BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00008780
         (609 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020246209.1| pentatricopeptide repeat-containing protein ...   294   6e-91
ref|XP_008790955.2| PREDICTED: pentatricopeptide repeat-containi...   262   2e-78
ref|XP_010907154.1| PREDICTED: pentatricopeptide repeat-containi...   252   1e-74
gb|OAY79069.1| Pentatricopeptide repeat-containing protein [Anan...   244   2e-73
ref|XP_020098795.1| pentatricopeptide repeat-containing protein ...   244   6e-73
ref|XP_002453928.1| pentatricopeptide repeat-containing protein ...   217   9e-63
ref|XP_004952633.1| pentatricopeptide repeat-containing protein ...   214   9e-62
ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containi...   213   2e-61
gb|OEL16709.1| Pentatricopeptide repeat-containing protein [Dich...   212   9e-61
gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indi...   211   2e-60
ref|XP_015623961.1| PREDICTED: pentatricopeptide repeat-containi...   210   3e-60
ref|XP_006647336.1| PREDICTED: pentatricopeptide repeat-containi...   210   3e-60
ref|XP_020156048.1| pentatricopeptide repeat-containing protein ...   209   1e-59
gb|OVA03603.1| Pentatricopeptide repeat [Macleaya cordata]            209   3e-59
ref|XP_010244176.2| PREDICTED: pentatricopeptide repeat-containi...   206   3e-58
emb|CBI28363.3| unnamed protein product, partial [Vitis vinifera]     203   5e-57
ref|XP_002269762.3| PREDICTED: pentatricopeptide repeat-containi...   203   5e-57
ref|XP_008645746.1| pentatricopeptide repeat-containing protein ...   197   2e-55
gb|PPD93643.1| hypothetical protein GOBAR_DD09431 [Gossypium bar...   181   1e-50
ref|XP_012476600.1| PREDICTED: putative pentatricopeptide repeat...   182   2e-49

>ref|XP_020246209.1| pentatricopeptide repeat-containing protein At4g13650-like [Asparagus
            officinalis]
          Length = 914

 Score =  294 bits (753), Expect = 6e-91
 Identities = 145/181 (80%), Positives = 160/181 (88%)
 Frame = +2

Query: 2    SEEISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQA 181
            SEEISWD+L+QAFGK+EEHE TLKVFHKIQQ + H+DHKSA FVLNSCG+ +LLNAGIQA
Sbjct: 540  SEEISWDSLVQAFGKSEEHEMTLKVFHKIQQAHGHIDHKSACFVLNSCGSPILLNAGIQA 599

Query: 182  HAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHP 361
            HAYITKRGL ++    N+LINMYSKCGA  HAV+AFNQL EKNS SWTSIISAHVDH HP
Sbjct: 600  HAYITKRGLSSNPNTYNSLINMYSKCGAPGHAVDAFNQLTEKNSDSWTSIISAHVDHGHP 659

Query: 362  SEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSS 541
            SEAI+ FVKMIRKGK PD +TFL V KACGQMGLIDEAFRLFT MIEVYKINPSAE+YSS
Sbjct: 660  SEAINHFVKMIRKGKLPDSTTFLYVFKACGQMGLIDEAFRLFTLMIEVYKINPSAEIYSS 719

Query: 542  M 544
            +
Sbjct: 720  I 720



 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
 Frame = +2

Query: 134 LNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNS 313
           L +C +   L+ G + H    K G + D  + NAL+ +YS CG L +A   F ++ + + 
Sbjct: 110 LKACASFGSLHCGKELHCLAVKLGYMQDLFVANALVKVYSTCGCLRYAESVFEKISQPDL 169

Query: 314 ASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTS 493
            SW+SI+S  V + H ++A+  FV+M R G   D   F   LKA      ID   ++   
Sbjct: 170 ISWSSILSGLVKNGHEADALRLFVEMARTGIHFDSYVFSIGLKAFADQNCIDLGVQVHCH 229

Query: 494 MIEV-----YKINPSAEVYSSMAEVLSCAGMF 574
           MI++     + +N   E Y  + E+ S   +F
Sbjct: 230 MIKMGMYSSFLLNSLVEFYGRIGELASMRKVF 261



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
 Frame = +2

Query: 11  ISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAY 190
           ISW +++    K       L++F ++ +   H D    S  L +      ++ G+Q H +
Sbjct: 170 ISWSSILSGLVKNGHEADALRLFVEMARTGIHFDSYVFSIGLKAFADQNCIDLGVQVHCH 229

Query: 191 ITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSEA 370
           + K G+ +   +N+ L+  Y + G L    + F+ + +K+  SW  +IS H       EA
Sbjct: 230 MIKMGMYSSFLLNS-LVEFYGRIGELASMRKVFDNMLKKDLVSWNIVISCHAQSTCCEEA 288

Query: 371 ISQFVKMIRKGKSP-DCSTFLSVLKACGQMG 460
           +  F  ++ +G S  D  T  S+L+A  ++G
Sbjct: 289 LIYFSTLMHEGTSECDDYTLGSILQAVTRIG 319



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
 Frame = +2

Query: 107 LDHKSASFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEA 286
           LD    + +L SC     L  G   H  I K G+  D  + ++LI+MY+KCG LE +   
Sbjct: 374 LDKFIVTSILKSCAMHQDLEVGKMFHTCIMKAGIELDPFVISSLIDMYAKCGVLEASFRL 433

Query: 287 FNQLPEKNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLI 466
           F  +   ++ +W++II+A+       EA+  F KM       +  T+ S + AC  +G +
Sbjct: 434 FLGIQNPDTVAWSAIIAAYCWKSEFQEALYLFRKMQLDVVRANEFTYTSAILACIALGYL 493

Query: 467 DEAFRLFTSMIEV-YKINPS 523
                +  + I   Y  NPS
Sbjct: 494 QNGKEIHCNAIRSGYSWNPS 513


>ref|XP_008790955.2| PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like
            [Phoenix dactylifera]
          Length = 985

 Score =  262 bits (669), Expect = 2e-78
 Identities = 131/200 (65%), Positives = 158/200 (79%)
 Frame = +2

Query: 8    EISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHA 187
            EISW +LI+AF KA+++E  LK+FH+IQ++   LD  SA FVLNSCG+ +LLNAGIQAH 
Sbjct: 588  EISWGSLIKAFAKAKDYEIILKLFHRIQRSNGQLDRASACFVLNSCGSTLLLNAGIQAHT 647

Query: 188  YITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSE 367
            YITKRGL++D  M+NALI MYS CG L HA+  FNQ+ E+ SASWTS+ISA+V +  PS 
Sbjct: 648  YITKRGLVSDPYMSNALIKMYSNCGNLAHAINVFNQMTERKSASWTSMISANVHNGCPSA 707

Query: 368  AISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSSMA 547
            A+  F+ MIRKGK+P+  TF+SVLKAC QMGL+DEAFRLF SM EVYKINPSAE Y  M 
Sbjct: 708  ALELFMLMIRKGKNPNSDTFVSVLKACAQMGLVDEAFRLFISMTEVYKINPSAEHYCCMV 767

Query: 548  EVLSCAGMFREAEHFIETAI 607
            EVLS  GM REAEHFIE+ I
Sbjct: 768  EVLSQVGMLREAEHFIESVI 787



 Score = 72.8 bits (177), Expect = 2e-11
 Identities = 36/127 (28%), Positives = 69/127 (54%)
 Frame = +2

Query: 125 SFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPE 304
           S VL +C ++  L+ G + H  I K   + D  + NAL+ MY+ CG+++++   F  +  
Sbjct: 146 SVVLRACASIARLDLGREIHCSILKLCYMEDLFVANALVTMYASCGSVQYSARIFWGIQR 205

Query: 305 KNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRL 484
            +  SW+S++S +V + H  EA+  F +M + G   D      VLKA   +G I+   ++
Sbjct: 206 PDLVSWSSMLSGYVKNGHDKEALRFFSEMAQAGVQFDAFVLSIVLKASANLGCINFGIQI 265

Query: 485 FTSMIEV 505
            + ++++
Sbjct: 266 HSCIVKM 272



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 14/189 (7%)
 Frame = +2

Query: 26  LIQAFGKAEEHEGT--------LKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQA 181
           L+  + K  +HE +        LK+F  +Q      D    + +L SC     L  G   
Sbjct: 385 LLDMYIKCIDHETSDYSSNMVPLKLFRCLQSMGTEFDEFIMASILKSCAMQKDLETGKMI 444

Query: 182 HAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHP 361
           HA I K  +  D  + ++LI+MY+KCG LE ++  F    +  +  W++I++AH  +   
Sbjct: 445 HACIMKLEIKLDAYVISSLIDMYAKCGILEASLTVFEGTKDWATVPWSAIVAAHCWNGRF 504

