BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00010837
         (568 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposo...   195   6e-58
ref|XP_020250324.1| uncharacterized protein LOC109827718 [Aspara...   189   6e-58
ref|XP_016457574.1| PREDICTED: uncharacterized mitochondrial pro...   189   9e-58
gb|KYP35963.1| Retrovirus-related Pol polyprotein from transposo...   183   8e-55
ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116...   177   4e-53
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...   187   2e-52
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   189   2e-52
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   187   1e-51
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]          183   3e-50
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   181   4e-49
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   181   4e-49
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   179   8e-49
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   179   1e-48
gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposo...   172   3e-48
emb|CDP17738.1| unnamed protein product [Coffea canephora]            176   7e-48
gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo...   172   2e-47
dbj|GAV69956.1| gag_pre-integrs domain-containing protein [Cepha...   161   3e-47
dbj|GAV91597.1| gag_pre-integrs domain-containing protein [Cepha...   161   5e-47
gb|AAC12735.1| putative retrovirus-related polyprotein, partial ...   162   9e-47
gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo...   169   3e-46

>gb|PKA49510.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 365

 Score =  195 bits (495), Expect = 6e-58
 Identities = 92/173 (53%), Positives = 124/173 (71%), Gaps = 1/173 (0%)
 Frame = -1

Query: 568 DGGSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFS 389
           DGG V+MGNNS C+ VGIG+++I+  DGV RTLT VRHVPDL+K L+SLG L+A GC F 
Sbjct: 193 DGGRVIMGNNSECKSVGIGTIKIKMFDGVIRTLTEVRHVPDLRKGLISLGTLDASGCTFI 252

Query: 388 GEAGNVIVSRDSKV-LKGERIRNLYRLVGSVIVGDVSAAAEKVEDDTRLWHMRLGHMSEK 212
           G  G + V + + V +KGE+I +LYRL+G  I GD++  +   +DDT LWH RLGHMSE+
Sbjct: 253 GSDGIIKVKKGAPVVMKGEKIESLYRLIGKTITGDIAVTSSTDDDDTMLWHARLGHMSER 312

Query: 211 GLQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDV 53
           GL  LH R +L G+KSCK+DFC+FCV+G+Q +          K +L+ +H+DV
Sbjct: 313 GLLELHNRKLLKGIKSCKIDFCEFCVLGKQCRVKFVTSNKKSKNILEYVHSDV 365


>ref|XP_020250324.1| uncharacterized protein LOC109827718 [Asparagus officinalis]
          Length = 191

 Score =  189 bits (480), Expect = 6e-58
 Identities = 92/176 (52%), Positives = 124/176 (70%), Gaps = 1/176 (0%)
 Frame = -1

Query: 565 GGSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFSG 386
           GGSVLMGNN+VCR VGIG+VRIR  D + RTL+ +RH+PDLKKNL+SL +L++ GC ++G
Sbjct: 16  GGSVLMGNNAVCRTVGIGTVRIRYHDEIVRTLSDMRHIPDLKKNLISLSSLDSIGCSYTG 75

Query: 385 EAGNVIVSRDSKV-LKGERIRNLYRLVGSVIVGDVSAAAEKVEDDTRLWHMRLGHMSEKG 209
           E G + V++ S V +KG ++ +LY L GS + G  S  ++   D T+LWHMRLGHMSEKG
Sbjct: 76  EGGALRVTKGSLVVMKGSKVNSLYVLQGSTVTGSASVYSDVDRDTTQLWHMRLGHMSEKG 135

Query: 208 LQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPA 41
           + +L KRG+L G  +  LDFC+ CV G+Q +          K  LD IH+D+WGPA
Sbjct: 136 VTILSKRGLLCGDHTSSLDFCEHCVFGKQTRVSFSTGSHTTKDTLDYIHSDLWGPA 191


>ref|XP_016457574.1| PREDICTED: uncharacterized mitochondrial protein AtMg00300-like
           [Nicotiana tabacum]
          Length = 202

 Score =  189 bits (480), Expect = 9e-58
 Identities = 97/184 (52%), Positives = 127/184 (69%), Gaps = 3/184 (1%)
 Frame = -1

