BLASTX nr result

ID: Ophiopogon22_contig00008632 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00008632
         (364 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020245336.1| coilin-like [Asparagus officinalis]               129   1e-34
ref|XP_020253855.1| coilin-like [Asparagus officinalis]                99   2e-21
gb|ONK77633.1| uncharacterized protein A4U43_C02F8840 [Asparagus...    69   3e-12

>ref|XP_020245336.1| coilin-like [Asparagus officinalis]
          Length = 271

 Score =  129 bits (325), Expect = 1e-34
 Identities = 64/115 (55%), Positives = 85/115 (73%)
 Frame = +3

Query: 3   DDLCAHNDNAIDTGTVLKSKKKRKHSDGIQGSREKKLKISSKMPNVTGDEEEDTAEANEG 182
           +D CAH +N + TGT  KSKKKRKHSDGIQ  + KKL+ SS+ PN+TG+  ED AEA+E 
Sbjct: 142 EDFCAHTENVVSTGTPPKSKKKRKHSDGIQSPKRKKLRTSSQKPNITGNVVEDAAEADED 201

Query: 183 IHLGNSLESSRERGNSRKRLSKKEKQYTSEGIQNISSYLEDNAEQMTGSDKKERR 347
            HLG SLESS++R +S+KR  KK+K  T+ G  +I+S LED  EQ+T S++K +R
Sbjct: 202 THLGKSLESSKKRCSSKKRSKKKQKPSTANG--SIASQLEDKVEQLTSSNQKRKR 254


>ref|XP_020253855.1| coilin-like [Asparagus officinalis]
          Length = 808

 Score = 98.6 bits (244), Expect = 2e-21
 Identities = 61/126 (48%), Positives = 75/126 (59%), Gaps = 12/126 (9%)
 Frame = +3

Query: 6   DLCAHNDNAIDTGTVLKSKKKRKHSDGIQGSREK------------KLKISSKMPNVTGD 149
           +LC HN+NAI TGT  KSK+K KH DGI+GS                    SK PN  GD
Sbjct: 146 ELCTHNENAIHTGT--KSKRKIKHPDGIEGSNSSLRACILYNMINGNPHFISKEPNTIGD 203

Query: 150 EEEDTAEANEGIHLGNSLESSRERGNSRKRLSKKEKQYTSEGIQNISSYLEDNAEQMTGS 329
            EEDTA  NE IHLG +LESS+ RG+SR+   KK +  +  G  NI S L+DN  Q T S
Sbjct: 204 VEEDTAGRNEDIHLGKTLESSK-RGSSRRGSHKKAEMPSRNG--NIVSQLKDNVAQGTSS 260

Query: 330 DKKERR 347
           D++E+R
Sbjct: 261 DQREKR 266


>gb|ONK77633.1| uncharacterized protein A4U43_C02F8840 [Asparagus officinalis]
          Length = 167

 Score = 69.3 bits (168), Expect = 3e-12
 Identities = 40/75 (53%), Positives = 50/75 (66%)
 Frame = +3

Query: 123 SKMPNVTGDEEEDTAEANEGIHLGNSLESSRERGNSRKRLSKKEKQYTSEGIQNISSYLE 302
           SK PN  GD EEDTA  NE IHLG +LESS+ RG+SR+   KK +  +  G  NI S L+
Sbjct: 10  SKEPNTIGDVEEDTAGRNEDIHLGKTLESSK-RGSSRRGSHKKAEMPSRNG--NIVSQLK 66

Query: 303 DNAEQMTGSDKKERR 347
           DN  Q T SD++E+R
Sbjct: 67  DNVAQGTSSDQREKR 81


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