BLASTX nr result
ID: Ophiopogon22_contig00010344
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00010344
(2173 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 133 1e-45
ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage fact... 140 2e-45
ref|XP_009399217.1| PREDICTED: polyadenylation and cleavage fact... 120 1e-42
ref|XP_020103161.1| polyadenylation and cleavage factor homolog ... 134 8e-41
gb|OAY74981.1| Polyadenylation and cleavage factor [Ananas comosus] 134 8e-41
gb|PKA62212.1| hypothetical protein AXF42_Ash015097 [Apostasia s... 134 4e-40
gb|PKA50132.1| hypothetical protein AXF42_Ash020372 [Apostasia s... 131 5e-38
ref|XP_009399215.1| PREDICTED: polyadenylation and cleavage fact... 120 1e-37
ref|XP_021887348.1| polyadenylation and cleavage factor homolog ... 132 2e-36
ref|XP_021887349.1| polyadenylation and cleavage factor homolog ... 132 7e-36
ref|XP_020592403.1| uncharacterized protein LOC110032952 isoform... 124 3e-34
ref|XP_002518518.1| PREDICTED: polyadenylation and cleavage fact... 124 4e-34
ref|XP_007143212.1| hypothetical protein PHAVU_007G053400g [Phas... 128 1e-33
gb|PIN12436.1| mRNA cleavage and polyadenylation factor I/II com... 140 3e-33
ref|XP_011653861.1| PREDICTED: polyadenylation and cleavage fact... 122 4e-33
ref|XP_014524182.1| polyadenylation and cleavage factor homolog ... 128 2e-32
ref|XP_020674645.1| polyadenylation and cleavage factor homolog ... 127 2e-32
ref|XP_020674647.1| polyadenylation and cleavage factor homolog ... 127 2e-32
ref|XP_022158856.1| polyadenylation and cleavage factor homolog ... 124 6e-32
ref|XP_020417206.1| polyadenylation and cleavage factor homolog ... 135 7e-32
>ref|XP_010931817.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylation and cleavage factor
homolog 4 [Elaeis guineensis]
Length = 1070
Score = 133 bits (335), Expect(2) = 1e-45
Identities = 76/176 (43%), Positives = 102/176 (57%), Gaps = 11/176 (6%)
Frame = -2
Query: 2142 PNPNPMKRDREK-FEARPALRDRFDAKVEEMKQR----------GPVGTPEITSLFGDFL 1996
P P P+ + + P + DRF A + E + P EI L+ + L
Sbjct: 22 PRPAPVAEPQPPPGRSLPTILDRFRAMLRERDEELREAIGEDPPPPPTAGEIVRLYEELL 81
Query: 1995 LELTRNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGD 1816
ELT NSKP+I ELT IA ++ +GIA+AI R++EVP++QKLPS YLLDSI+KN+G
Sbjct: 82 SELTFNSKPIITELTIIAGQHPQLAEGIADAICARVLEVPLDQKLPSLYLLDSIVKNIGR 141
Query: 1815 QYRLYFAGRLDTIFIDTYRKLSPSLCPAMVHLFKTWGKSIPSAARDKIEDFLQKEP 1648
+Y YFA RL +F + Y ++ PS PAM HLF TW + P + KIED LQ P
Sbjct: 142 EYVRYFAARLPKVFCEAYNQVHPSQYPAMRHLFGTWSQVFPLSVLRKIEDELQFSP 197
Score = 81.3 bits (199), Expect(2) = 1e-45
Identities = 104/429 (24%), Positives = 162/429 (37%), Gaps = 131/429 (30%)
Frame = -3
Query: 1655 KNHSPASSGDVRYSGSHSPHLLRG-HANAKYLEAHHQMEHSAA----------------- 1530
KN + +R S S SP G H N KYLEA H +HS
Sbjct: 199 KNSQSSGITSMRQSESPSPRPSHGIHVNPKYLEARHLFKHSTTMRAVESHDKAHMTDFDG 258
Query: 1529 ----------------------DAQQTR-LPPSLLSYGHKSSVRCGEYDHEDHELLPPHL 1419
D + R + SL YG KSS++C EYD + E+LP
Sbjct: 259 EQMEGNASEGLKGWSGGSPKFHDIEHARGVSSSLQVYGQKSSLQCNEYDIDHPEVLPSRR 318
Query: 1418 GFERVGT--SAIAGVNDVLPLPRPSSHPRT-----------------GPKLNSFSETVAD 1296
G R G+ +A ++ + P+ H ++ P + FS +
Sbjct: 319 GIVRTGSPLTAATRATSIVEVEGPTRHSKSKFSRFSPPPIIGPRKSVSPPTDRFSRRTSP 378
Query: 1295 R-------PSLCGFGSEWPSSCNIELTRGWP--DGEQNTETSWAYNRKNECDKLHARLLK 1143
R PS G ++ N R WP D + ++S A++ + K H+R L
Sbjct: 379 RRVLKRTSPSHSEAGR--GTNQNGRFERSWPCDDATEQVKSSMAFSLNSGYAKQHSRDLI 436
Query: 1142 DSYGS--------SDMPMKESL----------------SSEEEFVWEKMSPTFPRKEYNS 1035
D+YG+ +P + L S EEE+VWE MSPT +
Sbjct: 437 DAYGNCRGKSTSLEKLPKVQRLDVNGIASEAATRKWKNSEEEEYVWEDMSPTLSDRSRRK 496
Query: 1034 TL--FGHNT-------DLPRSNASYLGNDFGSNQYNQSADI--IANPGCR---------- 918
+ G +T L R +AS L +DFG + + A + I +P
Sbjct: 497 SQPPLGPSTGNLSIRGGLTRPDASLLEHDFGRHSWPGQAQLPAIDDPAYTVEDRIHFFGN 556
Query: 917 ---ASSDKFEDYVVSHEESMLRSQNSYHCQETLK------------LSNEAQGRSA--PL 789
+ + K+ D +V+ + + SQ S+H E K LS +GR++ P+
Sbjct: 557 AHGSMNRKYLDGIVNQHKLLADSQGSHHTHEPRKLPYMFPQSSQQSLSPRLRGRASQMPV 616
Query: 788 AATPVSPRL 762
AA+ ++P +
Sbjct: 617 AASGITPSI 625
Score = 108 bits (269), Expect = 2e-20
Identities = 56/109 (51%), Positives = 74/109 (67%), Gaps = 2/109 (1%)
Frame = -3
Query: 323 PVPHGTNTGISESPASAFPGLLSSLLAQGFLSC-PSNLSQDTL-IDFNAGLPKVRHESSI 150
PV + +S SPASAF GL+SSL+AQG +S P SQD + ++FNA L KVR ES+I
Sbjct: 854 PVSQNAGSVVSSSPASAFSGLISSLMAQGLISLNPPAPSQDCVGVEFNAELLKVRRESAI 913
Query: 149 NALYDNLSMQCRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
NALY +L QC TCG+R+ QEE HMDWH+T +R+++ + Q S W
Sbjct: 914 NALYTDLPRQCTTCGLRFKRQEEHSSHMDWHVTKNRISKYRKQKPSRRW 962
>ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Nelumbo nucifera]
Length = 1071
Score = 140 bits (354), Expect(2) = 2e-45
Identities = 78/155 (50%), Positives = 99/155 (63%)
Frame = -2
Query: 2112 EKFEARPALRDRFDAKVEEMKQRGPVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKY 1933
EKF A R+ + +V + P T EI L+ L ELT NSKP+I ELT IA +
Sbjct: 51 EKFRALLKEREE-EMRVSDDDDVPPPSTEEIVRLYEVVLSELTFNSKPIITELTIIAGEQ 109
Query: 1932 KDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYRKL 1753
++H +GIA+AI RI+EVPVEQKLPS YLLDSI+KN+G +Y YFA RL +F + YR++
Sbjct: 110 REHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYARYFASRLPEVFCEAYRQV 169
Query: 1752 SPSLCPAMVHLFKTWGKSIPSAARDKIEDFLQKEP 1648
P+L PAM HLF TW P+ KIE LQ P
Sbjct: 170 QPNLYPAMRHLFGTWSTVFPTKVLRKIEVELQFSP 204
Score = 73.2 bits (178), Expect(2) = 2e-45
Identities = 88/324 (27%), Positives = 122/324 (37%), Gaps = 65/324 (20%)
Frame = -3
Query: 1583 HANAKYLEAHHQMEHS--AADAQQTRLPPSLLS-YGHKSSVRCGEYDHEDHELLPPHLGF 1413
H N KYLE Q+EHS A D QQ R S L YG K + E+D + E + PH G
Sbjct: 232 HVNPKYLE-RRQIEHSSFANDIQQGRGSSSSLQIYGRKPASGYVEFDLDHDEGISPHFGV 290
Query: 1412 E-------RVGTSAIAGVNDVLP----LPRPSSHPRTGPK----------LNSFSETVAD 1296
+ + S++ +LP L R SS R G + +N+ V +
Sbjct: 291 QGLDSQGAAIRASSVGAAERLLPTKARLARSSSPARIGARSLPPTNDGFAINNSPRRVVE 350
Query: 1295 RPSLCGFGSEWPSSCNIELTRGWPDGE--------QNTETSWAYNRKNECDKLHARLLKD 1140
S GSE+ + T G DGE Q ETS YN N CD+ R L D
Sbjct: 351 GASPSHSGSEYGPG---KATDG--DGEKSEWWFKCQQMETSGTYNPSNGCDQQRPRALID 405
Query: 1139 SYG------------------------SSDMPMKESLSSEEEFVWEKMSPTFPRKEYNST 1032
+YG S ++ + + EEE+VWE MSPT + +
Sbjct: 406 AYGNYRGKNTLNGKPLKVERLDINGINSKEVSKRWQNTEEEEYVWEDMSPTLTDRSRGND 465
Query: 1031 LFGHN---------TDLPRSNASYLGNDFGSNQYNQSADIIANPGCRASSDKFEDYVVSH 879
L N T L R + + L +DF + + S + S