Query: 565 GGSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFSG 386
           GG+V+MGNN+ C IVGIGSVR+R  DGV RT+T VRHVPDLKKNL+SL  L+ QG ++  
Sbjct: 15  GGTVVMGNNATCAIVGIGSVRVRCHDGVVRTITQVRHVPDLKKNLISLSTLDEQGYRYMS 74

Query: 385 EAGNVIVSRDSKV-LKGERIRNLYRLVGSVIVGDVSAAAEKV--EDDTRLWHMRLGHMSE 215
           EAG + V++ S V LKG+    LY L GS IVG  +A+  ++  +D  RLWHMRLGHMS 
Sbjct: 75  EAGTIKVTKGSLVMLKGKLENGLYTLAGSTIVGSANASTVQLSNDDKARLWHMRLGHMSA 134

Query: 214 KGLQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPAPV 35
           +GL++L  R +L G K   LDFC+ CV+G+Q K          +GVLD IH+D+WGP+ +
Sbjct: 135 RGLEMLSNRTLLEGEKINTLDFCEHCVLGKQKKVSFSTGKHKTRGVLDYIHSDLWGPSKL 194

Query: 34  ASIG 23
            S G
Sbjct: 195 PSKG 198


>gb|KYP35963.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 255

 Score =  183 bits (465), Expect = 8e-55
 Identities = 89/190 (46%), Positives = 124/190 (65%), Gaps = 1/190 (0%)
 Frame = -1

Query: 568 DGGSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFS 389
           D GSVLMGN+  C++ GIG+VRI+  DG  +T T VRHV +LK+NL+SLG L   GC F+
Sbjct: 15  DAGSVLMGNDIACKVAGIGTVRIKLNDGSVKTFTKVRHVLELKRNLISLGMLGEVGCVFN 74

Query: 388 GEAGNVIVSRDSK-VLKGERIRNLYRLVGSVIVGDVSAAAEKVEDDTRLWHMRLGHMSEK 212
           GE+  +++ R SK ++KG R   LYRL G  IV   ++     ++  RLWH+RL H+SEK
Sbjct: 75  GESDAIVIKRGSKKIMKGIRQDGLYRLQGKTIVNPANSCFVFKDNSIRLWHLRLAHISEK 134

Query: 211 GLQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPAPVA 32
             + LHK+G+  G K  KLDFC+ C+ G+Q K          K +LD +H D+WGPA   
Sbjct: 135 EFEELHKQGLFEGTKYKKLDFCEHCLYGKQKKAKFPTGTHNTKEILDYVHYDIWGPAKTQ 194

Query: 31  SIGGARYFVT 2
           S+GGARY+++
Sbjct: 195 SLGGARYYIS 204


>ref|XP_019057165.1| PREDICTED: uncharacterized protein LOC109116374, partial [Tarenaya
           hassleriana]
          Length = 209

 Score =  177 bits (450), Expect = 4e-53
 Identities = 94/186 (50%), Positives = 120/186 (64%), Gaps = 3/186 (1%)
 Frame = -1

Query: 568 DGGSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFS 389
           DGG V MGNN   +  GIGS+R+R  DG  R LT VR+VP+LKKNL+SLG LE++G   +
Sbjct: 23  DGGVVYMGNNDALQATGIGSIRLRCHDGTTRILTEVRYVPNLKKNLISLGTLESKGYTVT 82

Query: 388 GEAGNV-IVSRDSKVLKGERIRNLYRLVGSVIVGDVSAAAEKVEDD--TRLWHMRLGHMS 218
              G + +VS    VLKG R  NLY   GS ++G V+  A + +D   TRLWHMRLGH  
Sbjct: 83  IRDGILKVVSGALVVLKGVRKNNLYYFKGSTVIGTVAVTAGEDKDSEVTRLWHMRLGHPG 142