Query: 362 SEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMI------EVYKINPS 523
            EA+  F KM       +  T+ S L AC  +G +     +   +I       V  +N  
Sbjct: 505 LEALQLFRKMQLDHVKDNEFTYTSALLACTALGSLRSGKEIHCHIIRNSYESNVSVVNTL 564

Query: 524 AEVYSSMAE 550
             +YS + +
Sbjct: 565 INLYSRLGQ 573


>ref|XP_010907154.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
            mitochondrial-like [Elaeis guineensis]
          Length = 985

 Score =  252 bits (643), Expect = 1e-74
 Identities = 123/200 (61%), Positives = 155/200 (77%)
 Frame = +2

Query: 8    EISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHA 187
            EISW +LI+A  +A+++E  LK+FH+IQ++   LDH SA FVLNSCG+   LNAGIQAH 
Sbjct: 588  EISWGSLIKALAEAKDYEIILKLFHRIQRSNGQLDHASACFVLNSCGSAFFLNAGIQAHT 647

Query: 188  YITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSE 367
            YITK+GL++   M+NALI MYS CG L HA++ FNQ+ E+ SASWTS+ISA+V +  PS 
Sbjct: 648  YITKKGLVSSPNMSNALIKMYSNCGNLAHAIDVFNQMTERKSASWTSMISANVHNGCPSS 707

Query: 368  AISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSSMA 547
            A+  F+ MIRKGK+P+ +TF+SVLKAC QMGL+DEAFRLF SM EVYKI PSA+ Y  M 
Sbjct: 708  ALELFMLMIRKGKNPNSNTFVSVLKACAQMGLVDEAFRLFVSMTEVYKIKPSAQHYCCMV 767

Query: 548  EVLSCAGMFREAEHFIETAI 607
            EVL   GM REAEHFI++ I
Sbjct: 768  EVLGQVGMLREAEHFIDSVI 787



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
 Frame = +2

Query: 71  KVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMY 250
           K+F  +Q      D    + VL SC     L  G   HA I K  +  D  + ++LI+MY
Sbjct: 408 KIFRSLQSMGAEFDEFIMASVLKSCAMQKDLETGKMIHACIMKLEIKLDAYVISSLIDMY 467

Query: 251 SKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFL 430
           +KCG LE ++  F    +  +  W++II+AH  + H  EA+  F KM     + +  T+ 
Sbjct: 468 AKCGILEASLRVFEGTKKWTTVPWSAIIAAHCWNGHFLEALRFFRKMQLDQVNANEFTYT 527

Query: 431 SVLKACGQMGLIDEAFRLFTSMI------EVYKINPSAEVYSSMAE 550
           SVL AC  +G +     +   +I       V  +N    +YS +++
Sbjct: 528 SVLLACTALGSLRRGKEIHCHIIRNGYESNVSAVNSLVNLYSGLSK 573



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/127 (27%), Positives = 69/127 (54%)
 Frame = +2

Query: 125 SFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPE 304
           S VL +C ++  ++ G + H  I K   + D  + NAL+ MY+ CG+++++   F  + +
Sbjct: 146 SVVLRACASIGSVDLGREIHCSILKLCYMEDLFVANALVTMYASCGSVQYSARVFWGIHQ 205

Query: 305 KNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRL 484
            +  SW+S++S +V + H  EA+  F +M + G   D      VLKA   +G  +   ++
Sbjct: 206 PDLVSWSSMLSGYVKNGHYEEALRLFSEMAQAGVQFDAFVLSIVLKASANLGCTNFGIQI 265

Query: 485 FTSMIEV 505
            + M+++
Sbjct: 266 HSCMVKM 272



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 10/136 (7%)
 Frame = +2

Query: 197 KRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSEAIS 376
           +R +L   K+  +L++ Y++ G +  A   FN +P+K   SWT ++S +  H H  EA+S
Sbjct: 65  RRNVLNQDKLTLSLLHEYTRAGRMREARALFNAMPDKTLVSWTILMSGYTLHGHAIEAMS 124

Query: 377 QFVKMIRKGK----SPDCSTFLSVLKACGQMGLIDEAFRLFTSMI------EVYKINPSA 526
            F +M+R        PD   F  VL+AC  +G +D    +  S++      +++  N   
Sbjct: 125 LFRQMLRLPSDDTLQPDPFVFSVVLRACASIGSVDLGREIHCSILKLCYMEDLFVANALV 184

Query: 527 EVYSSMAEVLSCAGMF 574
            +Y+S   V   A +F
Sbjct: 185 TMYASCGSVQYSARVF 200


>gb|OAY79069.1| Pentatricopeptide repeat-containing protein [Ananas comosus]
          Length = 727

 Score =  244 bits (624), Expect = 2e-73
 Identities = 120/200 (60%), Positives = 152/200 (76%)
 Frame = +2

Query: 8    EISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHA 187
            E SW+  IQAF K   H+G L++FH+IQ +   LDH  A  VL+SCG L+LLN G+QAHA
Sbjct: 496  ENSWNQFIQAFAKLNNHKGILELFHRIQCSNGQLDHSLAHLVLDSCGNLLLLNMGLQAHA 555

Query: 188  YITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSE 367
            YITKRG  ++ K+ NALI MYS  G L HA++AFNQ+PEK+S+SW +II+A+VD+  PS+
Sbjct: 556  YITKRGFASNHKVGNALIKMYSDFGILSHAIDAFNQMPEKSSSSWAAIIAANVDNGCPSK 615

Query: 368  AISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSSMA 547
            A+  F++M+RK KSP+ +TF+SVLKAC Q GLIDEAF LF  M +VY+I+PSAE Y SM 
Sbjct: 616  ALELFIQMVRKDKSPNSNTFVSVLKACAQKGLIDEAFHLFVLMRKVYQIDPSAEHYYSMV 675

Query: 548  EVLSCAGMFREAEHFIETAI 607
            EVL   GMFREAEHFIE  I
Sbjct: 676  EVLGRVGMFREAEHFIERVI 695



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
 Frame = +2

Query: 125 SFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPE 304
           S VL +C     LN G + H  I K   + D  + N L+++Y+ CG++ ++   F ++  
Sbjct: 57  SVVLRACSLAGSLNHGRELHCMILKLFYIEDLFVANGLVSIYANCGSITYSELVFLRIRR 116

Query: 305 KNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRL 484
            +  SWTS++S ++ +    +A+  F  M  +G   D       LKA   +G +    ++
Sbjct: 117 PDLVSWTSMLSGYMKNGLDDDALELFNDMAWRGSRFDAFALSVSLKASSNLGCVRSGIQI 176

Query: 485 FTSMIE------VYKINPSAEVYSSMAEVLSCAGMF 574
              MI+      ++  N   E Y  + E+++   +F
Sbjct: 177 HCVMIKMGFTSCLFLQNCVIEFYGRIGELVAMKQVF 212



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 36/127 (28%), Positives = 60/127 (47%)
 Frame = +2

Query: 68  LKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINM 247
           LK+F         +D    +  L  C   + L  G   HA + K G+ +D  + ++LI+M
Sbjct: 315 LKLFTHFLSTGAKVDEFIFASTLKHCAVRLDLETGRLIHACVAKLGMDSDAHVVSSLIDM 374

Query: 248 YSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTF 427
           YSKCG L+ +   F+++   +  +W+SIIS    +    + +  F  M       +  T+
Sbjct: 375 YSKCGILDSSYCLFSRIEHPDVVTWSSIISGSCSNGQFEKGLQLFRSMQLDYIRANEFTY 434

Query: 428 LSVLKAC 448
            S LKAC
Sbjct: 435 TSALKAC 441


>ref|XP_020098795.1| pentatricopeptide repeat-containing protein At4g13650-like [Ananas
            comosus]
          Length = 803

 Score =  244 bits (624), Expect = 6e-73
 Identities = 120/200 (60%), Positives = 152/200 (76%)
 Frame = +2

Query: 8    EISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHA 187
            E SW+  IQAF K   H+G L++FH+IQ +   LDH  A  VL+SCG L+LLN G+QAHA
Sbjct: 572  ENSWNQFIQAFAKLNNHKGILELFHRIQCSNGQLDHSLAHLVLDSCGNLLLLNMGLQAHA 631

Query: 188  YITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSE 367
            YITKRG  ++ K+ NALI MYS  G L HA++AFNQ+PEK+S+SW +II+A+VD+  PS+
Sbjct: 632  YITKRGFASNHKVGNALIKMYSDFGILSHAIDAFNQMPEKSSSSWAAIIAANVDNGCPSK 691

Query: 368  AISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSSMA 547
            A+  F++M+RK KSP+ +TF+SVLKAC Q GLIDEAF LF  M +VY+I+PSAE Y SM 
Sbjct: 692  ALELFIQMVRKDKSPNSNTFVSVLKACAQKGLIDEAFHLFVLMRKVYQIDPSAEHYYSMV 751