Sbjct: 466 LMPFNPPLGSLSRRTGLERPSTAILESDFRRGNWPNQVQLSTMDDAAFISGDGVSILGSG 525
Query: 878 EESMLRSQNSYHCQETLKLSNEAQ 807
+M NS C +T S+ Q
Sbjct: 526 HVTM--GNNSLRCPQTQNESSHVQ 547
Score = 97.8 bits (242), Expect = 4e-17
Identities = 47/97 (48%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Frame = -3
Query: 287 SPASAFPGLLSSLLAQGFLSC--PSNLSQDTLIDFNAGLPKVRHESSINALYDNLSMQCR 114
S SAF GL+SSL+AQG +S P+++ ++FN L KVRHES+I ALY +L QC
Sbjct: 848 SSGSAFSGLISSLMAQGLISLTTPASVQDSIGVEFNLDLLKVRHESAIKALYADLPRQCT 907
Query: 113 TCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
TCG+R+ QEE HMDWH+T +R+++++ Q S W
Sbjct: 908 TCGLRFKCQEEHSSHMDWHVTKNRISKSRKQKPSRKW 944
>ref|XP_009399217.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 1000
Score = 120 bits (300), Expect(2) = 1e-42
Identities = 67/161 (41%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Frame = -2
Query: 2100 ARPALRDRFDAKVEEMKQR----------GPVGTPEITSLFGDFLLELTRNSKPLIMELT 1951
A P++ RF A + E ++ P+ ++ + D L ELT NSKP+I ELT
Sbjct: 26 AAPSIMVRFHAMLREREEELKEATGEDPPPPLTADDVVRCYEDVLAELTFNSKPIISELT 85
Query: 1950 AIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 1771
IA + IA+AI R++EVPV+QKLPS YL+DSI+KN+G +Y A RL +F
Sbjct: 86 MIAGHQVRYAKEIADAICARVLEVPVDQKLPSLYLIDSIVKNIGHEYVKILATRLPKVFC 145
Query: 1770 DTYRKLSPSLCPAMVHLFKTWGKSIPSAARDKIEDFLQKEP 1648
+ Y ++ PS M HLFKTW + P + KIED LQ P
Sbjct: 146 EAYNQVHPSQYSPMRHLFKTWSQVFPLSVLQKIEDELQFSP 186
Score = 84.7 bits (208), Expect(2) = 1e-42
Identities = 88/306 (28%), Positives = 112/306 (36%), Gaps = 65/306 (21%)
Frame = -3
Query: 1655 KNHSPASSGDVRYSGSHSPHLLRG-HANAKYLEAHHQMEHSAADAQQTRLPPS-LLSYGH 1482
+N P+ R S S SP G H N KYLEA Q E S+ R+ L +YG
Sbjct: 188 ENERPSGIASTRPSKSTSPCPSHGIHVNPKYLEARRQFEQSSVSMPHARVSSGGLQAYGQ 247
Query: 1481 KSSVRCGEYDHEDHELLPPHLGFERVGT--------SAIAGVNDVLP------------- 1365
K S + EYD + ELLP L R G+ S++ +P
Sbjct: 248 KPSAQYSEYDLDQPELLPQRLAVAREGSPQTAMLRPSSMIDARGSVPYLKNKISVPLSPR 307
Query: 1364 ---LPRPSSHPRTGPKLNSFSETVADRPSLCGFGSEWP----SSCNIELTRGWPDGE--Q 1212
L RP S P + + R S FGS + S N L R WP E Q
Sbjct: 308 RIGLKRPVSPPIVRSHNGTSPRKIGGRASTSHFGSGFEPGRLSDPNGWLGRSWPSNEDPQ 367
Query: 1211 NTETSWAYNRKNECDKLHARLLKDSYG------------------------SSDMPMKES 1104
+ E S Y N K H R L D+YG S K
Sbjct: 368 HVEASTLYKLNNGSGKQHPRDLIDAYGNPRGRVSSYEKFSKVQRLDVNGIASEAAARKWK 427
Query: 1103 LSSEEEFVWEKMSPT---------FPRKEYNSTLFGHNTDLPRSNASYLGNDFGSNQYNQ 951
S EEE+ WE MSPT PR ++ G T R + + L +DFG +
Sbjct: 428 NSDEEEYDWEDMSPTLSDRSRRNSLPRVGPSAGSLGIRTGFSRPDPAVLESDFGRRSWPG 487
Query: 950 SADIIA 933
A + A
Sbjct: 488 QAQLHA 493
Score = 105 bits (261), Expect = 2e-19
Identities = 54/103 (52%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
Frame = -3
Query: 305 NTGISESPASAFPGLLSSLLAQGFLSCPSNLS-QDTL-IDFNAGLPKVRHESSINALYDN 132
++ +S S SAF GL+SSL+AQG +S S QD+L ++FN L KVRHES+INALY +
Sbjct: 790 SSAVSGSSTSAFSGLISSLMAQGLISLKSPPQPQDSLGVEFNLDLLKVRHESAINALYAD 849
Query: 131 LSMQCRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
L QC TCG+R+ QEE HMDWH+T +R++RN+ Q S W
Sbjct: 850 LPRQCTTCGLRFKCQEEHSSHMDWHVTKNRISRNRKQKPSRKW 892
>ref|XP_020103161.1| polyadenylation and cleavage factor homolog 4-like [Ananas comosus]
Length = 999
Score = 134 bits (338), Expect(2) = 8e-41
Identities = 75/171 (43%), Positives = 104/171 (60%)
Frame = -2
Query: 2160 ATSNSNPNPNPMKRDREKFEARPALRDRFDAKVEEMKQRGPVGTPEITSLFGDFLLELTR 1981
A +++ P+P + E+F A R+ ++V + P E+ ++ + L ELT
Sbjct: 35 AAADARPSPPIL----ERFRAMIREREEEMSEVLDGDPPPPPTAAEVVRMYEEVLAELTF 90
Query: 1980 NSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLY 1801
NSKP+I ELT IA ++ GIANAI RI+EVP++QKLPS YLLDSI+KN+G Y +
Sbjct: 91 NSKPIITELTIIAGQHIQFAQGIANAICARILEVPMDQKLPSLYLLDSIVKNIGQDYVRH 150
Query: 1800 FAGRLDTIFIDTYRKLSPSLCPAMVHLFKTWGKSIPSAARDKIEDFLQKEP 1648
FA RL +F + Y ++ PSL AM HLF TW + PS+ KIED LQ P
Sbjct: 151 FASRLPKVFCEAYNQVHPSLYSAMRHLFGTWSQVFPSSVLRKIEDALQFSP 201
Score = 63.9 bits (154), Expect(2) = 8e-41
Identities = 97/369 (26%), Positives = 129/369 (34%), Gaps = 75/369 (20%)
Frame = -3
Query: 1658 KKNHSPASSGDVRYSGSHSPHLLRG-HANAKYLEAHHQMEHSAADAQQTRLPPSLLSYGH 1482
++N ++R S S SP G H N KYLEA +Q + S D Q R G
Sbjct: 202 RENQRSLGIANLRQSESPSPRPSHGIHVNPKYLEARNQFKSSTMDIQHIR--------GV 253
Query: 1481 KSSVRCGEYDHEDHELLPPHLGFERVGTSAIAGVNDVLP---------LPRPSSHPRTGP 1329
S EYDH LPP + VG+ + L +P+ S R G
Sbjct: 254 SSKSGDLEYDHSGS--LPPRVPMAGVGSPGYTATHTNLEGSLLHSRSNIPKVLSPSRIGM 311
Query: 1328 KLN-----------SFSETVADRPSLCGFGSEWPSSCNIELTRGWPDG-----EQNTETS 1197
+ + S V +RPS PS RG E +E S
Sbjct: 312 RRSRSPPGDLYPPVSPPRRVIERPS--------PSRTGFGYGRGRVADQNGIFEMPSEAS 363
Query: 1196 WAYNRKNECDKLHARLLKDSYGS-----SDMPMKESL----------------SSEEEFV 1080
AY N K +AR L D+YG+ +P + L S EEE+V
Sbjct: 364 KAYKLNNGFGKQNARELIDAYGNYRGKDEKLPKLQRLDTNGNVGEATAIKWKTSDEEEYV 423
Query: 1079 WEKMSPTFPRKEYNSTL---------FGHNTDLPRSNASYLGNDF------GSNQYNQSA 945
WE MSPT + ++L R NA + DF G Q
Sbjct: 424 WEDMSPTLADRSRRNSLPPIGPSSGMLSSGPGFSRPNAGIMNTDFVRHSWPGQGQLAAID 483
Query: 944 DIIANPGCRAS--------SDKFEDYVVSHEESMLRSQ-NSYHCQETLKLSN----EAQG 804
D + N R + K+ H ES Q +SYH QE KL + +Q
Sbjct: 484 DPVLNVEDRLPVAGSGHEVNKKYPQSARHHNESFSYYQSSSYHSQEPSKLPHMLRPTSQQ 543
Query: 803 RSAPLAATP 777
PL+ P
Sbjct: 544 SLDPLSRVP 552
Score = 107 bits (267), Expect = 4e-20
Identities = 55/100 (55%), Positives = 71/100 (71%), Gaps = 2/100 (2%)
Frame = -3
Query: 296 ISESPASAFPGLLSSLLAQGFLSC-PSNLSQDTL-IDFNAGLPKVRHESSINALYDNLSM 123
IS S + AFPGLLS+L+AQG + P SQD++ I+FN L KVRHES+INALY +L
Sbjct: 792 ISNSTSIAFPGLLSTLMAQGLIKLTPPAQSQDSVGIEFNTELLKVRHESAINALYSDLPR 851
Query: 122 QCRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
QC TCG+R+ QEE HMDWH+T +R++RN+ Q S W
Sbjct: 852 QCTTCGLRFKFQEEHSSHMDWHVTKNRISRNRKQKPSRKW 891
>gb|OAY74981.1| Polyadenylation and cleavage factor [Ananas comosus]
Length = 860
Score = 134 bits (338), Expect(2) = 8e-41
Identities = 75/171 (43%), Positives = 104/171 (60%)
Frame = -2
Query: 2160 ATSNSNPNPNPMKRDREKFEARPALRDRFDAKVEEMKQRGPVGTPEITSLFGDFLLELTR 1981
A +++ P+P + E+F A R+ ++V + P E+ ++ + L ELT
Sbjct: 35 AAADARPSPPIL----ERFRAMIREREEEMSEVLDGDPPPPPTAAEVVRMYEEVLAELTF 90
Query: 1980 NSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLY 1801
NSKP+I ELT IA ++ GIANAI RI+EVP++QKLPS YLLDSI+KN+G Y +
Sbjct: 91 NSKPIITELTIIAGQHIQFAQGIANAICARILEVPMDQKLPSLYLLDSIVKNIGQDYVRH 150
Query: 1800 FAGRLDTIFIDTYRKLSPSLCPAMVHLFKTWGKSIPSAARDKIEDFLQKEP 1648
FA RL +F + Y ++ PSL AM HLF TW + PS+ KIED LQ P
Sbjct: 151 FASRLPKVFCEAYNQVHPSLYSAMRHLFGTWSQVFPSSVLRKIEDALQFSP 201