Query: 217 EKGLQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPAP 38
           EK LQ L K+GVL G + CKL+FC+ CV+G+Q K          +G+LD IH+DVWGP  
Sbjct: 143 EKALQNLVKQGVLKGARLCKLEFCEHCVLGKQSKVKFGTAIHNTEGILDYIHSDVWGPTR 202

Query: 37  VASIGG 20
             S+GG
Sbjct: 203 ETSLGG 208


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score =  187 bits (476), Expect = 2e-52
 Identities = 93/191 (48%), Positives = 130/191 (68%), Gaps = 2/191 (1%)
 Frame = -1

Query: 568 DGGSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFS 389
           D G VLMGN++ C+I GIG+++I+  DG  +TL+ VR +PDLK+NL+SLG LE+ GCK+S
Sbjct: 311 DSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYS 370

Query: 388 GEAGNVIVSRDSKVL-KGERIRNLYRLVGSVIVGDVSAAAEKVEDD-TRLWHMRLGHMSE 215
            E G + VS+ + VL K  RI +LY L GS++ G  + ++   + D T+LWHMRLGHMSE
Sbjct: 371 AEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSE 430

Query: 214 KGLQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPAPV 35
           KG+ +L K+G+L      KL+FC+ CV G+Q +          KG LD IH+D+WGP+ V
Sbjct: 431 KGMHLLSKQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHRTKGTLDYIHSDLWGPSKV 490

Query: 34  ASIGGARYFVT 2
            S GG RY +T
Sbjct: 491 PSYGGCRYMMT 501


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  189 bits (479), Expect = 2e-52
 Identities = 97/193 (50%), Positives = 127/193 (65%), Gaps = 4/193 (2%)
 Frame = -1

Query: 568 DGGSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFS 389
           DGG V MGN++ C+ VGIGS+++RN DG  R L  VR+VP LKKNL+SLGALE++G   +
Sbjct: 248 DGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVT 307

Query: 388 GEAGNVIVSRDSKV-LKGERIRNLYRLVGSVIVGDVSAAAEKVEDDT---RLWHMRLGHM 221
              G +  +  + V LKG    NLY   GS +VG V+AA    + D    +LWHMRLGH 
Sbjct: 308 MRDGILKATLGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEAAKLWHMRLGHA 367

Query: 220 SEKGLQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPA 41
            EK LQ+L K+G+L G K+CKL+FC+ CV+G+Q +          KG+LD +H+DVWGPA
Sbjct: 368 GEKSLQILTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPA 427

Query: 40  PVASIGGARYFVT 2
              SIGG  YFVT
Sbjct: 428 KTPSIGGRHYFVT 440


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1032

 Score =  187 bits (476), Expect = 1e-51
 Identities = 93/191 (48%), Positives = 130/191 (68%), Gaps = 2/191 (1%)
 Frame = -1

Query: 568 DGGSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFS 389
           D G VLMGN++ C+I GIG+++I+  DG  +TL+ VR +PDLK+NL+SLG LE+ GCK+S
Sbjct: 15  DSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYS 74

Query: 388 GEAGNVIVSRDSKVL-KGERIRNLYRLVGSVIVGDVSAAAEKVEDD-TRLWHMRLGHMSE 215
            E G + VS+ + VL K  RI +LY L GS++ G  + ++   + D T+LWHMRLGHMSE
Sbjct: 75  AEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWHMRLGHMSE 134

Query: 214 KGLQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPAPV 35
           KG+ +L K+G+L      KL+FC+ CV G+Q +          KG LD IH+D+WGP+ V
Sbjct: 135 KGMHLLSKQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHRTKGTLDYIHSDLWGPSKV 194

Query: 34  ASIGGARYFVT 2
            S GG RY +T
Sbjct: 195 PSYGGCRYMMT 205


>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
          Length = 876

 Score =  183 bits (465), Expect = 3e-50
 Identities = 87/191 (45%), Positives = 126/191 (65%), Gaps = 4/191 (2%)
 Frame = -1

Query: 562 GSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFSGE 383
           G V +G++  C I GIG ++I   DG  RTLT VR++P+L+KNL+SLG L+  G  +  +
Sbjct: 235 GFVYLGDDKACAITGIGQIKIAMDDGGVRTLTNVRYIPELRKNLISLGTLQENGYSYRSD 294

