BLASTX nr result

ID: Ophiopogon22_contig00008609 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00008609
         (357 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020256997.1| GRF1-interacting factor 2-like [Asparagus of...    53   7e-06

>ref|XP_020256997.1| GRF1-interacting factor 2-like [Asparagus officinalis]
 gb|ONK75160.1| uncharacterized protein A4U43_C03F13980 [Asparagus officinalis]
          Length = 213

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 39/104 (37%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
 Frame = +2

Query: 47  GHMGMRP-VGVVNGMHAAPXXXXXXXXXXXXXXXXXXXXXMSEPPRGSTPSSTTDVRGSK 223
           GH GMRP VG +NGMH                         +E P G TPSS  D   + 
Sbjct: 138 GHTGMRPPVGSINGMHTESSHGGGGGS--------------NEAPAG-TPSSKKDAEKAA 182

Query: 224 PDSGNXXXXXXXXXXDSQKNPASERGSGDAAAGANPKRPEGSKT 355
            D               QKN A+E+GSG+A    NP+RPEGSKT
Sbjct: 183 DDG--------------QKNSATEQGSGNAETPPNPQRPEGSKT 212


Top