Score = 63.9 bits (154), Expect(2) = 8e-41
Identities = 97/369 (26%), Positives = 129/369 (34%), Gaps = 75/369 (20%)
Frame = -3
Query: 1658 KKNHSPASSGDVRYSGSHSPHLLRG-HANAKYLEAHHQMEHSAADAQQTRLPPSLLSYGH 1482
++N ++R S S SP G H N KYLEA +Q + S D Q R G
Sbjct: 202 RENQRSLGIANLRQSESPSPRPSHGIHVNPKYLEARNQFKSSTMDIQHIR--------GV 253
Query: 1481 KSSVRCGEYDHEDHELLPPHLGFERVGTSAIAGVNDVLP---------LPRPSSHPRTGP 1329
S EYDH LPP + VG+ + L +P+ S R G
Sbjct: 254 SSKSGDLEYDHSGS--LPPRVPMAGVGSPGYTATHTNLEGSLLHSRSNIPKVLSPSRIGM 311
Query: 1328 KLN-----------SFSETVADRPSLCGFGSEWPSSCNIELTRGWPDG-----EQNTETS 1197
+ + S V +RPS PS RG E +E S
Sbjct: 312 RRSRSPPGDLYPPVSPPRRVIERPS--------PSRTGFGYGRGRVADQNGIFEMPSEAS 363
Query: 1196 WAYNRKNECDKLHARLLKDSYGS-----SDMPMKESL----------------SSEEEFV 1080
AY N K +AR L D+YG+ +P + L S EEE+V
Sbjct: 364 KAYKLNNGFGKQNARELIDAYGNYRGKDEKLPKLQRLDTNGNVGEATAIKWKTSDEEEYV 423
Query: 1079 WEKMSPTFPRKEYNSTL---------FGHNTDLPRSNASYLGNDF------GSNQYNQSA 945
WE MSPT + ++L R NA + DF G Q
Sbjct: 424 WEDMSPTLADRSRRNSLPPIGPSSGMLSSGPGFSRPNAGIMNTDFVRHSWPGQGQLAAID 483
Query: 944 DIIANPGCRAS--------SDKFEDYVVSHEESMLRSQ-NSYHCQETLKLSN----EAQG 804
D + N R + K+ H ES Q +SYH QE KL + +Q
Sbjct: 484 DPVLNVEDRLPVAGSGHEVNKKYPQSARHHNESFSYYQSSSYHSQEPSKLPHMLRPTSQQ 543
Query: 803 RSAPLAATP 777
PL+ P
Sbjct: 544 SLDPLSRVP 552
>gb|PKA62212.1| hypothetical protein AXF42_Ash015097 [Apostasia shenzhenica]
Length = 985
Score = 134 bits (338), Expect(2) = 4e-40
Identities = 81/183 (44%), Positives = 109/183 (59%), Gaps = 16/183 (8%)
Frame = -2
Query: 2157 TSNSNPNPNPMKRDREKFEAR----PALRDRFDAKV----EEMKQRG--------PVGTP 2026
TS++ NP R EA+ P++ DRF A + EE++ G P G
Sbjct: 7 TSSTVTRENPRAAARPPVEAQLRVSPSILDRFRAMLREREEELRAAGIGEGDPPPPYGR- 65
Query: 2025 EITSLFGDFLLELTRNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYL 1846
EI ++ + L ELT NSKP+I ELT IA + ++H GIA+A+ RI EVP +QKLPS YL
Sbjct: 66 EIVGMYEELLSELTFNSKPIITELTIIAGEQREHAKGIADAVCARIDEVPQDQKLPSLYL 125
Query: 1845 LDSILKNVGDQYRLYFAGRLDTIFIDTYRKLSPSLCPAMVHLFKTWGKSIPSAARDKIED 1666
LDSI+KN+G +Y YFA RL +F + Y ++ SL PAM HLF TW + P + KIED
Sbjct: 126 LDSIVKNIGREYVRYFASRLPKVFCEAYSQVHSSLHPAMRHLFGTWSQVFPVSVLSKIED 185
Query: 1665 FLQ 1657
L+
Sbjct: 186 RLK 188
Score = 61.6 bits (148), Expect(2) = 4e-40
Identities = 70/253 (27%), Positives = 104/253 (41%), Gaps = 47/253 (18%)
Frame = -3
Query: 1676 RLRIFYKKNHSPASSGDVRYSGSHSPHLLRGHANAKYLEAHHQMEHSAADAQQTR-LPPS 1500
RL++ +N P +VR S + H N KYLEA Q E+ A + Q +R + +
Sbjct: 186 RLKLSTPENQRPPGLANVRNSETPPRPSSVIHINPKYLEARKQFENPAMELQPSRDVSSA 245
Query: 1499 LLSYGHKSSVRCGEYDHEDHELLPPHLGFERVGTS-----AIAGVNDVL-----PLPRPS 1350
+ +YG K+ + + D + + P++ R G+S ++AG + L P
Sbjct: 246 IQAYGQKTFIHSDDCDSDYLDFQSPYIRMLREGSSHSLGSSVAGQEGPILKSQKKLEGPL 305
Query: 1349 SHPRTG------PKLNSFS--------ETVADRPSLCGFGSEWPSSCNIELTRGWP--DG 1218
S R G P+ SF E+ + S FGS+ S + R W DG
Sbjct: 306 SPTRIGFRRSMSPRGQSFQRSSPGRVVESTSPFRSELEFGSQRASERHGFPRRNWTLDDG 365
Query: 1217 EQNTETSWAYNRKNECDKLHARLLKDSYGS--------SDMPMKESL------------S 1098
+ AYN C + H R L D+YG+ P + L S
Sbjct: 366 ILQPDALVAYNG---CGRQHQRELIDAYGNYRGKGTVHDRFPKVQRLEYGETINKGWQNS 422
Query: 1097 SEEEFVWEKMSPT 1059
EEE+VWE MSPT
Sbjct: 423 EEEEYVWEDMSPT 435
Score = 101 bits (251), Expect = 3e-18
Identities = 48/111 (43%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
Frame = -3
Query: 329 TLPVPHGTNTGISESPASAFPGLLSSLLAQGFLSC--PSNLSQDTLIDFNAGLPKVRHES 156
T + + +++ S P SAF GL+++L+AQG +S P L++FNA L K+RHES
Sbjct: 767 TTQISNLSSSTASHPPVSAFSGLINTLMAQGLISLSPPVQSQSSVLLEFNAELLKMRHES 826
Query: 155 SINALYDNLSMQCRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
+INA+Y L QC TCG+R+ QE+ HMDWH+T +R+++N+ Q S W
Sbjct: 827 TINAMYMELPRQCTTCGLRFKCQEDHSSHMDWHVTKNRISKNRKQKPSRKW 877
>gb|PKA50132.1| hypothetical protein AXF42_Ash020372 [Apostasia shenzhenica]
Length = 986
Score = 131 bits (329), Expect(2) = 5e-38
Identities = 80/183 (43%), Positives = 108/183 (59%), Gaps = 16/183 (8%)
Frame = -2
Query: 2157 TSNSNPNPNPMKRDREKFEAR----PALRDRFDAKV----EEMKQRG--------PVGTP 2026
TS++ NP R EA+ P++ DRF A + EE++ G P G
Sbjct: 7 TSSTVTRENPRAAARPLVEAQQRVSPSILDRFRAMLREREEELRAAGIGGGDPPPPYGR- 65
Query: 2025 EITSLFGDFLLELTRNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYL 1846
EI ++ + L ELT NSKP+I ELT IA + ++H GIA+A+ I EVP +QKLPS YL
Sbjct: 66 EIVGMYKELLSELTFNSKPIITELTIIAGEQREHAKGIADAVCAWINEVPQDQKLPSLYL 125
Query: 1845 LDSILKNVGDQYRLYFAGRLDTIFIDTYRKLSPSLCPAMVHLFKTWGKSIPSAARDKIED 1666
LDSI+KN+G +Y YFA RL +F + Y ++ SL PAM HLF TW + P + KIED
Sbjct: 126 LDSIVKNIGREYVRYFAARLPKVFCEAYSQVHSSLHPAMRHLFGTWSQVFPISVLSKIED 185
Query: 1665 FLQ 1657
L+
Sbjct: 186 RLK 188
Score = 58.2 bits (139), Expect(2) = 5e-38
Identities = 70/267 (26%), Positives = 104/267 (38%), Gaps = 46/267 (17%)
Frame = -3
Query: 1676 RLRIFYKKNHSPASSGDVRYSGSHSPHLLRGHANAKYLEAHHQMEHSAADAQQTR-LPPS 1500
RL++ +N P +VR S + P + H N KYLE Q E+ A + +R + +
Sbjct: 186 RLKLSTPENQRPPGLANVRNSETPRPSSVI-HINPKYLEDRKQFENPAMELLPSRDVSSA 244
Query: 1499 LLSYGHKSSVRCGEYDHEDHELLPPHLGFERVGTSAIAG----------VNDVLPLPRPS 1350
+ +YG K+SV + D + + P++ R G+S G + L P
Sbjct: 245 IQAYGQKTSVHSDDCDSDYLDFQSPYIRMLREGSSHSLGSSMAEQEGPILKSQKKLKGPL 304
Query: 1349 SHPRTG------PKLNSFSETVADR-------PSLCGFGSEWPSSCNIELTRGWP--DGE 1215
S R G P+ SF + R S FGS+ S + R W DG
Sbjct: 305 SPTRIGFRRSLSPRGQSFQRSSPGRVVESTSPTSGLEFGSQRASERHGFPRRNWTLDDGI 364
Query: 1214 QNTETSWAYNRKNECDKLHARLLKDSYGS--------SDMPMKESL------------SS 1095
+ AYN + H R L D+YG+ P + L S
Sbjct: 365 LQPDALVAYNGYG---RQHQRELIDAYGNYRGKGTDHDRFPKVQRLEYGETINKGWQNSE 421
Query: 1094 EEEFVWEKMSPTFPRKEYNSTLFGHNT 1014
EEE+VWE MSPT + ++ T
Sbjct: 422 EEEYVWEDMSPTLADQSKRGSMLSETT 448
Score = 99.8 bits (247), Expect = 9e-18
Identities = 48/111 (43%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
Frame = -3
Query: 329 TLPVPHGTNTGISESPASAFPGLLSSLLAQGFLSC--PSNLSQDTLIDFNAGLPKVRHES 156
T + + +++ S P SAF GL+++L+AQG +S P L++FNA L K+RHES
Sbjct: 768 TTQITNLSSSAASHPPVSAFSGLINTLMAQGLISLSPPVQSLSSVLLEFNAELLKMRHES 827
Query: 155 SINALYDNLSMQCRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
+INA+Y L QC TCG+R QE+ HMDWH+T +R+++N+ Q S W
Sbjct: 828 TINAMYMELPRQCTTCGLRLKCQEDHSSHMDWHVTKNRISKNRKQKPSRKW 878
>ref|XP_009399215.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Musa acuminata subsp. malaccensis]
ref|XP_009399216.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 1039
Score = 120 bits (300), Expect(2) = 1e-37
Identities = 67/161 (41%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Frame = -2
