BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00008744
         (860 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020672351.1| pentatricopeptide repeat-containing protein ...   234   2e-67
ref|XP_020581196.1| pentatricopeptide repeat-containing protein ...   230   6e-66
gb|OAY69128.1| Pentatricopeptide repeat-containing protein, chlo...   229   3e-65
ref|XP_020101914.1| pentatricopeptide repeat-containing protein ...   228   5e-65
ref|XP_010914579.1| PREDICTED: pentatricopeptide repeat-containi...   226   1e-64
ref|XP_008809274.2| PREDICTED: pentatricopeptide repeat-containi...   223   1e-63
gb|PKA51558.1| Pentatricopeptide repeat-containing protein [Apos...   221   2e-62
ref|XP_009381720.1| PREDICTED: pentatricopeptide repeat-containi...   218   2e-61
ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containi...   213   9e-60
ref|XP_015620361.1| PREDICTED: pentatricopeptide repeat-containi...   211   5e-59
ref|XP_020164531.1| pentatricopeptide repeat-containing protein ...   209   3e-58
ref|XP_020254341.1| pentatricopeptide repeat-containing protein ...   207   5e-58
ref|XP_022680713.1| pentatricopeptide repeat-containing protein ...   207   2e-57
gb|OEL23565.1| Pentatricopeptide repeat-containing protein, part...   204   3e-57
gb|OEL23564.1| Pentatricopeptide repeat-containing protein [Dich...   204   3e-57
ref|XP_002442324.2| pentatricopeptide repeat-containing protein ...   204   2e-56
ref|XP_008660445.1| pentatricopeptide repeat-containing protein ...   202   2e-55
gb|PAN21386.1| hypothetical protein PAHAL_I04576 [Panicum hallii]     200   6e-55
ref|XP_006664642.1| PREDICTED: pentatricopeptide repeat-containi...   198   9e-55
gb|KMZ59111.1| putative Pentatricopeptide repeat-containing prot...   189   5e-51

>ref|XP_020672351.1| pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Dendrobium catenatum]
 gb|PKU68253.1| Pentatricopeptide repeat-containing protein [Dendrobium catenatum]
          Length = 844

 Score =  234 bits (597), Expect = 2e-67
 Identities = 134/258 (51%), Positives = 165/258 (63%), Gaps = 9/258 (3%)
 Frame = -1

Query: 749 DFRRARSTRTISKRNXXXXXXXXXXXXXXXSGFLTL---LLDSQPHHRPTLQPSL----- 594
           +FRR+R+T+ ISKRN               +  + +   LL S       L+  L     
Sbjct: 81  EFRRSRTTKVISKRNLSSPRTYFSQTRSASAAAVDITARLLCSSLDDIQGLKGILGSFQH 140

Query: 593 -LSVPDDHCFILHSLAELNRPGXXXXXXXXXXXXXXXSLPSMRNFKEKGKLLTAAISCLG 417
            L +P+D+CF+LH L      G               S+P MRN  EKGKLLTA I  LG
Sbjct: 141 KLKIPEDYCFVLHEL------GNRDKCPPKALAFFHASIPLMRNSTEKGKLLTAVIGILG 194

Query: 416 KLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNVI 237
           KLGR D+ARQ+FD  L+ GFG+TVYA+SAL+SAYARNG   EA++VF  M+A G++PN I
Sbjct: 195 KLGRHDLARQVFDFGLSQGFGNTVYAYSALISAYARNGLSSEAMSVFSLMKASGVRPNNI 254

Query: 236 SYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFEE 57
           SYNAVIDAC KG  D+E  VGFFREM+   + PD KTFNSLLAGCS AG+L+ AR+LF+E
Sbjct: 255 SYNAVIDACGKGGVDLEITVGFFREMLQNGICPDRKTFNSLLAGCSHAGRLEDARILFDE 314

Query: 56  MTRLGIGRDIYTYNTVID 3
           M  LGIGRDIYTYNT ID
Sbjct: 315 MIDLGIGRDIYTYNTFID 332



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 42/148 (28%), Positives = 76/148 (51%)
 Frame = -1

Query: 449 KLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFES 270
           K   + ++     GR + AR LFD  +  G G  +Y ++  +    + G    AV V   
Sbjct: 290 KTFNSLLAGCSHAGRLEDARILFDEMIDLGIGRDIYTYNTFIDVLCKGGNMKFAVEVIPD 349

Query: 269 MRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAG 90
           M +  ++PNV++Y+ ++D   K     E A+  + EM    ++ D   +N+LL+   ++G
Sbjct: 350 MLSSYIQPNVVTYSTLMDGYAKLERHDE-ALNLYMEMKSMGIQLDRVCYNTLLSIYVKSG 408

Query: 89  QLDYARVLFEEMTRLGIGRDIYTYNTVI 6
           + +    + EEM  +GI +DI TYN++I
Sbjct: 409 RYEDITRVCEEMEVIGIDKDIITYNSLI 436



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 41/143 (28%), Positives = 70/143 (48%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I  L K G    A ++    L+      V  +S L+  YA+  R  EA+ ++  M++ G+
Sbjct: 331 IDVLCKGGNMKFAVEVIPDMLSSYIQPNVVTYSTLMDGYAKLERHDEALNLYMEMKSMGI 390

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYAR 72
           + + + YN ++   VK SG  E       EM V  +  D  T+NSL+ G  + G+ D   
Sbjct: 391 QLDRVCYNTLLSIYVK-SGRYEDITRVCEEMEVIGIDKDIITYNSLITGYGKQGRFDIVS 449

Query: 71  VLFEEMTRLGIGRDIYTYNTVID 3
            L  +M   G+  ++ TY+T++D
Sbjct: 450 YLIRDMREKGVASNVLTYSTLMD 472



 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 36/143 (25%), Positives = 72/143 (50%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           +S   K GR +   ++ +     G    +  +++L++ Y + GR      +   MR +G+
Sbjct: 401 LSIYVKSGRYEDITRVCEEMEVIGIDKDIITYNSLITGYGKQGRFDIVSYLIRDMREKGV 460

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYAR 72
             NV++Y+ ++D   K +G  E A   F +     ++ D   ++S +   ++ G +  A 
Sbjct: 461 ASNVLTYSTLMDIYSK-AGMYEDAANVFFDFKESGLKADVVLYSSFIDVLAKNGLVKCAV 519

Query: 71  VLFEEMTRLGIGRDIYTYNTVID 3
            L +EM ++GI  ++ TYNT+ID
Sbjct: 520 WLLDEMQQIGIEPNVVTYNTIID 542


>ref|XP_020581196.1| pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Phalaenopsis equestris]
          Length = 845

 Score =  230 bits (586), Expect = 6e-66
 Identities = 130/258 (50%), Positives = 160/258 (62%), Gaps = 9/258 (3%)
 Frame = -1

Query: 749 DFRRARSTRTISKRNXXXXXXXXXXXXXXXSGFLTL---LLDSQPHHRPTLQPSL----- 594
           +FR+ R+T+ ISKRN                    +   LL S P     L  +      
Sbjct: 82  EFRKNRTTKVISKRNLSSPRPHFSQQRSASLAAADITARLLRSSPDDLQGLVSTFSSSQQ 141

Query: 593 -LSVPDDHCFILHSLAELNRPGXXXXXXXXXXXXXXXSLPSMRNFKEKGKLLTAAISCLG 417
            L +P+D+CF+LH L      G               S+P MRNF EKGKLLTAAI  LG
Sbjct: 142 KLKIPEDYCFVLHEL------GNRDKCAPKVLAFFFSSIPLMRNFTEKGKLLTAAIGVLG 195

Query: 416 KLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNVI 237
           K+GR D+AR++FD  +  GFG+TVYA+SAL+SAYARNG   EAV+V   M+A G++PN I
Sbjct: 196 KMGRHDLARKVFDFGVARGFGNTVYAYSALISAYARNGLSSEAVSVLTLMKASGVRPNNI 255

Query: 236 SYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFEE 57
           SYNAVIDAC KG  D E  VGF+REM+   + PD KTFNSLLAGCS  G+L+ AR+LF+E
Sbjct: 256 SYNAVIDACGKGGVDFEVTVGFYREMLQDGILPDRKTFNSLLAGCSHVGRLEDARILFDE 315

Query: 56  MTRLGIGRDIYTYNTVID 3
           M  LGIGRDIYTYNT ID
Sbjct: 316 MIDLGIGRDIYTYNTFID 333



 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 40/143 (27%), Positives = 70/143 (48%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I  L K G  + A  +    + +     V  +S L+  YA+  R  EA+ ++  M++ G+
Sbjct: 332 IDVLCKGGNMEFAVDVIPDMVANNVLPNVVTYSTLMDGYAKLDRHEEALNLYMEMKSLGI 391

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYAR 72
           + + + YN ++   VK S   E   G   EM V  +  D  T+NSL+ G  + G+ D   
Sbjct: 392 QLDRVCYNTLLSIFVK-SARYEEITGVCEEMEVMSIEKDIITYNSLITGYGKQGRFDVVS 450

Query: 71  VLFEEMTRLGIGRDIYTYNTVID 3
            L  +M   G+  ++ TY+T++D
Sbjct: 451 YLIRDMRERGVASNVLTYSTLMD 473


>gb|OAY69128.1| Pentatricopeptide repeat-containing protein, chloroplastic [Ananas
           comosus]
          Length = 890

 Score =  229 bits (583), Expect = 3e-65
 Identities = 130/260 (50%), Positives = 162/260 (62%), Gaps = 11/260 (4%)
 Frame = -1

Query: 749 DFRRARSTRTISKRNXXXXXXXXXXXXXXXSGF------LTLLLDSQPHHRPTLQP---- 600
           DFRR+R+TR +SKRN               +        L  +L   P  R         
Sbjct: 123 DFRRSRTTRVVSKRNLASPKAARDHHSRAAAASPAAASCLAQILQLGPDARAVPAALAAF 182

Query: 599 -SLLSVPDDHCFILHSLAELNRPGXXXXXXXXXXXXXXXSLPSMRNFKEKGKLLTAAISC 423
              L+ PDD+CF+LH L + ++                 S+P MR   E+GKLLTAAI  
Sbjct: 183 RGALAAPDDYCFVLHELGDRDK------HPPKALAVFHSSMPLMRGPVEQGKLLTAAIGG 236

Query: 422 LGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPN 243
           LGK+GRPD+ARQ+FDA    G+G+TV+AHSAL+SAYAR+G   EA+AV +SM++ GLKP 
Sbjct: 237 LGKMGRPDLARQVFDAGFAAGYGNTVFAHSALISAYARSGLAAEAMAVLDSMKSHGLKPT 296

