BLASTX nr result
ID: Ophiopogon22_contig00011207
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00011207
(532 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020541466.1| DNA-directed RNA polymerase II subunit 1-lik... 335 e-116
ref|XP_018854550.1| PREDICTED: DNA-directed RNA polymerase II su... 340 e-115
gb|ACD63085.1| RNA polymerase II largest subunit, partial [Illic... 350 e-111
gb|ACD63089.1| RNA polymerase II largest subunit, partial [Perse... 349 e-111
gb|ACD63081.1| RNA polymerase II largest subunit, partial [Aspar... 348 e-111
gb|AAY89349.1| RNA polymerase II largest subunit, partial [Antir... 343 e-111
gb|ACD63088.1| RNA polymerase II largest subunit, partial [Papav... 348 e-111
gb|ACD63086.1| RNA polymerase II largest subunit, partial [Lirio... 348 e-111
gb|EPS58483.1| hypothetical protein M569_16331, partial [Genlise... 339 e-111
gb|ACD63091.1| RNA polymerase II largest subunit, partial [Sarum... 347 e-111
gb|ACD63083.1| RNA polymerase II largest subunit, partial [Cerat... 347 e-111
gb|AAQ08516.1| RNA polymerase II largest subunit, partial [Magno... 347 e-111
gb|ACD63084.1| RNA polymerase II largest subunit, partial [Drimy... 347 e-110
gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japo... 341 e-110
gb|AAY89350.1| RNA polymerase II largest subunit, partial [Solan... 340 e-110
emb|CBI18915.3| unnamed protein product, partial [Vitis vinifera] 352 e-109
gb|POF11882.1| dna-directed rna polymerase ii subunit 1 [Quercus... 340 e-109
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su... 352 e-109
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 352 e-109
gb|OVA08877.1| RNA polymerase [Macleaya cordata] 352 e-109
>ref|XP_020541466.1| DNA-directed RNA polymerase II subunit 1-like, partial [Jatropha
curcas]
Length = 176
Score = 335 bits (860), Expect = e-116
Identities = 160/175 (91%), Positives = 168/175 (96%)
Frame = +3
Query: 6 MPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMG 185
MPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFE RAEVLELMMVPKCIVSPQSNRPVMG
Sbjct: 1 MPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFEARAEVLELMMVPKCIVSPQSNRPVMG 60
Query: 186 IVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLII 365
IVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKP PLWTGKQVFNLII
Sbjct: 61 IVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLII 120
Query: 366 PKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
PKQINL+RT+AWH++++ G ITPGDT VRIEKGELL+GTLCK+TLGT GSLIHV
Sbjct: 121 PKQINLIRTAAWHTDTDRGIITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHV 175
>ref|XP_018854550.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like, partial
[Juglans regia]
Length = 387
Score = 340 bits (872), Expect = e-115
Identities = 164/176 (93%), Positives = 167/176 (94%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 207 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 266
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDT I KDVFMNILMWWEDFDGK+PAPAILKP P WTGKQVFNLI
Sbjct: 267 GIVQDTLLGCRKITKRDTLISKDVFMNILMWWEDFDGKIPAPAILKPGPYWTGKQVFNLI 326
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINL RTSAWH ESETGFITPGDTQVRIE+GELL GTLCK+TLGT GSLIHV
Sbjct: 327 IPKQINLTRTSAWHLESETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGSLIHV 382
>gb|ACD63085.1| RNA polymerase II largest subunit, partial [Illicium parviflorum]
Length = 1013
Score = 350 bits (897), Expect = e-111
Identities = 168/176 (95%), Positives = 172/176 (97%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 397 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 456
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKP PLWTGKQVFNLI
Sbjct: 457 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLI 516
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINL+RTSAWHSESETGFITPGDT VRIEKGELL+GTLCK+TLGT GSLIHV
Sbjct: 517 IPKQINLIRTSAWHSESETGFITPGDTHVRIEKGELLSGTLCKKTLGTSTGSLIHV 572
>gb|ACD63089.1| RNA polymerase II largest subunit, partial [Persea americana]
Length = 1009
Score = 349 bits (895), Expect = e-111
Identities = 168/176 (95%), Positives = 171/176 (97%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 393 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 452
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKP PLWTGKQVFNLI
Sbjct: 453 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLI 512
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINL+ TSAWHSESETGFITPGDTQVRIEKGELL GTLCK+TLGT GSLIHV
Sbjct: 513 IPKQINLIXTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHV 568
>gb|ACD63081.1| RNA polymerase II largest subunit, partial [Asparagus officinalis]
Length = 1009
Score = 348 bits (894), Expect = e-111
Identities = 169/176 (96%), Positives = 170/176 (96%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 395 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 454
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PAILKP PLWTGKQVFNLI