Query: 2100 ARPALRDRFDAKVEEMKQR----------GPVGTPEITSLFGDFLLELTRNSKPLIMELT 1951
A P++ RF A + E ++ P+ ++ + D L ELT NSKP+I ELT
Sbjct: 26 AAPSIMVRFHAMLREREEELKEATGEDPPPPLTADDVVRCYEDVLAELTFNSKPIISELT 85
Query: 1950 AIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFI 1771
IA + IA+AI R++EVPV+QKLPS YL+DSI+KN+G +Y A RL +F
Sbjct: 86 MIAGHQVRYAKEIADAICARVLEVPVDQKLPSLYLIDSIVKNIGHEYVKILATRLPKVFC 145
Query: 1770 DTYRKLSPSLCPAMVHLFKTWGKSIPSAARDKIEDFLQKEP 1648
+ Y ++ PS M HLFKTW + P + KIED LQ P
Sbjct: 146 EAYNQVHPSQYSPMRHLFKTWSQVFPLSVLQKIEDELQFSP 186
Score = 68.2 bits (165), Expect(2) = 1e-37
Identities = 90/345 (26%), Positives = 118/345 (34%), Gaps = 104/345 (30%)
Frame = -3
Query: 1655 KNHSPASSGDVRYSGSHSPHLLRG-HANAKYLEAHHQMEHSAA--------DAQQT---- 1515
+N P+ R S S SP G H N KYLEA Q E S+ +AQ++
Sbjct: 188 ENERPSGIASTRPSKSTSPCPSHGIHVNPKYLEARRQFEQSSVIHAVDTHKNAQESDYDL 247
Query: 1514 ----------------------RLPPSLLS------YGHKSSVRCGEYDHEDHELLPPHL 1419
+P + +S YG K S + EYD + ELLP L
Sbjct: 248 ERLEGLSSEKPEGWSGATRKLHSMPHARVSSGGLQAYGQKPSAQYSEYDLDQPELLPQRL 307
Query: 1418 GFERVGT--------SAIAGVNDVLP----------------LPRPSSHPRTGPKLNSFS 1311
R G+ S++ +P L RP S P +
Sbjct: 308 AVAREGSPQTAMLRPSSMIDARGSVPYLKNKISVPLSPRRIGLKRPVSPPIVRSHNGTSP 367
Query: 1310 ETVADRPSLCGFGSEWP----SSCNIELTRGWPDGE--QNTETSWAYNRKNECDKLHARL 1149
+ R S FGS + S N L R WP E Q+ E S Y N K H R
Sbjct: 368 RKIGGRASTSHFGSGFEPGRLSDPNGWLGRSWPSNEDPQHVEASTLYKLNNGSGKQHPRD 427
Query: 1148 LKDSYG------------------------SSDMPMKESLSSEEEFVWEKMSPT------ 1059
L D+YG S K S EEE+ WE MSPT
Sbjct: 428 LIDAYGNPRGRVSSYEKFSKVQRLDVNGIASEAAARKWKNSDEEEYDWEDMSPTLSDRSR 487
Query: 1058 ---FPRKEYNSTLFGHNTDLPRSNASYLGNDFGSNQYNQSADIIA 933
PR ++ G T R + + L +DFG + A + A
Sbjct: 488 RNSLPRVGPSAGSLGIRTGFSRPDPAVLESDFGRRSWPGQAQLHA 532
Score = 105 bits (261), Expect = 2e-19
Identities = 54/103 (52%), Positives = 72/103 (69%), Gaps = 2/103 (1%)
Frame = -3
Query: 305 NTGISESPASAFPGLLSSLLAQGFLSCPSNLS-QDTL-IDFNAGLPKVRHESSINALYDN 132
++ +S S SAF GL+SSL+AQG +S S QD+L ++FN L KVRHES+INALY +
Sbjct: 829 SSAVSGSSTSAFSGLISSLMAQGLISLKSPPQPQDSLGVEFNLDLLKVRHESAINALYAD 888
Query: 131 LSMQCRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
L QC TCG+R+ QEE HMDWH+T +R++RN+ Q S W
Sbjct: 889 LPRQCTTCGLRFKCQEEHSSHMDWHVTKNRISRNRKQKPSRKW 931
>ref|XP_021887348.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Carica
papaya]
Length = 1000
Score = 132 bits (332), Expect(2) = 2e-36
Identities = 74/151 (49%), Positives = 96/151 (63%), Gaps = 9/151 (5%)
Frame = -2
Query: 2082 DRFDAKV----EEMKQRG-----PVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKYK 1930
DRF A + +E+K G P E+ L+ L ELT NSKP+I +LT IA + +
Sbjct: 39 DRFKALLKQRDDELKTAGQGEVAPPRAEEVVQLYEVVLSELTFNSKPIITDLTIIAGELR 98
Query: 1929 DHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYRKLS 1750
DH +GIA+AI RI+EVPVEQKLPS YLLDSI+KN+G +Y +F+ RL +F + YR++
Sbjct: 99 DHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRHFSSRLPEVFCEAYRQVH 158
Query: 1749 PSLCPAMVHLFKTWGKSIPSAARDKIEDFLQ 1657
P+L PAM HLF TW P KIE LQ
Sbjct: 159 PNLYPAMRHLFGTWSTVFPLPVLRKIETQLQ 189
Score = 51.2 bits (121), Expect(2) = 2e-36
Identities = 76/264 (28%), Positives = 98/264 (37%), Gaps = 44/264 (16%)
Frame = -3
Query: 1610 SHSPHLLRG-HANAKYLEAHHQMEHSAAD--AQQTRLPPSLLS-YGHKSSVRCGEYDHED 1443
S SP G H N KYL Q+E S D Q R S L YG S+ E+D +
Sbjct: 203 SESPRPTHGIHVNPKYLR---QLESSTTDNHVQNVRERSSDLKVYGQNPSIVYDEFDLDH 259
Query: 1442 HELLPPHLGFERVGTSAIAGVNDVLPLPRPSSHPR-----TGPKLNSFSETVADRPSLCG 1278
E +G +R ++ G+N PR P + F +A S
Sbjct: 260 SEGTSSQVGAQRFNSAG--GLNRPSMTTGADGSPRRFADVASPANSVFDHGLARMISREN 317
Query: 1277 FGSEWPSSCNIELTRGWPDGEQNT-ETSWAYNRKNECDKLHARLLKDSYGSSD------- 1122
SEW + + D N E S AYN N D+ R L D+YGS +
Sbjct: 318 ETSEWRR-------KRYSDNNHNRFEMSAAYNLSNGHDRQGPRALIDAYGSDNSNRSSNN 370
Query: 1121 ------------MPMKESLSS-----EEEFVWEKMSPTFPRKEYNSTL-------FGHNT 1014
M K S S EEEF WE MSPT ++ FG+
Sbjct: 371 KPLQVERLDVNGMGNKVSSKSWQNTEEEEFDWEDMSPTLTDSHRSNDFLSSSVLRFGNVG 430
Query: 1013 DLP---RSNASYLGNDFGSNQYNQ 951
P +SNAS L +D +N Q
Sbjct: 431 SRPGFGKSNASLLKSDIPANLSGQ 454
Score = 94.7 bits (234), Expect = 3e-16
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 4/110 (3%)
Frame = -3
Query: 320 VPHGTNTG--ISESPASAFPGLLSSLLAQGFLSCPSNLS-QDTL-IDFNAGLPKVRHESS 153
VP + G + P SAF GL+SSL+AQG +S + QD+L ++FN L K RHES+
Sbjct: 763 VPGSQSAGLPVPNQPGSAFSGLISSLMAQGLISLTNQPDIQDSLGLEFNMDLLKGRHESA 822
Query: 152 INALYDNLSMQCRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
I+ALY +L QC TCG+R+ QE HMDWH+T +R+++N+ Q S W
Sbjct: 823 ISALYADLPRQCTTCGLRFKCQEAHSMHMDWHVTKNRMSKNRKQKPSRKW 872
>ref|XP_021887349.1| polyadenylation and cleavage factor homolog 4 isoform X2 [Carica
papaya]
Length = 999
Score = 132 bits (332), Expect(2) = 7e-36
Identities = 74/151 (49%), Positives = 96/151 (63%), Gaps = 9/151 (5%)
Frame = -2
Query: 2082 DRFDAKV----EEMKQRG-----PVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKYK 1930
DRF A + +E+K G P E+ L+ L ELT NSKP+I +LT IA + +
Sbjct: 39 DRFKALLKQRDDELKTAGQGEVAPPRAEEVVQLYEVVLSELTFNSKPIITDLTIIAGELR 98
Query: 1929 DHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYRKLS 1750
DH +GIA+AI RI+EVPVEQKLPS YLLDSI+KN+G +Y +F+ RL +F + YR++
Sbjct: 99 DHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVRHFSSRLPEVFCEAYRQVH 158
Query: 1749 PSLCPAMVHLFKTWGKSIPSAARDKIEDFLQ 1657
P+L PAM HLF TW P KIE LQ
Sbjct: 159 PNLYPAMRHLFGTWSTVFPLPVLRKIETQLQ 189
Score = 49.7 bits (117), Expect(2) = 7e-36
Identities = 79/269 (29%), Positives = 101/269 (37%), Gaps = 49/269 (18%)
Frame = -3
Query: 1610 SHSPHLLRG-HANAKYLEAHHQMEHSAAD--AQQTRLPPSLLS-YGHKSSVRCGEYDHED 1443
S SP G H N KYL Q+E S D Q R S L YG S+ E+D +
Sbjct: 203 SESPRPTHGIHVNPKYLR---QLESSTTDNHVQNVRERSSDLKVYGQNPSIVYDEFDLDH 259
Query: 1442 HELLPPHLGFERVGTSAIAGVNDVLPLPRPS-----SHPR-----TGPKLNSFSETVADR 1293
E +G +R ++ G+N RPS PR P + F +A
Sbjct: 260 SEGTSSQVGAQRFNSAG--GLN------RPSMTTGDGSPRRFADVASPANSVFDHGLARM 311
Query: 1292 PSLCGFGSEWPSSCNIELTRGWPDGEQNT-ETSWAYNRKNECDKLHARLLKDSYGSSD-- 1122
S SEW + + D N E S AYN N D+ R L D+YGS +
Sbjct: 312 ISRENETSEWRR-------KRYSDNNHNRFEMSAAYNLSNGHDRQGPRALIDAYGSDNSN 364
Query: 1121 -----------------MPMKESLSS-----EEEFVWEKMSPTFPRKEYNSTL------- 1029
M K S S EEEF WE MSPT ++
Sbjct: 365 RSSNNKPLQVERLDVNGMGNKVSSKSWQNTEEEEFDWEDMSPTLTDSHRSNDFLSSSVLR 424
Query: 1028 FGHNTDLP---RSNASYLGNDFGSNQYNQ 951
FG+ P +SNAS L +D +N Q
Sbjct: 425 FGNVGSRPGFGKSNASLLKSDIPANLSGQ 453