Query: 382 AGNVIVSRDSKVLKGERIR----NLYRLVGSVIVGDVSAAAEKVEDDTRLWHMRLGHMSE 215
               I+      L   R++    N+Y+L+G+ +VGDV A+ E   D T+LWH+RLGH+SE
Sbjct: 295 RDRDILKVSKGALTVMRVKRTAGNIYKLLGNTVVGDV-ASVESDNDATKLWHLRLGHLSE 353

Query: 214 KGLQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPAPV 35
           +G+  LHKR +L GV SCK+D CK+CV+G+Q +          +G+LD +H+DVWGP   
Sbjct: 354 RGMMELHKRSLLKGVCSCKMDLCKYCVLGKQCRVRFKPMKHKTEGILDYVHSDVWGPTRE 413

Query: 34  ASIGGARYFVT 2
           AS+GG+RYFVT
Sbjct: 414 ASMGGSRYFVT 424


>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  181 bits (458), Expect = 4e-49
 Identities = 92/190 (48%), Positives = 128/190 (67%), Gaps = 3/190 (1%)
 Frame = -1

Query: 562  GSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFSGE 383
            GSVLMGN+  C+++GIG+VRI+  DG+ RTLT VRH+P++KKNL+SL  L+ +G ++S E
Sbjct: 834  GSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLDKKGFRYSAE 893

Query: 382  AGNV-IVSRDSKVLKGERIRNLYRLVGSVIVG--DVSAAAEKVEDDTRLWHMRLGHMSEK 212
             G + + S    V++G   R LY L GS + G   VS++ +   D T+LWHMRLGHMSE+
Sbjct: 894  GGVLKVFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSER 953

Query: 211  GLQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPAPVA 32
            GL VL KRG+L G  + KL+FC+ CV G+Q +          KG +D  H+D+WGP+P  
Sbjct: 954  GLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGTVDYFHSDLWGPSPTI 1013

Query: 31   SIGGARYFVT 2
            S GG RY +T
Sbjct: 1014 SKGGYRYLLT 1023


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  181 bits (458), Expect = 4e-49
 Identities = 92/190 (48%), Positives = 128/190 (67%), Gaps = 3/190 (1%)
 Frame = -1

Query: 562  GSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFSGE 383
            GSVLMGN+  C+++GIG+VRI+  DG+ RTLT VRH+P++KKNL+SL  L+ +G ++S E
Sbjct: 813  GSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLDKKGFRYSAE 872

Query: 382  AGNV-IVSRDSKVLKGERIRNLYRLVGSVIVG--DVSAAAEKVEDDTRLWHMRLGHMSEK 212
             G + + S    V++G   R LY L GS + G   VS++ +   D T+LWHMRLGHMSE+
Sbjct: 873  GGVLKVFSGALTVIRGNLERGLYFLDGSSVTGVAGVSSSDDLDSDTTKLWHMRLGHMSER 932

Query: 211  GLQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPAPVA 32
            GL VL KRG+L G  + KL+FC+ CV G+Q +          KG +D  H+D+WGP+P  
Sbjct: 933  GLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGTVDYFHSDLWGPSPTI 992

Query: 31   SIGGARYFVT 2
            S GG RY +T
Sbjct: 993  SKGGYRYLLT 1002


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  179 bits (454), Expect = 8e-49
 Identities = 92/186 (49%), Positives = 122/186 (65%), Gaps = 4/186 (2%)
 Frame = -1

Query: 568 DGGSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFS 389
           DGG V MGN++ C+ VGIGS+++RN DG  R L  VR+VP LKKNL+SLGALE++G   +
Sbjct: 249 DGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVT 308

Query: 388 GEAGNVIVSRDSKV-LKGERIRNLYRLVGSVIVGDVSAAAEKVEDD---TRLWHMRLGHM 221
              G +  +  + V LKG    NLY   GS +VG V+AA    + D   T+LWHMRLGH 
Sbjct: 309 MRDGILKATSGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEATKLWHMRLGHA 368

