN TW
Sbjct: 764  VRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSDSEKWFAAMGDEMESLHKNQTW 823

Query: 926  ELAKLPKGKKAIGCKWVYAKKEG-SLNEGVRFKARLVAKGYAQVEGVDYNEVFSPVVKHS 750
            +L   P G+K I CKWV+ KKEG S  EGV++KAR+VA+G+ Q EGVDYNE+FSPVV+H+
Sbjct: 824  DLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHT 883

Query: 749  SIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEELVCKLKKSLYG 570
            SIR+LLA+VA  +L+L QLDVKTAFLHG+L+EEIYMTQP GF+  GKE  VCKLKKSLYG
Sbjct: 884  SIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYG 943

Query: 569  LKQSPRQWYKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDDMLIASKNSVAI 390
            LKQSPRQWYKRFDS+MV  GYTRSSYD CVY ++L    +IYL+LYVDDMLIA+K    I
Sbjct: 944  LKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDI 1003

Query: 389  AKLKGQLSNEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQKFNYDSDAKAV 210
             KLKG LS EFEMKDLG ARKILGMEI RDR+R ++ L+Q+ Y++K+L +F   S +K +
Sbjct: 1004 QKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGM-SSSKPI 1062

Query: 209  NTPLAPHFKLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLSQAVSMVSRYMH 30
            +TP A +  L+A  +P++ E++EYMS VPYA+AVGSLMYAMVCTRPDL+ AVS+VSR+M 
Sbjct: 1063 DTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPDLAHAVSVVSRFMG 1122

Query: 29   DPVRGHWEA 3
             P R HW+A
Sbjct: 1123 QPGREHWQA 1131


>gb|PHT40240.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Capsicum
            baccatum]
          Length = 1526

 Score =  454 bits (1168), Expect = e-143
 Identities = 223/359 (62%), Positives = 277/359 (77%), Gaps = 1/359 (0%)
 Frame = -2

Query: 1076 DVLVAFALPAEVIEDSIPLTYREAELSSESSRWREAMVEEMESLHKNNTWELAKLPKGKK 897
            ++  A  +  E+ ED  P  Y EA    +S++W  AM EE+ESL KN TW+L  LP+GK+
Sbjct: 454  NIAYALTVAQEMGEDGEPKNYSEAISGDDSAKWTAAMQEEVESLLKNETWDLVMLPEGKR 513

Query: 896  AIGCKWVYAKKEGSLN-EGVRFKARLVAKGYAQVEGVDYNEVFSPVVKHSSIRILLALVA 720
             I CKW++ +KEG    E  R+KAR V +G+ Q EG+D+NEVFSPVV+HSSIR+LLALVA
Sbjct: 514  VISCKWIFKRKEGIPGVENARYKARFVVRGFDQQEGIDFNEVFSPVVRHSSIRVLLALVA 573

Query: 719  QYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEELVCKLKKSLYGLKQSPRQWYK 540
             YDL+L QLDVKTAFLHG+L+EEIY+ QP GF   GKE  VC+LKKSLYGLKQSPRQWYK
Sbjct: 574  LYDLELEQLDVKTAFLHGNLEEEIYIQQPEGFVVPGKENHVCRLKKSLYGLKQSPRQWYK 633

Query: 539  RFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDDMLIASKNSVAIAKLKGQLSNE 360
            RFDSFM G GY+RSSYD CVY  KL  G  +YLLLYVDDMLIA+++   + KLK QL++E
Sbjct: 634  RFDSFMTGHGYSRSSYDNCVYFQKLSDGSLVYLLLYVDDMLIAARDKTLVDKLKVQLNSE 693

Query: 359  FEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQKFNYDSDAKAVNTPLAPHFKL 180
            F+MKDLG A+KILGMEI RDR+  ++ L+QK Y+ KML +F    D KAVNTPLA HFKL
Sbjct: 694  FDMKDLGPAKKILGMEINRDRQAGKLFLSQKKYVMKMLDRFGM-RDCKAVNTPLAAHFKL 752

Query: 179  SAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLSQAVSMVSRYMHDPVRGHWEA 3
            S+   P++ E++  MSHVPY+NAVGSLMYAMVCTRPDL+ AVS+VSR+MH+P + HWE+
Sbjct: 753  SSDQCPQSEEEQRRMSHVPYSNAVGSLMYAMVCTRPDLAYAVSVVSRFMHNPGKQHWES 811