Query: 548  EVLSCAGMFREAEHFIETAI 607
            EVL   GMFREAEHFIE  I
Sbjct: 752  EVLGRVGMFREAEHFIERVI 771



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
 Frame = +2

Query: 125 SFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPE 304
           S VL +C     LN G + H  I K   + D  + N L+++Y+ CG++ ++   F ++  
Sbjct: 133 SVVLRACSLAGSLNHGRELHCMILKLFYIEDLFVANGLVSIYANCGSITYSELVFLRIRR 192

Query: 305 KNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRL 484
            +  SWTS++S ++ +    +A+  F  M  +G   D       LKA   +G +    ++
Sbjct: 193 PDLVSWTSMLSGYMKNGLDDDALELFNDMAWRGSRFDAFALSVSLKASSNLGCVRSGIQI 252

Query: 485 FTSMIE------VYKINPSAEVYSSMAEVLSCAGMF 574
              MI+      ++  N   E Y  + E+++   +F
Sbjct: 253 HCVMIKMGFTSCLFLQNCVIEFYGRIGELVAMKQVF 288



 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 36/127 (28%), Positives = 60/127 (47%)
 Frame = +2

Query: 68  LKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINM 247
           LK+F         +D    +  L  C   + L  G   HA + K G+ +D  + ++LI+M
Sbjct: 391 LKLFTHFLSTGAKVDEFIFASTLKHCAVRLDLETGRLIHACVAKLGMDSDAHVVSSLIDM 450

Query: 248 YSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTF 427
           YSKCG L+ +   F+++   +  +W+SIIS    +    + +  F  M       +  T+
Sbjct: 451 YSKCGILDSSYCLFSRIEHPDVVTWSSIISGSCSNGQFEKGLQLFRSMQLDYIRANEFTY 510

Query: 428 LSVLKAC 448
            S LKAC
Sbjct: 511 TSALKAC 517


>ref|XP_002453928.1| pentatricopeptide repeat-containing protein At3g63370, chloroplastic
            [Sorghum bicolor]
 gb|EES06904.1| hypothetical protein SORBI_3004G164100 [Sorghum bicolor]
          Length = 798

 Score =  217 bits (553), Expect = 9e-63
 Identities = 105/202 (51%), Positives = 147/202 (72%)
 Frame = +2

Query: 2    SEEISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQA 181
            + +ISWDTL+++F + + H G + +FH IQ+   +LD+ +A  +L+SCG L LL  G+QA
Sbjct: 558  NHDISWDTLVESFSQVDHHVGIVNLFHVIQRCGANLDYHTARLILSSCGKLGLLEEGLQA 617

Query: 182  HAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHP 361
            HAY+TKRGL +    N+ LI+MYS CG+L HA +AFN +P+K+++SWTSI++A+V++  P
Sbjct: 618  HAYMTKRGLASTACTNSYLIDMYSSCGSLRHAFDAFNYMPDKDASSWTSIVAANVENGCP 677

Query: 362  SEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSS 541
              AI  F +M ++   P    FLSVLKAC + GL++EAFR F SM EVYKI PS E YS 
Sbjct: 678  ETAIRLFSQMQKEKCRPTPEAFLSVLKACARTGLVNEAFRFFASMTEVYKIQPSEEHYSH 737

Query: 542  MAEVLSCAGMFREAEHFIETAI 607
            M EVLS AGMF+EAEHFI++ +
Sbjct: 738  MIEVLSRAGMFKEAEHFIDSVV 759



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 1/166 (0%)
 Frame = +2

Query: 11  ISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAY 190
           ++W TL+  +         L++   +       D    S  L +C  +  L  G Q H  
Sbjct: 82  VAWTTLMSGYATHGPASEALELLLCMLGLLVRPDAFVFSVALRACAAVGSLGLGRQLHGA 141

Query: 191 ITKRGLL-TDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSE 367
           + K G +  D  + N L+ MYS C +L  A + F  +   +  SWTS++SA+ ++   +E
Sbjct: 142 VAKLGYVGADLFVANGLVTMYSSCQSLRCAEKVFGSITSPDLVSWTSMLSAYTENGCDAE 201

Query: 368 AISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEV 505
           A+  F++M R G + D  T    L+A   +G +    +L   MI++
Sbjct: 202 ALMLFMEMARDGIACDAFTLSVALRAASSLGHVGLGHQLHCCMIKM 247



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 38/131 (29%), Positives = 67/131 (51%)
 Frame = +2

Query: 107 LDHKSASFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEA 286
           LD    +  L SC + + L AG   HA I K  +  D  + ++L++MY+KCGALE +   
Sbjct: 392 LDQFIVASSLKSCASGLDLVAGRMLHACILKSNMNPDSFVTSSLVDMYAKCGALEESNML 451

Query: 287 FNQLPEKNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLI 466
           F++     +A W++ IS +  +     A+  F +M  +   P+  T+ ++L AC  +G  
Sbjct: 452 FSRTKNPGTAVWSAAISGNCLNGQYGRAVHLFRRMQSEHVQPNEFTYTAILTACMALGDT 511

Query: 467 DEAFRLFTSMI 499
           D    + ++ I
Sbjct: 512 DSGMEIHSNSI 522


>ref|XP_004952633.1| pentatricopeptide repeat-containing protein At3g53360, mitochondrial
            [Setaria italica]
 gb|KQL29873.1| hypothetical protein SETIT_019566mg [Setaria italica]
          Length = 798

 Score =  214 bits (546), Expect = 9e-62
 Identities = 106/203 (52%), Positives = 142/203 (69%), Gaps = 1/203 (0%)
 Frame = +2

Query: 2    SEEISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQA 181
            + E+SW TL++AF +A +H G + +FH IQ     +DH +A  +L+SCG L LL  G+QA
Sbjct: 555  NHEVSWGTLVEAFYQAGDHVGIVNLFHVIQCCGVEVDHHTARLILSSCGKLALLEEGLQA 614

Query: 182  HAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHP 361
            HAY+TKRGL +   MN  LINMYS CG+L HA +AFN +P+K+++SWTSII+A+V++  P
Sbjct: 615  HAYMTKRGLASTACMNTHLINMYSNCGSLRHAFDAFNYMPDKDASSWTSIITANVENGCP 674

Query: 362  SEAISQFVKMIRKGK-SPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYS 538
              A+  F +M+ K K  P    FLS LKAC + GL+ EAFR F SM +VYKI PS   YS
Sbjct: 675  ETAVRLFSQMLSKEKYHPTSKAFLSALKACAKTGLVSEAFRFFVSMTDVYKIQPSEGHYS 734

Query: 539  SMAEVLSCAGMFREAEHFIETAI 607
             M EVL  AGMF+EAEHFI++ +
Sbjct: 735  HMIEVLGRAGMFKEAEHFIDSVV 757



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 36/118 (30%), Positives = 64/118 (54%)
 Frame = +2

Query: 107 LDHKSASFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEA 286
           LD    +  L SC + + L AG   HA I K  +  D  + ++L++MY+KCGALE +   
Sbjct: 389 LDQFIVASSLKSCASDLDLAAGRMLHACILKSSMNPDSYVTSSLVDMYAKCGALEESNLL 448

Query: 287 FNQLPEKNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMG 460
           F++     +A+W+++I+ +  +     A+  F +M  +   P+  T+ +VL AC  +G
Sbjct: 449 FSRTKNPGTAAWSAVIAGNCLNGQYGRAVHLFRRMQAEHVQPNEFTYTAVLTACMALG 506



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
 Frame = +2

Query: 125 SFVLNSCGTLVLLNAGIQAHAYITKRGLL-TDQKMNNALINMYSKCGALEHAVEAFNQLP 301
           S  L +C  +  L  G Q H  + K G +  D  + N L+ MYS C +L  A + F+ + 
Sbjct: 117 SVALRACAAVGSLRLGRQLHGAVAKLGYVGADLFVANGLVTMYSSCQSLRCAEKVFSGIA 176

Query: 302 EKNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFR 481
             +  S TS++SA+ ++   +EA+  F++M+  G + D  T    L A   +G +    +
Sbjct: 177 APDIVSLTSMLSAYTENGCDAEALMLFMEMVCDGVACDAFTLSVALMAASSLGHVGLGHQ 236

Query: 482 LFTSMIEV 505
           L   MI++
Sbjct: 237 LHCCMIKM 244


>ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39530-like
            [Brachypodium distachyon]
 gb|PNT68754.1| hypothetical protein BRADI_3g44810v3 [Brachypodium distachyon]
          Length = 789

 Score =  213 bits (543), Expect = 2e-61
 Identities = 106/202 (52%), Positives = 143/202 (70%)
 Frame = +2