Score = 94.7 bits (234), Expect = 3e-16
Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 4/110 (3%)
Frame = -3
Query: 320 VPHGTNTG--ISESPASAFPGLLSSLLAQGFLSCPSNLS-QDTL-IDFNAGLPKVRHESS 153
VP + G + P SAF GL+SSL+AQG +S + QD+L ++FN L K RHES+
Sbjct: 762 VPGSQSAGLPVPNQPGSAFSGLISSLMAQGLISLTNQPDIQDSLGLEFNMDLLKGRHESA 821
Query: 152 INALYDNLSMQCRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
I+ALY +L QC TCG+R+ QE HMDWH+T +R+++N+ Q S W
Sbjct: 822 ISALYADLPRQCTTCGLRFKCQEAHSMHMDWHVTKNRMSKNRKQKPSRKW 871
>ref|XP_020592403.1| uncharacterized protein LOC110032952 isoform X1 [Phalaenopsis
equestris]
ref|XP_020592404.1| uncharacterized protein LOC110032952 isoform X1 [Phalaenopsis
equestris]
ref|XP_020592405.1| uncharacterized protein LOC110032952 isoform X1 [Phalaenopsis
equestris]
Length = 970
Score = 124 bits (310), Expect(2) = 3e-34
Identities = 70/157 (44%), Positives = 93/157 (59%), Gaps = 9/157 (5%)
Frame = -2
Query: 2100 ARPALRDRFDAKVEEMKQ--RG-------PVGTPEITSLFGDFLLELTRNSKPLIMELTA 1948
A P++ DRF + + ++ RG P G EI ++G+ L ELT NSKP+I ELT
Sbjct: 38 ATPSILDRFRVMLRDREEDLRGCGDETPPPPGENEIVRMYGELLTELTFNSKPIITELTI 97
Query: 1947 IAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFID 1768
IA + +H GIA A+ RI EVP +QKLP YLLDSI+KN+G+ Y FA RL F
Sbjct: 98 IAGEQLEHARGIAEAVCARIDEVPQDQKLPVLYLLDSIVKNIGEDYVRTFAARLPKTFCQ 157
Query: 1767 TYRKLSPSLCPAMVHLFKTWGKSIPSAARDKIEDFLQ 1657
Y + L PAM HLF+TW + P + KIE+ L+
Sbjct: 158 AYNDVHSGLHPAMRHLFQTWSQVFPPSVLRKIENDLK 194
Score = 52.8 bits (125), Expect(2) = 3e-34
Identities = 66/244 (27%), Positives = 96/244 (39%), Gaps = 53/244 (21%)
Frame = -3
Query: 1583 HANAKYLEAHHQMEHSAADAQQTRLPPSLL-SYGHKSSVRCGEYDHEDHELLPPHLGFER 1407
H N KYLEA HQ E D + +R S++ + GH++ + ++D + PP+L R
Sbjct: 219 HVNPKYLEARHQFERPVTDIRHSREVSSVIQTSGHRALTKYNDHDLDHLGFQPPNLRMVR 278
Query: 1406 VGT--------SAIAG---------------VNDVLPLPRPSSHPR-------------- 1338
G+ S++ G V+ R S+ PR
Sbjct: 279 EGSPQALTLQRSSMLGQEGPFLSSQRKVSTRVSPTRIELRRSASPRGERFQRSSPGRVVE 338
Query: 1337 TGPKLNSFSETVADRPSLCG--FGSEWPSSCNIE----LTRGWPDGEQ-NTETSWAYNRK 1179
P+L+S E + RP+ FG ++ LT G Q E AY
Sbjct: 339 AAPRLHSALEVQSRRPNESNGWFGGRLAIDDGVQQSVALTTYSRYGRQRQRELIDAYGNY 398
Query: 1178 NECDKLH------ARLLKDSYGSSDMPMKESLSSEEEFVWEKMSPTF--PRKEYNSTLFG 1023
+ D LH R+ + M S EEE+VWE MSPT P K +STLF
Sbjct: 399 RDKDSLHESFPKIQRINVNGIKGKAQKMDWQNSEEEEYVWENMSPTLADPSKR-SSTLFE 457
Query: 1022 HNTD 1011
+T+
Sbjct: 458 SSTE 461
Score = 106 bits (264), Expect = 8e-20
Identities = 52/111 (46%), Positives = 77/111 (69%), Gaps = 4/111 (3%)
Frame = -3
Query: 323 PVPHGTNT--GISESPASAFPGLLSSLLAQGFLSC-PSNLSQDTL-IDFNAGLPKVRHES 156
P+P N+ S+S S F GL++SL+AQG +S P + SQ+T+ ++FNA L K+RHES
Sbjct: 752 PLPSSQNSCSAASQSSVSGFSGLINSLMAQGLISLTPPSQSQNTVGLEFNAELLKIRHES 811
Query: 155 SINALYDNLSMQCRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
+INA+Y L+ QC TCG+R+ QE+ HMDWH+T +R+++N+ Q S W
Sbjct: 812 AINAMYTELTRQCTTCGLRFTCQEDHSNHMDWHVTKNRISKNRKQKPSRKW 862
>ref|XP_002518518.1| PREDICTED: polyadenylation and cleavage factor homolog 4 [Ricinus
communis]
gb|EEF43905.1| conserved hypothetical protein [Ricinus communis]
Length = 1023
Score = 124 bits (310), Expect(2) = 4e-34
Identities = 69/159 (43%), Positives = 97/159 (61%), Gaps = 13/159 (8%)
Frame = -2
Query: 2094 PALRDRFDAKVEEMKQRGPVG-------------TPEITSLFGDFLLELTRNSKPLIMEL 1954
P+L DRF +++ +++ V + EI L+ L ELT NSKP+I +L
Sbjct: 32 PSLLDRFKVLLKQKEEQARVSMEDDDVAGTSTLSSEEIVQLYELVLDELTFNSKPIITDL 91
Query: 1953 TAIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIF 1774
T IA + ++H GIA+AI RIVEVPV+QKLPS YLLDSI+KN+G Y +F+ RL +F
Sbjct: 92 TIIAGELREHGAGIADAICARIVEVPVDQKLPSLYLLDSIVKNIGRDYVRHFSSRLPEVF 151
Query: 1773 IDTYRKLSPSLCPAMVHLFKTWGKSIPSAARDKIEDFLQ 1657
Y+++ P+L +M HLF+TW P + KIE LQ
Sbjct: 152 CAAYKQVHPNLHTSMRHLFRTWSTVFPPSVLSKIESQLQ 190
Score = 52.4 bits (124), Expect(2) = 4e-34
Identities = 81/310 (26%), Positives = 108/310 (34%), Gaps = 67/310 (21%)
Frame = -3
Query: 1676 RLRIFYKKNHSPASSGDVRYSGSHSPHLLRG-HANAKYLEAHHQMEHSAADAQQTRLPPS 1500
+L+ + N++ SSG S SP H N KY+ + S AQ R S
Sbjct: 188 QLQFSSQANNNNHSSGLSSLKASDSPRTTNVIHVNPKYVRL--EPSPSENSAQHVRGASS 245
Query: 1499 LLS-YGHKSSVRCGEYDHEDHELLPPHLGFERVGT-------SAIAGVNDVLP-----LP 1359
L +GHK + C E+D + E+ P +G +R+ T S + G N + P L
Sbjct: 246 TLKVHGHKPYIGCDEFDSDHVEVTPSKVGAQRLNTMGNTGPSSFVHGPNRLHPPSSSRLT 305
Query: 1358 RPSSHPRTGPK------LNSFSETVADRPSLCGFGSEWP--------SSCNIELTRGW-- 1227
R S R G + ++ F + R L G P S E T W
Sbjct: 306 RRLSPSRIGAERPLPSEVDDFMAGNSPRRFLEGASPSHPVLDCGPLRSMGRDEETNEWRR 365
Query: 1226 ----PDGEQNTETSWAYNRKNECDKLHARLLKDSYGSSDM-------------------- 1119
D + E S AYN N + R L D+YG
Sbjct: 366 KHYSDDNHKKFEASIAYNLSNGHEHQGPRALIDAYGEDKRKRIPNSKHLQIERLDVDGTA 425
Query: 1118 ----PMKESLSSEEEFVWEKMSPT-FPRKEYNSTLF--------GHNTDLPRSNASYLGN 978
P + EEEF WE MSPT R N L G AS L +
Sbjct: 426 NKVGPRSWQNTEEEEFDWEDMSPTLIDRSRSNGLLLSVPPFGGAGARPGFGTRAASRLDS 485
Query: 977 DFGSNQYNQS 948
D S Q Q+
Sbjct: 486 DLRSKQSGQA 495
Score = 105 bits (262), Expect = 2e-19
Identities = 52/112 (46%), Positives = 74/112 (66%), Gaps = 2/112 (1%)
Frame = -3
Query: 332 HTLPVPHGTNTGISESPAS-AFPGLLSSLLAQGFLSCPSNLSQDTL-IDFNAGLPKVRHE 159
H +P+P S PA AF GL++SL+AQG +S QD++ ++FNA L KVRHE
Sbjct: 784 HMIPIPQNAGPVASNQPAGGAFSGLINSLVAQGLISLKQTPVQDSVGLEFNADLLKVRHE 843
Query: 158 SSINALYDNLSMQCRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
S+I+ALY +L QC TCG+R+ QE+ HMDWH+T +R+++N+ Q S W
Sbjct: 844 SAISALYADLPRQCTTCGLRFKCQEDHSSHMDWHVTRNRMSKNRKQKPSRKW 895
>ref|XP_007143212.1| hypothetical protein PHAVU_007G053400g [Phaseolus vulgaris]
gb|ESW15206.1| hypothetical protein PHAVU_007G053400g [Phaseolus vulgaris]
Length = 964
Score = 128 bits (322), Expect(2) = 1e-33
Identities = 67/128 (52%), Positives = 85/128 (66%)
Frame = -2
Query: 2040 PVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKL 1861
P T EI ++ L ELT N KP+I +LT IA + ++H GIA+AI RI+EVP +QKL
Sbjct: 65 PPATEEIVQIYDLLLSELTCNLKPIITDLTIIAEQQREHAKGIADAICARILEVPADQKL 124
Query: 1860 PSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYRKLSPSLCPAMVHLFKTWGKSIPSAAR 1681
PS YLLDSI+KN G +Y YF+ RL +F + YR++ PSL PAM HLF TW K P +
Sbjct: 125 PSLYLLDSIVKNFGQEYIKYFSLRLPEVFCEAYRQVQPSLHPAMRHLFGTWSKVFPPSVL 184
Query: 1680 DKIEDFLQ 1657
KIE LQ
Sbjct: 185 RKIEVELQ 192
Score = 45.8 bits (107), Expect(2) = 1e-33
Identities = 58/226 (25%), Positives = 84/226 (37%), Gaps = 32/226 (14%)
Frame = -3
Query: 1610 SHSPHLLRG-HANAKYLEAHHQMEHSAADAQQTRLPPSLLSYGHKSSVRCGEYDHEDHEL 1434