Query: 220 SEKGLQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPA 41
            EK LQ+  K+G+L G K+CKL+FC+ CV+G+Q +          KG+LD +H+DVWGPA
Sbjct: 369 GEKSLQIFTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKGILDYVHSDVWGPA 428

Query: 40  PVASIG 23
              SIG
Sbjct: 429 KTPSIG 434


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  179 bits (454), Expect = 1e-48
 Identities = 89/190 (46%), Positives = 122/190 (64%), Gaps = 1/190 (0%)
 Frame = -1

Query: 568 DGGSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFS 389
           DGG VL+GNN  C+I+G G+VRI++ DG+ER L  VR++P+LK+NL+SLG L+  G  F 
Sbjct: 285 DGGYVLLGNNKHCKILGTGTVRIKHYDGIERVLEDVRYIPELKRNLISLGMLDKSGYTFK 344

Query: 388 GEAGNVIVSRDS-KVLKGERIRNLYRLVGSVIVGDVSAAAEKVEDDTRLWHMRLGHMSEK 212
            E  ++ V+R S  V+KG     LY L+G  + G VS   ++    T+LWH RLGH+S +
Sbjct: 345 SEPNSLRVARGSLTVMKGTIKNGLYTLIGQTVTGKVSTVLKEDVGTTKLWHQRLGHISHR 404

Query: 211 GLQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPAPVA 32
           GLQ L K+GVL   K   L FC+ CV G+  +          +  LD IH+D+WGP+ V 
Sbjct: 405 GLQELEKQGVLGNYKLTDLPFCEHCVFGKATRVKFAKAIHETQNQLDYIHSDLWGPSRVP 464

Query: 31  SIGGARYFVT 2
           SIGGARYF+T
Sbjct: 465 SIGGARYFLT 474


>gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 448

 Score =  172 bits (435), Expect = 3e-48
 Identities = 90/191 (47%), Positives = 125/191 (65%), Gaps = 3/191 (1%)
 Frame = -1

Query: 565 GGSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFSG 386
           GG V MGN+  C+ VGIG++++R  DGV RTLT VRHVPDLKKNL+S+G L+++G K + 
Sbjct: 78  GGRVFMGNDMPCKTVGIGTIQLRMHDGVIRTLTEVRHVPDLKKNLISVGVLDSKGFKCNV 137

Query: 385 EAGNVIVSRDSKV-LKGERIRNLYRLVGSV--IVGDVSAAAEKVEDDTRLWHMRLGHMSE 215
           + G + + R S V ++G +  NLY L GS   I   VS A + + D T LWHMRLGHMSE
Sbjct: 138 KNGVMEIKRGSTVVMRGFKKGNLYMLQGSTSSISESVSVAEKNIPDLTYLWHMRLGHMSE 197

Query: 214 KGLQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPAPV 35
           +G+ +L ++ +L      +L FC+ CV G+QH+          K  LD IH+D WGP+ V
Sbjct: 198 RGMMILSRQQLLGNHTVKELRFCEHCVFGKQHRIKFPKAQHSTKSTLDYIHSDCWGPSQV 257

Query: 34  ASIGGARYFVT 2
            S+GG RYF++
Sbjct: 258 PSLGGGRYFLS 268


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  176 bits (446), Expect = 7e-48
 Identities = 92/194 (47%), Positives = 127/194 (65%), Gaps = 5/194 (2%)
 Frame = -1

Query: 568 DGGSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFS 389
           DGG V MGN++ C+ VGIGS+++RN DG  R L  VR+VP+LK++L+SLG LE++G +  
Sbjct: 333 DGGFVYMGNDNPCKTVGIGSIKLRNHDGSTRILKDVRYVPNLKRSLISLGLLESKGLEVR 392

Query: 388 GEAGNVIVSRDSKV-LKGERIRNLYRLVGSVIVGDV----SAAAEKVEDDTRLWHMRLGH 224
              G + V+  + + LKG R  NLY   GS +VG      S++++K  + T+LWHMRLG 
Sbjct: 393 MRDGILKVTSGALLMLKGVRKNNLYYYQGSTVVGTAAVATSSSSKKDAEATKLWHMRLGD 452