Query: 2    SEEISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQA 181
            + EISWDTL++ F +A +H G L +FH IQ++   LD+ +A  +L SCG L LL  G+QA
Sbjct: 548  NREISWDTLVKEFSQAGDHIGVLNLFHVIQRSGGVLDYPTACHILTSCGKLKLLCEGLQA 607

Query: 182  HAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHP 361
            HAY+TKRGL +   +++ LI+MYSKCG ++ A +AF  + +KN++ WTS+I AH+++  P
Sbjct: 608  HAYLTKRGLASKPCISSHLIDMYSKCGTVKDAFDAFRYMSDKNASCWTSVIIAHLENGCP 667

Query: 362  SEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSS 541
              AI  FV+M+RK K P    FLSVLKAC ++GL+ EAF+ F SM EVYKI PS   YS 
Sbjct: 668  EIAIDLFVQMLRKEKIPTSLAFLSVLKACAEVGLVSEAFQFFVSMTEVYKIQPSEAHYSH 727

Query: 542  MAEVLSCAGMFREAEHFIETAI 607
            M EVL  AGMFREAEHFI + +
Sbjct: 728  MIEVLGRAGMFREAEHFIISVV 749



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 36/109 (33%), Positives = 59/109 (54%)
 Frame = +2

Query: 134 LNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNS 313
           L SC + + L AG   HAYI K  + +D  + ++L++MY+KCG LE +   F+      +
Sbjct: 391 LRSCASDLDLAAGRMLHAYILKLNMNSDAFVTSSLVDMYAKCGCLEESHLLFSTTKYPGT 450

Query: 314 ASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMG 460
           A W+++IS +  +     A+  F +M      P+  T+ SVL AC  +G
Sbjct: 451 AEWSAVISGNCLNGQFERALHLFRRMQLDHVRPNEFTYTSVLTACIDLG 499



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
 Frame = +2

Query: 125 SFVLNSCGTLVLLNAGIQAHAYITKRGLL-TDQKMNNALINMYSKCGALEHAVEAFNQLP 301
           S  L +C  +     G Q H    K G +  D  + N L+ MY+ C +L  A + FN + 
Sbjct: 110 SVALRACAAIGSQRFGRQLHCAAAKMGYVGADLFVANGLLTMYASCRSLGCAEKVFNGIA 169

Query: 302 EKNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFR 481
             +  SWTS++S + ++   +EA+  FV+M+  G   D  T    L+A   +  +    +
Sbjct: 170 TPDLVSWTSMLSGYTENGCHAEAVMLFVEMVHAGIRCDAFTLSVALRAASSLANLSLGHQ 229

Query: 482 LFTSMIEV 505
           L   +I++
Sbjct: 230 LHCCIIKL 237



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 38/163 (23%), Positives = 70/163 (42%)
 Frame = +2

Query: 11  ISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAY 190
           +SW +++  + +   H   + +F ++       D  + S  L +  +L  L+ G Q H  
Sbjct: 174 VSWTSMLSGYTENGCHAEAVMLFVEMVHAGIRCDAFTLSVALRAASSLANLSLGHQLHCC 233

Query: 191 ITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSEA 370
           I K G      + N LI  Y K   L    + F+ + +K+  S  ++I  + D+    +A
Sbjct: 234 IIKLGFSNSGFLENCLIEFYGKSSELHLMQKVFDDMDDKDLVSSNTVIQCYADNMCDEQA 293

Query: 371 ISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMI 499
           +S F  M+ +G   D  T  S+L    + G  D    +   +I
Sbjct: 294 LSHFRAMMFEGSECDEFTLGSILHVVTRRGAFDYGMEIHGYLI 336


>gb|OEL16709.1| Pentatricopeptide repeat-containing protein [Dichanthelium
            oligosanthes]
          Length = 799

 Score =  212 bits (539), Expect = 9e-61
 Identities = 105/203 (51%), Positives = 140/203 (68%), Gaps = 1/203 (0%)
 Frame = +2

Query: 2    SEEISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQA 181
            + E+SW TL++AF +A++H G + +FH IQ+    LDH +A  +L SCG L  L  G+QA
Sbjct: 557  NHEVSWGTLVEAFAQADDHAGIVNLFHVIQRRGVELDHHTARLILCSCGKLANLEEGLQA 616

Query: 182  HAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHP 361
            HAY+TKRGL +   MN  LI+MYS C +L HA +AFN  P+K+++SWTSII+A+VD+  P
Sbjct: 617  HAYMTKRGLASTACMNTQLIDMYSNCSSLRHAFDAFNYTPDKDASSWTSIIAANVDNGCP 676

Query: 362  SEAISQFVKMIRKGK-SPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYS 538
              AI  F +M+ + K  P    FLSVL+AC + GL+ EAFR F SM EVYKI PS   YS
Sbjct: 677  GTAIRLFSQMLMREKCRPTPEAFLSVLQACAKTGLVSEAFRFFVSMTEVYKIQPSEGHYS 736

Query: 539  SMAEVLSCAGMFREAEHFIETAI 607
             M E L  AGMF+EAEHFI++ +
Sbjct: 737  HMIEALGRAGMFKEAEHFIDSVV 759



 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 37/118 (31%), Positives = 63/118 (53%)
 Frame = +2

Query: 107 LDHKSASFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEA 286
           LD    +  L SC + + L AG   HA+I K     D  + ++L++MY+KCGALE +   
Sbjct: 391 LDQFIMASSLKSCASDLDLAAGRMLHAFILKSIENPDSFVTSSLVDMYAKCGALEESNLL 450

Query: 287 FNQLPEKNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMG 460
           F++     +A+W+++IS +  +     A+  F +M  +   P+  T+ SVL A   +G
Sbjct: 451 FSRTKNPGTAAWSAVISGNCLNGQYGRAMHLFRRMQGEHVQPNEFTYTSVLMASMALG 508



 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
 Frame = +2

Query: 125 SFVLNSCGTLVLLNAGIQAHAYITKRGLL-TDQKMNNALINMYSKCGALEHAVEAFNQLP 301
           S  L +C  +  L  G Q H  + K G +  D  + N L+ MYS C +L  A + F  + 
Sbjct: 119 SVALRACAAVGSLRFGRQLHGAVAKLGYVGADLFVANGLVTMYSSCQSLRCAEKVFGAIA 178

Query: 302 EKNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFR 481
             +  S TS++SA+ ++   +EA+  F++M R G + D       LKA   +  +    +
Sbjct: 179 TPDLVSLTSMLSAYTENGCDAEALMLFMEMARDGVACDAFALSVALKAASSLSHVGLGHQ 238

Query: 482 LFTSMIEV 505
           L   MI++
Sbjct: 239 LHGCMIKM 246


>gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indica Group]
          Length = 787

 Score =  211 bits (536), Expect = 2e-60
 Identities = 108/202 (53%), Positives = 141/202 (69%)
 Frame = +2

Query: 2    SEEISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQA 181
            + EISW TL Q F +  +H G L +FH IQ++   LD+ +A  +L+SCG    L  G+QA
Sbjct: 546  NSEISWGTLFQEFAELGDHLGILNLFHVIQRSGGVLDYPTACLILSSCGKKAHLPEGLQA 605

Query: 182  HAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHP 361
            HAY+ KRGL +   M + LI+MYS CG+L HA EAF     +NS+SWTSII A V++  P
Sbjct: 606  HAYLMKRGLSSTGCMCDYLIDMYSGCGSLTHAFEAFRNTSGRNSSSWTSIIMASVENGCP 665

Query: 362  SEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSS 541
              AI  FV+M+RK KSP+  +FLSVLKAC ++GL++EAF+ F SM EVYKI PS E YS 
Sbjct: 666  ETAIRLFVQMLRKEKSPNSLSFLSVLKACAEIGLVNEAFQFFVSMTEVYKIQPSEEHYSH 725

Query: 542  MAEVLSCAGMFREAEHFIETAI 607
            M EVL  AGMF+EAEHFI++ +
Sbjct: 726  MIEVLGRAGMFKEAEHFIDSVV 747



 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 1/165 (0%)
 Frame = +2

Query: 11  ISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAY 190
           ++W  L+  +         L +  ++ +     D    S  L +C     L  G Q HA 
Sbjct: 70  VAWTVLMSGYATHGPASEALDLLLRMVEWPLRPDAFVFSVALRACAAAGSLGVGRQVHAA 129

Query: 191 ITKRGLL-TDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSE 367
             K G +  D  + N L+ MY+ C +L  A + F+ +   +S SWTS++SA+ ++   ++
Sbjct: 130 AAKMGYVGADLFVANGLVTMYASCRSLGCAEKVFSGIAAPDSVSWTSMLSAYTENGCDTQ 189

Query: 368 AISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIE 502
           A+  F++MI  G S D  T    L+A   +G +   ++L   MI+
Sbjct: 190 ALMLFLEMIHGGVSCDAYTLSVALRAASSLGHVRLGYQLHCYMIK 234