Query: 242 VISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLF 63
            ISYNAVIDAC KG  D++  +GFFREMI   + PD KTFNSLLA CSRAG L+ AR +F
Sbjct: 297 TISYNAVIDACGKGGVDLQLTLGFFREMIQHGLCPDRKTFNSLLAACSRAGHLEDARRVF 356

Query: 62  EEMTRLGIGRDIYTYNTVID 3
           +EM  LGIGRDIYTYNT ID
Sbjct: 357 DEMIHLGIGRDIYTYNTFID 376



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 38/149 (25%), Positives = 78/149 (52%)
 Frame = -1

Query: 449 KLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFES 270
           K   + ++   + G  + AR++FD  +  G G  +Y ++  + A  + G    AV V   
Sbjct: 334 KTFNSLLAACSRAGHLEDARRVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAVRVLSD 393

Query: 269 MRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAG 90
           M ++ ++PNV++Y+ +ID   K     + A+  + ++    +R D   +N+LL+   + G
Sbjct: 394 MESKNVRPNVVTYSTLIDGYSK-LEQFDEALNLYAKVKSLGIRLDRVCYNTLLSIYVKTG 452

Query: 89  QLDYARVLFEEMTRLGIGRDIYTYNTVID 3
           + +    + EEM  +G+ +D  TYN++I+
Sbjct: 453 KYEEIARICEEMDVMGVDKDTVTYNSLIN 481



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 39/117 (33%), Positives = 68/117 (58%)
 Frame = -1

Query: 353 DTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNVISYNAVIDACVKGSGDVEAAVG 174
           DTV  +++L++ Y + G+      + + MR RG+ P+V++Y+ +ID   K +G    A  
Sbjct: 472 DTV-TYNSLINGYGKQGKFDVVAFLIQDMRQRGVAPSVLTYSTLIDIYSK-AGMYGDAAN 529

Query: 173 FFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFEEMTRLGIGRDIYTYNTVID 3
            F E     +RPD   ++S +   ++ G ++ A  L +EMTR+GI  ++ TYNT+ID
Sbjct: 530 VFVEFKESGLRPDVVLYSSFIDTLAKNGLVECAVSLLDEMTRMGIEPNVVTYNTIID 586



 Score = 61.2 bits (147), Expect = 9e-07
 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I+  GK G+ DV   L       G   +V  +S L+  Y++ G  G+A  VF   +  GL
Sbjct: 480 INGYGKQGKFDVVAFLIQDMRQRGVAPSVLTYSTLIDIYSKAGMYGDAANVFVEFKESGL 539

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLL--AGCSRA 93
           +P+V+ Y++ ID   K +G VE AV    EM    + P+  T+N+++   G SRA
Sbjct: 540 RPDVVLYSSFIDTLAK-NGLVECAVSLLDEMTRMGIEPNVVTYNTIIDAFGKSRA 593


>ref|XP_020101914.1| pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Ananas comosus]
 ref|XP_020101915.1| pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Ananas comosus]
 ref|XP_020101916.1| pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Ananas comosus]
          Length = 885

 Score =  228 bits (581), Expect = 5e-65
 Identities = 130/260 (50%), Positives = 161/260 (61%), Gaps = 11/260 (4%)
 Frame = -1

Query: 749 DFRRARSTRTISKRNXXXXXXXXXXXXXXXSGF------LTLLLDSQPHHRPTLQP---- 600
           DFRR+R+TR +SKRN               +        L  +L   P  R         
Sbjct: 118 DFRRSRTTRVVSKRNLASPKAARDHHSRAAAASPAAASCLAQILQLGPDARAVPAALAAF 177

Query: 599 -SLLSVPDDHCFILHSLAELNRPGXXXXXXXXXXXXXXXSLPSMRNFKEKGKLLTAAISC 423
              L+ PDD+CF+LH L + ++                 S+P MR   E+GKLLTAAI  
Sbjct: 178 RGALAAPDDYCFVLHELGDRDK------HPPKALAVFHSSMPLMRGPVEQGKLLTAAIGG 231

Query: 422 LGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPN 243
           LGK+GRPD+ARQ+FDA    G+G+TV+AHSAL+SAYAR+G   EA+AV  SM++ GLKP 
Sbjct: 232 LGKMGRPDLARQVFDAGFAAGYGNTVFAHSALISAYARSGLAAEAMAVLNSMKSHGLKPT 291

Query: 242 VISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLF 63
            ISYNAVIDAC KG  D++  +GFFREMI   + PD KTFNSLLA CSRAG L+ AR +F
Sbjct: 292 TISYNAVIDACGKGGVDLQLTLGFFREMIQHGLCPDRKTFNSLLAACSRAGHLEDARRVF 351

Query: 62  EEMTRLGIGRDIYTYNTVID 3
           +EM  LGIGRDIYTYNT ID
Sbjct: 352 DEMIHLGIGRDIYTYNTFID 371



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 38/149 (25%), Positives = 78/149 (52%)
 Frame = -1

Query: 449 KLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFES 270
           K   + ++   + G  + AR++FD  +  G G  +Y ++  + A  + G    AV V   
Sbjct: 329 KTFNSLLAACSRAGHLEDARRVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAVRVLSD 388

Query: 269 MRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAG 90
           M ++ ++PNV++Y+ +ID   K     + A+  + ++    +R D   +N+LL+   + G
Sbjct: 389 MESKNVRPNVVTYSTLIDGYSK-LEQFDEALNLYAKVKSLGIRLDRVCYNTLLSIYVKTG 447

Query: 89  QLDYARVLFEEMTRLGIGRDIYTYNTVID 3
           + +    + EEM  +G+ +D  TYN++I+
Sbjct: 448 KYEEIARICEEMDVMGVDKDTVTYNSLIN 476



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 39/117 (33%), Positives = 68/117 (58%)
 Frame = -1

Query: 353 DTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNVISYNAVIDACVKGSGDVEAAVG 174
           DTV  +++L++ Y + G+      + + MR RG+ P+V++Y+ +ID   K +G    A  
Sbjct: 467 DTV-TYNSLINGYGKQGKFDVVAFLIQDMRQRGVAPSVLTYSTLIDIYSK-AGMYGDAAN 524

Query: 173 FFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFEEMTRLGIGRDIYTYNTVID 3
            F E     +RPD   ++S +   ++ G ++ A  L +EMTR+GI  ++ TYNT+ID
Sbjct: 525 VFVEFKESGLRPDVVLYSSFIDTLAKNGLVECAVSLLDEMTRMGIEPNVVTYNTIID 581



 Score = 61.2 bits (147), Expect = 9e-07
 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I+  GK G+ DV   L       G   +V  +S L+  Y++ G  G+A  VF   +  GL
Sbjct: 475 INGYGKQGKFDVVAFLIQDMRQRGVAPSVLTYSTLIDIYSKAGMYGDAANVFVEFKESGL 534

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLL--AGCSRA 93
           +P+V+ Y++ ID   K +G VE AV    EM    + P+  T+N+++   G SRA
Sbjct: 535 RPDVVLYSSFIDTLAK-NGLVECAVSLLDEMTRMGIEPNVVTYNTIIDAFGKSRA 588


>ref|XP_010914579.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Elaeis guineensis]
          Length = 862

 Score =  226 bits (577), Expect = 1e-64
 Identities = 127/258 (49%), Positives = 168/258 (65%), Gaps = 9/258 (3%)
 Frame = -1

Query: 749 DFRRARSTRTISKRNXXXXXXXXXXXXXXXSGF---LTLLLDSQPHHRP------TLQPS 597
           +FRR RSTR ISKRN                     L  +L S P+ R       + +P+
Sbjct: 99  EFRRTRSTRVISKRNLSSAKPSHDNARTASPAAAHCLAQILRSPPNDRALVTILSSFRPA 158

Query: 596 LLSVPDDHCFILHSLAELNRPGXXXXXXXXXXXXXXXSLPSMRNFKEKGKLLTAAISCLG 417
           L ++P+D+CFILH L + ++                 ++P MR+  E+GKLLTAAI  LG
Sbjct: 159 L-AIPEDYCFILHELGDRDK------CPPKALRFFHSAMPLMRSRIEQGKLLTAAICGLG 211

Query: 416 KLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNVI 237
           K+GRP++ARQ+FD  +   +G+TV+A+S+L+SAYAR+G   EA+ VFESM+A GL+P  I
Sbjct: 212 KMGRPELARQVFDVGVARAYGNTVFAYSSLISAYARSGLAAEAMGVFESMKAAGLRPTTI 271

Query: 236 SYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFEE 57
           SYNAVIDAC KG  D++  + FFREM+   + PD KTFNSLLA CSRAG L+ ARV+F+E
Sbjct: 272 SYNAVIDACGKGGVDLQFTLEFFREMLHDGLCPDRKTFNSLLAACSRAGHLEDARVMFDE 331

Query: 56  MTRLGIGRDIYTYNTVID 3
           M RLG+GRDIYTYNT ID
Sbjct: 332 MIRLGMGRDIYTYNTFID 349



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 39/143 (27%), Positives = 74/143 (51%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           +S   K GR +   ++ +     G       +++L++ Y + GR      + + MR RG+
Sbjct: 418 LSIYVKTGRFEEIARVCEEMNVVGVDKDTVTYNSLINGYGKQGRLDVVAYLVQDMRERGV 477

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYAR 72
            P+V++Y+ ++D   K +G    A   F E     ++ D   ++S +   ++ G ++ A 
Sbjct: 478 APSVLTYSTLMDIYSK-AGMYGDAANVFLEFKESGLKADVVLYSSFIDTLAKNGLVECAV 536

Query: 71  VLFEEMTRLGIGRDIYTYNTVID 3
            L +EMTR+GI  ++ TYNT+ID
Sbjct: 537 WLLDEMTRVGIEPNVVTYNTIID 559



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 38/149 (25%), Positives = 75/149 (50%)
 Frame = -1

Query: 449 KLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFES 270
           K   + ++   + G  + AR +FD  +  G G  +Y ++  + A  + G    AV V   
Sbjct: 307 KTFNSLLAACSRAGHLEDARVMFDEMIRLGMGRDIYTYNTFIDAICKCGNMELAVQVMLD 366

Query: 269 MRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAG 90
           M    + PNV++Y+ ++D   K     + A+  + +M   K++ D   +N+LL+   + G
Sbjct: 367 MPTNNVCPNVVTYSTLMDGYSK-LEQFDEALKIYEKMKSLKIQLDRVCYNTLLSIYVKTG 425

Query: 89  QLDYARVLFEEMTRLGIGRDIYTYNTVID 3
           + +    + EEM  +G+ +D  TYN++I+
Sbjct: 426 RFEEIARVCEEMNVVGVDKDTVTYNSLIN 454



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 40/143 (27%), Positives = 73/143 (51%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I  + K G  ++A Q+     T+     V  +S L+  Y++  +  EA+ ++E M++  +
Sbjct: 348 IDAICKCGNMELAVQVMLDMPTNNVCPNVVTYSTLMDGYSKLEQFDEALKIYEKMKSLKI 407

