BLASTX nr result
ID: Ophiopogon22_contig00010304
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00010304
(526 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020268472.1| protein RRP6-like 2 [Asparagus officinalis] ... 116 6e-27
ref|XP_019704952.1| PREDICTED: protein RRP6-like 2 isoform X2 [E... 84 4e-16
ref|XP_010932653.1| PREDICTED: protein RRP6-like 2 isoform X2 [E... 83 3e-15
ref|XP_010932652.1| PREDICTED: protein RRP6-like 2 isoform X1 [E... 83 3e-15
ref|XP_020105187.1| protein RRP6-like 2 [Ananas comosus] 83 4e-15
gb|OAY82313.1| Protein RRP6-like 2 [Ananas comosus] 83 4e-15
ref|XP_010917841.1| PREDICTED: protein RRP6-like 2 [Elaeis guine... 82 5e-15
ref|XP_008789587.1| PREDICTED: protein RRP6-like 2 [Phoenix dact... 77 3e-13
gb|PKA57851.1| exosome complex exonuclease RRP6 [Apostasia shenz... 77 5e-13
ref|XP_009411299.1| PREDICTED: protein RRP6-like 2 isoform X2 [M... 70 7e-11
ref|XP_009411298.1| PREDICTED: protein RRP6-like 2 isoform X1 [M... 70 7e-11
ref|XP_015697475.1| PREDICTED: protein RRP6-like 2 [Oryza brachy... 67 1e-09
ref|XP_010677796.1| PREDICTED: protein RRP6-like 2 [Beta vulgari... 66 2e-09
ref|XP_003573952.1| PREDICTED: protein RRP6-like 1 [Brachypodium... 66 3e-09
ref|XP_021973362.1| protein RRP6-like 2 [Helianthus annuus] >gi|... 65 4e-09
gb|EEC67022.1| hypothetical protein OsI_33743 [Oryza sativa Indi... 65 5e-09
gb|EEE51013.1| hypothetical protein OsJ_31642 [Oryza sativa Japo... 65 5e-09
ref|XP_015614782.1| PREDICTED: protein RRP6-like 2 [Oryza sativa... 65 5e-09
ref|XP_020683594.1| protein RRP6-like 2 [Dendrobium catenatum] >... 64 9e-09
gb|ACN26793.1| unknown [Zea mays] 60 2e-08
>ref|XP_020268472.1| protein RRP6-like 2 [Asparagus officinalis]
gb|ONK68872.1| uncharacterized protein A4U43_C05F16920 [Asparagus officinalis]
Length = 906
Score = 116 bits (291), Expect = 6e-27
Identities = 57/86 (66%), Positives = 67/86 (77%)
Frame = -2
Query: 522 KKNGKQPQENEVKAQVKPFDYAAARKNVNFAGVGEHDGDGGLDSNPLDSGEKRRASAMGR 343
+KN + QENEV+ QVKPFDYAAAR+N+ F GV EH D LD+NP +S EKR+ S GR
Sbjct: 821 EKNRRPSQENEVRIQVKPFDYAAARRNIEFGGVEEHFKDAELDNNPSESTEKRKGSDKGR 880
Query: 342 STGEGRERGLRRQAFPPSGNRSTTYK 265
S+GE R RGLRRQAFP SGNRST+YK
Sbjct: 881 SSGEERVRGLRRQAFPASGNRSTSYK 906
>ref|XP_019704952.1| PREDICTED: protein RRP6-like 2 isoform X2 [Elaeis guineensis]
Length = 331
Score = 84.3 bits (207), Expect = 4e-16