Sbjct: 455 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPTPAILKPRPLWTGKQVFNLI 514
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINL R SAWHSESETGFITPGDTQVRIEKGELLTGTLCK+TLGT GSLIHV
Sbjct: 515 IPKQINLSRASAWHSESETGFITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHV 570
>gb|AAY89349.1| RNA polymerase II largest subunit, partial [Antirrhinum majus]
Length = 780
Score = 343 bits (880), Expect = e-111
Identities = 166/176 (94%), Positives = 168/176 (95%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVM
Sbjct: 152 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVM 211
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKP PLWTGKQVFNLI
Sbjct: 212 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLI 271
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINLLR SAWH E E GFITPGDTQVRIEKGELLTGTLCK+TLGT GSLIHV
Sbjct: 272 IPKQINLLRYSAWHQEKEKGFITPGDTQVRIEKGELLTGTLCKKTLGTGTGSLIHV 327
>gb|ACD63088.1| RNA polymerase II largest subunit, partial [Papaver orientale]
Length = 1010
Score = 348 bits (894), Expect = e-111
Identities = 168/176 (95%), Positives = 171/176 (97%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 394 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 453
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKP PLWTGKQVFNLI
Sbjct: 454 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLI 513
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINLLRTSAWHSE+ETGFITPGDTQVRIE+GELLTGTLCK+ LGT GSLIHV
Sbjct: 514 IPKQINLLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHV 569
>gb|ACD63086.1| RNA polymerase II largest subunit, partial [Liriodendron
tulipifera]
Length = 1010
Score = 348 bits (894), Expect = e-111
Identities = 166/176 (94%), Positives = 172/176 (97%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 394 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 453
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPA+LKP PLWTGKQVFNLI
Sbjct: 454 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAVLKPRPLWTGKQVFNLI 513
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINL+RTSAWHSE+ETGFITPGDTQVRIE+GELL GTLCK+TLGT GSLIHV
Sbjct: 514 IPKQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGSLIHV 569
>gb|EPS58483.1| hypothetical protein M569_16331, partial [Genlisea aurea]
Length = 652
Score = 339 bits (870), Expect = e-111
Identities = 165/176 (93%), Positives = 168/176 (95%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 475 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 534
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKP PLWTGKQVFNLI
Sbjct: 535 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLI 594
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINLLR S WH E+E GFIT GDTQVRIEKGELL+GTLCK+TLGT GSLIHV
Sbjct: 595 IPKQINLLRYSMWHQETEKGFITLGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHV 650
>gb|ACD63091.1| RNA polymerase II largest subunit, partial [Saruma henryi]
Length = 1009
Score = 347 bits (891), Expect = e-111
Identities = 166/176 (94%), Positives = 171/176 (97%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 393 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 452
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPA+LKP PLWTGKQVFNLI
Sbjct: 453 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAVLKPRPLWTGKQVFNLI 512
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINLLRTSAWH+ESETGFITPGDTQVRIE+GELL GTLCK+ LGT GSLIHV
Sbjct: 513 IPKQINLLRTSAWHAESETGFITPGDTQVRIERGELLAGTLCKKALGTSTGSLIHV 568
>gb|ACD63083.1| RNA polymerase II largest subunit, partial [Ceratophyllum demersum]
Length = 1010
Score = 347 bits (891), Expect = e-111
Identities = 166/176 (94%), Positives = 171/176 (97%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 394 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 453
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKP PLWTGKQVFNLI
Sbjct: 454 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLI 513
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINL+RTSAWHSE+ETGFITPGDTQVRIE+GELL GTLCK+TLGT GSLIHV
Sbjct: 514 IPKQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGSLIHV 569
>gb|AAQ08516.1| RNA polymerase II largest subunit, partial [Magnolia x soulangeana]
Length = 1010
Score = 347 bits (891), Expect = e-111
Identities = 166/176 (94%), Positives = 171/176 (97%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 394 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 453
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKP PLWTGKQVFNLI
Sbjct: 454 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPTILKPRPLWTGKQVFNLI 513
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINL+RTSAWHSE+ETGFITPGDTQVRIE+GELL GTLCK+TLGT GSLIHV
Sbjct: 514 IPKQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGSLIHV 569
>gb|ACD63084.1| RNA polymerase II largest subunit, partial [Drimys winteri]
Length = 1010
Score = 347 bits (889), Expect = e-110