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYAR 72
           + + + YN ++   VK +G  E       EM V  V  D  T+NSL+ G  + G+LD   
Sbjct: 408 QLDRVCYNTLLSIYVK-TGRFEEIARVCEEMNVVGVDKDTVTYNSLINGYGKQGRLDVVA 466

Query: 71  VLFEEMTRLGIGRDIYTYNTVID 3
            L ++M   G+   + TY+T++D
Sbjct: 467 YLVQDMRERGVAPSVLTYSTLMD 489



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
 Frame = -1

Query: 437 AAISCLGKLGRP-DVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRA 261
           A I   GK G       + F   L DG        ++L++A +R G   +A  +F+ M  
Sbjct: 275 AVIDACGKGGVDLQFTLEFFREMLHDGLCPDRKTFNSLLAACSRAGHLEDARVMFDEMIR 334

Query: 260 RGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLD 81
            G+  ++ +YN  IDA  K  G++E AV    +M    V P+  T+++L+ G S+  Q D
Sbjct: 335 LGMGRDIYTYNTFIDAICK-CGNMELAVQVMLDMPTNNVCPNVVTYSTLMDGYSKLEQFD 393

Query: 80  YARVLFEEMTRLGIGRDIYTYNTVI 6
            A  ++E+M  L I  D   YNT++
Sbjct: 394 EALKIYEKMKSLKIQLDRVCYNTLL 418



 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 39/125 (31%), Positives = 62/125 (49%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I+  GK GR DV   L       G   +V  +S L+  Y++ G  G+A  VF   +  GL
Sbjct: 453 INGYGKQGRLDVVAYLVQDMRERGVAPSVLTYSTLMDIYSKAGMYGDAANVFLEFKESGL 512

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYAR 72
           K +V+ Y++ ID   K +G VE AV    EM    + P+  T+N+++    +      +R
Sbjct: 513 KADVVLYSSFIDTLAK-NGLVECAVWLLDEMTRVGIEPNVVTYNTIIDAFGK------SR 565

Query: 71  VLFEE 57
           ++ EE
Sbjct: 566 IIVEE 570


>ref|XP_008809274.2| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic, partial [Phoenix dactylifera]
          Length = 766

 Score =  223 bits (567), Expect = 1e-63
 Identities = 118/221 (53%), Positives = 155/221 (70%), Gaps = 5/221 (2%)
 Frame = -1

Query: 650 LTLLLDSQPHHRPTLQ-----PSLLSVPDDHCFILHSLAELNRPGXXXXXXXXXXXXXXX 486
           L+ +L S P+ R          S L++P+D+CFILH L + ++                 
Sbjct: 39  LSQILRSPPNDRALANILSSFRSSLAIPEDYCFILHELGDRDK------CPPKALRFFHS 92

Query: 485 SLPSMRNFKEKGKLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARN 306
           ++P MR+  E+GKLLTAAI  LGK+GRP++ARQ+FDA +  G+G+TV+A+S+L+SAYAR+
Sbjct: 93  AMPLMRSRIEQGKLLTAAICGLGKMGRPELARQVFDAGVARGYGNTVFAYSSLISAYARS 152

Query: 305 GRPGEAVAVFESMRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKT 126
           G   EA  VFESM+A GL+P  ISYNAVIDAC KG  D++  +GFFREM+   + PD KT
Sbjct: 153 GLAAEATGVFESMKATGLRPTTISYNAVIDACGKGGVDLQFTLGFFREMLHDGLCPDRKT 212

Query: 125 FNSLLAGCSRAGQLDYARVLFEEMTRLGIGRDIYTYNTVID 3
           FNSLLA CSRAG L+ AR++F+EM RLGIGRDIYTYNT ID
Sbjct: 213 FNSLLAACSRAGHLEDARMMFDEMIRLGIGRDIYTYNTFID 253



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 39/149 (26%), Positives = 74/149 (49%)
 Frame = -1

Query: 449 KLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFES 270
           K   + ++   + G  + AR +FD  +  G G  +Y ++  + A  + G    AV V   
Sbjct: 211 KTFNSLLAACSRAGHLEDARMMFDEMIRLGIGRDIYTYNTFIDAICKCGNVELAVQVMLD 270

Query: 269 MRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAG 90
           M    + PNV++Y+ ++D   K     + A+  + +M   K+R D   +N+LL+   + G
Sbjct: 271 MPTNNVCPNVVTYSTLMDGYSK-LEQFDEALKIYEKMKSLKIRLDRVCYNTLLSIYVKTG 329

Query: 89  QLDYARVLFEEMTRLGIGRDIYTYNTVID 3
           +      + EEM  +G+ +D  TYN++I+
Sbjct: 330 RYGEIARVCEEMDVMGVDKDTVTYNSLIN 358



 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 40/143 (27%), Positives = 72/143 (50%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I  + K G  ++A Q+     T+     V  +S L+  Y++  +  EA+ ++E M++  +
Sbjct: 252 IDAICKCGNVELAVQVMLDMPTNNVCPNVVTYSTLMDGYSKLEQFDEALKIYEKMKSLKI 311

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYAR 72
           + + + YN ++   VK +G          EM V  V  D  T+NSL+ G  + G+LD   
Sbjct: 312 RLDRVCYNTLLSIYVK-TGRYGEIARVCEEMDVMGVDKDTVTYNSLINGYGKQGRLDIVA 370

Query: 71  VLFEEMTRLGIGRDIYTYNTVID 3
            L ++M   G+   + TY+T+ID
Sbjct: 371 YLIQDMRERGVAPSVLTYSTLID 393



 Score = 64.3 bits (155), Expect = 8e-08
 Identities = 37/117 (31%), Positives = 66/117 (56%)
 Frame = -1

Query: 353 DTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNVISYNAVIDACVKGSGDVEAAVG 174
           DTV  +++L++ Y + GR      + + MR RG+ P+V++Y+ +ID   K +G    A  
Sbjct: 349 DTV-TYNSLINGYGKQGRLDIVAYLIQDMRERGVAPSVLTYSTLIDIYSK-AGMYGDAAN 406

Query: 173 FFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFEEMTRLGIGRDIYTYNTVID 3
            F E     ++ D   ++S +   ++ G ++ A  L +EMTR GI  ++ T+NT+ID
Sbjct: 407 VFLEFKGSGLKADVVLYSSFIDTLAKNGLVECAVSLLDEMTRAGIEPNVVTFNTIID 463



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 39/125 (31%), Positives = 62/125 (49%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I+  GK GR D+   L       G   +V  +S L+  Y++ G  G+A  VF   +  GL
Sbjct: 357 INGYGKQGRLDIVAYLIQDMRERGVAPSVLTYSTLIDIYSKAGMYGDAANVFLEFKGSGL 416

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYAR 72
           K +V+ Y++ ID   K +G VE AV    EM    + P+  TFN+++    +      +R
Sbjct: 417 KADVVLYSSFIDTLAK-NGLVECAVSLLDEMTRAGIEPNVVTFNTIIDAFGK------SR 469

Query: 71  VLFEE 57
           ++ EE
Sbjct: 470 IIVEE 474



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
 Frame = -1

Query: 437 AAISCLGKLGRPDVARQL--FDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMR 264
           A I   GK G  D+   L  F   L DG        ++L++A +R G   +A  +F+ M 
Sbjct: 179 AVIDACGK-GGVDLQFTLGFFREMLHDGLCPDRKTFNSLLAACSRAGHLEDARMMFDEMI 237

Query: 263 ARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQL 84
             G+  ++ +YN  IDA  K  G+VE AV    +M    V P+  T+++L+ G S+  Q 
Sbjct: 238 RLGIGRDIYTYNTFIDAICK-CGNVELAVQVMLDMPTNNVCPNVVTYSTLMDGYSKLEQF 296

Query: 83  DYARVLFEEMTRLGIGRDIYTYNTVI 6
           D A  ++E+M  L I  D   YNT++
Sbjct: 297 DEALKIYEKMKSLKIRLDRVCYNTLL 322


>gb|PKA51558.1| Pentatricopeptide repeat-containing protein [Apostasia shenzhenica]
          Length = 840

 Score =  221 bits (562), Expect = 2e-62
 Identities = 127/259 (49%), Positives = 163/259 (62%), Gaps = 10/259 (3%)
 Frame = -1

Query: 749 DFRRARSTRTISKRNXXXXXXXXXXXXXXXSGFL----TLLLDSQPHHR------PTLQP 600
           DFRR R+T+ ISKRN                  +     LL  S   H        T Q 
Sbjct: 76  DFRRNRTTKVISKRNFCSPRPFYSQNRTASEAAVHLTSRLLCSSADDHLGLTGIFRTFQH 135

Query: 599 SLLSVPDDHCFILHSLAELNRPGXXXXXXXXXXXXXXXSLPSMRNFKEKGKLLTAAISCL 420
           + L +P+D+CF+LH L + ++                 S+P MR+  E+GKLLTAAI  L
Sbjct: 136 T-LRIPEDYCFVLHELGDRDK------CPPKALAFFHSSMPFMRDSTERGKLLTAAIVGL 188

Query: 419 GKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNV 240
           GK+GR D+ARQ+FD  L  G G+TVYA+SAL+SAYAR+G   EA++V  SM+A G++PN+
Sbjct: 189 GKMGRHDLARQVFDFGLVHGCGNTVYAYSALISAYARSGMSTEAMSVLSSMKASGIRPNI 248

Query: 239 ISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFE 60
           ISYN+VIDAC KG  D+E  V  FREM+   + PD KTFNSLLAGCSRAG+L+ AR+L +
Sbjct: 249 ISYNSVIDACGKGGVDLEITVRIFREMLRNGICPDRKTFNSLLAGCSRAGRLEDARILLD 308

Query: 59  EMTRLGIGRDIYTYNTVID 3
           EM  LGIGRDIYTYNT +D
Sbjct: 309 EMIDLGIGRDIYTYNTFVD 327



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 41/143 (28%), Positives = 75/143 (52%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           +S   K+GR +   ++ D     G       +++L++ Y + GR      + + MR +G+
Sbjct: 396 LSIYVKVGRYEEIARVCDEMEVMGIDKDTVTYNSLITGYGKQGRFDVVNCLIQDMREKGI 455

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYAR 72
            P+V++Y+ +ID   K +G    AV  F +     ++ D    +S +   S+ G ++ A 
Sbjct: 456 APSVLTYSTLIDIYSK-AGMYGDAVNVFLDFKESGLKADVVLISSFIDMLSKNGLVECAV 514

Query: 71  VLFEEMTRLGIGRDIYTYNTVID 3
            L +EMTR+GI  ++ TYNT+ID
Sbjct: 515 WLLDEMTRIGIEPNVVTYNTIID 537



 Score = 64.3 bits (155), Expect = 8e-08
 Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 34/183 (18%)
 Frame = -1