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 45/159 (28%), Positives = 75/159 (47%)
 Frame = +2

Query: 107 LDHKSASFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEA 286
           LD    +  L SC + + L AG   HA + K  +  D  + ++L++MY+KCG+LE A   
Sbjct: 380 LDQFIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPFVISSLVDMYAKCGSLEEAHIL 439

Query: 287 FNQLPEKNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLI 466
           F++  +  + +W++IIS    +     AI  F  M  +   P+  T+ SVL AC  +G +
Sbjct: 440 FSRTKDPCTVAWSAIISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYTSVLTACMALGDV 499

Query: 467 DEAFRLFTSMIEVYKINPSAEVYSSMAEVLSCAGMFREA 583
                + ++ I       S  V  S+       G F +A
Sbjct: 500 VSGMEIHSNSIR-NGYGTSDSVLRSLISFYLREGQFNQA 537


>ref|XP_015623961.1| PREDICTED: pentatricopeptide repeat-containing protein At3g63370,
            chloroplastic [Oryza sativa Japonica Group]
 dbj|BAD25438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza sativa
            Japonica Group]
 dbj|BAF08931.1| Os02g0529900 [Oryza sativa Japonica Group]
 gb|EAZ23295.1| hypothetical protein OsJ_06992 [Oryza sativa Japonica Group]
 dbj|BAG90987.1| unnamed protein product [Oryza sativa Japonica Group]
 dbj|BAS79024.1| Os02g0529900 [Oryza sativa Japonica Group]
          Length = 787

 Score =  210 bits (535), Expect = 3e-60
 Identities = 108/202 (53%), Positives = 140/202 (69%)
 Frame = +2

Query: 2    SEEISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQA 181
            + EISW TL Q F +  +H G L +FH IQ++   LD+ +A  +L+SCG    L  G+QA
Sbjct: 546  NSEISWGTLFQEFAELGDHLGILNLFHVIQRSGGVLDYPTACLILSSCGKKAHLPEGLQA 605

Query: 182  HAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHP 361
            HAY+ KRGL +   M + LI+MYS CG+L HA EAF     +NS+SWTSII A V++  P
Sbjct: 606  HAYLMKRGLSSTGCMCDYLIDMYSGCGSLTHAFEAFRNTSGRNSSSWTSIIMASVENGCP 665

Query: 362  SEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSS 541
              AI  FV+M+RK KSP+   FLSVLKAC ++GL++EAF+ F SM EVYKI PS E YS 
Sbjct: 666  ETAIRLFVQMLRKEKSPNSLAFLSVLKACAEIGLVNEAFQFFVSMTEVYKIQPSEEHYSH 725

Query: 542  MAEVLSCAGMFREAEHFIETAI 607
            M EVL  AGMF+EAEHFI++ +
Sbjct: 726  MIEVLGRAGMFKEAEHFIDSVV 747



 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 1/165 (0%)
 Frame = +2

Query: 11  ISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAY 190
           ++W  L+  +         L +  ++ +     D    S  L +C     L  G Q HA 
Sbjct: 70  VAWTVLMSGYATHGPASEALDLLLRMVEWPLRPDAFVFSVALRACAAAGSLGVGRQVHAA 129

Query: 191 ITKRGLL-TDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSE 367
             K G +  D  + N L+ MY+ C +L  A + F+ +   +S SWTS++SA+ ++   ++
Sbjct: 130 AAKMGYVGADLFVANGLVTMYASCRSLGCAEKVFSGIAAPDSVSWTSMLSAYTENGCDTQ 189

Query: 368 AISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIE 502
           A+  F++MI  G S D  T    L+A   +G +   ++L   MI+
Sbjct: 190 ALMLFLEMIHGGVSCDAYTLSVALRAASSLGHVRLGYQLHCYMIK 234



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 45/159 (28%), Positives = 75/159 (47%)
 Frame = +2

Query: 107 LDHKSASFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEA 286
           LD    +  L SC + + L AG   HA + K  +  D  + ++L++MY+KCG+LE A   
Sbjct: 380 LDQFIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPFVISSLVDMYAKCGSLEEAHIL 439

Query: 287 FNQLPEKNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLI 466
           F++  +  + +W++IIS    +     AI  F  M  +   P+  T+ SVL AC  +G +
Sbjct: 440 FSRTKDPCTVAWSAIISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYTSVLTACMALGDV 499

Query: 467 DEAFRLFTSMIEVYKINPSAEVYSSMAEVLSCAGMFREA 583
                + ++ I       S  V  S+       G F +A
Sbjct: 500 VSGMEIHSNSIR-NGYGTSDSVLRSLISFYLREGQFNQA 537


>ref|XP_006647336.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39530-like
            [Oryza brachyantha]
          Length = 791

 Score =  210 bits (535), Expect = 3e-60
 Identities = 106/202 (52%), Positives = 140/202 (69%)
 Frame = +2

Query: 2    SEEISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQA 181
            + +ISW TL Q F +  +H G L +FH IQ++   LD+++A  +L+SCG    L  G+QA
Sbjct: 550  NSQISWGTLFQEFAELGDHLGILNLFHAIQRSSGVLDYQTACLILSSCGKNAHLTEGLQA 609

Query: 182  HAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHP 361
            HAY+ KRGL++   M N LI+MYS CG+L+HA EAF     +NS+SWTS+I A V++  P
Sbjct: 610  HAYLLKRGLVSRACMCNYLIDMYSGCGSLKHAFEAFRNTSVRNSSSWTSMIIASVENGCP 669

Query: 362  SEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSS 541
              AI  FV+M+RK K P    FLSVLKAC + GL++EAF+ F SM EVYKI PS E YS 
Sbjct: 670  ETAIRLFVQMLRKEKPPTSLAFLSVLKACAETGLVNEAFQFFVSMTEVYKIQPSVEHYSH 729

Query: 542  MAEVLSCAGMFREAEHFIETAI 607
            M EVL  AGMF+EAEHFI++ +
Sbjct: 730  MIEVLGRAGMFKEAEHFIDSVV 751



 Score = 72.4 bits (176), Expect = 3e-11
 Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 1/170 (0%)
 Frame = +2

Query: 11  ISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAY 190
           ++W  L+  +         L++  ++ +     D    S  L +C  +  L  G Q HA 
Sbjct: 74  VAWTVLMSGYATHGPASEALELLLRMVEWPLRPDAFVFSVALRACAAVGSLGVGRQVHAA 133

Query: 191 ITKRGLL-TDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSE 367
            +K G +  D  + N L+ MY+ C +L  A + FN +   +  SWTS++SA+ ++   ++
Sbjct: 134 ASKMGCVGADLFVANGLVTMYASCRSLGCAEKVFNGIASPDLVSWTSMLSAYTENGRDNQ 193

Query: 368 AISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKIN 517
           A+  F++M+  G S D  T    L+A   +  +   ++L   MI+   +N
Sbjct: 194 ALMLFMEMVHGGVSCDAYTLSVALRAASSLACVSLGYQLHCYMIKSSFVN 243



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 47/161 (29%), Positives = 80/161 (49%)
 Frame = +2

Query: 107 LDHKSASFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEA 286
           LD    +  L SC + + L AG   HA++ K  +++D  + N+L+NMY+KCG+LE A   
Sbjct: 384 LDQFIVASSLKSCASDLDLAAGRMLHAFVLKFDMISDSFVTNSLVNMYAKCGSLEEAHLL 443

Query: 287 FNQLPEKNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLI 466
            ++  +  +A+W++IIS    +     A++ F  M  +   P+  T+ SVL AC  +G +
Sbjct: 444 LSRTKDPCTAAWSTIISGSCLNGQFERAMNLFRTMQLEHVQPNEFTYTSVLTACMALGDV 503

Query: 467 DEAFRLFTSMIEVYKINPSAEVYSSMAEVLSCAGMFREAEH 589
                + ++ I       S  V  S+       G F +A H
Sbjct: 504 VSGMEIHSNSIR-NGYGTSDPVLRSLISFYFRGGHFHKALH 543


>ref|XP_020156048.1| pentatricopeptide repeat-containing protein At3g53360,
            mitochondrial-like [Aegilops tauschii subsp. tauschii]
          Length = 814

 Score =  209 bits (531), Expect = 1e-59
 Identities = 100/202 (49%), Positives = 147/202 (72%)
 Frame = +2

Query: 2    SEEISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQA 181
            + EISW+ L++ F + ++H G L +   IQ++   LD+ ++  +LNSCG L LL  G+QA
Sbjct: 549  NREISWEALVKDFAQGDDHVGILNLLCVIQRSGGVLDYPTSLHILNSCGKLELLREGLQA 608