Identities = 49/91 (53%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
Frame = -2
Query: 519 KNGKQPQENEVKAQVKPFDYAAARKNVNFAGVGEHD---GDGGLDSNPLDSGEKRRASAM 349
+N K QE EV Q+KPFDYAAARKN+ F VGE D D L ++ + SGE + A
Sbjct: 241 QNHKPSQEPEVNYQLKPFDYAAARKNMKFGEVGEKDIAESDNRLQTSSV-SGEMHKGLAS 299
Query: 348 GRSTGEGRERGL----RRQAFPPSGNRSTTY 268
G+S GE + +G RRQAFPPSGNRSTTY
Sbjct: 300 GQSRGEEKVKGFQHPRRRQAFPPSGNRSTTY 330
>ref|XP_010932653.1| PREDICTED: protein RRP6-like 2 isoform X2 [Elaeis guineensis]
Length = 946
Score = 83.2 bits (204), Expect = 3e-15
Identities = 49/91 (53%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Frame = -2
Query: 519 KNGKQPQENEVKAQVKPFDYAAARKNVNFAGVGEHD---GDGGLDSNPLDSGEKRRASAM 349
+N K QE EV Q+KPFDYAAARKN+ F V E D G+ GL + P DS E +
Sbjct: 856 QNQKPSQEPEVNYQLKPFDYAAARKNIKFGDVEEKDRAKGNDGLRTLP-DSREMHKGPVF 914
Query: 348 GRSTGEGRERGL----RRQAFPPSGNRSTTY 268
G+S G+ R +G RRQAFPPSGNRSTTY
Sbjct: 915 GQSGGKERLKGFQQSRRRQAFPPSGNRSTTY 945
>ref|XP_010932652.1| PREDICTED: protein RRP6-like 2 isoform X1 [Elaeis guineensis]
Length = 954
Score = 83.2 bits (204), Expect = 3e-15
Identities = 49/91 (53%), Positives = 58/91 (63%), Gaps = 7/91 (7%)
Frame = -2
Query: 519 KNGKQPQENEVKAQVKPFDYAAARKNVNFAGVGEHD---GDGGLDSNPLDSGEKRRASAM 349
+N K QE EV Q+KPFDYAAARKN+ F V E D G+ GL + P DS E +
Sbjct: 864 QNQKPSQEPEVNYQLKPFDYAAARKNIKFGDVEEKDRAKGNDGLRTLP-DSREMHKGPVF 922
Query: 348 GRSTGEGRERGL----RRQAFPPSGNRSTTY 268
G+S G+ R +G RRQAFPPSGNRSTTY
Sbjct: 923 GQSGGKERLKGFQQSRRRQAFPPSGNRSTTY 953
>ref|XP_020105187.1| protein RRP6-like 2 [Ananas comosus]
Length = 921
Score = 82.8 bits (203), Expect = 4e-15
Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 10/95 (10%)
Frame = -2
Query: 522 KKNGKQPQENEVKAQVKPFDYAAARKNVNFAGVGEHDG------DGGLDSNPLDSGEKRR 361
++N QE +V Q+KPFDYAAARKN+ F +GE+DG D G+ ++ +G+KR+
Sbjct: 826 QQNLSTSQEAQVTFQLKPFDYAAARKNIKFGNIGEYDGAKGDDDDDGVKASRDSAGDKRK 885
Query: 360 ASAMGRSTGEGR----ERGLRRQAFPPSGNRSTTY 268
+ +GR GE + ++ RRQAFP SGNRSTTY
Sbjct: 886 GAPVGRGRGEEKGKSSQQPRRRQAFPLSGNRSTTY 920
>gb|OAY82313.1| Protein RRP6-like 2 [Ananas comosus]
Length = 937
Score = 82.8 bits (203), Expect = 4e-15
Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 10/95 (10%)
Frame = -2
Query: 522 KKNGKQPQENEVKAQVKPFDYAAARKNVNFAGVGEHDG------DGGLDSNPLDSGEKRR 361
++N QE +V Q+KPFDYAAARKN+ F +GE+DG D G+ ++ +G+KR+