Query: 449 KLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFES 270
           K   + ++   + GR + AR L D  +  G G  +Y ++  V    + G    A+ V   
Sbjct: 285 KTFNSLLAGCSRAGRLEDARILLDEMIDLGIGRDIYTYNTFVDVLCKGGNMELAIEVLSD 344

Query: 269 MRARGLKPNVISYNAVIDACVKGSGDVEAA---------------------------VGF 171
           M A  + PNV++Y+ +ID   K     EA                            VG 
Sbjct: 345 MVANDVYPNVVTYSTLIDGYTKLERYEEALNLYMETRSLGIQLDRVCYNTLLSIYVKVGR 404

Query: 170 FRE-------MIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFEEMTRLGIGRDIYTYNT 12
           + E       M V  +  D  T+NSL+ G  + G+ D    L ++M   GI   + TY+T
Sbjct: 405 YEEIARVCDEMEVMGIDKDTVTYNSLITGYGKQGRFDVVNCLIQDMREKGIAPSVLTYST 464

Query: 11  VID 3
           +ID
Sbjct: 465 LID 467



 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 37/113 (32%), Positives = 58/113 (51%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I+  GK GR DV   L       G   +V  +S L+  Y++ G  G+AV VF   +  GL
Sbjct: 431 ITGYGKQGRFDVVNCLIQDMREKGIAPSVLTYSTLIDIYSKAGMYGDAVNVFLDFKESGL 490

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRA 93
           K +V+  ++ ID   K +G VE AV    EM    + P+  T+N+++ G  ++
Sbjct: 491 KADVVLISSFIDMLSK-NGLVECAVWLLDEMTRIGIEPNVVTYNTIIDGFGKS 542


>ref|XP_009381720.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 874

 Score =  218 bits (556), Expect = 2e-61
 Identities = 124/257 (48%), Positives = 159/257 (61%), Gaps = 8/257 (3%)
 Frame = -1

Query: 749 DFRRARSTRTISKRNXXXXXXXXXXXXXXXSGFLTLLLD---SQPHHRP-----TLQPSL 594
           +FRR R+TR ISKRN                     LL    S P   P     T     
Sbjct: 111 EFRRNRTTRVISKRNLSSPRPSQSSARAASPAAARCLLQILRSGPDDHPLGDIVTSFRLD 170

Query: 593 LSVPDDHCFILHSLAELNRPGXXXXXXXXXXXXXXXSLPSMRNFKEKGKLLTAAISCLGK 414
           L+VP+D+C+ILH L      G               ++P M++  E+GKLLTAAI  LG+
Sbjct: 171 LAVPEDYCYILHEL------GNRQKCPLKALKFFNSAMPLMKSLTEQGKLLTAAIGGLGR 224

Query: 413 LGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNVIS 234
           +G PD+AR++FD  L+ G+ +T+YAHSAL+SAYAR+G   +A+ V E M+A GLKP  IS
Sbjct: 225 MGCPDLARKVFDVGLSSGYANTIYAHSALISAYARSGLAMKAMDVLEMMKAAGLKPTTIS 284

Query: 233 YNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFEEM 54
           YNAVIDAC KG  D++  +GFFREM+   + PD KTFNSLLA CSRAG L+ AR++F+EM
Sbjct: 285 YNAVIDACGKGGVDLQLTLGFFREMLHNGLFPDRKTFNSLLAACSRAGHLEDARMVFDEM 344

Query: 53  TRLGIGRDIYTYNTVID 3
             LGIG+DIYTYNT ID
Sbjct: 345 IHLGIGQDIYTYNTFID 361



 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
 Frame = -1

Query: 431 ISCLGKLGR-PDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARG 255
           +S   K GR  D+ R   +  +T    DTV  ++ L++ + + GR      + + MR RG
Sbjct: 430 LSIYVKTGRYEDIVRVCNEMDVTGVDKDTV-TYNCLINGHGKQGRFDIVGYLIQEMRDRG 488

Query: 254 LKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYA 75
           + P+V++Y+ +ID   K +G    A   F E     ++ D   ++S +   ++ G +D A
Sbjct: 489 VSPSVLTYSTLIDIYSK-AGMYGDAANVFLEFKESGLKADVVLYSSFIDTLAKNGLVDCA 547

Query: 74  RVLFEEMTRLGIGRDIYTYNTVID 3
             L +EMTR+GI  ++ TYNT+ID
Sbjct: 548 VWLLDEMTRMGIEPNVVTYNTIID 571



 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
 Frame = -1

Query: 437 AAISCLGKLGRPDVARQL--FDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMR 264
           A I   GK G  D+   L  F   L +G        ++L++A +R G   +A  VF+ M 
Sbjct: 287 AVIDACGK-GGVDLQLTLGFFREMLHNGLFPDRKTFNSLLAACSRAGHLEDARMVFDEMI 345

Query: 263 ARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQL 84
             G+  ++ +YN  IDA  K  G++E A+    +M +  V+P+  T+++L+ G S+  Q 
Sbjct: 346 HLGIGQDIYTYNTFIDAICK-CGNMELALQVTLDMPMNSVQPNVVTYSTLMDGYSKLEQF 404

Query: 83  DYARVLFEEMTRLGIGRDIYTYNTVI 6
           D A  L+E+M  L IG D   YNT++
Sbjct: 405 DEALNLYEKMKALKIGLDRVCYNTLL 430



 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 41/143 (28%), Positives = 70/143 (48%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I  + K G  ++A Q+      +     V  +S L+  Y++  +  EA+ ++E M+A  +
Sbjct: 360 IDAICKCGNMELALQVTLDMPMNSVQPNVVTYSTLMDGYSKLEQFDEALNLYEKMKALKI 419

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYAR 72
             + + YN ++   VK +G  E  V    EM V  V  D  T+N L+ G  + G+ D   
Sbjct: 420 GLDRVCYNTLLSIYVK-TGRYEDIVRVCNEMDVTGVDKDTVTYNCLINGHGKQGRFDIVG 478

Query: 71  VLFEEMTRLGIGRDIYTYNTVID 3
            L +EM   G+   + TY+T+ID
Sbjct: 479 YLIQEMRDRGVSPSVLTYSTLID 501



 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
 Frame = -1

Query: 440 TAAISCL----GKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFE 273
           T   +CL    GK GR D+   L       G   +V  +S L+  Y++ G  G+A  VF 
Sbjct: 458 TVTYNCLINGHGKQGRFDIVGYLIQEMRDRGVSPSVLTYSTLIDIYSKAGMYGDAANVFL 517

Query: 272 SMRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLL 111
             +  GLK +V+ Y++ ID   K +G V+ AV    EM    + P+  T+N+++
Sbjct: 518 EFKESGLKADVVLYSSFIDTLAK-NGLVDCAVWLLDEMTRMGIEPNVVTYNTII 570


>ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Brachypodium distachyon]
 gb|KQJ86279.1| hypothetical protein BRADI_4g04460v3 [Brachypodium distachyon]
          Length = 858

 Score =  213 bits (543), Expect = 9e-60
 Identities = 123/259 (47%), Positives = 157/259 (60%), Gaps = 10/259 (3%)
 Frame = -1

Query: 749 DFRRARSTRTISKRNXXXXXXXXXXXXXXXSGF---LTLLLDSQPHHRPTLQPSLLS--- 588
           +FRRARST+ ISKRN                     +  LL   P  R  L  SL S   
Sbjct: 95  EFRRARSTKNISKRNNRGVGSQDRGGRTFSVAAGRCVDKLLRVAPEDRRALGASLSSFRG 154

Query: 587 ---VPDDHCFILHSLAELNRPGXXXXXXXXXXXXXXXSLPSMRNFK-EKGKLLTAAISCL 420
               PDD+C IL  L + ++                  LP + N   +KGKLLTAAI  L
Sbjct: 155 ELVAPDDYCHILRELGDRDKSAIRALEVFHAA------LPLVGNGSVDKGKLLTAAIGAL 208

Query: 419 GKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNV 240
           GK+ RPD+AR+ FDA +  G+G+TV+A+SAL+SAYAR+G   EA+ V ESM+  GL+P  
Sbjct: 209 GKMSRPDLARRAFDAGIAGGYGNTVFANSALISAYARSGLVNEAMGVLESMKGAGLRPTT 268

Query: 239 ISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFE 60
           ++YNAVIDAC KG  D+   +G+FR+M+  ++ PD KTFNSLL+ CSRAG L+ AR LF+
Sbjct: 269 VTYNAVIDACGKGGVDLRFTLGYFRQMLRDRLCPDRKTFNSLLSACSRAGHLEDARALFD 328

Query: 59  EMTRLGIGRDIYTYNTVID 3
           EM  LGIGRDIYTYNT ID
Sbjct: 329 EMIHLGIGRDIYTYNTFID 347



 Score = 70.5 bits (171), Expect = 8e-10
 Identities = 42/149 (28%), Positives = 77/149 (51%)
 Frame = -1

Query: 449 KLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFES 270
           K   + +S   + G  + AR LFD  +  G G  +Y ++  + A  + G    A+ V   
Sbjct: 305 KTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVLLD 364

Query: 269 MRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAG 90
           M A+ +KPNV++Y+ +ID   K     + A+  + +M    ++ D   +N++LA   +AG
Sbjct: 365 MEAKNVKPNVVTYSTLIDGYSK-LEKYDEALKLYEKMKSLGIQLDRVCYNTVLAIYVKAG 423

Query: 89  QLDYARVLFEEMTRLGIGRDIYTYNTVID 3
           +     ++ +EM   GI +D  TYN++I+
Sbjct: 424 KYGEIAIVCDEMEDSGIEKDTVTYNSLIN 452



 Score = 65.1 bits (157), Expect = 5e-08
 Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
 Frame = -1

Query: 353 DTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNVISYNAVIDACVKGS--GDVEAA 180
           DTV  +++L++ Y + GR      + + MR RG+ P+V++Y+ +ID   K    GD    
Sbjct: 443 DTV-TYNSLINGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNV 501

Query: 179 VGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFEEMTRLGIGRDIYTYNTVID 3
              F+E     ++PD   F+S +   ++ G +++A  L  +MT +GI  ++ TYNT+ID
Sbjct: 502 YLDFKE---SGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIID 557



 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 39/139 (28%), Positives = 68/139 (48%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I+  GK GR D+   L       G   +V  +S L+  Y++ G  G+A  V+   +  GL
Sbjct: 451 INGYGKQGRLDIVSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGL 510

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYAR 72
           KP+V+ +++ ID   K +G VE A+    +M    ++P+  T+N+++    +      ++
Sbjct: 511 KPDVVLFSSFIDTLAK-NGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAFGK------SK 563