Identities = 167/176 (94%), Positives = 171/176 (97%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 394 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 453
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKP PLWTGKQVFNLI
Sbjct: 454 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLI 513
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINL+R SAWHSE+ETGFITPGDTQVRIE+GELL GTLCK+TLGT GSLIHV
Sbjct: 514 IPKQINLIRQSAWHSETETGFITPGDTQVRIERGELLCGTLCKKTLGTSTGSLIHV 569
>gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japonica Group]
Length = 804
Score = 341 bits (874), Expect = e-110
Identities = 164/176 (93%), Positives = 169/176 (96%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 406 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 465
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDT IEKDVFMNILMWWEDFDGKVPAPAILKP P+WTGKQVFNLI
Sbjct: 466 GIVQDTLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLI 525
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPK INL+R SAWHSE+ETGFITPGDT VRIEKGELL+GTLCK+TLGT GSLIHV
Sbjct: 526 IPKPINLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHV 581
>gb|AAY89350.1| RNA polymerase II largest subunit, partial [Solanum lycopersicum]
Length = 773
Score = 340 bits (871), Expect = e-110
Identities = 162/176 (92%), Positives = 169/176 (96%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVM
Sbjct: 152 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVM 211
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKP PLWTGKQVFNLI
Sbjct: 212 GIVQDTLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLI 271
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINLLR S WH++SE G+ITPGDTQVRIEKGELL+GTLCK+TLGT GSLIHV
Sbjct: 272 IPKQINLLRYSVWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHV 327
>emb|CBI18915.3| unnamed protein product, partial [Vitis vinifera]
Length = 1565
Score = 352 bits (903), Expect = e-109
Identities = 170/176 (96%), Positives = 172/176 (97%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 523 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 582
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKP PLWTGKQVFNLI
Sbjct: 583 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLI 642
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELL GTLCK+TLGT GSLIHV
Sbjct: 643 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHV 698
>gb|POF11882.1| dna-directed rna polymerase ii subunit 1 [Quercus suber]
Length = 836
Score = 340 bits (872), Expect = e-109
Identities = 164/176 (93%), Positives = 168/176 (95%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 473 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 532
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDT I KDVFMNILMWWEDFDGK+PAPAILKP P WTGKQVFNLI
Sbjct: 533 GIVQDTLLGCRKITKRDTLIPKDVFMNILMWWEDFDGKIPAPAILKPGPYWTGKQVFNLI 592
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINL+RTSAWHSESETG ITPGDTQVRIE+GELL GTLCK+TLGT GSLIHV
Sbjct: 593 IPKQINLIRTSAWHSESETGSITPGDTQVRIERGELLAGTLCKKTLGTSTGSLIHV 648
>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 352 bits (903), Expect = e-109
Identities = 169/176 (96%), Positives = 173/176 (98%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 475 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 534
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKP PLWTGKQVFNLI
Sbjct: 535 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLI 594
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINL+RTSAWHSESETGFITPGDTQVRIE+GELLTGTLCK+TLGT GSLIHV
Sbjct: 595 IPKQINLMRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHV 650
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 352 bits (903), Expect = e-109
Identities = 170/176 (96%), Positives = 172/176 (97%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 475 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 534
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKP PLWTGKQVFNLI
Sbjct: 535 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLI 594
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELL GTLCK+TLGT GSLIHV
Sbjct: 595 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHV 650
>gb|OVA08877.1| RNA polymerase [Macleaya cordata]
Length = 1867
Score = 352 bits (903), Expect = e-109
Identities = 169/176 (96%), Positives = 173/176 (98%)
Frame = +3
Query: 3 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 182
IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM
Sbjct: 502 IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVM 561
Query: 183 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPTPLWTGKQVFNLI 362
GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKP PLWTGKQVFNL+
Sbjct: 562 GIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLL 621
Query: 363 IPKQINLLRTSAWHSESETGFITPGDTQVRIEKGELLTGTLCKRTLGTFPGSLIHV 530
IPKQINLLRTSAWHSESETGFITPGDTQVRIE+GELLTGTLCK+TLGT GSLIHV
Sbjct: 622 IPKQINLLRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHV 677