BLASTX nr result
ID: Ophiopogon22_contig00011348
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00011348
(551 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020256373.1| mediator of RNA polymerase II transcription ... 143 8e-40
ref|XP_020256372.1| mediator of RNA polymerase II transcription ... 143 1e-39
ref|XP_017700136.1| PREDICTED: mediator of RNA polymerase II tra... 135 1e-36
ref|XP_010909088.1| PREDICTED: mediator of RNA polymerase II tra... 135 1e-36
ref|XP_008800293.1| PREDICTED: mediator of RNA polymerase II tra... 135 1e-36
ref|XP_018679922.1| PREDICTED: mediator of RNA polymerase II tra... 134 2e-36
ref|XP_018679921.1| PREDICTED: mediator of RNA polymerase II tra... 134 3e-36
ref|XP_019702908.1| PREDICTED: mediator of RNA polymerase II tra... 134 6e-36
ref|XP_009397400.1| PREDICTED: mediator of RNA polymerase II tra... 134 6e-36
ref|XP_020103598.1| mediator of RNA polymerase II transcription ... 131 5e-35
ref|XP_020103597.1| mediator of RNA polymerase II transcription ... 131 5e-35
gb|PKA50862.1| Mediator of RNA polymerase II transcription subun... 131 6e-35
ref|XP_020103596.1| mediator of RNA polymerase II transcription ... 131 6e-35
ref|XP_020103595.1| mediator of RNA polymerase II transcription ... 131 6e-35
ref|XP_020103593.1| mediator of RNA polymerase II transcription ... 131 7e-35
ref|XP_020103592.1| mediator of RNA polymerase II transcription ... 131 8e-35
ref|XP_021321589.1| mediator of RNA polymerase II transcription ... 125 7e-33
gb|OMO68067.1| putative RNA binding protein [Corchorus olitorius] 122 8e-33
ref|XP_021661545.1| mediator of RNA polymerase II transcription ... 125 8e-33
ref|XP_021661544.1| mediator of RNA polymerase II transcription ... 125 9e-33
>ref|XP_020256373.1| mediator of RNA polymerase II transcription subunit 19a-like
isoform X2 [Asparagus officinalis]
Length = 193
Score = 143 bits (360), Expect = 8e-40
Identities = 66/74 (89%), Positives = 71/74 (95%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLISHYKL+ HHDFFCK +LPL+ISDTHYLHNVVG+TEIRKGEGMELDQLFQTAPYLRE
Sbjct: 18 VDLISHYKLVAHHDFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMELDQLFQTAPYLRE 77
Query: 181 ITAHIQPFDLDALG 222
TAHIQPFDLD+LG
Sbjct: 78 TTAHIQPFDLDSLG 91
>ref|XP_020256372.1| mediator of RNA polymerase II transcription subunit 19a-like
isoform X1 [Asparagus officinalis]
gb|ONK74557.1| uncharacterized protein A4U43_C03F7640 [Asparagus officinalis]
Length = 205
Score = 143 bits (360), Expect = 1e-39
Identities = 66/74 (89%), Positives = 71/74 (95%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLISHYKL+ HHDFFCK +LPL+ISDTHYLHNVVG+TEIRKGEGMELDQLFQTAPYLRE
Sbjct: 18 VDLISHYKLVAHHDFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMELDQLFQTAPYLRE 77
Query: 181 ITAHIQPFDLDALG 222