Query: 71  VLFEEMTRLGIGRDIYTYN 15
           VL EE    G    +  YN
Sbjct: 564 VLSEEDPEAGEMGIVGVYN 582


>ref|XP_015620361.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Oryza sativa Japonica Group]
          Length = 869

 Score =  211 bits (538), Expect = 5e-59
 Identities = 122/264 (46%), Positives = 156/264 (59%), Gaps = 15/264 (5%)
 Frame = -1

Query: 749 DFRRARSTRTISKRNXXXXXXXXXXXXXXXSGFLTL--------LLDSQPHHRPTLQPSL 594
           +FRRARSTR ISKR+                G  +         LL   P  R  L  +L
Sbjct: 100 EFRRARSTRNISKRSRGGAWGAQDRGGGARGGPFSAAAGRCVEKLLRVAPDDRRALGAAL 159

Query: 593 LS------VPDDHCFILHSLAELNRPGXXXXXXXXXXXXXXXSLPSMRNFK-EKGKLLTA 435
            S       PDD+C +L  L + ++                  LP + N   +KGKLLTA
Sbjct: 160 ASSRGELVAPDDYCHVLRELGDRDKSALRAFEVFHAA------LPHVGNGAVDKGKLLTA 213

Query: 434 AISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARG 255
           +I  LGK+GRPD+AR+ FD  +  G+G+TV+AHSAL+SAYAR+G   EA+ V ESM+  G
Sbjct: 214 SIGALGKMGRPDLARRAFDDGVAGGYGNTVFAHSALISAYARSGLANEAMGVLESMKGAG 273

Query: 254 LKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYA 75
           L+P  +SYNAVIDAC KG  D+   +G+FR+M+   + PD KTFNSLLA CSR G L+ A
Sbjct: 274 LRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAACSRVGHLEDA 333

Query: 74  RVLFEEMTRLGIGRDIYTYNTVID 3
           R +F+EM  LGIGRDIYTYNT ID
Sbjct: 334 RAVFDEMIHLGIGRDIYTYNTFID 357



 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 44/149 (29%), Positives = 79/149 (53%)
 Frame = -1

Query: 449 KLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFES 270
           K   + ++   ++G  + AR +FD  +  G G  +Y ++  + A  + G    A+ V   
Sbjct: 315 KTFNSLLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLD 374

Query: 269 MRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAG 90
           M A+G+KPNV++Y+ +ID   K     E A+    +M   +++ D   +N+LLA   +AG
Sbjct: 375 MEAKGVKPNVVTYSTLIDGYSK-LEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAG 433

Query: 89  QLDYARVLFEEMTRLGIGRDIYTYNTVID 3
           +      + +EM  LGI +D  TYN++I+
Sbjct: 434 KYAEIANVCDEMEELGIEKDTVTYNSLIN 462



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
 Frame = -1

Query: 353 DTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNVISYNAVIDACVKGS--GDVEAA 180
           DTV  +++L++ Y + GR      + + MR RG+ P+V++Y+ +ID   K    GD    
Sbjct: 453 DTV-TYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNV 511

Query: 179 VGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFEEMTRLGIGRDIYTYNTVID 3
              F+E     ++PD   F+S +   ++ G +++A  L  +MT +GI  ++ TYN +ID
Sbjct: 512 YLDFKE---SGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIID 567



 Score = 58.5 bits (140), Expect = 7e-06
 Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
 Frame = -1

Query: 437 AAISCLGKLGRPDVARQL--FDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMR 264
           A I   GK G  D+   L  F   L DG        ++L++A +R G   +A AVF+ M 
Sbjct: 283 AVIDACGK-GGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAACSRVGHLEDARAVFDEMI 341

Query: 263 ARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQL 84
             G+  ++ +YN  IDA  K  G++E A+    +M    V+P+  T+++L+ G S+  + 
Sbjct: 342 HLGIGRDIYTYNTFIDAICK-CGNMELAMQVLLDMEAKGVKPNVVTYSTLIDGYSKLEKY 400

Query: 83  DYARVLFEEMTRLGIGRDIYTYNTVI 6
           + A  L E+M  + I  D   YNT++
Sbjct: 401 EEALKLCEKMKSMRIQLDRVCYNTLL 426



 Score = 58.5 bits (140), Expect = 7e-06
 Identities = 34/130 (26%), Positives = 67/130 (51%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I+  GK GR D+   L       G   +V  +S L+  Y++ G  G+A  V+   +  GL
Sbjct: 461 INGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGL 520

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYAR 72
           KP+V+ +++ ID   K +G +E A+    +M    ++P+  T+N+++    +      ++
Sbjct: 521 KPDVVLFSSFIDTLAK-NGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFGK------SK 573

Query: 71  VLFEEMTRLG 42
           V+ E+ + +G
Sbjct: 574 VMMEDDSEVG 583


>ref|XP_020164531.1| pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Aegilops tauschii subsp. tauschii]
 ref|XP_020164532.1| pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Aegilops tauschii subsp. tauschii]
          Length = 856

 Score =  209 bits (532), Expect = 3e-58
 Identities = 121/259 (46%), Positives = 157/259 (60%), Gaps = 10/259 (3%)
 Frame = -1

Query: 749 DFRRARSTRTISKRNXXXXXXXXXXXXXXXSGF---LTLLLDSQPHHRPTLQPSLLSV-- 585
           +FRRARST+ ISKRN               +     +  LL   P  R  L  SL S   
Sbjct: 93  EFRRARSTKNISKRNNRGAGGQERGARASSAAAGRCVDKLLRVAPEDRRALGASLSSFRG 152

Query: 584 ----PDDHCFILHSLAELNRPGXXXXXXXXXXXXXXXSLPSMRNFK-EKGKLLTAAISCL 420
               PDD+C +L  L + ++                  LP + N   +KGKLLTAAI  L
Sbjct: 153 ELVGPDDYCHVLRELGDRDKSALRALEVFHAA------LPLVGNGSVDKGKLLTAAIGAL 206

Query: 419 GKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNV 240
           GK+GRPD+AR+ FD+ +  G+G TV+A+SAL+SAYAR+G   EA+ V ESM+  GL+P  
Sbjct: 207 GKMGRPDLARRGFDSGIAGGYGKTVFAYSALISAYARSGLATEAMGVLESMKGAGLRPTT 266

Query: 239 ISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFE 60
           ++YNAVIDAC KG  D+   +G+FR+M+   + PD KTFNSLL+ CSRAG L+ AR +F+
Sbjct: 267 VTYNAVIDACGKGGVDLRFTLGYFRQMLRDGLCPDRKTFNSLLSACSRAGHLEDARAVFD 326

Query: 59  EMTRLGIGRDIYTYNTVID 3
           EM  LGIGRDIYTYNT ID
Sbjct: 327 EMIHLGIGRDIYTYNTFID 345



 Score = 70.5 bits (171), Expect = 8e-10
 Identities = 43/149 (28%), Positives = 76/149 (51%)
 Frame = -1

Query: 449 KLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFES 270
           K   + +S   + G  + AR +FD  +  G G  +Y ++  + A  + G    A+ V   
Sbjct: 303 KTFNSLLSACSRAGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNIELAMQVLLD 362

Query: 269 MRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAG 90
           M A+ LKPNV++Y+ +ID   K     E A+  + +M    +R D   +N++LA   + G
Sbjct: 363 MEAKKLKPNVVTYSTLIDGYSK-LEKYEEALKLYEKMKSLGIRLDRVCYNTVLAIYVKTG 421

Query: 89  QLDYARVLFEEMTRLGIGRDIYTYNTVID 3
           +     ++ +EM   GI +D  TYN++I+
Sbjct: 422 KYAEIAIVCDEMEDSGIEKDTVTYNSLIN 450



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 2/146 (1%)
 Frame = -1

Query: 437 AAISCLGKLGRPDVARQL--FDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMR 264
           A I   GK G  D+   L  F   L DG        ++L+SA +R G   +A AVF+ M 
Sbjct: 271 AVIDACGK-GGVDLRFTLGYFRQMLRDGLCPDRKTFNSLLSACSRAGHLEDARAVFDEMI 329

Query: 263 ARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQL 84
             G+  ++ +YN  IDA  K  G++E A+    +M   K++P+  T+++L+ G S+  + 
Sbjct: 330 HLGIGRDIYTYNTFIDAICK-CGNIELAMQVLLDMEAKKLKPNVVTYSTLIDGYSKLEKY 388

Query: 83  DYARVLFEEMTRLGIGRDIYTYNTVI 6
           + A  L+E+M  LGI  D   YNTV+
Sbjct: 389 EEALKLYEKMKSLGIRLDRVCYNTVL 414


>ref|XP_020254341.1| pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Asparagus officinalis]
          Length = 772

 Score =  207 bits (528), Expect = 5e-58
 Identities = 99/129 (76%), Positives = 114/129 (88%)
 Frame = -1

Query: 389 QLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNVISYNAVIDAC 210
           Q+F  A+    GDTV+AH+A++SA+ARNGR  +AV+VFE MR +GLKPNV+SYNAVIDAC
Sbjct: 147 QIFRGAVRTAVGDTVFAHTAIISAFARNGRSADAVSVFELMRRKGLKPNVVSYNAVIDAC 206

Query: 209 VKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFEEMTRLGIGRD 30
           VKGSGDV  AVGFFREM+ GKVRPD+KTFNSLLAGCSRAG++DYARVLFEEM RLGIGRD
Sbjct: 207 VKGSGDVRGAVGFFREMVEGKVRPDSKTFNSLLAGCSRAGEVDYARVLFEEMMRLGIGRD 266

Query: 29  IYTYNTVID 3
           IYTYNT ID
Sbjct: 267 IYTYNTFID 275



 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 42/148 (28%), Positives = 78/148 (52%)
 Frame = -1

Query: 449 KLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFES 270
           K   + ++   + G  D AR LF+  +  G G  +Y ++  + A ++ G    AV +   
Sbjct: 233 KTFNSLLAGCSRAGEVDYARVLFEEMMRLGIGRDIYTYNTFIDAVSKCGNMELAVKIMTE 292

Query: 269 MRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAG 90
           M A  L+PNV++++ +ID   K     + A+  +REM V  ++ D   +N+LL+   + G
Sbjct: 293 MPANDLRPNVVTFSTLIDGYSK-LERFDEALDLYREMRVLGIKLDRVCYNTLLSIYVKIG 351

Query: 89  QLDYARVLFEEMTRLGIGRDIYTYNTVI 6
           + +    + EEM  +G+ +D  TYN++I
Sbjct: 352 KFEETARVCEEMEAMGVDKDTVTYNSLI 379



 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 41/143 (28%), Positives = 67/143 (46%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I  + K G  ++A ++      +     V   S L+  Y++  R  EA+ ++  MR  G+
Sbjct: 274 IDAVSKCGNMELAVKIMTEMPANDLRPNVVTFSTLIDGYSKLERFDEALDLYREMRVLGI 333