Query: 182  HAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHP 361
            HAY+TKRGL ++  ++N LI+MYS CG+L++A++AF  + +K++++WTSII AH+++  P
Sbjct: 609  HAYLTKRGLASEPCISNHLIDMYSNCGSLKNALDAFRYMSDKSASTWTSIIIAHLENGCP 668

Query: 362  SEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSS 541
              AI  FV+M+R+ K P    FLSVLKAC ++GL+ EAF+ F SM EVYKI PS   YS 
Sbjct: 669  ETAIDLFVQMLRREKIPTSIAFLSVLKACAEIGLVSEAFQFFVSMTEVYKIEPSEGHYSH 728

Query: 542  MAEVLSCAGMFREAEHFIETAI 607
            M EVLS +GMF+EAEHFI++ +
Sbjct: 729  MIEVLSHSGMFKEAEHFIDSVV 750



 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 42/159 (26%), Positives = 78/159 (49%)
 Frame = +2

Query: 107 LDHKSASFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEA 286
           LDH   +  L  C     L  G   HAY+ K  + +D  + ++L++MY+KCG+++ +   
Sbjct: 383 LDHFIVATSLRLCAFDQDLATGRMLHAYVLKFNMNSDPFVTSSLVDMYAKCGSVDESHVL 442

Query: 287 FNQLPEKNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLI 466
           F++  +  +A+WT++IS +  +     A+  F +M  +   P+  T+ SVL AC  +G +
Sbjct: 443 FSRTKDPGTAAWTAVISGNCLNGQFERAMHLFRRMQLEHVQPNEFTYTSVLTACVALGDV 502

Query: 467 DEAFRLFTSMIEVYKINPSAEVYSSMAEVLSCAGMFREA 583
                +  + I       +A V  S+       G F++A
Sbjct: 503 VGGMEIQGNSIRT-GYGTNASVVQSLISFYLREGQFKQA 540



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
 Frame = +2

Query: 11  ISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAY 190
           ++W  ++  +         L +  ++ +     D    S VL +C  +  L  G Q H  
Sbjct: 73  VAWTAIMSGYATHGPASEALLLLLRMMERSLRPDGFVFSVVLRACAAVGNLRFGRQVHCA 132

Query: 191 ITKRGLL-TDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSE 367
             K G + +D  + N L+ MY+ C +L  A + F+ +   +  SWTS++S + ++   +E
Sbjct: 133 AAKMGYVDSDLFVANGLLTMYASCQSLGCAEKVFDGIAAPDLVSWTSMLSGYTENGCHTE 192

Query: 368 AISQFVKMIRKGKSPDCSTFLSVLKACGQM 457
           A+  FV+MI      D  T    L+A   +
Sbjct: 193 ALMLFVEMIHASIGCDAFTLSVALRAASSL 222


>gb|OVA03603.1| Pentatricopeptide repeat [Macleaya cordata]
          Length = 975

 Score =  209 bits (532), Expect = 3e-59
 Identities = 107/196 (54%), Positives = 137/196 (69%)
 Frame = +2

Query: 8    EISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHA 187
            EISWD LIQA  + E+HE  LK+ ++IQ ++  +D  SAS++L+SC + VLLN G Q HA
Sbjct: 574  EISWDYLIQACMRVEDHETMLKLLYRIQNSHGKIDSTSASYILSSCASPVLLNVGTQIHA 633

Query: 188  YITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSE 367
            Y+TKRGL++D    N+LI MYS CG +  A+ AF+ + EKNS SWTS+ISA+VDH + SE
Sbjct: 634  YMTKRGLISDPATGNSLIKMYSGCGKIADAIAAFSYMLEKNSDSWTSLISANVDHGYSSE 693

Query: 368  AISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSSMA 547
            AI  F +M  K K P+  TF SVLKA  QMGL+DEAFR+  SM E Y+I P+ E Y  + 
Sbjct: 694  AIELFTQMRGKNKLPNSITFTSVLKAYAQMGLVDEAFRVLVSMEENYRIEPAIEHYFCIV 753

Query: 548  EVLSCAGMFREAEHFI 595
            EVL  AGMF EA  FI
Sbjct: 754  EVLGRAGMFEEAREFI 769



 Score = 77.4 bits (189), Expect = 6e-13
 Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 7/172 (4%)
 Frame = +2

Query: 11  ISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSAS-------FVLNSCGTLVLLNA 169
           +SW  L+  + +      TL +F K+ Q++   +++S          VL +C  +  LN 
Sbjct: 90  VSWTILMTGYTRHGPAIETLLIFQKLVQDHTTNNNQSMQPDSFVYGIVLRACANVGNLNY 149

Query: 170 GIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVD 349
           G + H  + K     D  + NAL+ MYS CG+LE +   F  +   +  SW+S+++ +V 
Sbjct: 150 GREIHCRVLKNNGAMDSFVENALVKMYSSCGSLEDSARVFAGILRPDLVSWSSMLNGYVQ 209

Query: 350 HDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEV 505
           +    + +  F+ MIR G   D   F  V+ A   +G ++   ++   +I++
Sbjct: 210 NGLMEQGLGLFITMIRDGIKLDAFAFSMVIGASANLGYLNFGLQVHCCIIKM 261



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/153 (27%), Positives = 75/153 (49%)
 Frame = +2

Query: 11  ISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAY 190
           +SW +++  + +    E  L +F  + ++   LD  + S V+ +   L  LN G+Q H  
Sbjct: 198 VSWSSMLNGYVQNGLMEQGLGLFITMIRDGIKLDAFAFSMVIGASANLGYLNFGLQVHCC 257

Query: 191 ITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSEA 370
           I K G  +   + N+L++ Y+KCG  +   + F ++PE++  SW + I   V +    EA
Sbjct: 258 IIKMGFCSCLFLENSLMDFYAKCGDFDSLKQIFYRMPERDLVSWNTAIKGLVHNLQIYEA 317

Query: 371 ISQFVKMIRKGKSPDCSTFLSVLKACGQMGLID 469
           +  F  ++      D  T  SVL+A   +G  D
Sbjct: 318 LRLFRALMDGALYCDDFTLTSVLQAITSLGAWD 350


>ref|XP_010244176.2| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
            mitochondrial-like [Nelumbo nucifera]
          Length = 896

 Score =  206 bits (524), Expect = 3e-58
 Identities = 106/200 (53%), Positives = 135/200 (67%)
 Frame = +2

Query: 8    EISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHA 187
            +I+W  LIQA    ++HE T K+ H+IQQ+   +D  SAS++L SC   VLLN G QA A
Sbjct: 498  DIAWGFLIQACSSVKDHETTHKILHRIQQSKGDIDPTSASYILESCADPVLLNVGTQAQA 557

Query: 188  YITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSE 367
            YITKRG + D    N+LI MYS CG +  +  AF ++ ++NSASWTSIISA+VDH H SE
Sbjct: 558  YITKRGFIADPVTGNSLIRMYSACGRIADSDTAFKKMHDRNSASWTSIISANVDHGHASE 617

Query: 368  AISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSSMA 547
            A+  F ++  K KS + STF SVLKAC Q GL+DEAF LF SM E+Y I PS E YS + 
Sbjct: 618  ALELFSQIKWKNKSLESSTFTSVLKACAQKGLVDEAFHLFISMNEIYGIKPSMEHYSCLV 677

Query: 548  EVLSCAGMFREAEHFIETAI 607
            EV+  AG F +A  FI+ AI
Sbjct: 678  EVMGRAGRFEDALDFIDEAI 697



 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
 Frame = +2

Query: 11  ISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHL----DHKSASFVLNSCGTLVLLNAGIQ 178
           +SW  L+  + +      TL +F  + Q++++     D    S VL +C  +  L+ G Q
Sbjct: 17  VSWTILMSGYTRHGPATETLMMFQDMVQDHYNESLIPDSFVFSIVLRACSVMENLDYGRQ 76

Query: 179 AHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDH 358
            H  I K     D  + NAL++MY+ CG+L  +   F ++   N  SW+S++  ++ +  
Sbjct: 77  LHGRILKTDGAIDSFVENALVSMYANCGSLSDSSRVFARIVRPNLLSWSSMLCGYMQNGF 136

Query: 359 PSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEV 505
             E +  F +M+R G + D       L AC  +  +D   ++   +I++
Sbjct: 137 EEEGLGLFCEMLRAGTALDDFALSMALGACANLSCLDYGVQIHCYIIKM 185



 Score = 72.4 bits (176), Expect = 3e-11
 Identities = 40/153 (26%), Positives = 80/153 (52%)
 Frame = +2

Query: 11  ISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAY 190
           +SW +++  + +    E  L +F ++ +    LD  + S  L +C  L  L+ G+Q H Y
Sbjct: 122 LSWSSMLCGYMQNGFEEEGLGLFCEMLRAGTALDDFALSMALGACANLSCLDYGVQIHCY 181