TAHIQPFDLD+LG
Sbjct: 78 TTAHIQPFDLDSLG 91
>ref|XP_017700136.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X2 [Phoenix dactylifera]
Length = 200
Score = 135 bits (340), Expect = 1e-36
Identities = 62/74 (83%), Positives = 68/74 (91%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLI+HYKL HHDFFCK +LPL+ISDTHYLHNVVG+TEIRKG+GMELDQLFQ APYLRE
Sbjct: 19 VDLINHYKLWAHHDFFCKRSLPLSISDTHYLHNVVGDTEIRKGDGMELDQLFQNAPYLRE 78
Query: 181 ITAHIQPFDLDALG 222
TAHI+PFDLD LG
Sbjct: 79 TTAHIRPFDLDILG 92
>ref|XP_010909088.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like [Elaeis guineensis]
Length = 212
Score = 135 bits (340), Expect = 1e-36
Identities = 63/74 (85%), Positives = 67/74 (90%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLI+HYKLL HHDFFCK LPL+ISDTHYLHN+VG+TEIRKGEGMELDQLFQ AP LRE
Sbjct: 19 VDLINHYKLLAHHDFFCKRTLPLSISDTHYLHNMVGDTEIRKGEGMELDQLFQNAPNLRE 78
Query: 181 ITAHIQPFDLDALG 222
TAHIQPFDLD LG
Sbjct: 79 TTAHIQPFDLDILG 92
>ref|XP_008800293.1| PREDICTED: mediator of RNA polymerase II transcription subunit
19a-like isoform X1 [Phoenix dactylifera]
Length = 212
Score = 135 bits (340), Expect = 1e-36
Identities = 62/74 (83%), Positives = 68/74 (91%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLI+HYKL HHDFFCK +LPL+ISDTHYLHNVVG+TEIRKG+GMELDQLFQ APYLRE
Sbjct: 19 VDLINHYKLWAHHDFFCKRSLPLSISDTHYLHNVVGDTEIRKGDGMELDQLFQNAPYLRE 78
Query: 181 ITAHIQPFDLDALG 222
TAHI+PFDLD LG
Sbjct: 79 TTAHIRPFDLDILG 92
>ref|XP_018679922.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
isoform X3 [Musa acuminata subsp. malaccensis]
Length = 183
Score = 134 bits (337), Expect = 2e-36
Identities = 63/74 (85%), Positives = 66/74 (89%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLI+HYKLL HHDFFCK LPL+I DTHYLHNVVGETEIRKGEGMELDQLF APYLRE
Sbjct: 19 VDLINHYKLLTHHDFFCKRNLPLSILDTHYLHNVVGETEIRKGEGMELDQLFHNAPYLRE 78
Query: 181 ITAHIQPFDLDALG 222
TAHIQPFDL+ LG
Sbjct: 79 STAHIQPFDLELLG 92
>ref|XP_018679921.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
isoform X2 [Musa acuminata subsp. malaccensis]
Length = 206
Score = 134 bits (337), Expect = 3e-36
Identities = 63/74 (85%), Positives = 66/74 (89%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLI+HYKLL HHDFFCK LPL+I DTHYLHNVVGETEIRKGEGMELDQLF APYLRE
Sbjct: 19 VDLINHYKLLTHHDFFCKRNLPLSILDTHYLHNVVGETEIRKGEGMELDQLFHNAPYLRE 78
Query: 181 ITAHIQPFDLDALG 222
TAHIQPFDL+ LG
Sbjct: 79 STAHIQPFDLELLG 92
>ref|XP_019702908.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
[Elaeis guineensis]
Length = 212
Score = 134 bits (336), Expect = 6e-36
Identities = 62/74 (83%), Positives = 68/74 (91%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLI+HYKL HHDFFCK LPL+ISDTHYLHNVVG+TEIRKGEGMELDQLFQ+APYLRE
Sbjct: 19 VDLINHYKLWAHHDFFCKRTLPLSISDTHYLHNVVGDTEIRKGEGMELDQLFQSAPYLRE 78
