BLASTX nr result

ID: Ophiopogon22_contig00010377 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00010377
         (2081 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020269278.1| histone deacetylase 2 isoform X1 [Asparagus ...    62   2e-06

>ref|XP_020269278.1| histone deacetylase 2 isoform X1 [Asparagus officinalis]
 gb|ONK66694.1| uncharacterized protein A4U43_C06F11000 [Asparagus officinalis]
          Length = 356

 Score = 61.6 bits (148), Expect = 2e-06
 Identities = 39/68 (57%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
 Frame = -1

Query: 917 IRNEKVFRFAREKDASLLMLTSG--ILITFRLIIKKLLSFCLYIH*FADSISNLSKKRLL 744
           IR+EKVFRFAREKD  LLMLTSG  +  + R+I              ADSI+NLSKKRL+
Sbjct: 302 IRDEKVFRFAREKDIPLLMLTSGGYMKTSARVI--------------ADSITNLSKKRLI 347

Query: 743 DLESLQSR 720
           D+E LQSR
Sbjct: 348 DMEVLQSR 355


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