S SP G H N KYL Q+EHS D+ L S G+ ++ G + H++
Sbjct: 210 SESPRPSHGIHVNPKYLR---QLEHSTVDSVGAE---KLDSSGNANNTNFGIVASKTHQI 263
Query: 1433 LPPHLGFERVGTSAIAGVNDV-LPLPRPSSHPRTGPKLNSFSETVADRPSLCGFGSEWPS 1257
L G R+G + + + PL P N E + PS+ +G
Sbjct: 264 LS---GSSRLGIPSSPSRSGLDRPLSGPMDDYAADSSANRLIERDSPHPSV-DYGVGKVL 319
Query: 1256 SCNIELTRGWP------DGEQNTETSWAYNRKNECDKLHARLLKDSYGSSD--------- 1122
++EL+ W DG TS Y+ N + R L D+YGS
Sbjct: 320 GRDMELSE-WQRKQYAGDGRNRFPTSITYSLSNGHQRQSPRALIDAYGSDKSQETSSSKP 378
Query: 1121 ---------------MPMKESLSSEEEFVWEKMSPTFPRKEYNSTL 1029
+P + EEEF WE MSPT N+++
Sbjct: 379 LLVERLERNGIDNKVLPTSWQNTEEEEFDWEDMSPTLTDHSRNNSI 424
Score = 92.0 bits (227), Expect = 2e-15
Identities = 45/110 (40%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Frame = -3
Query: 326 LPVPHGTNTGISESPASAFPGLLSSLLAQGFLSCPSNL-SQDTL-IDFNAGLPKVRHESS 153
+P P+ S+ P + L+SSL++QG +S + L +QD++ +FN + K+R+ES+
Sbjct: 727 IPHPNACPFMSSQQPTVGYTNLISSLMSQGVISLANQLPAQDSVGTEFNPDILKIRYESA 786
Query: 152 INALYDNLSMQCRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
INALY +L QC TCG+R+ QEE HMDWH+T +R+++++ Q S W
Sbjct: 787 INALYGDLPRQCTTCGLRFRCQEEHSSHMDWHVTKNRMSKSRKQKPSRKW 836
>gb|PIN12436.1| mRNA cleavage and polyadenylation factor I/II complex, subunit Pcf11
[Handroanthus impetiginosus]
Length = 940
Score = 140 bits (354), Expect(2) = 3e-33
Identities = 81/178 (45%), Positives = 110/178 (61%), Gaps = 10/178 (5%)
Frame = -2
Query: 2157 TSNSNPNPNPMKRDREKFEARPAL-RDRFDAKVEEMKQ------RG---PVGTPEITSLF 2008
+S S P P++ D + P L DRF A V+E ++ RG P+ T EI L+
Sbjct: 14 SSGSFSKPPPIQNDGVGMKPLPPLILDRFRAMVKEREEELRVFGRGAVLPLNTDEIVRLY 73
Query: 2007 GDFLLELTRNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILK 1828
L ELT NSKP+I +LT IA + + H +GIA+AI RI+EVPV+QKLPS YLLDSI+K
Sbjct: 74 EIMLSELTINSKPIITDLTIIAGEQRAHAEGIADAICARIIEVPVDQKLPSLYLLDSIVK 133
Query: 1827 NVGDQYRLYFAGRLDTIFIDTYRKLSPSLCPAMVHLFKTWGKSIPSAARDKIEDFLQK 1654
N+G Y YF+ RL +F + Y ++ P++ PAM HLF TW PS+ KIE L++
Sbjct: 134 NIGKDYVRYFSARLPEVFCEAYAQVHPNMHPAMRHLFGTWSAVFPSSVLQKIEAQLKR 191
Score = 32.3 bits (72), Expect(2) = 3e-33
Identities = 66/253 (26%), Positives = 93/253 (36%), Gaps = 22/253 (8%)
Frame = -3
Query: 1655 KNHSPA---SSGDVRYSGSHSPHLLRG-HANAKYLEAHHQMEHSAADAQQTRLPPSLLSY 1488
K +PA SSG S SP G H NAKY+E H+ +S D T
Sbjct: 190 KRSAPANGRSSGLSSSRDSESPGQTHGIHINAKYMEQQHKFGNSIVDTFGTE-------- 241
Query: 1487 GHKSSVRCGEYDHEDHELLPPHLGFERVGTSAIAGVNDVLPLPRP------SSHPRTGPK 1326
G S+ R G + R+ + A + L P S P+
Sbjct: 242 GVSSTGRAGLTTSGLDAIKKSLPSSARITSPASYRIGHSGSLSSPLEEFGMDSPPKKAAV 301
Query: 1325 LNSFSETVADRPSLCGFGSEWPSSCNIELTRGWPDGEQNTETS--WAYNRKNECDKLHAR 1152
S S D G E +S TR W G N + S + Y +KN H
Sbjct: 302 RVSPSRPGIDHALSRAMGREEETS--EWRTRNW-QGNSNLKASAAYKYGKKNLNRGHHTA 358
Query: 1151 LLKDSYG-SSDMPMKE-SLSSEEEFVWEKMSPTF----PRKEYNSTLFGHNT----DLPR 1002
DS G ++ ++ S EEEF W+ M+P P + S+L N+ L
Sbjct: 359 EQLDSNGVEQNIAIRAWQNSEEEEFDWKGMTPALADQRPSNDIYSSLPPGNSMARHSLTT 418
Query: 1001 SNASYLGNDFGSN 963
++A+ D+ SN
Sbjct: 419 NHAASSATDYRSN 431
Score = 85.1 bits (209), Expect = 3e-13
Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 4/110 (3%)
Frame = -3
Query: 320 VPHGTNTG--ISESPAS-AFPGLLSSLLAQGFLSCPSNLSQDTL-IDFNAGLPKVRHESS 153
+P G N G S PA A GL+SSL+AQG +S QD++ +DF+ KVRHES+
Sbjct: 700 LPIGQNIGQVASNPPAGGALSGLISSLMAQGLISLTK---QDSVGVDFDQDSLKVRHESA 756
Query: 152 INALYDNLSMQCRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
I LY +L QC +CG+R+ QEE HMDWH+ +R+ RN+ S W
Sbjct: 757 ITTLYADLPRQCTSCGLRFKGQEEHSKHMDWHVNKNRMLRNRKTKPSPKW 806
>ref|XP_011653861.1| PREDICTED: polyadenylation and cleavage factor homolog 4 [Cucumis
sativus]
ref|XP_011653864.1| PREDICTED: polyadenylation and cleavage factor homolog 4 [Cucumis
sativus]
ref|XP_011653866.1| PREDICTED: polyadenylation and cleavage factor homolog 4 [Cucumis
sativus]
gb|KGN64812.1| hypothetical protein Csa_1G109350 [Cucumis sativus]
Length = 1007
Score = 122 bits (306), Expect(2) = 4e-33
Identities = 75/167 (44%), Positives = 100/167 (59%), Gaps = 9/167 (5%)
Frame = -2
Query: 2142 PNPNPMKRDREKFEARPALRDRFDAKV----EEMKQRG----PVGTPE-ITSLFGDFLLE 1990
PN P K P++ RF A++ +E + G P+ T E I L+ L E
Sbjct: 37 PNELPQK-------PAPSIAHRFRAQLKQRDDEFRVSGHDVVPLPTAEDIVQLYDLMLSE 89
Query: 1989 LTRNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQY 1810
LT NSKP+I +LT +A + ++H GIA+ I RI+EVPV+QKLPS YLLDSI+KNVG +Y
Sbjct: 90 LTFNSKPIITDLTVLADEQREHGKGIADLICARILEVPVDQKLPSLYLLDSIVKNVGHEY 149
Query: 1809 RLYFAGRLDTIFIDTYRKLSPSLCPAMVHLFKTWGKSIPSAARDKIE 1669
YFA RL +F + YR++ P+L AM HLF TW P + KIE
Sbjct: 150 ISYFASRLPEVFCEAYRQVHPNLHNAMRHLFGTWATVFPPSIIRKIE 196
Score = 50.4 bits (119), Expect(2) = 4e-33
Identities = 90/335 (26%), Positives = 129/335 (38%), Gaps = 55/335 (16%)
Frame = -3
Query: 1637 SSGDVRYSGSHSPHLLRG-HANAKYLEAHHQMEHSAAD--AQQTRLPPSLLSYGHKSSVR 1467
SSG S SP G H N KYL Q+EHS D +Q +R ++ + K +
Sbjct: 207 SSGLTSSRASESPRPTHGIHVNPKYLR---QLEHSVVDKHSQDSRGTSAIKVHDKKLASG 263
Query: 1466 CGEYDHEDHELLPPH--LGFERVGT----SAIAGVNDV-LPLPRPSSHPRTGP-----KL 1323
EYD++ + L GF +G+ S G N + L + S R GP +
Sbjct: 264 YEEYDYDHADALEHGGPQGFHSMGSMGHDSFSLGTNKANIKLAKSSLSSRIGPHRPLQSV 323
Query: 1322 NSFSETVADRPSLCGFGSEWPSSCNI-ELTRGW-----PDGEQN-TETSWAYNRKNECDK 1164
ETV PS + E + E T W PD N E++ +YN +N
Sbjct: 324 GDEHETVRASPSQNVYDYEGSKMIDRNEDTNKWRRKQYPDDNLNGLESTSSYNIRNGHAL 383
Query: 1163 LHARLLKDSYGSS--------DMPMKESLS----------------SEEEFVWEKMSPTF 1056
R L ++YGS + P E S EEEF WE MSPT
Sbjct: 384 EGPRALIEAYGSDKGKGYLNDNPPQAEHFSINVIDNKATPVTWQNTEEEEFDWEDMSPTL 443
Query: 1055 PRKEYNSTL---------FGHNTDLPRSNASYLGNDFGSNQYNQSADIIANPGCRASSDK 903
+ N+ + F + RSNA + SN + + PG SS
Sbjct: 444 ADRGRNNDMLKPPVPPSRFRTRSGFERSNAMPIEPGMRSNW----SSPVRLPGI-DSSIV 498
Query: 902 FEDYVVSHEESMLRSQNSYHCQETLKLSNEAQGRS 798
ED V S ++ + + L ++N+ QGR+
Sbjct: 499 IEDVVHSTPDNWNMHNHISQTSQNL-MNNKGQGRN 532
Score = 93.2 bits (230), Expect = 1e-15
Identities = 45/98 (45%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
Frame = -3
Query: 290 ESPASAFPGLLSSLLAQGFLSCPSNLS-QDTL-IDFNAGLPKVRHESSINALYDNLSMQC 117
+ P +A GL+SSL+A+G +S + S QD++ ++FN + KVRHES+I ALY +L QC
Sbjct: 782 QQPGTAISGLISSLMARGLISLNNQASVQDSVGLEFNPDVLKVRHESAITALYADLPRQC 841
Query: 116 RTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
TCG+R+ +QEE HMDWH+T +R+++++ Q S W
Sbjct: 842 MTCGLRFKTQEEHSNHMDWHVTKNRMSKSRKQKPSRKW 879
>ref|XP_014524182.1| polyadenylation and cleavage factor homolog 4 [Vigna radiata var.