Query: 181 ITAHIQPFDLDALG 222
TA+I+PFDLD LG
Sbjct: 79 TTANIRPFDLDILG 92
>ref|XP_009397400.1| PREDICTED: mediator of RNA polymerase II transcription subunit 19a
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 227
Score = 134 bits (337), Expect = 6e-36
Identities = 63/74 (85%), Positives = 66/74 (89%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLI+HYKLL HHDFFCK LPL+I DTHYLHNVVGETEIRKGEGMELDQLF APYLRE
Sbjct: 19 VDLINHYKLLTHHDFFCKRNLPLSILDTHYLHNVVGETEIRKGEGMELDQLFHNAPYLRE 78
Query: 181 ITAHIQPFDLDALG 222
TAHIQPFDL+ LG
Sbjct: 79 STAHIQPFDLELLG 92
>ref|XP_020103598.1| mediator of RNA polymerase II transcription subunit 19a isoform X6
[Ananas comosus]
Length = 205
Score = 131 bits (329), Expect = 5e-35
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLISHYKLL HHDFFCK +LP++ISDTHYLHNVVG+TEIRKGEGMELDQLFQ PYLRE
Sbjct: 19 VDLISHYKLLAHHDFFCKRSLPVSISDTHYLHNVVGDTEIRKGEGMELDQLFQNTPYLRE 78
Query: 181 ITAHIQPFDLDALG 222
A IQ FDLD LG
Sbjct: 79 TAARIQQFDLDTLG 92
>ref|XP_020103597.1| mediator of RNA polymerase II transcription subunit 19a isoform X5
[Ananas comosus]
Length = 207
Score = 131 bits (329), Expect = 5e-35
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLISHYKLL HHDFFCK +LP++ISDTHYLHNVVG+TEIRKGEGMELDQLFQ PYLRE
Sbjct: 19 VDLISHYKLLAHHDFFCKRSLPVSISDTHYLHNVVGDTEIRKGEGMELDQLFQNTPYLRE 78
Query: 181 ITAHIQPFDLDALG 222
A IQ FDLD LG
Sbjct: 79 TAARIQQFDLDTLG 92
>gb|PKA50862.1| Mediator of RNA polymerase II transcription subunit 19a [Apostasia
shenzhenica]
Length = 208
Score = 131 bits (329), Expect = 6e-35
Identities = 62/74 (83%), Positives = 66/74 (89%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLISHYKLL HHDFFCK +LP +ISDTHYLHNVVG+TEIRKGEGMELDQLFQ APY RE
Sbjct: 19 VDLISHYKLLGHHDFFCKKSLPPSISDTHYLHNVVGDTEIRKGEGMELDQLFQNAPYFRE 78
Query: 181 ITAHIQPFDLDALG 222
TA+IQ FDL ALG
Sbjct: 79 TTAYIQTFDLQALG 92
>ref|XP_020103596.1| mediator of RNA polymerase II transcription subunit 19a isoform X4
[Ananas comosus]
Length = 208
Score = 131 bits (329), Expect = 6e-35
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLISHYKLL HHDFFCK +LP++ISDTHYLHNVVG+TEIRKGEGMELDQLFQ PYLRE
Sbjct: 19 VDLISHYKLLAHHDFFCKRSLPVSISDTHYLHNVVGDTEIRKGEGMELDQLFQNTPYLRE 78
Query: 181 ITAHIQPFDLDALG 222
A IQ FDLD LG
Sbjct: 79 TAARIQQFDLDTLG 92
>ref|XP_020103595.1| mediator of RNA polymerase II transcription subunit 19a isoform X3
[Ananas comosus]
gb|OAY74958.1| Mediator of RNA polymerase II transcription subunit 19a [Ananas
comosus]
Length = 211
Score = 131 bits (329), Expect = 6e-35
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLISHYKLL HHDFFCK +LP++ISDTHYLHNVVG+TEIRKGEGMELDQLFQ PYLRE
Sbjct: 19 VDLISHYKLLAHHDFFCKRSLPVSISDTHYLHNVVGDTEIRKGEGMELDQLFQNTPYLRE 78
Query: 181 ITAHIQPFDLDALG 222
A IQ FDLD LG
Sbjct: 79 TAARIQQFDLDTLG 92