Query: 223 MSEKGLQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGP 44
             EK LQ L K+G+L G K CKL+FC+ CV+ +Q K          KG+LD +H+DVWGP
Sbjct: 453 AGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIHNTKGILDYVHSDVWGP 512

Query: 43  APVASIGGARYFVT 2
           A   S+GG  YFVT
Sbjct: 513 AKTPSLGGRYYFVT 526


>gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 609

 Score =  172 bits (437), Expect = 2e-47
 Identities = 90/191 (47%), Positives = 124/191 (64%), Gaps = 3/191 (1%)
 Frame = -1

Query: 565 GGSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFSG 386
           GG V MGN+  C+ +GIG+++I+  DGV RTLT VRHVPDLKKNL+S+G L  +G K + 
Sbjct: 239 GGDVFMGNDMACKTIGIGTIQIKMHDGVIRTLTEVRHVPDLKKNLISVGVLHTKGFKCNV 298

Query: 385 EAGNVIVSRDSKV-LKGERIRNLYRLVGS--VIVGDVSAAAEKVEDDTRLWHMRLGHMSE 215
           E G + +S+ S V ++G +  NLY L GS  +I   VS A +   D T LWHMRLGHMSE
Sbjct: 299 EGGVMEISKGSTVVIRGIKKGNLYMLQGSTNLISESVSVADKHTPDLTHLWHMRLGHMSE 358

Query: 214 KGLQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPAPV 35
           +G+ VL K+ +L      +L FC+ CV+G+ H+          K  LD +H+D WGP+ V
Sbjct: 359 RGMMVLRKQKLLGDHTVKELKFCEHCVVGKHHRIKFPKAQHTTKSTLDYVHSDCWGPSRV 418

Query: 34  ASIGGARYFVT 2
            S+GG RYF++
Sbjct: 419 PSLGGGRYFLS 429


>dbj|GAV69956.1| gag_pre-integrs domain-containing protein [Cephalotus follicularis]
          Length = 176

 Score =  161 bits (408), Expect = 3e-47
 Identities = 86/167 (51%), Positives = 116/167 (69%), Gaps = 4/167 (2%)
 Frame = -1

Query: 490 DGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEAGNVIVSRDSKVL-KGERIRNLYR 314
           DGV RTL    HVP LKKNL+SLG L++ GCKF+GE G + V R + V+ KG++I  LY+
Sbjct: 3   DGVIRTLEAW-HVPGLKKNLISLGVLDSHGCKFTGENGIIKVLRGALVIMKGKKIDGLYQ 61

Query: 313 LVGSVIVGDVSAAA---EKVEDDTRLWHMRLGHMSEKGLQVLHKRGVLPGVKSCKLDFCK 143
           L G+ ++G  + A+   +K  D TR WH+RLGHMSE+GLQ+L K+G+L GVKS KLDFC+
Sbjct: 62  LQGNAVLGTATVASSSRDKDADTTRFWHIRLGHMSERGLQILSKKGLLAGVKSGKLDFCE 121

Query: 142 FCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPAPVASIGGARYFVT 2
            CV G+Q +          KG LD IH+D+WGP+   S+GG+RY +T
Sbjct: 122 HCVYGKQCRVKFSTAIHKSKG-LDYIHSDLWGPSSQLSLGGSRYLMT 167


>dbj|GAV91597.1| gag_pre-integrs domain-containing protein [Cephalotus follicularis]
          Length = 177

 Score =  161 bits (407), Expect = 5e-47
 Identities = 86/166 (51%), Positives = 113/166 (68%), Gaps = 4/166 (2%)
 Frame = -1

Query: 490 DGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEAGNVIVSRDSKVL-KGERIRNLYR 314
           DG  RTL    HVP LKKNL+SLG L++ GCK +GE G + V R + V+ KGE+I  LY+
Sbjct: 3   DGAIRTLEAW-HVPGLKKNLISLGVLDSHGCKCTGENGIIKVLRGALVIMKGEKIDGLYQ 61

