BLASTX nr result

ID: Ophiopogon22_contig00010561 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00010561
         (657 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020243632.1| postreplication repair E3 ubiquitin-protein ...   155   1e-41
ref|XP_017697756.1| PREDICTED: E3 ubiquitin-protein ligase RNF8-...    65   1e-08
ref|XP_020242476.1| putative E3 ubiquitin-protein ligase RING1a ...    60   4e-07
ref|XP_010933375.1| PREDICTED: uncharacterized protein LOC105053...    59   1e-06
ref|XP_008798015.1| PREDICTED: uncharacterized protein LOC103713...    58   3e-06
ref|XP_009392920.1| PREDICTED: uncharacterized protein LOC103978...    57   7e-06

>ref|XP_020243632.1| postreplication repair E3 ubiquitin-protein ligase RAD18-like
           [Asparagus officinalis]
 gb|ONK79953.1| uncharacterized protein A4U43_C01F12180 [Asparagus officinalis]
          Length = 398

 Score =  155 bits (391), Expect = 1e-41
 Identities = 96/195 (49%), Positives = 112/195 (57%), Gaps = 5/195 (2%)
 Frame = +3

Query: 87  SVDLGYDLALNALPFDIEDDDVFMRXXXXXXXXXXXXXXXXX-NLFEPFDLPSYTDISPT 263
           SVDLGYDLAL+AL      DDVF                    NLFEPFDLP Y D  P 
Sbjct: 17  SVDLGYDLALDAL------DDVFTSIPSIDDPLHPFDEMSDPENLFEPFDLPPYNDEIPP 70

Query: 264 PIPSEDRRNSASNSVPHSASLIFDNEPLAQIGGPRLRRELLECPEFRFRRLIESRDRWEM 443
                    +A NS+P+S SL+FDNEPLA+ G PRL ++LL+CPE RF RL ESR+R EM
Sbjct: 71  --------QNALNSIPYSPSLMFDNEPLARTGEPRLHQDLLQCPELRFHRLFESRERLEM 122

Query: 444 ---XXXXXXXXXXXXXXXXXPEMLMRDIRRSGRLVGSIGKHK-ADKALLAEGSAAEEKNE 611
                               PE LMRDIRRSGR +GSIGKHK ADKA   E S+ E+  E
Sbjct: 123 ARTRSNQDGSNQSNEPLSTDPERLMRDIRRSGRFLGSIGKHKAADKAPKTEDSSEEKTKE 182

Query: 612 KSGGVTDFDCNICLE 656
           K+   ++F CNICLE
Sbjct: 183 KNDTASEFGCNICLE 197


>ref|XP_017697756.1| PREDICTED: E3 ubiquitin-protein ligase RNF8-B-like [Phoenix
           dactylifera]
          Length = 564

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 51/131 (38%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
 Frame = +3

Query: 282 RRNSASNSV-PHSASLIFDNEPLAQIGGPRLRRELLECPEFRFRRLIES--RDRWEMXXX 452
           R+N A+ S+ P+  + +   E +AQ  G   RRELLECPEFRF+RLIES  R R      
Sbjct: 146 RQNEAAGSISPYLTARM--GELVAQDDG---RRELLECPEFRFQRLIESNNRSRGRRFRL 200

Query: 453 XXXXXXXXXXXXXXPEMLMRDIRRSGRLVGSIGKHKADKALLAEGSAAEEKNEK---SGG 623
                         P+ LM DI  S R + +  K K    L A+G A EE +EK      
Sbjct: 201 TSTFDSERSDLQTSPDQLMHDIMHSQRTLEASKKDK----LHAQGKAMEEDSEKEKVDEN 256

Query: 624 VTDFDCNICLE 656
             +F+CNIC E
Sbjct: 257 AANFECNICFE 267


>ref|XP_020242476.1| putative E3 ubiquitin-protein ligase RING1a [Asparagus officinalis]
 ref|XP_020242477.1| putative E3 ubiquitin-protein ligase RING1a [Asparagus officinalis]
 ref|XP_020242478.1| putative E3 ubiquitin-protein ligase RING1a [Asparagus officinalis]
 ref|XP_020242479.1| putative E3 ubiquitin-protein ligase RING1a [Asparagus officinalis]
 ref|XP_020242480.1| putative E3 ubiquitin-protein ligase RING1a [Asparagus officinalis]
 gb|ONK58927.1| uncharacterized protein A4U43_C08F1170 [Asparagus officinalis]
          Length = 415

