BLASTX nr result

ID: Ophiopogon22_contig00009463 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00009463
         (540 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020269713.1| ubiquitin-conjugating enzyme E2 34-like isof...    59   4e-07
ref|XP_020269712.1| ubiquitin-conjugating enzyme E2 34-like isof...    57   2e-06

>ref|XP_020269713.1| ubiquitin-conjugating enzyme E2 34-like isoform X2 [Asparagus
           officinalis]
 gb|ONK66004.1| uncharacterized protein A4U43_C06F3190 [Asparagus officinalis]
          Length = 239

 Score = 58.5 bits (140), Expect = 4e-07
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = +3

Query: 438 LFFFADSKNCPNFKKLFPEYVQKFEQLRAPEQS 536
           L +  +SKNCPNFKKLFPEYV+K+E+LRAPEQS
Sbjct: 140 LAYNCESKNCPNFKKLFPEYVEKYEKLRAPEQS 172


>ref|XP_020269712.1| ubiquitin-conjugating enzyme E2 34-like isoform X1 [Asparagus
           officinalis]
          Length = 240

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = +3

Query: 456 SKNCPNFKKLFPEYVQKFEQLRAPEQS 536
           SKNCPNFKKLFPEYV+K+E+LRAPEQS
Sbjct: 147 SKNCPNFKKLFPEYVEKYEKLRAPEQS 173


Top