Query: 313 LVGSVIVGDVSAAA---EKVEDDTRLWHMRLGHMSEKGLQVLHKRGVLPGVKSCKLDFCK 143
           L G+ I+G  + A+   +K  D TRLWHMRLGHMSE+GLQ+L K G+L GVKS KLDF +
Sbjct: 62  LYGNTILGTAAVASSSGDKDADTTRLWHMRLGHMSERGLQILSKMGLLAGVKSGKLDFYE 121

Query: 142 FCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPAPVASIGGARYFV 5
            CV G+Q +          KG+LD IH+D+WGP+   S+GG+RY +
Sbjct: 122 HCVYGKQCRVKFSTVIHKTKGILDYIHSDLWGPSSQVSLGGSRYLM 167


>gb|AAC12735.1| putative retrovirus-related polyprotein, partial [Lithospermum
           erythrorhizon]
          Length = 244

 Score =  162 bits (411), Expect = 9e-47
 Identities = 84/188 (44%), Positives = 117/188 (62%), Gaps = 4/188 (2%)
 Frame = -1

Query: 553 LMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFSGEAGN 374
           LMGN+  C+ VG+G++R++  DG   TL  VRH+ DL KNL+SL  LE  GCK   E G 
Sbjct: 4   LMGNDHACKTVGVGTIRVKMHDGTIITLNDVRHIQDLHKNLISLRLLEKNGCKIVLEDGV 63

Query: 373 V-IVSRDSKVLKGERIRNLYRLVGSVIVGDVSAAAEKVEDDTR---LWHMRLGHMSEKGL 206
           + +V R   V+KG    NLY LVG+++ GD++      +D T    +WHMRLGHMSEKGL
Sbjct: 64  LKVVRRSLVVMKGVSHGNLYPLVGTMVTGDLAVGVVGHKDQTECTMIWHMRLGHMSEKGL 123

Query: 205 QVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPAPVASI 26
            +L  +G+L  +K   ++FC+  V G+ H+          +G+LD +HTD+WGPA V S 
Sbjct: 124 SLLSGQGLLKNMKKSCMEFCEHWVYGKTHRLKFFTSKHKSRGLLDYVHTDLWGPAKVNSK 183

Query: 25  GGARYFVT 2
            G+ YFVT
Sbjct: 184 DGSWYFVT 191


>gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 593

 Score =  169 bits (429), Expect = 3e-46
 Identities = 87/191 (45%), Positives = 126/191 (65%), Gaps = 3/191 (1%)
 Frame = -1

Query: 565 GGSVLMGNNSVCRIVGIGSVRIRNQDGVERTLTGVRHVPDLKKNLLSLGALEAQGCKFSG 386
           GG V MGN+  C+ + IG+++I+  DGV RTLT VRHVPDLKKNL+S+G L+ +G K + 
Sbjct: 291 GGDVFMGNDMACKTISIGTIQIKMHDGVIRTLTEVRHVPDLKKNLISVGVLDTKGFKCNV 350

Query: 385 EAGNVIVSRDSK-VLKGERIRNLYRLVGS--VIVGDVSAAAEKVEDDTRLWHMRLGHMSE 215
           E G + +++ S  V++G +  NLY L GS  +I   +S A +   D TRLWHMRLGHMSE
Sbjct: 351 EGGVMEINKGSTIVIRGIKKGNLYMLQGSTNLISESISVADKHTLDLTRLWHMRLGHMSE 410

Query: 214 KGLQVLHKRGVLPGVKSCKLDFCKFCVMGRQHKTXXXXXXXXXKGVLDLIHTDVWGPAPV 35
           +G+ VL K+ +L      +L FC+ CV+G+ H++         K  LD +H++ WGP+ V
Sbjct: 411 RGMMVLSKQKLLRDHTVKELKFCEHCVLGKHHRSKFPKAQHTTKSTLDYVHSNCWGPSRV 470

Query: 34  ASIGGARYFVT 2
            S+GG RYF++
Sbjct: 471 PSLGGGRYFLS 481