Sbjct: 842 QQNLSTSQEAQVTFQLKPFDYAAARKNIKFGNIGEYDGAKGDDDDDGVKASRDSAGDKRK 901
Query: 360 ASAMGRSTGEGR----ERGLRRQAFPPSGNRSTTY 268
+ +GR GE + ++ RRQAFP SGNRSTTY
Sbjct: 902 GAPVGRGRGEEKGKSSQQPRRRQAFPLSGNRSTTY 936
>ref|XP_010917841.1| PREDICTED: protein RRP6-like 2 [Elaeis guineensis]
Length = 946
Score = 82.4 bits (202), Expect = 5e-15
Identities = 48/92 (52%), Positives = 59/92 (64%), Gaps = 7/92 (7%)
Frame = -2
Query: 522 KKNGKQPQENEVKAQVKPFDYAAARKNVNFAGVGEHD---GDGGLDSNPLDSGEKRRASA 352
++N K QE EV Q+KPFDYAAARKN+ F VG D D L ++ + SGE + A
Sbjct: 855 RQNHKPSQEPEVNYQLKPFDYAAARKNMKFGEVGGKDIAESDNRLQTSSV-SGETHKGLA 913
Query: 351 MGRSTGEGRERGL----RRQAFPPSGNRSTTY 268
G+S GE + +G RRQAFPPSGNRSTTY
Sbjct: 914 SGQSRGEEKVKGFQHPRRRQAFPPSGNRSTTY 945
>ref|XP_008789587.1| PREDICTED: protein RRP6-like 2 [Phoenix dactylifera]
Length = 945
Score = 77.4 bits (189), Expect = 3e-13
Identities = 46/83 (55%), Positives = 54/83 (65%), Gaps = 6/83 (7%)
Frame = -2
Query: 498 ENEVKAQVKPFDYAAARKNVNFAGVGEHD---GDGGLDSNPLDSGEKRRASAMGRSTGE- 331
E +V Q+KPF+YAAARKN+ VGE D D L + P DSGE R+ S G+S GE
Sbjct: 863 EPDVNHQLKPFNYAAARKNMKVGEVGEKDRAESDDRLPTLP-DSGELRKGSMFGQSRGEE 921
Query: 330 --GRERGLRRQAFPPSGNRSTTY 268
G + RRQAFPPSGNRSTTY
Sbjct: 922 VKGLQHPRRRQAFPPSGNRSTTY 944
>gb|PKA57851.1| exosome complex exonuclease RRP6 [Apostasia shenzhenica]
Length = 891
Score = 76.6 bits (187), Expect = 5e-13
Identities = 45/91 (49%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Frame = -2
Query: 522 KKNGKQPQENEVKAQVKPFDYAAARKNVNFAGVGEHDG--DGGLDSNPLDSGEKRRASAM 349
+ N + PQE + QV PFDY AARK V F GE DG DG + S + +
Sbjct: 800 RTNRRPPQEPQQNPQVIPFDYTAARKTVKFGEDGEEDGGEDGESRMDLSKSRGPSKGAVS 859
Query: 348 GRSTGEGRERG---LRRQAFPPSGNRSTTYK 265
+S GE ERG LRRQAFPPSGNRSTTY+
Sbjct: 860 SKSNGERLERGRQPLRRQAFPPSGNRSTTYR 890
>ref|XP_009411299.1| PREDICTED: protein RRP6-like 2 isoform X2 [Musa acuminata subsp.
malaccensis]
Length = 943
Score = 70.5 bits (171), Expect = 7e-11
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Frame = -2
Query: 522 KKNGKQPQENEVKAQVKPFDYAAARKNVNFAGVGEHDG--DGGLDSNPLDSGEKRRAS-- 355
++N K Q+ E+ +KPF+YAAARKNV F G+ + + + ++P DS + RAS
Sbjct: 855 QRNQKSFQKPEINFNLKPFNYAAARKNVKFDDDGDDETKTEDRIKTSP-DSRQMHRASGQ 913
Query: 354 AMGRSTGEGRERGLRRQAFPPSGNRSTTY 268
A G G ++ RRQAFPPSGNRSTTY
Sbjct: 914 AQGDERSRGSQQARRRQAFPPSGNRSTTY 942
>ref|XP_009411298.1| PREDICTED: protein RRP6-like 2 isoform X1 [Musa acuminata subsp.