radiata]
Length = 967
Score = 128 bits (321), Expect(2) = 2e-32
Identities = 67/128 (52%), Positives = 85/128 (66%)
Frame = -2
Query: 2040 PVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKL 1861
P T EI ++ L ELT N KP+I +LT IA + ++H GIA+AI RI+EVP +QKL
Sbjct: 65 PPTTDEIVQIYDLLLSELTCNLKPIITDLTIIAEQQREHAKGIADAICARILEVPADQKL 124
Query: 1860 PSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYRKLSPSLCPAMVHLFKTWGKSIPSAAR 1681
PS YLLDSI+KN G +Y YF+ RL +F + YR++ PSL PAM HLF TW K P +
Sbjct: 125 PSLYLLDSIVKNFGQEYIKYFSLRLPEVFCEAYRQVQPSLHPAMRHLFGTWSKVFPPSVL 184
Query: 1680 DKIEDFLQ 1657
KIE LQ
Sbjct: 185 RKIEAELQ 192
Score = 42.7 bits (99), Expect(2) = 2e-32
Identities = 56/226 (24%), Positives = 84/226 (37%), Gaps = 32/226 (14%)
Frame = -3
Query: 1610 SHSPHLLRG-HANAKYLEAHHQMEHSAADAQQTRLPPSLLSYGHKSSVRCGEYDHEDHEL 1434
S SP G H N KYL Q++ S D+ L S G+ ++ G + H++
Sbjct: 210 SESPRPSHGIHVNPKYLR---QLDPSTVDSVGAE---KLDSSGNANNTNFGILGSKTHQI 263
Query: 1433 LPPHLGFERVGTSAIAGVNDV-LPLPRPSSHPRTGPKLNSFSETVADRPSLCGFGSEWPS 1257
L G R+G S+ + + PL P N E + P++ +G
Sbjct: 264 LS---GSGRLGISSSPSRSGLDRPLSAPMDEYAADSSANRLIERDSSHPAV-DYGVGKAI 319
Query: 1256 SCNIELTRGWP------DGEQNTETSWAYNRKNECDKLHARLLKDSYGSSD--------- 1122
++EL+ W DG TS Y+ N + R L D+YGS
Sbjct: 320 GRDMELSE-WQRKQYAGDGRNRFPTSITYSLSNGHQRQSPRALIDAYGSDKSQETSSTKP 378
Query: 1121 ---------------MPMKESLSSEEEFVWEKMSPTFPRKEYNSTL 1029
+P + EEEF WE MSPT N+++
Sbjct: 379 LLVERLDRNGIDNKVLPTSWQNTEEEEFDWEDMSPTLTDHSRNNSI 424
Score = 93.6 bits (231), Expect = 8e-16
Identities = 45/110 (40%), Positives = 74/110 (67%), Gaps = 2/110 (1%)
Frame = -3
Query: 326 LPVPHGTNTGISESPASAFPGLLSSLLAQGFLSCPSNL-SQDTL-IDFNAGLPKVRHESS 153
+P+P+ + S+ P + L+SSL++QG +S + L +QD++ +FN + K+R+ES+
Sbjct: 730 IPLPNASPFMSSQQPTVGYTNLISSLMSQGVISLANQLPAQDSVGTEFNPDILKLRYESA 789
Query: 152 INALYDNLSMQCRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
INALY +L QC TCG+R+ QEE HMDWH+T +R+++++ Q S W
Sbjct: 790 INALYGDLPRQCTTCGLRFRCQEEHSSHMDWHVTKNRMSKSRKQKPSRKW 839
>ref|XP_020674645.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Dendrobium
catenatum]
ref|XP_020674646.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Dendrobium
catenatum]
Length = 973
Score = 127 bits (320), Expect(2) = 2e-32
Identities = 77/188 (40%), Positives = 104/188 (55%), Gaps = 18/188 (9%)
Frame = -2
Query: 2166 LMATSNSNPNPNPMKRDREKFEARP---------ALRDRFDAKVEEMKQ--RG------- 2041
+ + S + NP P+ +E+ P ++ DRF A + E ++ RG
Sbjct: 7 ISSASAARENPRPLGFAQERLGRPPTDSAQRATTSILDRFRAMLREREEDLRGSGDETPP 66
Query: 2040 PVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKL 1861
P EI ++G+ L ELT NSKP+I ELT IA ++H IA A+ RI EVP +QKL
Sbjct: 67 PPDGNEIVRMYGELLTELTFNSKPIITELTIIAGDQREHARSIAEAVCARIDEVPQDQKL 126
Query: 1860 PSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYRKLSPSLCPAMVHLFKTWGKSIPSAAR 1681
P+ YLLDSI+KN+GD Y FA RL F Y + SL PAM HLF+TW + P +
Sbjct: 127 PALYLLDSIVKNIGDDYVRTFAARLPKTFCQAYNDVHSSLHPAMRHLFQTWSQVFPHSTL 186
Query: 1680 DKIEDFLQ 1657
KIED L+
Sbjct: 187 RKIEDELK 194
Score = 42.7 bits (99), Expect(2) = 2e-32
Identities = 59/236 (25%), Positives = 82/236 (34%), Gaps = 61/236 (25%)
Frame = -3
Query: 1583 HANAKYLEAHHQMEHSAADAQQTR-LPPSLLSYGHKSSVRCGEYDHEDHELLPPHLGFER 1407
H N KYLEA Q E+ AD + +R + + GH+S + ++D + P L R
Sbjct: 222 HVNPKYLEARRQFENPEADIRHSREVSSGIQVSGHRSFTKYNDHDLDHFGFQPSSLKMVR 281
Query: 1406 VGTSAIAGVNDVLPLPRPSSHPRTGPKLNSFSETVADRPSLCGFG---SEWPSSCNIEL- 1239
G+ L L S + GP L+S VA R S G S P ++
Sbjct: 282 EGSPL------TLTLHGSSMEGQEGPFLSS-QRKVASRVSPTRIGLRRSTSPQGHRFQMS 334
Query: 1238 -------------------------TRGW-------PDGEQNTETSWAYNRKNECDKLHA 1155
+ GW DG Q + YN+ +
Sbjct: 335 SPGRVIEATSRSHSGLDFQSHRASESNGWVGRNLAIDDGAQQSVALTTYNKYG---RQRQ 391
Query: 1154 RLLKDSYGS--------SDMP----------------MKESLSSEEEFVWEKMSPT 1059
R L D+YG+ +P M S EEE+VWE MSPT
Sbjct: 392 RELIDAYGNYRGKDFLHESLPKIQRVDVNGIKGKAGKMDWQNSEEEEYVWEDMSPT 447
Score = 99.8 bits (247), Expect = 9e-18
Identities = 48/107 (44%), Positives = 72/107 (67%), Gaps = 6/107 (5%)
Frame = -3
Query: 305 NTGISESPASAFPGLLSSLLAQGFLSCPSN-----LSQDTL-IDFNAGLPKVRHESSINA 144
++ S+S S F GL+SSL+AQG +S + Q+T+ ++FNA L K+RHES+INA
Sbjct: 759 SSAASQSSVSGFSGLISSLMAQGLISLTPQAQSQCMFQNTMGLEFNAELLKIRHESAINA 818
Query: 143 LYDNLSMQCRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
+Y +L QC TCG+R+ QE+ HMDWH+T +R+++N+ Q S W
Sbjct: 819 MYTDLPRQCTTCGLRFTCQEDHSNHMDWHVTKNRISKNRKQKPSRKW 865
>ref|XP_020674647.1| polyadenylation and cleavage factor homolog 4 isoform X2 [Dendrobium
catenatum]
gb|PKU82431.1| hypothetical protein MA16_Dca005436 [Dendrobium catenatum]
Length = 969
Score = 127 bits (320), Expect(2) = 2e-32
Identities = 77/188 (40%), Positives = 104/188 (55%), Gaps = 18/188 (9%)
Frame = -2
Query: 2166 LMATSNSNPNPNPMKRDREKFEARP---------ALRDRFDAKVEEMKQ--RG------- 2041
+ + S + NP P+ +E+ P ++ DRF A + E ++ RG
Sbjct: 7 ISSASAARENPRPLGFAQERLGRPPTDSAQRATTSILDRFRAMLREREEDLRGSGDETPP 66
Query: 2040 PVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKL 1861
P EI ++G+ L ELT NSKP+I ELT IA ++H IA A+ RI EVP +QKL
Sbjct: 67 PPDGNEIVRMYGELLTELTFNSKPIITELTIIAGDQREHARSIAEAVCARIDEVPQDQKL 126
Query: 1860 PSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYRKLSPSLCPAMVHLFKTWGKSIPSAAR 1681
P+ YLLDSI+KN+GD Y FA RL F Y + SL PAM HLF+TW + P +
Sbjct: 127 PALYLLDSIVKNIGDDYVRTFAARLPKTFCQAYNDVHSSLHPAMRHLFQTWSQVFPHSTL 186
Query: 1680 DKIEDFLQ 1657
KIED L+
Sbjct: 187 RKIEDELK 194
Score = 42.7 bits (99), Expect(2) = 2e-32
Identities = 59/236 (25%), Positives = 82/236 (34%), Gaps = 61/236 (25%)
Frame = -3
Query: 1583 HANAKYLEAHHQMEHSAADAQQTR-LPPSLLSYGHKSSVRCGEYDHEDHELLPPHLGFER 1407
H N KYLEA Q E+ AD + +R + + GH+S + ++D + P L R
Sbjct: 222 HVNPKYLEARRQFENPEADIRHSREVSSGIQVSGHRSFTKYNDHDLDHFGFQPSSLKMVR 281
Query: 1406 VGTSAIAGVNDVLPLPRPSSHPRTGPKLNSFSETVADRPSLCGFG---SEWPSSCNIEL- 1239
