BLASTX nr result

ID: Ophiopogon22_contig00010562 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00010562
         (558 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020243632.1| postreplication repair E3 ubiquitin-protein ...   137   3e-35
ref|XP_010933375.1| PREDICTED: uncharacterized protein LOC105053...    57   3e-06

>ref|XP_020243632.1| postreplication repair E3 ubiquitin-protein ligase RAD18-like
           [Asparagus officinalis]
 gb|ONK79953.1| uncharacterized protein A4U43_C01F12180 [Asparagus officinalis]
          Length = 398

 Score =  137 bits (344), Expect = 3e-35
 Identities = 92/191 (48%), Positives = 101/191 (52%), Gaps = 6/191 (3%)
 Frame = +3

Query: 3   YDLALNALPLDFGDDDVFMRXXXXXXXXXXXXXXXX-ENLFEPFDLPSYG-YIPPIPVPS 176
           YDLAL+AL      DDVF                   ENLFEPFDLP Y   IPP     
Sbjct: 22  YDLALDAL------DDVFTSIPSIDDPLHPFDEMSDPENLFEPFDLPPYNDEIPP----- 70

Query: 177 EDRRNNALNSVPYSASLTFDNEPLARTGGXXXXXXXXXXXXIRFQRLIESRDRWEM---X 347
                NALNS+PYS SL FDNEPLARTG             +RF RL ESR+R EM    
Sbjct: 71  ----QNALNSIPYSPSLMFDNEPLARTGEPRLHQDLLQCPELRFHRLFESRERLEMARTR 126

Query: 348 XXXXXXXXXXXXXXXXPERLMRDIRRSGRLVGSIGKHKAADMAQLAGGSAEEK-NEKSGC 524
                           PERLMRDIRRSGR +GSIGKHKAAD A     S+EEK  EK+  
Sbjct: 127 SNQDGSNQSNEPLSTDPERLMRDIRRSGRFLGSIGKHKAADKAPKTEDSSEEKTKEKNDT 186

Query: 525 VTDFDCNICLE 557
            ++F CNICLE
Sbjct: 187 ASEFGCNICLE 197


>ref|XP_010933375.1| PREDICTED: uncharacterized protein LOC105053788 [Elaeis guineensis]
          Length = 634

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 44/148 (29%), Positives = 59/148 (39%), Gaps = 6/148 (4%)
 Frame = +3

Query: 132 DLPSYGYIPPIPVPSEDRRNNALNSVPYSASLTFDNEPLARTGGXXXXXXXXXXXXIRFQ 311
           D  ++G++PPIP+ +                     E L R GG            IRF+
Sbjct: 197 DEGTFGFLPPIPLQT--------------------GELLGRQGGSSSQHDFIRSPEIRFR 236

Query: 312 RLIESRDRW------EMXXXXXXXXXXXXXXXXXPERLMRDIRRSGRLVGSIGKHKAADM 473
           RLIES  RW                         PE+L+ D   S R   S GK+K +  
Sbjct: 237 RLIESTHRWPTRRFRSSLPYVGERSNFGSPSSPSPEQLIHDTVNSQRSSESSGKNKVSAE 296

Query: 474 AQLAGGSAEEKNEKSGCVTDFDCNICLE 557
             +A  S EE  EKS    +F+CNICL+
Sbjct: 297 DIVAEASEEETEEKSRNAANFECNICLD 324


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