malaccensis]
Length = 952
Score = 70.5 bits (171), Expect = 7e-11
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Frame = -2
Query: 522 KKNGKQPQENEVKAQVKPFDYAAARKNVNFAGVGEHDG--DGGLDSNPLDSGEKRRAS-- 355
++N K Q+ E+ +KPF+YAAARKNV F G+ + + + ++P DS + RAS
Sbjct: 864 QRNQKSFQKPEINFNLKPFNYAAARKNVKFDDDGDDETKTEDRIKTSP-DSRQMHRASGQ 922
Query: 354 AMGRSTGEGRERGLRRQAFPPSGNRSTTY 268
A G G ++ RRQAFPPSGNRSTTY
Sbjct: 923 AQGDERSRGSQQARRRQAFPPSGNRSTTY 951
>ref|XP_015697475.1| PREDICTED: protein RRP6-like 2 [Oryza brachyantha]
Length = 895
Score = 67.0 bits (162), Expect = 1e-09
Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Frame = -2
Query: 525 YKKNGKQPQENEVKAQVKPFDYAAARKNVNFAGVGEHDGD--------GGLDSNPLDSGE 370
+++N K QE E Q+KPFDYA ARKN++F GEH + ++ N D G+
Sbjct: 805 FQQNHKPHQEPEFNHQLKPFDYAEARKNISF---GEHKAERTRDNAVARAINKNSGDKGK 861
Query: 369 KRRASAMGRSTGEGRERGLRRQAFPPSGNRSTTY 268
G S G G + RRQAFP SGNRS TY
Sbjct: 862 SSNQFEAGESEGSG-QNPRRRQAFPSSGNRSATY 894
>ref|XP_010677796.1| PREDICTED: protein RRP6-like 2 [Beta vulgaris subsp. vulgaris]
gb|KMT11295.1| hypothetical protein BVRB_5g109790 [Beta vulgaris subsp. vulgaris]
Length = 963
Score = 66.2 bits (160), Expect = 2e-09
Identities = 36/82 (43%), Positives = 48/82 (58%)
Frame = -2
Query: 510 KQPQENEVKAQVKPFDYAAARKNVNFAGVGEHDGDGGLDSNPLDSGEKRRASAMGRSTGE 331
K+ E Q KPFDY AARK VNF GV + + G D++ G+K+ + ++ E
Sbjct: 883 KKDSEETCSLQFKPFDYEAARKEVNFQGVAQKESKSG-DNDNNRFGKKKVVTDRSKNDEE 941
Query: 330 GRERGLRRQAFPPSGNRSTTYK 265
+G RRQAFP SGNRS T+K
Sbjct: 942 LLPQGKRRQAFPASGNRSATFK 963
>ref|XP_003573952.1| PREDICTED: protein RRP6-like 1 [Brachypodium distachyon]
gb|KQJ96813.1| hypothetical protein BRADI_3g27252v3 [Brachypodium distachyon]
Length = 906
Score = 65.9 bits (159), Expect = 3e-09
Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Frame = -2
Query: 522 KKNGKQPQENEVKAQVKPFDYAAARKNVNFAGVGEHDGDGGLDSNPL--DSGEKRRASAM 349
++N K +E E Q+KPFDYA ARKN++F V + + DSG+KRR S
Sbjct: 817 QQNHKALEEPEFHDQLKPFDYAEARKNISFGEVKSERRKDNAVARAINKDSGDKRRTSKQ 876
Query: 348 -GRSTGEGR-ERGLRRQAFPPSGNRSTTY 268
G EG + RRQAFPPSGNRS TY
Sbjct: 877 PGGEEDEGDFQNPRRRQAFPPSGNRSATY 905
>ref|XP_021973362.1| protein RRP6-like 2 [Helianthus annuus]
gb|OTG20808.1| hypothetical protein HannXRQ_Chr07g0197171 [Helianthus annuus]
Length = 887
Score = 65.5 bits (158), Expect = 4e-09
Identities = 38/80 (47%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Frame = -2
Query: 480 QVKPFDYAAARKNVNFA--GVGEHDGDGGLDSNPLDSGEKRRASAMGRSTGEGRER---- 319
+VKPFDYAAARK F G G+ DGDGG G K+ GR G ER
Sbjct: 810 EVKPFDYAAARKEGRFGEEGSGDEDGDGGKSKG--KGGRKKAGGGGGRKESAGGERSGDF 867
Query: 318 --GLRRQAFPPSGNRSTTYK 265
G RRQAFP +GNRS+T++
Sbjct: 868 QMGRRRQAFPATGNRSSTFR 887