G+ L L S + GP L+S VA R S G S P ++
Sbjct: 282 EGSPL------TLTLHGSSMEGQEGPFLSS-QRKVASRVSPTRIGLRRSTSPQGHRFQMS 334
Query: 1238 -------------------------TRGW-------PDGEQNTETSWAYNRKNECDKLHA 1155
+ GW DG Q + YN+ +
Sbjct: 335 SPGRVIEATSRSHSGLDFQSHRASESNGWVGRNLAIDDGAQQSVALTTYNKYG---RQRQ 391
Query: 1154 RLLKDSYGS--------SDMP----------------MKESLSSEEEFVWEKMSPT 1059
R L D+YG+ +P M S EEE+VWE MSPT
Sbjct: 392 RELIDAYGNYRGKDFLHESLPKIQRVDVNGIKGKAGKMDWQNSEEEEYVWEDMSPT 447
Score = 104 bits (260), Expect = 3e-19
Identities = 50/103 (48%), Positives = 73/103 (70%), Gaps = 2/103 (1%)
Frame = -3
Query: 305 NTGISESPASAFPGLLSSLLAQGFLSC-PSNLSQDTL-IDFNAGLPKVRHESSINALYDN 132
++ S+S S F GL+SSL+AQG +S P SQ+T+ ++FNA L K+RHES+INA+Y +
Sbjct: 759 SSAASQSSVSGFSGLISSLMAQGLISLTPQAQSQNTMGLEFNAELLKIRHESAINAMYTD 818
Query: 131 LSMQCRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
L QC TCG+R+ QE+ HMDWH+T +R+++N+ Q S W
Sbjct: 819 LPRQCTTCGLRFTCQEDHSNHMDWHVTKNRISKNRKQKPSRKW 861
>ref|XP_022158856.1| polyadenylation and cleavage factor homolog 4 isoform X2 [Momordica
charantia]
Length = 995
Score = 124 bits (310), Expect(2) = 6e-32
Identities = 69/154 (44%), Positives = 94/154 (61%), Gaps = 1/154 (0%)
Frame = -2
Query: 2097 RPALRDRFDA-KVEEMKQRGPVGTPEITSLFGDFLLELTRNSKPLIMELTAIAAKYKDHV 1921
R L+ R D +V P T +I L+ L ELT NSKP+I +LT +A + ++H
Sbjct: 49 RALLKQRDDEFRVSAHDAATPPSTEDIVQLYELMLSELTFNSKPIITDLTVLADEQREHG 108
Query: 1920 DGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRLYFAGRLDTIFIDTYRKLSPSL 1741
GIA+ I +RI+EVPV+QKLPS YLLDSI+KNVG +Y YF+ RL +F + YR++ P+L
Sbjct: 109 KGIADLICERILEVPVDQKLPSLYLLDSIVKNVGHEYISYFSSRLPQVFCEAYRQVHPNL 168
Query: 1740 CPAMVHLFKTWGKSIPSAARDKIEDFLQKEPFTS 1639
A+ HLF TW P + IE LQ T+
Sbjct: 169 HNALRHLFGTWSTVFPPSILRNIEAQLQLSQLTT 202
Score = 45.1 bits (105), Expect(2) = 6e-32
Identities = 88/366 (24%), Positives = 132/366 (36%), Gaps = 42/366 (11%)
Frame = -3
Query: 1637 SSGDVRYSGSHSPHLLRG-HANAKYLEAHHQMEHSAADA--QQTRLPPSLLSYGHKSSVR 1467
SSG S SP G H N KYL Q+EHS D Q R +L + K +
Sbjct: 205 SSGLTSSRSSESPRPTHGIHVNPKYLR---QLEHSVVDKHIQDARGTSALKVHDKKLAPG 261
Query: 1466 CGEYDHEDHELLPP-----HLGFERVGTSAIAGVNDVLPLPRPSSHPRTGPKLNSFSETV 1302
EYD++ + H F VGT+ + L H R+ + E V
Sbjct: 262 YEEYDYDGTQAFSSIGSMGHDSFA-VGTNKANMKLEKSSLSSRIGHNRSLQSVGDELEAV 320
Query: 1301 ADRPSLCGFGSEWPSSCN-IELTRGW-----PDGEQN-TETSWAYNRKNECDKLHARLLK 1143
PS + E + E T W PD N E++++YN +N R L
Sbjct: 321 RASPSQNVYDYEASRMIDRSEDTNKWRRKQYPDDHLNGLESTYSYNIRNGHALEGPRALI 380
Query: 1142 DSYGSS--------DMPMKESLS----------------SEEEFVWEKMSPTFPRKEYNS 1035
++YGS + P E S EEEF WE MSPT +
Sbjct: 381 EAYGSDKGKGYLNDNPPQVEHFSINGIDNKVTPVTWQNTEEEEFDWEDMSPTLADR---- 436
Query: 1034 TLFGHNTDL--PRSNASYLGNDFGSNQYNQSADIIANPGCRASSDKFEDYVVSHEESMLR 861
G + D+ P S G ++ N ++ PG R+S S + S++
Sbjct: 437 ---GRSNDILKPPVPPSRFRPRLGFDKSNATS---VEPGMRSSWSSQVQLPTSLDSSIV- 489
Query: 860 SQNSYHCQETLKLSNEAQGRSAPLAATPVSPRL-LPWNSCYVQAQGAVFSPNSSDLPTEI 684
++ + +++ P+ A + +P + + + G SP LPT
Sbjct: 490 ------TEDVVPSASDIWNMQNPMNAKGIGTNFQMPLSRRGIASSGEKVSPFVDKLPTND 543
Query: 683 VPPNPP 666
PP
Sbjct: 544 ALHRPP 549
Score = 103 bits (256), Expect = 8e-19
Identities = 53/112 (47%), Positives = 76/112 (67%), Gaps = 3/112 (2%)
Frame = -3
Query: 329 TLPVPHGTNTGI-SESPASAFPGLLSSLLAQGFLSCPSNLS-QDTL-IDFNAGLPKVRHE 159
T+PV I + P +AF GL+SSL+AQG +S + S QD++ ++FN + KVRHE
Sbjct: 755 TMPVSQNAGCLIPGQQPGTAFSGLISSLMAQGLISLNNQPSVQDSIGLEFNPDVLKVRHE 814
Query: 158 SSINALYDNLSMQCRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
S I ALY +L QC TCG+R+ SQEE HMDWH+T +R+++++ Q +SC W
Sbjct: 815 SVIAALYGDLPRQCMTCGLRFKSQEEHSNHMDWHVTKNRMSKSRKQKTSCKW 866
>ref|XP_020417206.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Prunus
persica]
gb|ONI10047.1| hypothetical protein PRUPE_4G024700 [Prunus persica]
Length = 1017
Score = 135 bits (339), Expect(2) = 7e-32
Identities = 76/175 (43%), Positives = 101/175 (57%)
Frame = -2
Query: 2163 MATSNSNPNPNPMKRDREKFEARPALRDRFDAKVEEMKQRGPVGTPEITSLFGDFLLELT 1984
M ++ P P ++F A RD D +V P T EI L+ L EL
Sbjct: 36 MPSNELAQKPQPPTPIVDRFRALLKQRDD-DLRVSPEDDVSPPSTEEIVQLYEMVLAELI 94
Query: 1983 RNSKPLIMELTAIAAKYKDHVDGIANAILDRIVEVPVEQKLPSWYLLDSILKNVGDQYRL 1804
NSKP+I +LT IA + +DH GIA+AI RI+EVPVE KLPS YLLDSI+KN+G Y
Sbjct: 95 FNSKPIITDLTIIAGEQRDHGKGIADAICARILEVPVEHKLPSLYLLDSIVKNIGRDYAK 154
Query: 1803 YFAGRLDTIFIDTYRKLSPSLCPAMVHLFKTWGKSIPSAARDKIEDFLQKEPFTS 1639
YF+ RL +F + YR+++P+ PAM HLF TW P + +IE+ LQ P +
Sbjct: 155 YFSSRLPEVFCEAYRQVNPNQYPAMRHLFGTWSAVFPPSVLRRIEEQLQFSPLVN 209
Score = 33.5 bits (75), Expect(2) = 7e-32
Identities = 57/225 (25%), Positives = 79/225 (35%), Gaps = 32/225 (14%)
Frame = -3
Query: 1637 SSGDVRYSGSHSPHLLRG-HANAKYLEAHHQMEHSAADAQQTRLPPSLLSYGHKSSVRCG 1461
SSG S SP G H N KYL Q++ S D+ ++ S S H
Sbjct: 212 SSGSTPLRASESPRPTHGIHVNPKYLR---QLDSSNVDSVGSQRLNSTGSVSHSPFSLGS 268
Query: 1460 EYDHED------HELLPPHLGFERVGTSAIAGVNDVLPLPRPSSHPRTGPKLNSFSETVA 1299
H P +G +R TSA+ +S R G + + +
Sbjct: 269 NRLHPSSTTRLARSSSPSDIGLDRSLTSAVD------EFAAENSPKRFGERASPSNSVFD 322
Query: 1298 DRPSLCGFGSEWPSSCNIELTRGWPDGEQNT-ETSWAYNR-KNECDKLHARLLKDSYGS- 1128
R E P+ + + DG Q +TS YN N + R L D+YG
Sbjct: 323 YRLGGAIGRDEEPNELR---GKRYLDGSQKRFDTSVTYNNLSNGLEHQRPRALIDAYGKD 379
Query: 1127 ------SDMPMKESL----------------SSEEEFVWEKMSPT 1059
+D+P+ L + EEEF WE MSPT
Sbjct: 380 SGDRSLNDIPLVGRLGLNGLDHKATQMSWQNTEEEEFDWEDMSPT 424
Score = 100 bits (249), Expect = 6e-18
Identities = 51/99 (51%), Positives = 68/99 (68%), Gaps = 2/99 (2%)
Frame = -3
Query: 293 SESPASAFPGLLSSLLAQGFLSCPSNLS-QDTL-IDFNAGLPKVRHESSINALYDNLSMQ 120
S P SA+ GL SSL+AQG +S + + QD++ I+FNA L KVRHES I ALY +L Q
Sbjct: 791 SNQPGSAYSGLFSSLMAQGLISLTNQSTVQDSVGIEFNADLLKVRHESVIKALYSDLPRQ 850
Query: 119 CRTCGMRYISQEELIGHMDWHMTVDRVARNQNQTSSCNW 3
C TCG+R+ QEE HMDWH+T +R+++N+ Q S W
Sbjct: 851 CTTCGLRFKCQEEHSSHMDWHVTKNRMSKNRKQKPSRKW 889