Query: 191 ITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSEA 370
           I K G  +   + N+L+  YS+CG ++ +   F+++ +++  SW ++I  HV +    EA
Sbjct: 182 IIKMGFDSCLFLKNSLMEFYSRCGDMDSSNLVFDKMTDRDLVSWNTVIKGHVHNLQSLEA 241

Query: 371 ISQFVKMIRKGKSPDCSTFLSVLKACGQMGLID 469
           +  F  ++ +  + D  T  S+L+A   +  +D
Sbjct: 242 LRIFRALMDEVSNCDEYTLASILQAVTSLRELD 274



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
 Frame = +2

Query: 71  KVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMY 250
           K+F++++      D    S +L  C   + +  G   H+ I K  L  D  + ++LI+MY
Sbjct: 320 KIFNRLKGG--KCDEFIISSILKWCSLRLDIETGKMFHSQIIKLDLTYDAYIMSSLIDMY 377

Query: 251 SKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFL 430
           SKCG +E A   F ++    +  W++II+ +  +    EA+  F +M       +  T+ 
Sbjct: 378 SKCGIVEAAWRVFTEVKNPGTVPWSAIIAGYCWNGWFEEALRLFQEMQFDFYKANEYTYT 437

Query: 431 SVLKACGQMGLIDEAFRLFTSMI------EVYKINPSAEVYS 538
           SVL AC  +G I +   L   ++       V  IN    VYS
Sbjct: 438 SVLLACLALGDITKVKELHCQILRSGYGSNVSIINTLINVYS 479


>emb|CBI28363.3| unnamed protein product, partial [Vitis vinifera]
          Length = 930

 Score =  203 bits (516), Expect = 5e-57
 Identities = 108/196 (55%), Positives = 136/196 (69%)
 Frame = +2

Query: 8    EISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHA 187
            EISW+ LI+A   AE++E   K+  +IQ ++ +LD  SA  +  SC + VLLN G QAHA
Sbjct: 529  EISWNFLIRACLGAEDYEIIHKLLWRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQAHA 588

Query: 188  YITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSE 367
            Y+TKRGL++   ++N+LI MYS CG  + AV+AFN +PEK++ SWTSI+SA V+H HPSE
Sbjct: 589  YMTKRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSE 648

Query: 368  AISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSSMA 547
            A++   +M  K K  D STF SVL AC QMGL+DEAFRLF SM EVY I P  E YS M 
Sbjct: 649  ALNLISQMRWKNKPADQSTFRSVLNACAQMGLVDEAFRLFFSMKEVYGIEPLEEHYSCMV 708

Query: 548  EVLSCAGMFREAEHFI 595
            EVL  AGMF E   FI
Sbjct: 709  EVLGRAGMFEEVLDFI 724



 Score = 83.2 bits (204), Expect = 6e-15
 Identities = 47/153 (30%), Positives = 78/153 (50%)
 Frame = +2

Query: 11  ISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAY 190
           + W +++  + K    E  L++F  +       D  + S VL +C  L   + G QAH Y
Sbjct: 188 VGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLECWDFGTQAHCY 247

Query: 191 ITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSEA 370
           I K G  +   + N+L++ Y+KCG LE     F+ + EKN  SW + I+ +V + H  EA
Sbjct: 248 IIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEA 307

Query: 371 ISQFVKMIRKGKSPDCSTFLSVLKACGQMGLID 469
           +  F  ++ +    D  + LS+LKA   +G +D
Sbjct: 308 LRIFQILMEEVSQCDDFSLLSILKAVSGLGHLD 340



 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
 Frame = +2

Query: 131 VLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKN 310
           VL +CG +  L+ G   H  + K+  + D  + NAL++MY  CGALE A   F  + + +
Sbjct: 127 VLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVFGGIDKPD 186

Query: 311 SASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFT 490
              W+SI+S +V +    E +  F  M+  G  PD   F  VL AC  +   D   +   
Sbjct: 187 LVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLECWDFGTQAHC 246

Query: 491 SMIE------VYKINPSAEVYSSMAEVLSCAGMFREAEHFIE 598
            +I+      +Y  N   + Y+   ++    GM R   H  E
Sbjct: 247 YIIKMGFDSCLYLENSLMDFYAKCGDL---EGMRRVFSHMSE 285


>ref|XP_002269762.3| PREDICTED: pentatricopeptide repeat-containing protein At4g13650
            [Vitis vinifera]
          Length = 957

 Score =  203 bits (516), Expect = 5e-57
 Identities = 108/196 (55%), Positives = 136/196 (69%)
 Frame = +2

Query: 8    EISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHA 187
            EISW+ LI+A   AE++E   K+  +IQ ++ +LD  SA  +  SC + VLLN G QAHA
Sbjct: 556  EISWNFLIRACLGAEDYEIIHKLLWRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQAHA 615

Query: 188  YITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSE 367
            Y+TKRGL++   ++N+LI MYS CG  + AV+AFN +PEK++ SWTSI+SA V+H HPSE
Sbjct: 616  YMTKRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSE 675

Query: 368  AISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSSMA 547
            A++   +M  K K  D STF SVL AC QMGL+DEAFRLF SM EVY I P  E YS M 
Sbjct: 676  ALNLISQMRWKNKPADQSTFRSVLNACAQMGLVDEAFRLFFSMKEVYGIEPLEEHYSCMV 735

Query: 548  EVLSCAGMFREAEHFI 595
            EVL  AGMF E   FI
Sbjct: 736  EVLGRAGMFEEVLDFI 751



 Score = 83.2 bits (204), Expect = 6e-15
 Identities = 47/153 (30%), Positives = 78/153 (50%)
 Frame = +2

Query: 11  ISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAY 190
           + W +++  + K    E  L++F  +       D  + S VL +C  L   + G QAH Y
Sbjct: 180 VGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLECWDFGTQAHCY 239

Query: 191 ITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSEA 370
           I K G  +   + N+L++ Y+KCG LE     F+ + EKN  SW + I+ +V + H  EA
Sbjct: 240 IIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEA 299

Query: 371 ISQFVKMIRKGKSPDCSTFLSVLKACGQMGLID 469
           +  F  ++ +    D  + LS+LKA   +G +D
Sbjct: 300 LRIFQILMEEVSQCDDFSLLSILKAVSGLGHLD 332



 Score = 75.1 bits (183), Expect = 4e-12
 Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
 Frame = +2

Query: 131 VLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKN 310
           VL +CG +  L+ G   H  + K+  + D  + NAL++MY  CGALE A   F  + + +
Sbjct: 119 VLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVFGGIDKPD 178

Query: 311 SASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFT 490
              W+SI+S +V +    E +  F  M+  G  PD   F  VL AC  +   D   +   
Sbjct: 179 LVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLECWDFGTQAHC 238

Query: 491 SMIE------VYKINPSAEVYSSMAEVLSCAGMFREAEHFIE 598
            +I+      +Y  N   + Y+   ++    GM R   H  E
Sbjct: 239 YIIKMGFDSCLYLENSLMDFYAKCGDL---EGMRRVFSHMSE 277



 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 37/106 (34%), Positives = 58/106 (54%)
 Frame = +2

Query: 131 VLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKN 310
           +L  C     L +G   H+ I K  L +D  + ++LI+MYSKCG  E A   F ++ + +
Sbjct: 396 LLKWCSLESSLESGKMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAKRVFTRVEQPD 455

Query: 311 SASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKAC 448
           +A W+++IS H  +   +EA+  F KM   G   +  TF SV+ AC
Sbjct: 456 TAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILAC 501


>ref|XP_008645746.1| pentatricopeptide repeat-containing protein At1g03540 [Zea mays]
 gb|AQK71479.1| Pentatricopeptide repeat-containing protein [Zea mays]
          Length = 798

 Score =  197 bits (501), Expect = 2e-55
 Identities = 99/202 (49%), Positives = 139/202 (68%)
 Frame = +2

Query: 2    SEEISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQA 181
            + ++SW TL+++  + + H G + + H IQ+   +LD  +A  +L+SCG L LL  G+QA
Sbjct: 559  NRDVSWGTLVESLSQVDHHVGIVNLLHVIQRCGANLDCHTARLILSSCGKLGLLEEGLQA 618

Query: 182  HAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHP 361
            HAY+TKRGL +    N+ LI+MYS  G+L HA +AFN +P K+++SW SI++A+V++  P
Sbjct: 619  HAYMTKRGLASSACTNSYLIDMYSSVGSLRHASDAFNYMPAKDASSWASIVAANVENGCP 678

Query: 362  SEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSS 541
              AI  F +M  K + P    FLSVLKAC + GL+ EAFR F SM EVYKI PS E YS 
Sbjct: 679  ETAIRLFSQMEEKCR-PTPEAFLSVLKACARTGLVSEAFRFFVSMTEVYKIQPSEEHYSH 737

