BLASTX nr result

ID: Ophiopogon22_contig00008812 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00008812
         (390 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020244292.1| DNA-directed RNA polymerase III subunit RPC4...    56   2e-06
gb|ONK61808.1| uncharacterized protein A4U43_C08F33790 [Asparagu...    56   2e-06
ref|XP_009383296.1| PREDICTED: uncharacterized protein LOC103971...    55   3e-06
gb|PIA50297.1| hypothetical protein AQUCO_01300797v1 [Aquilegia ...    55   4e-06
ref|XP_008799832.1| PREDICTED: uncharacterized protein LOC103714...    54   8e-06
ref|XP_010914453.1| PREDICTED: DNA-directed RNA polymerase III s...    54   8e-06

>ref|XP_020244292.1| DNA-directed RNA polymerase III subunit RPC4-like isoform X1
           [Asparagus officinalis]
 ref|XP_020244294.1| DNA-directed RNA polymerase III subunit RPC4-like isoform X2
           [Asparagus officinalis]
          Length = 296

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 23/32 (71%), Positives = 28/32 (87%)
 Frame = +3

Query: 3   INVKEKHCCILGDLPKKAVVTPDIDSLLESIE 98
           INVKEKHCC+L D+PK  VVTPD+D LL+SI+
Sbjct: 263 INVKEKHCCVLSDVPKSVVVTPDVDFLLDSIK 294


>gb|ONK61808.1| uncharacterized protein A4U43_C08F33790 [Asparagus officinalis]
          Length = 396

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 23/32 (71%), Positives = 28/32 (87%)
 Frame = +3

Query: 3   INVKEKHCCILGDLPKKAVVTPDIDSLLESIE 98
           INVKEKHCC+L D+PK  VVTPD+D LL+SI+
Sbjct: 363 INVKEKHCCVLSDVPKSVVVTPDVDFLLDSIK 394


>ref|XP_009383296.1| PREDICTED: uncharacterized protein LOC103971075 [Musa acuminata
           subsp. malaccensis]
          Length = 298

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 25/32 (78%), Positives = 28/32 (87%)
 Frame = +3

Query: 3   INVKEKHCCILGDLPKKAVVTPDIDSLLESIE 98
           IN KEKHCCILG L K+AV+TPDIDSLL SI+
Sbjct: 264 INTKEKHCCILGKLNKRAVLTPDIDSLLASID 295


>gb|PIA50297.1| hypothetical protein AQUCO_01300797v1 [Aquilegia coerulea]
 gb|PIA50298.1| hypothetical protein AQUCO_01300797v1 [Aquilegia coerulea]
          Length = 298

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 22/28 (78%), Positives = 27/28 (96%)
 Frame = +3

Query: 3   INVKEKHCCILGDLPKKAVVTPDIDSLL 86
           INVKEKHCC+LG+L K+AV+TPD+DSLL
Sbjct: 271 INVKEKHCCVLGELEKRAVITPDVDSLL 298


>ref|XP_008799832.1| PREDICTED: uncharacterized protein LOC103714387 isoform X2 [Phoenix
           dactylifera]
          Length = 297

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 22/34 (64%), Positives = 29/34 (85%)
 Frame = +3

Query: 3   INVKEKHCCILGDLPKKAVVTPDIDSLLESIEKI 104
           IN KEKHCCILG++ K AVVTPD+D+LL+ I+ +
Sbjct: 261 INTKEKHCCILGEIDKHAVVTPDVDALLDYIDAV 294


>ref|XP_010914453.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 isoform X2
           [Elaeis guineensis]
 ref|XP_019710119.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 isoform X2
           [Elaeis guineensis]
          Length = 298

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 21/34 (61%), Positives = 30/34 (88%)
 Frame = +3

Query: 3   INVKEKHCCILGDLPKKAVVTPDIDSLLESIEKI 104
           IN KEKHCCILG++ ++AVVTPD+D+LL+ I+ +
Sbjct: 262 INTKEKHCCILGEINQRAVVTPDVDALLDQIDDV 295


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