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  446 bits (1147), Expect = e-142
 Identities = 231/371 (62%), Positives = 291/371 (78%), Gaps = 5/371 (1%)
 Frame = -2

Query: 1100 IKKPKRY--DDVLVAFALP-AEVIEDSI-PLTYREAELSSESSRWREAMVEEMESLHKNN 933
            IK P+RY  +  +VA+AL  AE IE +  P TY EA +S + +RW  AM +EMESL KN+
Sbjct: 759  IKPPRRYIEEAKIVAYALSVAEKIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNH 818

Query: 932  TWELAKLPKGKKAIGCKWVYAKKEG-SLNEGVRFKARLVAKGYAQVEGVDYNEVFSPVVK 756
            TWEL KLPK KK I CKW++ +KEG S ++  R+KARLVAKGY+Q+ G+D+N+VFSPVVK
Sbjct: 819  TWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVK 878

Query: 755  HSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEELVCKLKKSL 576
            HSSIR LL +VA +D +L Q++VKTAFLHG+L+E+IYM QP GF   GKE LVC+LKKSL
Sbjct: 879  HSSIRTLLGIVAMHDYELEQMNVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSL 938

Query: 575  YGLKQSPRQWYKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDDMLIASKNSV 396
            YGLKQSPRQWYKRFDSFM+ + +  S+YD CVYL K+  G  IYLLLYVDDMLIA+K+  
Sbjct: 939  YGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVYL-KVVDGSVIYLLLYVDDMLIAAKDKS 997

Query: 395  AIAKLKGQLSNEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQKFNYDSDAK 216
             I KLK QLS+EFEMKDLG A+KILGMEI R+R   ++ L+QKGY+ K+L++FN   DAK
Sbjct: 998  EIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNM-HDAK 1056

Query: 215  AVNTPLAPHFKLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLSQAVSMVSRY 36
             V+TPLA HF+LS+ + P +  D EYMS VPY++AVGSLMYAMVC RPDLS A+S+V+RY
Sbjct: 1057 PVSTPLAAHFRLSSDLCPLSDYDIEYMSRVPYSSAVGSLMYAMVCCRPDLSHALSVVNRY 1116

Query: 35   MHDPVRGHWEA 3
            M +P + HW+A
Sbjct: 1117 MANPGKEHWKA 1127


>gb|ASR75372.1| retrotransposon protein [Oryza nivara]
          Length = 1170

 Score =  442 bits (1136), Expect = e-141
 Identities = 225/361 (62%), Positives = 275/361 (76%), Gaps = 2/361 (0%)
 Frame = -2

Query: 1079 DDVLVAFALPAEVIEDSIPLTYREAELSSESSRWREAMVEEMESLHKNNTWELAKLPKGK 900
            D V  AF+   +V     P TY EA +S +  +W  AM EEM+SL KN TWEL  LPK K
Sbjct: 707  DMVYYAFSCAEQVENTLEPATYTEAVVSGDREKWISAMQEEMQSLEKNGTWELVHLPKQK 766

Query: 899  KAIGCKWVYAKKEG--SLNEGVRFKARLVAKGYAQVEGVDYNEVFSPVVKHSSIRILLAL 726
            K + CKW++ +K G  S +E  RFKARLVAKG++Q+ GVDYN+VFSPVVKHSSIR   ++
Sbjct: 767  KPVRCKWIFKEKGGFISPSEPPRFKARLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSI 826

Query: 725  VAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEELVCKLKKSLYGLKQSPRQW 546
            VA +DL+L QLDVKTAFLHG+L+EEIYM QP GF   GKE+ VCKLK+SLYGLKQSPRQW
Sbjct: 827  VAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQW 886

Query: 545  YKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDDMLIASKNSVAIAKLKGQLS 366
            YKRFDSFM+  G+ RS +D CVY+ K  +G  IYLLLYVDDMLIA+K+   I  LK QLS
Sbjct: 887  YKRFDSFMLSHGFKRSEFDSCVYI-KFVNGSPIYLLLYVDDMLIAAKSKEQITTLKKQLS 945

Query: 365  NEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQKFNYDSDAKAVNTPLAPHF 186
            +EF+MKDLG A+KILGMEI RDR    + L+Q+ Y++K+LQ+FN   DAK V+TP+APHF
Sbjct: 946  SEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNM-HDAKPVSTPIAPHF 1004

Query: 185  KLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLSQAVSMVSRYMHDPVRGHWE 6
            KLSA     T ED EYMS VPY++AVGSLMYAMVC+RPDLS A+S+VSRYM +P + HW+
Sbjct: 1005 KLSALQCASTDEDVEYMSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMANPGKEHWK 1064