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYAR 72
           K + + YN ++   VK  G  E       EM    V  D  T+NSL+ G  + G+LD   
Sbjct: 334 KLDRVCYNTLLSIYVK-IGKFEETARVCEEMEAMGVDKDTVTYNSLIKGYGKQGRLDIVS 392

Query: 71  VLFEEMTRLGIGRDIYTYNTVID 3
            L  +M   G+   + TY+T+ID
Sbjct: 393 FLVRDMREKGVSLSVLTYSTLID 415



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 30/169 (17%)
 Frame = -1

Query: 419 GKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNV 240
           GK GR D+   L       G   +V  +S L+  Y++ G  G+A  VF   +  GLK +V
Sbjct: 383 GKQGRLDIVSFLVRDMREKGVSLSVLTYSTLIDIYSKAGLYGDAANVFLDFKESGLKADV 442

Query: 239 ISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAG--------------- 105
           + Y++ ID   K +G VE AV    EM+   + P+  T+N+++ G               
Sbjct: 443 VLYSSFIDTLAK-NGLVECAVWLLDEMVRVGIEPNVVTYNTVIDGFGKSRDFMDEDGAAV 501

Query: 104 ---------------CSRAGQLDYARVLFEEMTRLGIGRDIYTYNTVID 3
                            R+ +L Y   LF+ M + G+  ++ T++ +++
Sbjct: 502 FGPIVKGIGQPKVEEARRSEELFYILGLFQRMVQRGVKPNVVTFSAILN 550


>ref|XP_022680713.1| pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Setaria italica]
 gb|KQL16599.1| hypothetical protein SETIT_021190mg [Setaria italica]
          Length = 867

 Score =  207 bits (527), Expect = 2e-57
 Identities = 120/261 (45%), Positives = 156/261 (59%), Gaps = 12/261 (4%)
 Frame = -1

Query: 749 DFRRARSTRTISKRNXXXXXXXXXXXXXXXSGF-----LTLLLDSQPHHRPTLQPSLLS- 588
           +FRRAR+TRTISKR                S       +  LL   P  +  L  +L S 
Sbjct: 101 EFRRARTTRTISKRTRGGGGGAGAQDRWRASSAAAGRCVDKLLRLAPEDQRALSAALSSF 160

Query: 587 -----VPDDHCFILHSLAELNRPGXXXXXXXXXXXXXXXSLPSMRNFK-EKGKLLTAAIS 426
                 P+D+C +L  L + ++                  LP +     EKGKLLTAAI 
Sbjct: 161 RGELVAPEDYCQVLRELGDRDKSAYRAYEVFYAA------LPLVGGGAVEKGKLLTAAIG 214

Query: 425 CLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKP 246
            LGK+GRPD+AR+ FD+ +  G+G+TV+AHSAL+SAYAR+G   EA+ V ESM+  GL+P
Sbjct: 215 ALGKIGRPDLARRAFDSGIAGGYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRP 274

Query: 245 NVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVL 66
             +SYNAVIDAC KG  D+   +G+FR+M+   + PD KTFNSLLA CSRAG L+ AR +
Sbjct: 275 TTVSYNAVIDACGKGGVDLRLTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARAV 334

Query: 65  FEEMTRLGIGRDIYTYNTVID 3
           F+EM  LG GRDIYTYNT +D
Sbjct: 335 FDEMIHLGSGRDIYTYNTFVD 355



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 43/149 (28%), Positives = 76/149 (51%)
 Frame = -1

Query: 449 KLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFES 270
           K   + ++   + G  + AR +FD  +  G G  +Y ++  V A  + G    A+ V   
Sbjct: 313 KTFNSLLAACSRAGHLEDARAVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELAMQVVLD 372

Query: 269 MRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAG 90
           M A+ +KPNV++Y+ ++D   K     + A+    +M    ++ D   +N+LLA   + G
Sbjct: 373 MEAKNVKPNVVTYSTLMDGFSK-LEKYDEALKLRGKMKSLGIQLDRVCYNTLLAIYVKTG 431

Query: 89  QLDYARVLFEEMTRLGIGRDIYTYNTVID 3
           + D    + EEM  LGI +D  TYN++I+
Sbjct: 432 KYDEIATVCEEMESLGIEKDTVTYNSLIN 460



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
 Frame = -1

Query: 416 KLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNVI 237
           K G+ D    + +   + G       +++L++ Y + GR      + + MRA+G+ P+V+
Sbjct: 429 KTGKYDEIATVCEEMESLGIEKDTVTYNSLINGYGKQGRLDMVALLVQDMRAQGVAPSVL 488

Query: 236 SYNAVIDACVKGS--GDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLF 63
           +Y+ +ID   K    GD       F+E     ++ D   F+S +   ++ G ++ A  L 
Sbjct: 489 TYSTLIDIYSKAGMHGDAFNVYLDFKE---SGLKADVVLFSSFIDTLAKNGLVECALSLL 545

Query: 62  EEMTRLGIGRDIYTYNTVID 3
           +EM ++GI  ++ TYNT+ID
Sbjct: 546 DEMMKMGIKPNVVTYNTIID 565



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
 Frame = -1

Query: 437 AAISCLGKLGRPDVARQL--FDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMR 264
           A I   GK G  D+   L  F   L DG        ++L++A +R G   +A AVF+ M 
Sbjct: 281 AVIDACGK-GGVDLRLTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARAVFDEMI 339

Query: 263 ARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQL 84
             G   ++ +YN  +DA  K  G++E A+    +M    V+P+  T+++L+ G S+  + 
Sbjct: 340 HLGSGRDIYTYNTFVDAICK-CGNMELAMQVVLDMEAKNVKPNVVTYSTLMDGFSKLEKY 398

Query: 83  DYARVLFEEMTRLGIGRDIYTYNTVI 6
           D A  L  +M  LGI  D   YNT++
Sbjct: 399 DEALKLRGKMKSLGIQLDRVCYNTLL 424



 Score = 58.2 bits (139), Expect = 9e-06
 Identities = 32/107 (29%), Positives = 57/107 (53%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I+  GK GR D+   L       G   +V  +S L+  Y++ G  G+A  V+   +  GL
Sbjct: 459 INGYGKQGRLDMVALLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGL 518

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLL 111
           K +V+ +++ ID   K +G VE A+    EM+   ++P+  T+N+++
Sbjct: 519 KADVVLFSSFIDTLAK-NGLVECALSLLDEMMKMGIKPNVVTYNTII 564


>gb|OEL23565.1| Pentatricopeptide repeat-containing protein, partial [Dichanthelium
           oligosanthes]
          Length = 654

 Score =  204 bits (518), Expect = 3e-57
 Identities = 120/261 (45%), Positives = 153/261 (58%), Gaps = 12/261 (4%)
 Frame = -1

Query: 749 DFRRARSTRTISKRNXXXXXXXXXXXXXXXSGF-----LTLLLDSQPHHRPTLQPSLLS- 588
           +FRRAR+TRTISKR                S       +  LL   P     L  +L S 
Sbjct: 107 EFRRARTTRTISKRTRGSGGGAGAQDRGRVSSAAAGRCVDKLLRVAPEDGRALGGALSSF 166

Query: 587 -----VPDDHCFILHSLAELNRPGXXXXXXXXXXXXXXXSLPSMRNFK-EKGKLLTAAIS 426
                 P+D+C +L  L + ++                  LP +     EKGKLLTAAI 
Sbjct: 167 RGELVAPEDYCQVLRELGDRDKSAYRAYEVFYAA------LPLVGGGAVEKGKLLTAAIG 220

Query: 425 CLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKP 246
            LGK+GRPD+AR+ FD  +  G+G+TV+AHSAL+SAYAR+G   EA  V ESM+  GL+P
Sbjct: 221 ALGKMGRPDLARRAFDTGIAGGYGNTVFAHSALISAYARSGLATEATGVLESMKGAGLRP 280

Query: 245 NVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVL 66
             +SYNAVIDAC KG  D+   +G+FR+M+   + PD KTFNSLLA CSRAG L+ AR +
Sbjct: 281 TTVSYNAVIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARAV 340

Query: 65  FEEMTRLGIGRDIYTYNTVID 3
           F+EM  LG GRDIYTYNT +D
Sbjct: 341 FDEMIHLGSGRDIYTYNTFVD 361



 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 43/149 (28%), Positives = 75/149 (50%)
 Frame = -1

Query: 449 KLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFES 270
           K   + ++   + G  + AR +FD  +  G G  +Y ++  V A  + G    A+ V   
Sbjct: 319 KTFNSLLAACSRAGHLEDARAVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELAMQVVLD 378

Query: 269 MRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAG 90
           M A  +KPNV++Y+ ++D   K     + A+    +M    ++ D   +N+LLA   + G
Sbjct: 379 MEANNIKPNVVTYSTLMDGFSK-LEKYDEALKLRGKMKSLGIQLDRVCYNTLLAIYVKTG 437

Query: 89  QLDYARVLFEEMTRLGIGRDIYTYNTVID 3
           + D    + EEM  LGI +D  TYN++I+
Sbjct: 438 KYDEIATVCEEMESLGIEKDTVTYNSLIN 466



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
 Frame = -1

Query: 437 AAISCLGKLGRPDVARQL--FDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMR 264
           A I   GK G  D+   L  F   L DG        ++L++A +R G   +A AVF+ M 
Sbjct: 287 AVIDACGK-GGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARAVFDEMI 345

Query: 263 ARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQL 84
             G   ++ +YN  +DA  K  G++E A+    +M    ++P+  T+++L+ G S+  + 
Sbjct: 346 HLGSGRDIYTYNTFVDAICK-CGNMELAMQVVLDMEANNIKPNVVTYSTLMDGFSKLEKY 404

Query: 83  DYARVLFEEMTRLGIGRDIYTYNTVI 6
           D A  L  +M  LGI  D   YNT++
Sbjct: 405 DEALKLRGKMKSLGIQLDRVCYNTLL 430



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 37/140 (26%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
 Frame = -1

Query: 416 KLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNVI 237
           K G+ D    + +   + G       +++L++ Y + G       + + MRA+G+ P+V+
Sbjct: 435 KTGKYDEIATVCEEMESLGIEKDTVTYNSLINGYGKQGCLDMVAFLVQDMRAQGVAPSVL 494

Query: 236 SYNAVIDACVKGS--GDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLF 63
           +Y+ +ID   K    GD       F+E     ++ D   F+S +   ++ G ++ A  L 
Sbjct: 495 TYSTLIDIYSKAGMHGDAFNVYLDFKE---SGLKADVVLFSSFIDTLAKNGLVECALSLL 551