Query: 542  MAEVLSCAGMFREAEHFIETAI 607
            M +VLS AGMF+EAEHFI++ +
Sbjct: 738  MIQVLSRAGMFKEAEHFIDSVV 759



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
 Frame = +2

Query: 11  ISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAY 190
           ++W TL+  +         L++   +       D    S  L +C  +  L  G Q H  
Sbjct: 81  VAWTTLMSGYATHGPASEALELLLCMLGLLVRPDAFVFSVALRACAAVGSLRLGRQLHGA 140

Query: 191 ITKRGLL-TDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSE 367
           + K G +  D  + N L+ MYS C +L  A + F  +   +  SWTS++SA+ ++   +E
Sbjct: 141 VAKLGYVGVDLFVANGLVTMYSSCQSLPCAEKVFGSIASPDLVSWTSMLSAYTENGRDAE 200

Query: 368 AISQFVKMIRKGKSPDCSTFLSVLKACGQMG 460
           A+  F++M R G + D  T    L+A   +G
Sbjct: 201 ALVLFMEMARGGVACDAFTLSVALRAASSLG 231



 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 36/118 (30%), Positives = 62/118 (52%)
 Frame = +2

Query: 107 LDHKSASFVLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEA 286
           LD    +  L SC + + L AG   HA I K  +  D  + ++L++MY+KCGALE +   
Sbjct: 393 LDQFIVASSLKSCASGLDLLAGRMLHACILKSDMNPDSFVTSSLLDMYAKCGALEESNLL 452

Query: 287 FNQLPEKNSASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMG 460
           F++     +A W++ IS +  +     A+  F +M  +   P+  T+ ++L AC  +G
Sbjct: 453 FSRTKNPGTAEWSAAISGNCLNGQYGRAVQLFRRMQSEHVQPNEFTYTAILTACMALG 510


>gb|PPD93643.1| hypothetical protein GOBAR_DD09431 [Gossypium barbadense]
          Length = 563

 Score =  181 bits (459), Expect = 1e-50
 Identities = 98/200 (49%), Positives = 124/200 (62%)
 Frame = +2

Query: 8   EISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHA 187
           EISW+ LIQA  KA ++E   K   +IQ  + +L+  S   +  SC + VLLN G+QA A
Sbjct: 251 EISWNLLIQASLKANDYEMIHKFLGRIQSCFGYLEPISVCDIFRSCSSPVLLNMGMQAQA 310

Query: 188 YITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSE 367
           Y+TKRGLL+     N LI MYS CG +  A   F  +PEK+S  WTSIISA V+H HPSE
Sbjct: 311 YMTKRGLLSHPTSGNGLIQMYSGCGKIAEADLVFESMPEKSSPCWTSIISAKVEHGHPSE 370

Query: 368 AISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSSMA 547
           A++ F KM R+ K  D ST  S+LKAC QMG +DEA  L  SM  VY + PS E YS + 
Sbjct: 371 ALALFNKMRRRNKLVDSSTLKSILKACSQMGRVDEARSLLMSMEVVYGVKPSEEHYSCVI 430

Query: 548 EVLSCAGMFREAEHFIETAI 607
           E  + AGM  E E+FI   +
Sbjct: 431 EAFTRAGMLEELENFINEVV 450



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
 Frame = +2

Query: 131 VLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKN 310
           +L  C  L  L+AG   H+   K  + +D  + +ALI+MYSKCG  E A+  F ++    
Sbjct: 91  MLKWCSLLSNLDAGKVFHSLANKLAVDSDPYVISALIDMYSKCGVPEAALRVFKRVENPG 150

Query: 311 SASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFT 490
           + +W+++IS    +    EA++ F KM   G   +  T  SV+ AC  +G + +   L  
Sbjct: 151 TVTWSALISGLSWNGWFVEALTCFNKMQLNGIEANEFTLTSVILACVALGDLRKGRELHC 210

Query: 491 SMIE------VYKINPSAEVYSSMAE 550
            +++      V  +N    +YS +++
Sbjct: 211 KILKTCYESNVSIVNMLINLYSELSD 236


>ref|XP_012476600.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330 [Gossypium raimondii]
 gb|KJB09042.1| hypothetical protein B456_001G121000 [Gossypium raimondii]
          Length = 976

 Score =  182 bits (461), Expect = 2e-49
 Identities = 98/200 (49%), Positives = 125/200 (62%)
 Frame = +2

Query: 8    EISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHA 187
            EISW+ LIQA  KA ++E   K+  +IQ  + +L+  S   +  SC + VLLN G+QA A
Sbjct: 579  EISWNLLIQASLKANDYEMIHKLLGRIQSCFGYLEPISVCDIFRSCSSPVLLNMGMQAQA 638

Query: 188  YITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPSE 367
            Y+TKRGLL+     N LI MYS CG +  A   F  +PEK+S  WTSIISA V+H HPSE
Sbjct: 639  YMTKRGLLSHPTSGNGLIQMYSGCGQIAEADLVFESMPEKSSPCWTSIISAKVEHGHPSE 698

Query: 368  AISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIEVYKINPSAEVYSSMA 547
            A++ F KM R+ K  D ST  S+LKAC QMG +DEA  L  SM  VY + PS E YS + 
Sbjct: 699  ALTLFNKMRRRNKLVDSSTLKSILKACSQMGRVDEARSLLMSMEVVYGVKPSEEHYSCVI 758

Query: 548  EVLSCAGMFREAEHFIETAI 607
            E  + AGM  E E+FI   +
Sbjct: 759  EAFTRAGMLEELENFINEVV 778



 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
 Frame = +2

Query: 11  ISWDTLIQAFGKAEEHEGTLKVFHKI------QQNYWHLDHKSASFVLNSCGTLVLLNAG 172
           ISW  L+  + K       L +F ++       +     D    + VL SCG +  L  G
Sbjct: 92  ISWTILMSGYAKHGPSTEALALFKEMLSTGDNHKTRLRPDSYVYAVVLRSCGEMRELGFG 151

Query: 173 IQAHAYITKRG-LLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVD 349
              H  + K+G    D  + N+L+NMYS CG LE AV  F+ + +    +W+S++SA+V 
Sbjct: 152 KGVHGQVLKKGEAFLDGFLENSLVNMYSSCGQLEDAVLIFDGIEKPGLVAWSSMLSAYVK 211

Query: 350 HDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFTSMIE 502
           +    E +S F+ M+ KG   D   F  V+KAC  +  ++   ++   M++
Sbjct: 212 NGFEKEGLSVFLDMVSKGIKLDAFVFSMVIKACSNLEELNLGIQVHGLMVK 262



 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
 Frame = +2

Query: 11  ISWDTLIQAFGKAEEHEGTLKVFHKIQQNYWHLDHKSASFVLNSCGTLVLLNAGIQAHAY 190
           ++W +++ A+ K    +  L VF  +      LD    S V+ +C  L  LN GIQ H  
Sbjct: 200 VAWSSMLSAYVKNGFEKEGLSVFLDMVSKGIKLDAFVFSMVIKACSNLEELNLGIQVHGL 259

Query: 191 ITKRGLLTDQKM--NNALINMYSKCGALEHAVEAFNQLPEKNSASWTSIISAHVDHDHPS 364
           + K+G      +  +N+L++ Y+KC  L+   + F+QL EK+  SW ++I  +V + +  
Sbjct: 260 MVKKGFGKGSCLFLDNSLMDFYAKCKDLKGLRKVFDQLHEKDLVSWNTLIMGYVHNFYYF 319

Query: 365 EAISQFVKMIRKGKSPDCSTFLSVLKACGQM 457
           EA+  F  ++      D  T  S+LKA   +
Sbjct: 320 EALRNFRVLMHDICYCDDFTITSILKAISSL 350



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
 Frame = +2

Query: 131 VLNSCGTLVLLNAGIQAHAYITKRGLLTDQKMNNALINMYSKCGALEHAVEAFNQLPEKN 310
           +L  C  L  L+AG   H+   K  + +D  + +ALI+MYSKCG  E A+  F ++    
Sbjct: 419 MLKWCSLLSNLDAGKVFHSLANKLAVDSDPYVISALIDMYSKCGVPEAALRVFERVENPG 478

Query: 311 SASWTSIISAHVDHDHPSEAISQFVKMIRKGKSPDCSTFLSVLKACGQMGLIDEAFRLFT 490
           + +W+++IS    +    EA++ F KM   G   +  T  SV+ AC  +G + +   L  
Sbjct: 479 TVTWSALISGLSWNGWFVEALTCFNKMQLNGIEANEFTLTSVILACVALGDLRKGRELHC 538

Query: 491 SMIE------VYKINPSAEVYSSMAE 550
            +++      V  +N    +YS +++
Sbjct: 539 KILKTCYESNVSIVNMLINLYSELSD 564