Query: 5    A 3
            A
Sbjct: 1065 A 1065


>gb|KYP57305.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 530

 Score =  423 bits (1087), Expect = e-141
 Identities = 218/372 (58%), Positives = 274/372 (73%), Gaps = 9/372 (2%)
 Frame = -2

Query: 1100 IKKPKRYDDVL-------VAFAL-PAEVIEDSIPLTYREAELSSESSRWREAMVEEMESL 945
            I+KP RY DV        VA+AL   E ++   P +Y+EA  S E+S+W  AM EEM+SL
Sbjct: 160  IRKPTRYADVTNVVDTNSVAYALLVGENLDSDEPKSYKEAIQSKEASKWLIAMDEEMQSL 219

Query: 944  HKNNTWELAKLPKGKKAIGCKWVYAKKEGSLN-EGVRFKARLVAKGYAQVEGVDYNEVFS 768
             KN TWEL  LP+G K +GCKWV  +KEG    E  RFKARLVAKG++Q EG+DY+EVFS
Sbjct: 220  KKNQTWELVPLPRGVKPVGCKWVLKRKEGIPGVEPSRFKARLVAKGFSQKEGIDYHEVFS 279

Query: 767  PVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEELVCKL 588
            PVVKH +IR+LLA+V+  D+ L QL+VK AFLHG+L+E++YM+QP GF   GK+  VC L
Sbjct: 280  PVVKHKTIRVLLAMVSALDMKLEQLNVKIAFLHGNLEEQVYMSQPDGFLEVGKKNHVCLL 339

Query: 587  KKSLYGLKQSPRQWYKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDDMLIAS 408
            KKSLYGLKQSPRQWYKRFD+FM+   + R+ +D CVY  KL  G YIYLLLYVDDMLIA+
Sbjct: 340  KKSLYGLKQSPRQWYKRFDAFMISYNFVRNEFDNCVYSRKLSDGSYIYLLLYVDDMLIAA 399

Query: 407  KNSVAIAKLKGQLSNEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQKFNYD 228
            K+   I  LK  LS+EFEMKDLG A+KILGMEI RDR    + ++QK Y+ K+LQ F  +
Sbjct: 400  KSKTDIDALKAMLSSEFEMKDLGTAKKILGMEIWRDRNAGLLYVSQKKYIEKLLQSFQME 459

Query: 227  SDAKAVNTPLAPHFKLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLSQAVSM 48
             ++K V+TPLA HFKL A   P T E++EYM+ VPY++AVGSLMY MVCTRPDL+ AVS+
Sbjct: 460  -NSKPVSTPLATHFKLDASTLPSTNEEKEYMNTVPYSSAVGSLMYVMVCTRPDLAYAVSV 518

Query: 47   VSRYMHDPVRGH 12
            VS +M +P + H
Sbjct: 519  VSTFMSNPGKAH 530


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  442 bits (1136), Expect = e-140
 Identities = 229/370 (61%), Positives = 291/370 (78%), Gaps = 5/370 (1%)
 Frame = -2

Query: 1097 KKPKRYDDV--LVAFALP-AEVIEDSI-PLTYREAELSSESSRWREAMVEEMESLHKNNT 930
            K P+RY +   +VA+AL  AE IE +  P TY +A +S + +RW  AM +EMESL KN++
Sbjct: 697  KPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHDEMESLEKNHS 756

Query: 929  WELAKLPKGKKAIGCKWVYAKKEG-SLNEGVRFKARLVAKGYAQVEGVDYNEVFSPVVKH 753
            WEL KLPK KK I CKW++ +KEG S ++  R+KARLVAKGY+Q+ G+D+N+VFSPVVKH
Sbjct: 757  WELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKH 816

Query: 752  SSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEELVCKLKKSLY 573
            SSIR LL++VA +D +L Q+DVKTAFLHG+L+E+IYM QP GF   GKE LVC+LKKSLY
Sbjct: 817  SSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLY 876

Query: 572  GLKQSPRQWYKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDDMLIASKNSVA 393
            GLKQSPRQWYKRFDSFM+ + + RS+YD CVYL K+  G  IYLLLYVDDMLIA+K+   
Sbjct: 877  GLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKSE 935