Query: 62  EEMTRLGIGRDIYTYNTVID 3
           +EM ++GI  ++ TYNT+ID
Sbjct: 552 DEMMKMGIKPNVVTYNTIID 571


>gb|OEL23564.1| Pentatricopeptide repeat-containing protein [Dichanthelium
           oligosanthes]
          Length = 666

 Score =  204 bits (518), Expect = 3e-57
 Identities = 120/261 (45%), Positives = 153/261 (58%), Gaps = 12/261 (4%)
 Frame = -1

Query: 749 DFRRARSTRTISKRNXXXXXXXXXXXXXXXSGF-----LTLLLDSQPHHRPTLQPSLLS- 588
           +FRRAR+TRTISKR                S       +  LL   P     L  +L S 
Sbjct: 110 EFRRARTTRTISKRTRGSGGGAGAQDRGRVSSAAAGRCVDKLLRVAPEDGRALGGALSSF 169

Query: 587 -----VPDDHCFILHSLAELNRPGXXXXXXXXXXXXXXXSLPSMRNFK-EKGKLLTAAIS 426
                 P+D+C +L  L + ++                  LP +     EKGKLLTAAI 
Sbjct: 170 RGELVAPEDYCQVLRELGDRDKSAYRAYEVFYAA------LPLVGGGAVEKGKLLTAAIG 223

Query: 425 CLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKP 246
            LGK+GRPD+AR+ FD  +  G+G+TV+AHSAL+SAYAR+G   EA  V ESM+  GL+P
Sbjct: 224 ALGKMGRPDLARRAFDTGIAGGYGNTVFAHSALISAYARSGLATEATGVLESMKGAGLRP 283

Query: 245 NVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVL 66
             +SYNAVIDAC KG  D+   +G+FR+M+   + PD KTFNSLLA CSRAG L+ AR +
Sbjct: 284 TTVSYNAVIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARAV 343

Query: 65  FEEMTRLGIGRDIYTYNTVID 3
           F+EM  LG GRDIYTYNT +D
Sbjct: 344 FDEMIHLGSGRDIYTYNTFVD 364



 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 43/149 (28%), Positives = 75/149 (50%)
 Frame = -1

Query: 449 KLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFES 270
           K   + ++   + G  + AR +FD  +  G G  +Y ++  V A  + G    A+ V   
Sbjct: 322 KTFNSLLAACSRAGHLEDARAVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELAMQVVLD 381

Query: 269 MRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAG 90
           M A  +KPNV++Y+ ++D   K     + A+    +M    ++ D   +N+LLA   + G
Sbjct: 382 MEANNIKPNVVTYSTLMDGFSK-LEKYDEALKLRGKMKSLGIQLDRVCYNTLLAIYVKTG 440

Query: 89  QLDYARVLFEEMTRLGIGRDIYTYNTVID 3
           + D    + EEM  LGI +D  TYN++I+
Sbjct: 441 KYDEIATVCEEMESLGIEKDTVTYNSLIN 469



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
 Frame = -1

Query: 437 AAISCLGKLGRPDVARQL--FDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMR 264
           A I   GK G  D+   L  F   L DG        ++L++A +R G   +A AVF+ M 
Sbjct: 290 AVIDACGK-GGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARAVFDEMI 348

Query: 263 ARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQL 84
             G   ++ +YN  +DA  K  G++E A+    +M    ++P+  T+++L+ G S+  + 
Sbjct: 349 HLGSGRDIYTYNTFVDAICK-CGNMELAMQVVLDMEANNIKPNVVTYSTLMDGFSKLEKY 407

Query: 83  DYARVLFEEMTRLGIGRDIYTYNTVI 6
           D A  L  +M  LGI  D   YNT++
Sbjct: 408 DEALKLRGKMKSLGIQLDRVCYNTLL 433



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 37/140 (26%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
 Frame = -1

Query: 416 KLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNVI 237
           K G+ D    + +   + G       +++L++ Y + G       + + MRA+G+ P+V+
Sbjct: 438 KTGKYDEIATVCEEMESLGIEKDTVTYNSLINGYGKQGCLDMVAFLVQDMRAQGVAPSVL 497

Query: 236 SYNAVIDACVKGS--GDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLF 63
           +Y+ +ID   K    GD       F+E     ++ D   F+S +   ++ G ++ A  L 
Sbjct: 498 TYSTLIDIYSKAGMHGDAFNVYLDFKE---SGLKADVVLFSSFIDTLAKNGLVECALSLL 554

Query: 62  EEMTRLGIGRDIYTYNTVID 3
           +EM ++GI  ++ TYNT+ID
Sbjct: 555 DEMMKMGIKPNVVTYNTIID 574


>ref|XP_002442324.2| pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Sorghum bicolor]
 gb|EES16159.2| hypothetical protein SORBI_3008G130000 [Sorghum bicolor]
          Length = 872

 Score =  204 bits (520), Expect = 2e-56
 Identities = 118/259 (45%), Positives = 156/259 (60%), Gaps = 10/259 (3%)
 Frame = -1

Query: 749 DFRRARSTRTISKRNXXXXXXXXXXXXXXXSGF---LTLLLDSQPHHRPTLQPSLLSV-- 585
           +FRRAR+T+TISKR                +     +  LL   P  R  L  +L S   
Sbjct: 110 EFRRARTTKTISKRTRGGGGGAQDRGRVASAAAGRCVEKLLRVAPEDRRGLGSALSSFRG 169

Query: 584 ----PDDHCFILHSLAELNRPGXXXXXXXXXXXXXXXSLPSMRNFK-EKGKLLTAAISCL 420
               P+D+C +L  L + ++                  LP +     +KGKLLTAAI  L
Sbjct: 170 DLLGPEDYCQVLRELGDRDKSALRAFEVFYAA------LPLVGGGAVDKGKLLTAAIGAL 223

Query: 419 GKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNV 240
           GK+GRPD+AR+ FD+ + D +G+TV+AHSAL+SAYAR+G   EA+ V ESM+  GL+P  
Sbjct: 224 GKMGRPDLARRAFDSGIADRYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPTT 283

Query: 239 ISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFE 60
           +SYNAVIDAC KG  D+   +G+FR+M+   + PD KTFNSLLA CSRAG L+ AR +F+
Sbjct: 284 VSYNAVIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFD 343

Query: 59  EMTRLGIGRDIYTYNTVID 3
           EM  LG GRDIYTYNT +D
Sbjct: 344 EMIHLGSGRDIYTYNTFVD 362



 Score = 67.8 bits (164), Expect = 6e-09
 Identities = 42/149 (28%), Positives = 74/149 (49%)
 Frame = -1

Query: 449 KLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFES 270
           K   + ++   + G  + AR +FD  +  G G  +Y ++  V A  + G    A  V   
Sbjct: 320 KTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELATQVVLD 379

Query: 269 MRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAG 90
           M A  +KPNV++Y+ ++D   K     + A+    +M    ++ D   +N+LLA   + G
Sbjct: 380 MEANNIKPNVVTYSTLMDGFSK-LEKYDEALKLREKMKSLGIQLDRVCYNTLLAIYVKTG 438

Query: 89  QLDYARVLFEEMTRLGIGRDIYTYNTVID 3
           + D    + E+M  LGI +D  TYN++I+
Sbjct: 439 KYDEIATVCEDMENLGIEKDTVTYNSLIN 467



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
 Frame = -1

Query: 437 AAISCLGKLGRPDVARQL--FDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMR 264
           A I   GK G  D+   L  F   L DG        ++L++A +R G   +A  VF+ M 
Sbjct: 288 AVIDACGK-GGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMI 346

Query: 263 ARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQL 84
             G   ++ +YN  +DA  K  G++E A     +M    ++P+  T+++L+ G S+  + 
Sbjct: 347 HLGSGRDIYTYNTFVDAICK-CGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKY 405

Query: 83  DYARVLFEEMTRLGIGRDIYTYNTVI 6
           D A  L E+M  LGI  D   YNT++
Sbjct: 406 DEALKLREKMKSLGIQLDRVCYNTLL 431



 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 33/107 (30%), Positives = 57/107 (53%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I+  GK GR D+   L       G   +V  +S L+  Y++ G  G+A  V+   +  GL
Sbjct: 466 INGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGL 525

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLL 111
           K +V+ +++ ID   K +G VE A+    EMI   ++P+  T+N+++
Sbjct: 526 KADVVLFSSFIDTLAK-NGLVECALSLLDEMIKMGIKPNVVTYNTII 571


>ref|XP_008660445.1| pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Zea mays]
 gb|ONM01205.1| genomes uncoupled1 [Zea mays]
          Length = 870

 Score =  202 bits (513), Expect = 2e-55
 Identities = 119/261 (45%), Positives = 154/261 (59%), Gaps = 12/261 (4%)
 Frame = -1

Query: 749 DFRRARSTRTISKRNXXXXXXXXXXXXXXXSGF-----LTLLLDSQPHHRPTLQPSLLSV 585
           +FRRAR+T+TISKR                S       +  LL   P  R  L  +L S 
Sbjct: 104 EFRRARTTKTISKRTRGGGGGGGAQDRGRVSSAAAGRCVEKLLRVAPEDRRGLGSALSSF 163

Query: 584 ------PDDHCFILHSLAELNRPGXXXXXXXXXXXXXXXSLPSMRNFK-EKGKLLTAAIS 426
                 P+D+C IL  L + ++                  LP +     +KGKLLTAAI 
Sbjct: 164 RGELLGPEDYCQILRGLGDRDKSALRAFEVFYAA------LPLVGGGAVDKGKLLTAAIG 217

Query: 425 CLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKP 246
            LGK+GRPD+AR+ FD  +   +G+TV+AHSAL+SAYAR+G   EA+ V ESM+  GL+P
Sbjct: 218 ALGKMGRPDLARRAFDTGIAGSYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRP 277

Query: 245 NVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVL 66
             +SYNAVIDAC KG  D+   +G+FR+M+   + PD KTFNSLLA CSRAG L+ AR +
Sbjct: 278 TTVSYNAVIDACGKGGVDLRFTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTV 337

Query: 65  FEEMTRLGIGRDIYTYNTVID 3
           F+EM  LG GRDIYTYNT +D
Sbjct: 338 FDEMIHLGSGRDIYTYNTFVD 358


>gb|PAN21386.1| hypothetical protein PAHAL_I04576 [Panicum hallii]
          Length = 869

 Score =  200 bits (509), Expect = 6e-55
 Identities = 119/261 (45%), Positives = 152/261 (58%), Gaps = 12/261 (4%)
 Frame = -1

Query: 749 DFRRARSTRTISKRNXXXXXXXXXXXXXXXSGF-----LTLLLDSQPHHRPTLQPSLLS- 588
           +FRRAR+TRTISKR                S       +  LL   P  R  L  +L S 
Sbjct: 103 EFRRARTTRTISKRTRGGGGSAGAQDRGRVSSAAAGRCVDKLLRVGPEDRRALGAALSSF 162