>gb|EEC67022.1| hypothetical protein OsI_33743 [Oryza sativa Indica Group]
Length = 854
Score = 65.1 bits (157), Expect = 5e-09
Identities = 43/92 (46%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Frame = -2
Query: 522 KKNGKQPQENEVKAQVKPFDYAAARKNVNFAGVGEHDGDGGLDSNPL-----DSGEKRRA 358
++N K QE E Q+KPFDYA ARKN+ F GE + D+ DSG+K R
Sbjct: 765 QQNHKPHQEPEFNHQLKPFDYAEARKNITF---GERKAERIKDNAVARAINKDSGDKGRT 821
Query: 357 S-AMGRSTGEGRERGLR-RQAFPPSGNRSTTY 268
S G EG + R RQAFPPSGNRS TY
Sbjct: 822 SNQFGAGENEGNRQNPRGRQAFPPSGNRSATY 853
>gb|EEE51013.1| hypothetical protein OsJ_31642 [Oryza sativa Japonica Group]
Length = 877
Score = 65.1 bits (157), Expect = 5e-09
Identities = 43/92 (46%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Frame = -2
Query: 522 KKNGKQPQENEVKAQVKPFDYAAARKNVNFAGVGEHDGDGGLDSNPL-----DSGEKRRA 358
++N K QE E Q+KPFDYA ARKN+ F GE + D+ DSG+K R
Sbjct: 788 QQNHKPHQEPEFNHQLKPFDYAEARKNITF---GERKAERIKDNAVARAINKDSGDKGRT 844
Query: 357 S-AMGRSTGEGRERGLR-RQAFPPSGNRSTTY 268
S G EG + R RQAFPPSGNRS TY
Sbjct: 845 SNQFGAGENEGNRQNPRGRQAFPPSGNRSATY 876
>ref|XP_015614782.1| PREDICTED: protein RRP6-like 2 [Oryza sativa Japonica Group]
gb|AAP53938.2| Nucleolar protein, putative, expressed [Oryza sativa Japonica Group]
Length = 902
Score = 65.1 bits (157), Expect = 5e-09
Identities = 43/92 (46%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Frame = -2
Query: 522 KKNGKQPQENEVKAQVKPFDYAAARKNVNFAGVGEHDGDGGLDSNPL-----DSGEKRRA 358
++N K QE E Q+KPFDYA ARKN+ F GE + D+ DSG+K R
Sbjct: 813 QQNHKPHQEPEFNHQLKPFDYAEARKNITF---GERKAERIKDNAVARAINKDSGDKGRT 869
Query: 357 S-AMGRSTGEGRERGLR-RQAFPPSGNRSTTY 268
S G EG + R RQAFPPSGNRS TY
Sbjct: 870 SNQFGAGENEGNRQNPRGRQAFPPSGNRSATY 901
>ref|XP_020683594.1| protein RRP6-like 2 [Dendrobium catenatum]
gb|PKU75722.1| exosome complex exonuclease RRP6 [Dendrobium catenatum]
Length = 867
Score = 64.3 bits (155), Expect = 9e-09
Identities = 41/88 (46%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Frame = -2
Query: 501 QENEVKAQVKPFDYAAARKNVNFAGV--GEHDGDGGLDSN--PLDSGEKRRASAMGRSTG 334
Q N+ +Q+ PFDY+ ARK + F GE DG GG+ P G K R+ G
Sbjct: 780 QANDRPSQLLPFDYSTARKTMQFGEEIGGEDDGGGGMIDGVRPASRGAKE-GFLSSRNNG 838
Query: 333 EGRERGL-----RRQAFPPSGNRSTTYK 265
E RER RRQAFPPSGNRSTTY+
Sbjct: 839 ERRERERGNQPRRRQAFPPSGNRSTTYR 866
>gb|ACN26793.1| unknown [Zea mays]
Length = 142
Score = 60.5 bits (145), Expect = 2e-08
Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = -2
Query: 522 KKNGKQPQENEVKAQVKPFDYAAARKNV--NFAGVGEHDGDGGLDSNPLDSGEKRRASAM 349
K+N K P+E E V PFDYA ARKN+ + D + D+G+K+R S
Sbjct: 51 KQNQKTPREFEFSVPVVPFDYAEARKNLVSSLPKAERRKDDAVARAINTDAGDKQRGSKK 110
Query: 348 GRSTGEGR---ERGLRRQAFPPSGNRSTTY 268
GE + RRQAFPPSGNR+ TY
Sbjct: 111 PPGGGENEGNFQHPRRRQAFPPSGNRNATY 140