Query: 392  IAKLKGQLSNEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQKFNYDSDAKA 213
            IAKLK QLS+EFEMKDLG A+KILGMEI R+R   ++ L+QK Y+ K+L +FN   DAK 
Sbjct: 936  IAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKCYIEKVLHRFNM-HDAKL 994

Query: 212  VNTPLAPHFKLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLSQAVSMVSRYM 33
            V+T LA HF+LS+ + P++  D EYMS VPY++AV SLMYAMVC+RPDLS A+S+VSRYM
Sbjct: 995  VSTLLAAHFRLSSDLCPQSAYDIEYMSRVPYSSAVSSLMYAMVCSRPDLSHALSVVSRYM 1054

Query: 32   HDPVRGHWEA 3
             +P + HW+A
Sbjct: 1055 ANPGKEHWKA 1064


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  454 bits (1167), Expect = e-140
 Identities = 234/371 (63%), Positives = 295/371 (79%), Gaps = 5/371 (1%)
 Frame = -2

Query: 1100 IKKPKRYDDV--LVAFALP-AEVIEDSI-PLTYREAELSSESSRWREAMVEEMESLHKNN 933
            IK P+RY +   +VA+AL  AE IE +  P TY EA +S + +RW  AM +EMESL KN+
Sbjct: 994  IKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNH 1053

Query: 932  TWELAKLPKGKKAIGCKWVYAKKEG-SLNEGVRFKARLVAKGYAQVEGVDYNEVFSPVVK 756
            TWEL KLPK KK I CKW++ +KEG S ++  R+KARL+AKGY+Q+ G+D+N+VFSPVVK
Sbjct: 1054 TWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKARLIAKGYSQIPGIDFNDVFSPVVK 1113

Query: 755  HSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEELVCKLKKSL 576
            HSSIR LL++VA +D +L Q+DVKTAFLHG+L+E+IYM QP GF   GKE LVC+LKKSL
Sbjct: 1114 HSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSL 1173

Query: 575  YGLKQSPRQWYKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDDMLIASKNSV 396
            YGLKQSPRQWYKRFDSFM+ + + RS+YD CVYL K+  G  IYLLLYVDDMLIA+K+  
Sbjct: 1174 YGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYL-KVVDGSAIYLLLYVDDMLIAAKDKS 1232

Query: 395  AIAKLKGQLSNEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQKFNYDSDAK 216
             IAKLK QLS+EFEMKDLG A+KILGMEI R R   ++ L+QKGY+ K+L++FN   DAK
Sbjct: 1233 EIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNM-HDAK 1291

Query: 215  AVNTPLAPHFKLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLSQAVSMVSRY 36
             V+TPLA HF+LS+ + P++  D EYMS VPY++AVGSLMYAMVC+RPDLS A+S+VSRY
Sbjct: 1292 PVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSAVGSLMYAMVCSRPDLSHALSVVSRY 1351

Query: 35   MHDPVRGHWEA 3
            M +P + HW+A
Sbjct: 1352 MANPGKEHWKA 1362


>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
          Length = 576

 Score =  422 bits (1085), Expect = e-140
 Identities = 216/360 (60%), Positives = 268/360 (74%), Gaps = 1/360 (0%)
 Frame = -2

Query: 1079 DDVLVAFALPAEVIEDSIPLTYREAELSSESSRWREAMVEEMESLHKNNTWELAKLPKGK 900
            D V  AF+   +V     P TY EA +S +   W  AM EEM+SL KN TW+L  LPK K
Sbjct: 121  DMVYYAFSCVEQVENTLEPATYTEAVVSGDRENWISAMQEEMQSLEKNGTWKLVHLPKQK 180

Query: 899  KAIGCKWVYAKKEG-SLNEGVRFKARLVAKGYAQVEGVDYNEVFSPVVKHSSIRILLALV 723
            K + CKW++ +KEG S +E  RFKARLVAKG++Q+ GVDYN+VFSPVVKHSSIR   ++V
Sbjct: 181  KPVHCKWIFKRKEGLSPSEPPRFKARLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIV 240

Query: 722  AQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEELVCKLKKSLYGLKQSPRQWY 543
            A  DL+L QLDVKT FLHG+L++EIYM QP GF   GKE+ VCKLK+SLYGLKQSPRQWY
Sbjct: 241  AMDDLELKQLDVKTTFLHGELEDEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWY 300

Query: 542  KRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDDMLIASKNSVAIAKLKGQLSN 363
            KRFDSFM+  G+  S +D CVY+ K  +G  IYLLLYVDDMLIA+K+   I  LK QLS+
Sbjct: 301  KRFDSFMLSHGFKWSEFDSCVYI-KFVNGSPIYLLLYVDDMLIAAKSKEQITTLKKQLSS 359