Query: 587 -----VPDDHCFILHSLAELNRPGXXXXXXXXXXXXXXXSLPSMRNFKE-KGKLLTAAIS 426
                 P+D+C +L  L + ++                  LP +      KGKLLTAAI 
Sbjct: 163 RGELVAPEDYCQVLRELGDRDKSAYRAFEVFYAA------LPLVGGGAVGKGKLLTAAIG 216

Query: 425 CLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKP 246
            LGK+GRPD+AR+ FD  +  G+G+TV+AHSAL+SAYAR+G   EA+ V E M+  GL+P
Sbjct: 217 ALGKMGRPDLARRAFDTGIAGGYGNTVFAHSALISAYARSGLATEAMGVLELMKGAGLRP 276

Query: 245 NVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVL 66
             +SYNAVIDAC KG  D    +G+FR+M+   + PD KTFNSLLA CSRAG L+ AR +
Sbjct: 277 TTVSYNAVIDACGKGGVDFTFTLGYFRQMLHDGLCPDRKTFNSLLAACSRAGHLEDARAV 336

Query: 65  FEEMTRLGIGRDIYTYNTVID 3
           F+EM  LG GRDIYTYNT +D
Sbjct: 337 FDEMIHLGSGRDIYTYNTFVD 357



 Score = 64.7 bits (156), Expect = 6e-08
 Identities = 42/149 (28%), Positives = 74/149 (49%)
 Frame = -1

Query: 449 KLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFES 270
           K   + ++   + G  + AR +FD  +  G G  +Y ++  V A  + G    A+ V   
Sbjct: 315 KTFNSLLAACSRAGHLEDARAVFDEMIHLGSGRDIYTYNTFVDAICKCGNMELAMQVVLD 374

Query: 269 MRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAG 90
           M A  +KPNV++Y+ ++D   K     + A+    +M    ++ D   +N+LLA   + G
Sbjct: 375 MEANNVKPNVVTYSTLMDGFSK-LEKYDEALKLRGKMKSLGIQLDRVCYNTLLAIYVKTG 433

Query: 89  QLDYARVLFEEMTRLGIGRDIYTYNTVID 3
           +      + EEM  LGI +D  TYN++I+
Sbjct: 434 KYGEIASVCEEMESLGIDKDTVTYNSLIN 462



 Score = 62.4 bits (150), Expect = 4e-07
 Identities = 37/119 (31%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
 Frame = -1

Query: 353 DTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNVISYNAVIDACVKGS--GDVEAA 180
           DTV  +++L++ Y + GR      + + MRA+G+ P+V++Y+ +ID   K    GD    
Sbjct: 453 DTV-TYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNV 511

Query: 179 VGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFEEMTRLGIGRDIYTYNTVID 3
              F+E     ++ D   F+S +   ++ G ++ A  L +EM ++GI  ++ TYNT+ID
Sbjct: 512 YLDFKE---SGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIID 567



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 40/126 (31%), Positives = 66/126 (52%)
 Frame = -1

Query: 383 FDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNVISYNAVIDACVK 204
           F   L DG        ++L++A +R G   +A AVF+ M   G   ++ +YN  +DA  K
Sbjct: 302 FRQMLHDGLCPDRKTFNSLLAACSRAGHLEDARAVFDEMIHLGSGRDIYTYNTFVDAICK 361

Query: 203 GSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFEEMTRLGIGRDIY 24
             G++E A+    +M    V+P+  T+++L+ G S+  + D A  L  +M  LGI  D  
Sbjct: 362 -CGNMELAMQVVLDMEANNVKPNVVTYSTLMDGFSKLEKYDEALKLRGKMKSLGIQLDRV 420

Query: 23  TYNTVI 6
            YNT++
Sbjct: 421 CYNTLL 426



 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 36/130 (27%), Positives = 66/130 (50%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I+  GK GR D+   L       G   +V  +S L+  Y++ G  G+A  V+   +  GL
Sbjct: 461 INGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGL 520

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYAR 72
           K +V+ +++ ID   K +G VE A+    EM+   ++P+  T+N+++    +      ++
Sbjct: 521 KADVVLFSSFIDTLAK-NGLVECALSLLDEMMKMGIKPNVVTYNTIIDAFGK------SK 573

Query: 71  VLFEEMTRLG 42
           +L EE   +G
Sbjct: 574 ILTEEDPEIG 583


>ref|XP_006664642.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Oryza brachyantha]
          Length = 744

 Score =  198 bits (504), Expect = 9e-55
 Identities = 110/223 (49%), Positives = 141/223 (63%), Gaps = 7/223 (3%)
 Frame = -1

Query: 650 LTLLLDSQPHHRPTLQPSLLS------VPDDHCFILHSLAELNRPGXXXXXXXXXXXXXX 489
           L  LL   P  R  L  +L S       PDD+C +L  L + ++                
Sbjct: 12  LPRLLRVAPDDRRALGATLASFRGELVAPDDYCQLLRELGDRDKSALRAFEVFHAT---- 67

Query: 488 XSLPSMRNFK-EKGKLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYA 312
             LP + N   +KGKLLTA+I  LGK+GR D+AR+ FDA +  G+G+TV+AHSAL+SAYA
Sbjct: 68  --LPLVGNGAVDKGKLLTASIGALGKMGRSDLARRAFDAGVAGGYGNTVFAHSALISAYA 125

Query: 311 RNGRPGEAVAVFESMRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDA 132
           R+G   EA+ V E M+  GL+P  +SYNAVIDAC KG  D+   +G+FR+M+   + PD 
Sbjct: 126 RSGLANEAMGVLELMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDR 185

Query: 131 KTFNSLLAGCSRAGQLDYARVLFEEMTRLGIGRDIYTYNTVID 3
           KTFNSLLA CSRAG L+ AR +F+EM  LGIGRDIYTYNT ID
Sbjct: 186 KTFNSLLAACSRAGHLEDARAVFDEMIHLGIGRDIYTYNTFID 228



 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 43/149 (28%), Positives = 77/149 (51%)
 Frame = -1

Query: 449 KLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFES 270
           K   + ++   + G  + AR +FD  +  G G  +Y ++  + A  + G    A+ V   
Sbjct: 186 KTFNSLLAACSRAGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLD 245

Query: 269 MRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAG 90
           M A+G+KPNV++Y+ +ID   K     E A+    +M   +++ D   +N+LLA   + G
Sbjct: 246 MEAKGVKPNVVTYSTLIDGYSK-LEKYEEALKLCEKMKSLRIQLDRVCYNTLLAIYVKTG 304

Query: 89  QLDYARVLFEEMTRLGIGRDIYTYNTVID 3
           +      + +EM  LGI +D  TYN++I+
Sbjct: 305 KYTEIANVCDEMEELGIEKDTVTYNSLIN 333



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
 Frame = -1

Query: 437 AAISCLGKLGRPDVARQL--FDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMR 264
           A I   GK G  D+   L  F   L DG        ++L++A +R G   +A AVF+ M 
Sbjct: 154 AVIDACGK-GGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAACSRAGHLEDARAVFDEMI 212

Query: 263 ARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQL 84
             G+  ++ +YN  IDA  K  G++E A+    +M    V+P+  T+++L+ G S+  + 
Sbjct: 213 HLGIGRDIYTYNTFIDAICK-CGNMELAMQVLLDMEAKGVKPNVVTYSTLIDGYSKLEKY 271

Query: 83  DYARVLFEEMTRLGIGRDIYTYNTVI 6
           + A  L E+M  L I  D   YNT++
Sbjct: 272 EEALKLCEKMKSLRIQLDRVCYNTLL 297



 Score = 58.2 bits (139), Expect = 9e-06
 Identities = 31/107 (28%), Positives = 57/107 (53%)
 Frame = -1

Query: 431 ISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGL 252
           I+  GK GR D+   L       G   +V  +S L+  Y++ G  G+A  V+   +  GL
Sbjct: 332 INGYGKQGRLDIVSILVQDMRKRGIAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGL 391

Query: 251 KPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLL 111
           KP+V+ +++ ID   K +G +E A+    +M    ++P+  T+N+++
Sbjct: 392 KPDVVLFSSFIDTLAK-NGLIEWALSLLNDMTEMGIKPNVVTYNAII 437


>gb|KMZ59111.1| putative Pentatricopeptide repeat-containing protein [Zostera
           marina]
          Length = 836

 Score =  189 bits (480), Expect = 5e-51
 Identities = 92/157 (58%), Positives = 118/157 (75%)
 Frame = -1

Query: 473 MRNFKEKGKLLTAAISCLGKLGRPDVARQLFDAALTDGFGDTVYAHSALVSAYARNGRPG 294
           MR+  E+GKLLTA I  LG++GR D+A++ FD  L +G+G TVYA+SAL+SAYAR+G   
Sbjct: 187 MRDPTERGKLLTAVIGSLGRMGRSDLAKEAFDVGLNEGYGKTVYAYSALISAYARSGLST 246

Query: 293 EAVAVFESMRARGLKPNVISYNAVIDACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSL 114
            A+ VFESM+A G+KPN ++YN VIDACVKG  D+      FREM+   VRPD  TFNSL
Sbjct: 247 GALGVFESMKAVGMKPNSVTYNTVIDACVKGGEDLHRTTEVFREMLRNGVRPDRITFNSL 306

Query: 113 LAGCSRAGQLDYARVLFEEMTRLGIGRDIYTYNTVID 3
           LAGCSRA   + AR++++EM  LGIGRD++TYNT ID
Sbjct: 307 LAGCSRARHWENARLMYDEMVHLGIGRDVFTYNTFID 343



 Score = 61.2 bits (147), Expect = 9e-07
 Identities = 38/130 (29%), Positives = 64/130 (49%)
 Frame = -1

Query: 395 ARQLFDAALTDGFGDTVYAHSALVSAYARNGRPGEAVAVFESMRARGLKPNVISYNAVID 216
           AR ++D  +  G G  V+ ++  + A  + G    AV +   M    L PNV++Y+ ++D
Sbjct: 319 ARLMYDEMVHLGIGRDVFTYNTFIDAICKCGNMELAVQIMSEMPVNNLNPNVVTYSTLMD 378

Query: 215 ACVKGSGDVEAAVGFFREMIVGKVRPDAKTFNSLLAGCSRAGQLDYARVLFEEMTRLGIG 36
              K     + A+  + E+    +  D   FN+LL+   +  + +      EEM RLGI 
Sbjct: 379 GYSK-LERYDEALNLYEEVKGLSIPMDRVCFNTLLSIYVKMERYEDVVRTSEEMERLGID 437

Query: 35  RDIYTYNTVI 6
           RD+ TYN +I
Sbjct: 438 RDVVTYNALI 447