>ref|XP_020103593.1| mediator of RNA polymerase II transcription subunit 19a isoform X2
[Ananas comosus]
Length = 214
Score = 131 bits (329), Expect = 7e-35
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLISHYKLL HHDFFCK +LP++ISDTHYLHNVVG+TEIRKGEGMELDQLFQ PYLRE
Sbjct: 19 VDLISHYKLLAHHDFFCKRSLPVSISDTHYLHNVVGDTEIRKGEGMELDQLFQNTPYLRE 78
Query: 181 ITAHIQPFDLDALG 222
A IQ FDLD LG
Sbjct: 79 TAARIQQFDLDTLG 92
>ref|XP_020103592.1| mediator of RNA polymerase II transcription subunit 19a isoform X1
[Ananas comosus]
Length = 219
Score = 131 bits (329), Expect = 8e-35
Identities = 61/74 (82%), Positives = 65/74 (87%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLISHYKLL HHDFFCK +LP++ISDTHYLHNVVG+TEIRKGEGMELDQLFQ PYLRE
Sbjct: 19 VDLISHYKLLAHHDFFCKRSLPVSISDTHYLHNVVGDTEIRKGEGMELDQLFQNTPYLRE 78
Query: 181 ITAHIQPFDLDALG 222
A IQ FDLD LG
Sbjct: 79 TAARIQQFDLDTLG 92
>ref|XP_021321589.1| mediator of RNA polymerase II transcription subunit 19a-like
isoform X2 [Sorghum bicolor]
Length = 210
Score = 125 bits (315), Expect = 7e-33
Identities = 60/74 (81%), Positives = 66/74 (89%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLISHYKLLPHHDFFCK LPLAISDTHYLHNVVG+TEIRKGEGMELDQL Q A Y+R+
Sbjct: 12 VDLISHYKLLPHHDFFCKKPLPLAISDTHYLHNVVGDTEIRKGEGMELDQLVQNA-YMRD 70
Query: 181 ITAHIQPFDLDALG 222
A+IQPFD++ LG
Sbjct: 71 KPAYIQPFDMETLG 84
>gb|OMO68067.1| putative RNA binding protein [Corchorus olitorius]
Length = 113
Score = 122 bits (307), Expect = 8e-33
Identities = 56/73 (76%), Positives = 63/73 (86%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLISHYKLLPHHDFFCK +LPL+I+DTHYLHNVVG+TEIRKGEGM+LDQL Q + R+
Sbjct: 19 VDLISHYKLLPHHDFFCKRSLPLSIADTHYLHNVVGDTEIRKGEGMQLDQLIQNTSHNRD 78
Query: 181 ITAHIQPFDLDAL 219
A IQPFDLD L
Sbjct: 79 TNARIQPFDLDVL 91
>ref|XP_021661545.1| mediator of RNA polymerase II transcription subunit 19a-like
isoform X3 [Hevea brasiliensis]
Length = 200
Score = 125 bits (314), Expect = 8e-33
Identities = 57/73 (78%), Positives = 63/73 (86%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLISHYKLLPHH+FFCK +LPL+ISDTHYLHNVVG+TEIRKGEGM+LDQL Q PY R+
Sbjct: 19 VDLISHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMQLDQLIQNIPYSRD 78
Query: 181 ITAHIQPFDLDAL 219
IQPFDLD L
Sbjct: 79 SNTRIQPFDLDVL 91
>ref|XP_021661544.1| mediator of RNA polymerase II transcription subunit 19a-like
isoform X2 [Hevea brasiliensis]
Length = 203
Score = 125 bits (314), Expect = 9e-33
Identities = 57/73 (78%), Positives = 63/73 (86%)
Frame = +1
Query: 1 VDLISHYKLLPHHDFFCKGALPLAISDTHYLHNVVGETEIRKGEGMELDQLFQTAPYLRE 180
VDLISHYKLLPHH+FFCK +LPL+ISDTHYLHNVVG+TEIRKGEGM+LDQL Q PY R+
Sbjct: 19 VDLISHYKLLPHHEFFCKRSLPLSISDTHYLHNVVGDTEIRKGEGMQLDQLIQNIPYSRD 78
Query: 181 ITAHIQPFDLDAL 219
IQPFDLD L
Sbjct: 79 SNTRIQPFDLDVL 91