Query: 362  EFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQKFNYDSDAKAVNTPLAPHFK 183
            EF+MKDLG A+KILGMEI RD     + L+Q+ Y++K+L+ FN   DAK ++TP+A HFK
Sbjct: 360  EFDMKDLGAAKKILGMEITRDINFGLLFLSQQSYIKKVLEHFNM-HDAKPISTPIAAHFK 418

Query: 182  LSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLSQAVSMVSRYMHDPVRGHWEA 3
            LSA     T ED  YMS VPY++AVGSLMYAM+C+RPDLS A+S+VSRYM +P + HW+A
Sbjct: 419  LSALQCASTDEDVGYMSRVPYSSAVGSLMYAMICSRPDLSHAMSLVSRYMANPGKEHWKA 478


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1278

 Score =  440 bits (1132), Expect = e-139
 Identities = 224/360 (62%), Positives = 275/360 (76%), Gaps = 1/360 (0%)
 Frame = -2

Query: 1079 DDVLVAFALPAEVIEDSIPLTYREAELSSESSRWREAMVEEMESLHKNNTWELAKLPKGK 900
            D V  AF+   +V     P TY EA +S +  +W  AM EEM+SL KN TWEL  LPK K
Sbjct: 788  DMVYYAFSCAEQVENTLEPATYTEAVVSGDREKWISAMQEEMQSLEKNGTWELVHLPKQK 847

Query: 899  KAIGCKWVYAKKEG-SLNEGVRFKARLVAKGYAQVEGVDYNEVFSPVVKHSSIRILLALV 723
            K + CKW++ +KEG S +E  RFKARLVAKG++Q+ GVDYN+VFSPVVKHSSIR   ++V
Sbjct: 848  KPVRCKWIFKRKEGLSPSEPPRFKARLVAKGFSQIVGVDYNDVFSPVVKHSSIRTFFSIV 907

Query: 722  AQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEELVCKLKKSLYGLKQSPRQWY 543
            A +DL+L QLDVKTAFLHG+L+EEIYM QP GF   GKE+ VCKLK+SLYGLKQSPRQWY
Sbjct: 908  AMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWY 967

Query: 542  KRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDDMLIASKNSVAIAKLKGQLSN 363
            KRFDSFM+  G+ RS +D CVY+ K  +G  IYLLLYVDD+LIA+K+   I  LK QLS+
Sbjct: 968  KRFDSFMLSHGFKRSEFDSCVYI-KFVNGSPIYLLLYVDDILIAAKSKEQITTLKKQLSS 1026

Query: 362  EFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQKFNYDSDAKAVNTPLAPHFK 183
            EF+MKDLG A+KILGMEI RD+    + L+Q+ Y++K+LQ FN   DAK V+TP+APHFK
Sbjct: 1027 EFDMKDLGAAKKILGMEITRDKNSGLLFLSQQSYIKKVLQCFNM-HDAKPVSTPIAPHFK 1085

Query: 182  LSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLSQAVSMVSRYMHDPVRGHWEA 3
            LSA     T ED EYMS VPY++AVGSLMYAMVC+RPDLS A+S+VSRYM +P + HW+A
Sbjct: 1086 LSALQCANTDEDVEYMSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMTNPGKEHWKA 1145


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]
          Length = 1335

 Score =  439 bits (1130), Expect = e-139
 Identities = 230/380 (60%), Positives = 287/380 (75%), Gaps = 5/380 (1%)
 Frame = -2

Query: 1127 LLQLISQSVIKKPKRYDDV--LVAFALP-AEVIED-SIPLTYREAELSSESSRWREAMVE 960
            + Q  S+   K PKR  +   L  +AL  AE +E+   P TY+EA    +S  W  AM E
Sbjct: 781  IAQRKSKRTTKPPKRLIEECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMHE 840

Query: 959  EMESLHKNNTWELAKLPKGKKAIGCKWVYAKKEG-SLNEGVRFKARLVAKGYAQVEGVDY 783
            EM+SL KN+TWE+  LPK KK I CKW++ +KE  SL+E  ++KARLVA+GY+Q+ GVDY
Sbjct: 841  EMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEALSLSEPPKYKARLVARGYSQIPGVDY 900