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 66/212 (31%), Positives = 87/212 (41%), Gaps = 23/212 (10%)
 Frame = +3

Query: 90  VDLGYDLALNALPFDIED-DDVFMRXXXXXXXXXXXXXXXXXNLFEPFDLPSYTDISPTP 266
           +D G+DL+LN LPF     +DV M+                        LPS   + P  
Sbjct: 9   IDFGHDLSLNDLPFSSSGINDVLMQ------------------------LPSPDALLPL- 43

Query: 267 IPSEDRRNSASNSVPHSASLIFDNEPLAQIGGPRLRRELLECPE--FRFRRLIESRDRWE 440
                      + +P S+     ++P  Q GGP LR+ LLE PE   R RRLIESR R E
Sbjct: 44  -----------DEIPDSS-----DQPREQTGGPTLRQRLLEHPEVRVRIRRLIESRQRLE 87

Query: 441 M-------------------XXXXXXXXXXXXXXXXXPEMLMRDIRRSGRLVGSIGKHK- 560
           +                                    PE LM DI+ S      I  HK 
Sbjct: 88  ITRTHRLDDDNDGGGGGGAGDDDDDDDAGPRPDPATDPERLMHDIKTS-----VIRMHKF 142

Query: 561 ADKALLAEGSAAEEKNEKSGGVTDFDCNICLE 656
           +D+A+  E S+AE KN+     ++FDCNICLE
Sbjct: 143 SDRAIQTE-SSAEVKND---AASEFDCNICLE 170


>ref|XP_010933375.1| PREDICTED: uncharacterized protein LOC105053788 [Elaeis guineensis]
          Length = 634

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
 Frame = +3

Query: 339 EPLAQIGGPRLRRELLECPEFRFRRLIESRDRW------EMXXXXXXXXXXXXXXXXXPE 500
           E L + GG   + + +  PE RFRRLIES  RW                         PE
Sbjct: 213 ELLGRQGGSSSQHDFIRSPEIRFRRLIESTHRWPTRRFRSSLPYVGERSNFGSPSSPSPE 272

Query: 501 MLMRDIRRSGRLVGSIGKHKADKALLAEGSAAEEKNEKSGGVTDFDCNICLE 656
            L+ D   S R   S GK+K     +   ++ EE  EKS    +F+CNICL+
Sbjct: 273 QLIHDTVNSQRSSESSGKNKVSAEDIVAEASEEETEEKSRNAANFECNICLD 324


>ref|XP_008798015.1| PREDICTED: uncharacterized protein LOC103713033 [Phoenix
           dactylifera]
          Length = 635

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 38/112 (33%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
 Frame = +3

Query: 339 EPLAQIGGPRLRRELLECPEFRFRRLIESRDRW------EMXXXXXXXXXXXXXXXXXPE 500
           E L +  G   +++ L  PEFRFRRLIES  RW                         PE
Sbjct: 213 ELLGRGDGSSSQQDFLRSPEFRFRRLIESSHRWPTRRFRSSLPYAGERSNFGSPSSPSPE 272

Query: 501 MLMRDIRRSGRLVGSIGKHKADKALLAEGSAAEEKNEKSGGVTDFDCNICLE 656
            L+ D   S R   S GK K     +   ++ EE  EKS    +F+CNICL+
Sbjct: 273 QLIHDTVNSQRSSESSGKLKVSAEGIVAEASEEETEEKSRNAANFECNICLD 324


>ref|XP_009392920.1| PREDICTED: uncharacterized protein LOC103978739 [Musa acuminata
           subsp. malaccensis]
          Length = 600

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 36/105 (34%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
 Frame = +3

Query: 360 GPRLRRELLECPEFRFRRLIESRDRW------EMXXXXXXXXXXXXXXXXXPEMLMRDIR 521
           G   R E L CPE+RFRRLIES  RW                         PE  + D+ 
Sbjct: 192 GSSSRPERLRCPEYRFRRLIESSHRWPNRRFRSSLPPAGERFRFGSPSLPNPEQSVHDVL 251

Query: 522 RSGRLVGSIGKHKADKALLAEGSAAEEKNEKSGGVTDFDCNICLE 656
            S R     GKHK      A  ++ EE  EK     +F+CNIC +
Sbjct: 252 DSQRPPECNGKHKVIAEDNAAETSGEEMEEKGRSAANFECNICFD 296


Top