Query: 782  NEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEE 603
            N+VFSPVVKHSSIR  L++VA +DL+L QLDVKTAFLHG+L+E+IYM QP GF   GKE+
Sbjct: 901  NDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEK 960

Query: 602  LVCKLKKSLYGLKQSPRQWYKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDD 423
             VCKLK+SLYGLKQSPRQW KRFDSFM+   + RS YD CVY+ K  +G  IYLLLYVDD
Sbjct: 961  YVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYI-KHVNGSPIYLLLYVDD 1019

Query: 422  MLIASKNSVAIAKLKGQLSNEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQ 243
            MLIA+K+ + I KLK  LS+EF+MKDLG A+KILGMEI RDRK   + L+Q  Y++K+LQ
Sbjct: 1020 MLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQ 1079

Query: 242  KFNYDSDAKAVNTPLAPHFKLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLS 63
            +FN   +AKAV+TP+APHFKLSA   P T  + EYMS VPY++AVGSLMYAMVC+RPDLS
Sbjct: 1080 RFNM-QNAKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLS 1138

Query: 62   QAVSMVSRYMHDPVRGHWEA 3
             A+S+VSRYM +P + HW A
Sbjct: 1139 YAMSLVSRYMSNPGKEHWRA 1158


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  436 bits (1121), Expect = e-138
 Identities = 228/370 (61%), Positives = 288/370 (77%), Gaps = 5/370 (1%)
 Frame = -2

Query: 1100 IKKPKRYDDV--LVAFALP-AEVIEDSI-PLTYREAELSSESSRWREAMVEEMESLHKNN 933
            IK P+RY +   +VA+AL  AE IE +  P TY EA +S   +RW  AM +EMESL KN+
Sbjct: 666  IKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDGCNRWITAMHDEMESLEKNH 725

Query: 932  TWELAKLPKGKKAIGCKWVYAKKEG-SLNEGVRFKARLVAKGYAQVEGVDYNEVFSPVVK 756
            TWEL KLPK KK I CKW++ +K+G S ++  R+KARLVAKGY+Q+ G+D+N+VFSPV+K
Sbjct: 726  TWELVKLPKEKKPIRCKWIFKRKKGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVLK 785

Query: 755  HSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEELVCKLKKSL 576
            HSSIR LL++VA +D +L Q+DVKTAFLHG+L+E+IYM QP GF   GKE LV +LKKSL
Sbjct: 786  HSSIRTLLSIVAVHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVYRLKKSL 845

Query: 575  YGLKQSPRQWYKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDDMLIASKNSV 396
            YGLKQSPRQWYKRFDSFM  + + RS+YD CVYL K+  G  IYLLLYVDDMLIA+K+  
Sbjct: 846  YGLKQSPRQWYKRFDSFMFSQKFRRSNYDSCVYL-KVVDGSSIYLLLYVDDMLIAAKDKS 904

Query: 395  AIAKLKGQLSNEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQKFNYDSDAK 216
             I KLK QLS+EFEMKDLG A+KILGMEI R+R   ++ L+QKGY+ K+L++FN   DAK
Sbjct: 905  EIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNM-HDAK 963

Query: 215  AVNTPLAPHFKLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLSQAVSMVSRY 36
             V+TPLA HF+LS+ + P++  D EYMS VPY + VGSLMYAMVC+R DLS A+S+VSRY
Sbjct: 964  PVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYLSVVGSLMYAMVCSRLDLSHALSVVSRY 1023

Query: 35   MHDPVRGHWE 6
            M +P + HW+
Sbjct: 1024 MANPGKEHWK 1033


>ref|XP_015080794.1| PREDICTED: uncharacterized protein LOC107024343 [Solanum pennellii]
          Length = 1892

 Score =  446 bits (1147), Expect = e-138
 Identities = 228/371 (61%), Positives = 285/371 (76%), Gaps = 5/371 (1%)
 Frame = -2

Query: 1100 IKKPKRYDD----VLVAFALPAEVIEDSIPLTYREAELSSESSRWREAMVEEMESLHKNN 933
            I+KP+R  +    +  AF    E I+D  P +Y EA    ++++W+ AM+EEMESLH+N 
Sbjct: 1349 IRKPERLIEQENLIAQAFVAAEEEIKDLEPSSYIEATSCKDAAQWQLAMMEEMESLHRNE 1408

Query: 932  TWELAKLPKGKKAIGCKWVYAKKEGSLN-EGVRFKARLVAKGYAQVEGVDYNEVFSPVVK 756
            TW L K PKG + +GCKWVY KKEG    E  RFKARLVAKG++Q EG+DYNE+FSPVVK
Sbjct: 1409 TWVLVKRPKGMRTVGCKWVYKKKEGIPEVEAARFKARLVAKGFSQKEGIDYNEIFSPVVK 1468

Query: 755  HSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEELVCKLKKSL 576
            HSSIR+LLALVAQ+DL+L QLDVKTAFLHGDL+E IYM QP GF A GKE+ VC+LKKSL
Sbjct: 1469 HSSIRVLLALVAQFDLELQQLDVKTAFLHGDLEETIYMDQPEGFLAEGKEDHVCQLKKSL 1528

Query: 575  YGLKQSPRQWYKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDDMLIASKNSV 396
            YGLKQSPRQWYKRFD+FM   G++RS++D CVY  K+     IYLLLYVDDMLIA+ N  
Sbjct: 1529 YGLKQSPRQWYKRFDAFMTTHGFSRSAFDSCVYHKKMSGNSMIYLLLYVDDMLIAANNIT 1588

Query: 395  AIAKLKGQLSNEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQKFNYDSDAK 216
             I  LK  LS EF+MKDLG A+KILGMEI R+     V L+QK Y+RK+L++FN D  +K
Sbjct: 1589 EINILKKLLSKEFDMKDLGVAKKILGMEISRE--NGVVHLSQKRYIRKVLERFNMDM-SK 1645

Query: 215  AVNTPLAPHFKLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLSQAVSMVSRY 36
             V+TPLA HFKLS    P+++++ E+MS VPYA+AVGS+MYAMVCTRPD++Q+VS+VS+Y
Sbjct: 1646 PVSTPLASHFKLSELQMPQSMDEVEHMSKVPYASAVGSIMYAMVCTRPDIAQSVSVVSKY 1705

Query: 35   MHDPVRGHWEA 3
            M +P + HWEA
Sbjct: 1706 MANPGKRHWEA 1716


>gb|PRQ16639.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 502

 Score =  414 bits (1065), Expect = e-138
 Identities = 199/323 (61%), Positives = 258/323 (79%), Gaps = 1/323 (0%)
 Frame = -2

Query: 968 MVEEMESLHKNNTWELAKLPKGKKAIGCKWVYAKKEGSLN-EGVRFKARLVAKGYAQVEG 792
           M EEMESLHKN+ WEL   PK +K +GCKWV+ KKEG  + + +++KARLVAKGY+Q EG
Sbjct: 1   MTEEMESLHKNSVWELVPKPKERKLVGCKWVFRKKEGVHDADAIKYKARLVAKGYSQKEG 60

Query: 791 VDYNEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAG 612
           VDY+E+FSPVVKH+SIR+LL++ AQYD+++ Q+DVKTAFLHGDL+E+IYM+QP GF   G
Sbjct: 61  VDYDEIFSPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETG 120

Query: 611 KEELVCKLKKSLYGLKQSPRQWYKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLY 432
           KE+LVC+L+KSLYGLKQSPRQWYKRFD++M+  GYTR  YD CVY H    GE I LLLY
Sbjct: 121 KEDLVCRLRKSLYGLKQSPRQWYKRFDTYMLKIGYTRCLYDCCVYYHVFEDGEIILLLLY 180

Query: 431 VDDMLIASKNSVAIAKLKGQLSNEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRK 252
           VDDMLIA K+   I +LK +L  EF+MKDLG A+ ILG+EI RDRK  ++ L+Q+ Y+ +
Sbjct: 181 VDDMLIACKDMSKIEELKKKLGAEFDMKDLGAAQNILGIEIRRDRKAGKIWLSQEKYILR 240

Query: 251 MLQKFNYDSDAKAVNTPLAPHFKLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRP 72
           +L++FN D  AK V+ PLA H++LSAK  P + ++ + M  VPYA+AVG LMYAM+CTRP
Sbjct: 241 VLERFNMDG-AKVVSIPLAAHYQLSAKQRPSSQKEIDAMKDVPYASAVGCLMYAMICTRP 299

Query: 71  DLSQAVSMVSRYMHDPVRGHWEA 3
           DL+QA+S+VS+YM +P + HWEA
Sbjct: 300 DLAQALSVVSKYMSNPGKPHWEA 322


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  437 bits (1124), Expect = e-138
 Identities = 229/380 (60%), Positives = 286/380 (75%), Gaps = 5/380 (1%)
 Frame = -2

Query: 1127 LLQLISQSVIKKPKRYDDV--LVAFALP-AEVIED-SIPLTYREAELSSESSRWREAMVE 960
            + Q  S+   K PKR  +   L  +AL  AE +E+   P TY+EA    +S  W  AM E
Sbjct: 779  IAQRKSKRTTKPPKRLIEECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMHE 838

Query: 959  EMESLHKNNTWELAKLPKGKKAIGCKWVYAKKEG-SLNEGVRFKARLVAKGYAQVEGVDY 783
            EM+SL KN+TWE+  LPK KK I CKW++ +KEG S +E  ++KARLVA+GY+Q+ GVDY
Sbjct: 839  EMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDY 898

Query: 782  NEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEE 603
            N+VFSPVVKHSSIR  L++VA +DL+L QLDVKTAFLHG+L+E+IYM QP GF   GKE+
Sbjct: 899  NDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEK 958

Query: 602  LVCKLKKSLYGLKQSPRQWYKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDD 423
             VCKLK+SLYGLKQSPRQW KRFDSFM+   + RS YD CVY+ K  +G  IYLLLYVDD
Sbjct: 959  YVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYI-KHVNGSPIYLLLYVDD 1017

Query: 422  MLIASKNSVAIAKLKGQLSNEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQ 243
            MLIA+K+ + I KLK  LS+EF+MKDLG A+KILGMEI RDRK   + L+Q  Y++K+LQ
Sbjct: 1018 MLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQ 1077

Query: 242  KFNYDSDAKAVNTPLAPHFKLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLS 63
            +FN   +AKAV+TP+APHFKLSA   P    + EYMS VPY++AVGSLMYAMVC+RPDLS
Sbjct: 1078 RFNM-QNAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLS 1136

Query: 62   QAVSMVSRYMHDPVRGHWEA 3
             A+S+VSRYM +P + HW A
Sbjct: 1137 YAMSLVSRYMSNPGKEHWRA 1156


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1373

 Score =  437 bits (1124), Expect = e-138
 Identities = 229/380 (60%), Positives = 286/380 (75%), Gaps = 5/380 (1%)
 Frame = -2

Query: 1127 LLQLISQSVIKKPKRYDDV--LVAFALP-AEVIED-SIPLTYREAELSSESSRWREAMVE 960
            + Q  S+   K PKR  +   L  +AL  AE +E+   P TY+EA    +S  W  AM E
Sbjct: 779  IAQRKSKRTTKPPKRLIEECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWISAMHE 838

Query: 959  EMESLHKNNTWELAKLPKGKKAIGCKWVYAKKEG-SLNEGVRFKARLVAKGYAQVEGVDY 783
            EM+SL KN+TWE+  LPK KK I CKW++ +KEG S +E  ++KARLVA+GY+Q+ GVDY
Sbjct: 839  EMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDY 898

Query: 782  NEVFSPVVKHSSIRILLALVAQYDLDLVQLDVKTAFLHGDLDEEIYMTQPTGFKAAGKEE 603
            N+VFSPVVKHSSIR  L++VA +DL+L QLDVKTAFLHG+L+E+IYM QP GF   GKE+
Sbjct: 899  NDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEK 958

Query: 602  LVCKLKKSLYGLKQSPRQWYKRFDSFMVGKGYTRSSYDPCVYLHKLPSGEYIYLLLYVDD 423
             VCKLK+SLYGLKQSPRQW KRFDSFM+   + RS YD CVY+ K  +G  IYLLLYVDD
Sbjct: 959  YVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYI-KHVNGSPIYLLLYVDD 1017

Query: 422  MLIASKNSVAIAKLKGQLSNEFEMKDLGEARKILGMEIERDRKRERVCLTQKGYLRKMLQ 243
            MLIA+K+ + I KLK  LS+EF+MKDLG A+KILGMEI RDRK   + L+Q  Y++K+LQ
Sbjct: 1018 MLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQ 1077

Query: 242  KFNYDSDAKAVNTPLAPHFKLSAKMSPKTIEDREYMSHVPYANAVGSLMYAMVCTRPDLS 63
            +FN   +AKAV+TP+APHFKLSA   P    + EYMS VPY++AVGSLMYAMVC+RPDLS
Sbjct: 1078 RFNM-QNAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLS 1136

Query: 62   QAVSMVSRYMHDPVRGHWEA 3
             A+S+VSRYM +P + HW A
Sbjct: 1137 YAMSLVSRYMSNPGKEHWRA 1156